BLASTX nr result

ID: Mentha22_contig00050762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00050762
         (446 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006432656.1| hypothetical protein CICLE_v10000333mg [Citr...    59   5e-07
ref|XP_006476243.1| PREDICTED: nuclear pore complex protein Nup9...    57   3e-06
ref|XP_006476241.1| PREDICTED: nuclear pore complex protein Nup9...    57   3e-06
dbj|BAF98996.1| nucleoporin 98 [Daucus carota]                         57   3e-06
ref|XP_007149501.1| hypothetical protein PHAVU_005G075600g [Phas...    56   6e-06
ref|XP_007149500.1| hypothetical protein PHAVU_005G075600g [Phas...    56   6e-06
ref|XP_006439171.1| hypothetical protein CICLE_v10018664mg [Citr...    56   6e-06
ref|XP_006439170.1| hypothetical protein CICLE_v10018664mg [Citr...    56   6e-06

>ref|XP_006432656.1| hypothetical protein CICLE_v10000333mg [Citrus clementina]
           gi|557534778|gb|ESR45896.1| hypothetical protein
           CICLE_v10000333mg [Citrus clementina]
          Length = 793

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 13/102 (12%)
 Frame = -3

Query: 273 GSRVASYSETLE--TGAVNN--GQMKSISAMPQYINTSHEELRVEDYEL-LKESSFP--- 118
           GSR+A+++ T E  TG+ +   G++ SISAMP Y + SHEELR EDY+L  K   FP   
Sbjct: 603 GSRIAAFAPTTEAETGSASQPAGKLDSISAMPAYKDKSHEELRWEDYQLGDKGGPFPPPP 662

Query: 117 --SQYQGIAFQQSSSPFVPHTCRVPSSQ---SSTRGAFSSSP 7
              Q     F  +S+ F P T    SS    S++  AF SSP
Sbjct: 663 SFGQSSASPFSSTSNLFAPKTSTFTSSSFGTSTSTSAFGSSP 704


>ref|XP_006476243.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3
           [Citrus sinensis]
          Length = 998

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 10/98 (10%)
 Frame = -3

Query: 273 GSRVASYSETLE--TGAVNN--GQMKSISAMPQYINTSHEELRVEDYEL-LKESSFPSQY 109
           GSR+A+Y+ T E  TG+ +   G+++SISAMP Y + SHEELR EDY+L  K    P+  
Sbjct: 326 GSRIATYAPTTEAETGSASQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPLPAGQ 385

Query: 108 Q--GIAFQQS---SSPFVPHTCRVPSSQSSTRGAFSSS 10
              GI F  S   SSPF P     P+   S+   FSSS
Sbjct: 386 SAGGIGFGASAAPSSPFAPS----PAFGQSSASPFSSS 419


>ref|XP_006476241.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
           [Citrus sinensis] gi|568844741|ref|XP_006476242.1|
           PREDICTED: nuclear pore complex protein Nup98-Nup96-like
           isoform X2 [Citrus sinensis]
          Length = 1009

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 10/98 (10%)
 Frame = -3

Query: 273 GSRVASYSETLE--TGAVNN--GQMKSISAMPQYINTSHEELRVEDYEL-LKESSFPSQY 109
           GSR+A+Y+ T E  TG+ +   G+++SISAMP Y + SHEELR EDY+L  K    P+  
Sbjct: 326 GSRIATYAPTTEAETGSASQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPLPAGQ 385

Query: 108 Q--GIAFQQS---SSPFVPHTCRVPSSQSSTRGAFSSS 10
              GI F  S   SSPF P     P+   S+   FSSS
Sbjct: 386 SAGGIGFGASAAPSSPFAPS----PAFGQSSASPFSSS 419


>dbj|BAF98996.1| nucleoporin 98 [Daucus carota]
          Length = 1005

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
 Frame = -3

Query: 273 GSRVASYSETLE----TGAVNNGQMKSISAMPQYINTSHEELRVEDYELLKESSFPSQYQ 106
           GSRVA+Y+ T E    TG    G+++SISAMP Y + SHEELR EDY+L  +    S  Q
Sbjct: 321 GSRVAAYTPTAEADAGTGTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNSAAQ 380

Query: 105 GIAFQQSSSPFVPHTCRVPSSQSSTRGAFSSSPAN 1
                  ++ F  +T   P S SST G  +S+PAN
Sbjct: 381 ----PAGAAGFGTNTQPNPFSSSSTFGQ-ASAPAN 410


>ref|XP_007149501.1| hypothetical protein PHAVU_005G075600g [Phaseolus vulgaris]
           gi|561022765|gb|ESW21495.1| hypothetical protein
           PHAVU_005G075600g [Phaseolus vulgaris]
          Length = 1041

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
 Frame = -3

Query: 273 GSRVASYSETLETGAVNNGQ---MKSISAMPQYINTSHEELRVEDYEL-LKESSFPS-QY 109
           GSRVASY+ T E  +  +GQ   ++SISAMP Y + SHEELR EDY+L  K    PS Q 
Sbjct: 348 GSRVASYTATTEADSGTSGQTAKLESISAMPVYKDKSHEELRWEDYQLGDKGGPLPSGQS 407

Query: 108 QGIAFQQSSSPFVPHTCRVPSSQSSTRGAFSSSPAN 1
            G+A   SS+         P    S+   FSS+  N
Sbjct: 408 TGLAGFSSSTTQTNAFSPSPVFGQSSANPFSSTTPN 443


>ref|XP_007149500.1| hypothetical protein PHAVU_005G075600g [Phaseolus vulgaris]
           gi|561022764|gb|ESW21494.1| hypothetical protein
           PHAVU_005G075600g [Phaseolus vulgaris]
          Length = 1044

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
 Frame = -3

Query: 273 GSRVASYSETLETGAVNNGQ---MKSISAMPQYINTSHEELRVEDYEL-LKESSFPS-QY 109
           GSRVASY+ T E  +  +GQ   ++SISAMP Y + SHEELR EDY+L  K    PS Q 
Sbjct: 351 GSRVASYTATTEADSGTSGQTAKLESISAMPVYKDKSHEELRWEDYQLGDKGGPLPSGQS 410

Query: 108 QGIAFQQSSSPFVPHTCRVPSSQSSTRGAFSSSPAN 1
            G+A   SS+         P    S+   FSS+  N
Sbjct: 411 TGLAGFSSSTTQTNAFSPSPVFGQSSANPFSSTTPN 446


>ref|XP_006439171.1| hypothetical protein CICLE_v10018664mg [Citrus clementina]
           gi|557541433|gb|ESR52411.1| hypothetical protein
           CICLE_v10018664mg [Citrus clementina]
          Length = 1006

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 10/98 (10%)
 Frame = -3

Query: 273 GSRVASYSETLE--TGAVNN--GQMKSISAMPQYINTSHEELRVEDYEL-LKESSFPSQY 109
           GSR+A+Y+ T E  TG+ +   G+++SIS+MP Y + SHEELR EDY+L  K    P+  
Sbjct: 334 GSRIAAYAPTTEAETGSASQPAGKLESISSMPVYKDKSHEELRWEDYQLGDKGGPLPAGQ 393

Query: 108 Q--GIAFQQS---SSPFVPHTCRVPSSQSSTRGAFSSS 10
              GI F  S   SSPF P     P+   S+   FSSS
Sbjct: 394 SAGGIGFGASAAPSSPFAPS----PAFGQSSASPFSSS 427


>ref|XP_006439170.1| hypothetical protein CICLE_v10018664mg [Citrus clementina]
           gi|557541432|gb|ESR52410.1| hypothetical protein
           CICLE_v10018664mg [Citrus clementina]
          Length = 1017

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 10/98 (10%)
 Frame = -3

Query: 273 GSRVASYSETLE--TGAVNN--GQMKSISAMPQYINTSHEELRVEDYEL-LKESSFPSQY 109
           GSR+A+Y+ T E  TG+ +   G+++SIS+MP Y + SHEELR EDY+L  K    P+  
Sbjct: 334 GSRIAAYAPTTEAETGSASQPAGKLESISSMPVYKDKSHEELRWEDYQLGDKGGPLPAGQ 393

Query: 108 Q--GIAFQQS---SSPFVPHTCRVPSSQSSTRGAFSSS 10
              GI F  S   SSPF P     P+   S+   FSSS
Sbjct: 394 SAGGIGFGASAAPSSPFAPS----PAFGQSSASPFSSS 427


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