BLASTX nr result

ID: Mentha22_contig00051304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00051304
         (403 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354078.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    57   3e-06

>ref|XP_006354078.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g66300-like
           [Solanum tuberosum]
          Length = 228

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
 Frame = -3

Query: 401 LSKRWKDLWTTVHCLDFGKVRCD-------FVCGTLVQWKGANKIHKLSITSHSKXXXXX 243
           LSKRW+ LWT++H   F     +       FV   L      +KI K+ +  H +     
Sbjct: 42  LSKRWRYLWTSIHTFLFSNRNYNKLENFISFVDNVLTH-STCSKIKKIKLDFHHRDWKFH 100

Query: 242 XXXXXXXXLAVEKRVEELYI----CLGPRRKVCANQC---LYSCSSLTKLFLGYFVLRVE 84
                     VE +VE++ +    C  P     A +    +Y+CSSL  L+L ++V    
Sbjct: 101 SEISQWLNFTVENKVEDVALDAGLCFYPSADDLAYELPLTMYTCSSLITLYLSHWVFDKG 160

Query: 83  ERVQWNQLKSLTIEDV 36
             + WN LKSLT++ +
Sbjct: 161 LNIAWNSLKSLTLDSI 176


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