BLASTX nr result

ID: Mentha22_contig00049290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00049290
         (776 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]    71   4e-10
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...    67   7e-09
emb|CAN77012.1| hypothetical protein VITISV_036882 [Vitis vinifera]    65   3e-08
emb|CAN78706.1| hypothetical protein VITISV_028658 [Vitis vinifera]    64   6e-08
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]    64   8e-08
ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255...    60   7e-07
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    59   2e-06
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    57   6e-06
emb|CAN73049.1| hypothetical protein VITISV_009802 [Vitis vinifera]    57   6e-06
ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266...    57   1e-05

>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 48/147 (32%), Positives = 65/147 (44%), Gaps = 28/147 (19%)
 Frame = +1

Query: 205 LCFITDHTADKCWHRFEPHFVPRXXXXXXXXXXXMPYN---PGL------NMAQSSIPXX 357
           LC    HT  +C++R++P+F              MP N   PG+      N A  SI   
Sbjct: 185 LCNKFGHTVHRCFYRYDPNF-----------HGNMPANGPTPGVLGSGARNGASGSISSA 233

Query: 358 XXXXXXXXXXXEHT-------------------WYPDSGATNHVSNDLANLNIVSEYRGP 480
                      E+                    W+PDSGATNHV++DL NLN  +EY G 
Sbjct: 234 GNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGN 293

Query: 481 NRLQMGNGYGVDIAHIGYQEGPSQGYP 561
           +++ MGNG G+ I+HIG    PS   P
Sbjct: 294 SKIHMGNGTGLKISHIGLSVFPSSSSP 320


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
 Frame = +1

Query: 205 LCFITDHTADKCWHRFEPHFVPRXXXXXXXXXXXMPYNPGLNMAQSSIPXXXXXXXXXXX 384
           +C    H A +CWHRF+  F P+                  N   SS             
Sbjct: 316 ICCKIGHVATECWHRFDNQFQPKASHS--------------NQFSSSAQDPQALMAAPGL 361

Query: 385 XXEHTWYPDSGATNHVSNDLANLNIVSEYRGPNRLQMGNGYGVDIAHIGYQEGP-SQG 555
             E  W+ D+GAT+HV++DLANL++ + + G +++ +GNG G+ + H G+   P SQG
Sbjct: 362 LGETPWFLDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHSSIPTSQG 419


>emb|CAN77012.1| hypothetical protein VITISV_036882 [Vitis vinifera]
          Length = 618

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 27/47 (57%), Positives = 35/47 (74%)
 Frame = +1

Query: 391 EHTWYPDSGATNHVSNDLANLNIVSEYRGPNRLQMGNGYGVDIAHIG 531
           +  W+PDSGATNH +ND  NLNI ++Y+G  +  MGNG G+DI HIG
Sbjct: 16  DKAWFPDSGATNHFTNDFNNLNIGTKYQGNKKRNMGNGAGLDILHIG 62


>emb|CAN78706.1| hypothetical protein VITISV_028658 [Vitis vinifera]
          Length = 780

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 29/53 (54%), Positives = 37/53 (69%)
 Frame = +1

Query: 403 YPDSGATNHVSNDLANLNIVSEYRGPNRLQMGNGYGVDIAHIGYQEGPSQGYP 561
           +PDSGATNHV++DL NLN   EY G +++ MGNG G +I+HIG    PS   P
Sbjct: 351 FPDSGATNHVTHDLGNLNSGVEYNGNSKIHMGNGTGPEISHIGLSIFPSSSSP 403


>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
          Length = 955

 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = +1

Query: 400 WYPDSGATNHVSNDLANLNIVSEYRGPNRLQMGNGYGVDIAHIGYQEGPSQGYP 561
           W+PDS ATNHV++DL NLN  +EY G +++ MGN  G+ I+HIG    PS   P
Sbjct: 269 WFPDSRATNHVTHDLGNLNSGAEYNGNSKIHMGNETGLKISHIGLSVFPSSSSP 322


>ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255439 [Solanum
           lycopersicum]
          Length = 318

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 37/115 (32%), Positives = 52/115 (45%)
 Frame = +1

Query: 205 LCFITDHTADKCWHRFEPHFVPRXXXXXXXXXXXMPYNPGLNMAQSSIPXXXXXXXXXXX 384
           +C   DH A  C++R+   + P                P  N+A SS             
Sbjct: 216 ICEKLDHLAKNCYNRYNDQYPPTNTP-----------RPQANVATSS-----------SA 253

Query: 385 XXEHTWYPDSGATNHVSNDLANLNIVSEYRGPNRLQMGNGYGVDIAHIGYQEGPS 549
             + +W  DSGATNHV+ D+ NL+I S+Y G + L +GNG  + I H G    PS
Sbjct: 254 FLDPSWCLDSGATNHVTADVGNLSIASDYSGNDSLAVGNGSQLHITHFGSSSIPS 308


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
 Frame = +1

Query: 205 LCFITDHTADKCWHRFEPHF-VPRXXXXXXXXXXXMPYNPGLNMAQSSIPXXXXXXXXXX 381
           LC    H   +C++RF+  F VP+              N       S  P          
Sbjct: 312 LCGKIGHVVAQCYYRFDHTFQVPQNLSSR---------NSSPRAYYSFSPQVNGVIPTSE 362

Query: 382 XXXEHTWYPDSGATNHVSNDLANLNIVSEYRGPNRLQMGNGYGVDIAHIGYQE 540
              +  WYPDSGA+NHV+ +  NL   +E+ G N++ +GNG G+ I HIG  E
Sbjct: 363 VFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGTGLSIKHIGQSE 415


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
 Frame = +1

Query: 205 LCFITDHTADKCWHRFEPHFVPRXXXXXXXXXXXMPYNPGLNMAQSSIPXXXXXXXXXXX 384
           +C    HTA  CW+RF+ ++VP               N   +   S++P           
Sbjct: 284 VCSRVGHTALNCWYRFDENYVPDQRSA----------NSAAHQNGSNVP----------- 322

Query: 385 XXEHTWYPDSGATNHVSNDLANLNIVSEYRGPNRLQMGNGYGVDIAHIGYQEGP--SQGY 558
                WY D+GAT+H++ DL  L +  +Y G +++   NG G+ I++IG    P  S+  
Sbjct: 323 -----WYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGTGMTISNIGNAIVPTSSRSL 377

Query: 559 P*RRIVHV 582
             R ++HV
Sbjct: 378 HLRSVLHV 385


>emb|CAN73049.1| hypothetical protein VITISV_009802 [Vitis vinifera]
          Length = 220

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
 Frame = +1

Query: 391 EHTWYPDSGATNHVSNDLANLNIVSEYRGPNRLQMGNGYGVDIAHIGYQEGP---SQGY 558
           + +WY DSGA NHV  +L NL++ S+Y   N+L +GNG  + I H+G  E P   SQ Y
Sbjct: 73  DQSWYADSGAANHVIAELGNLSMKSDYHDENKLAVGNGNKLSITHVGPTEXPFLSSQXY 131


>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
           lycopersicum]
          Length = 544

 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 23/47 (48%), Positives = 36/47 (76%)
 Frame = +1

Query: 391 EHTWYPDSGATNHVSNDLANLNIVSEYRGPNRLQMGNGYGVDIAHIG 531
           +++W+ DSGATNHV++DL+ L+I  +Y G ++L +GNG  + I HIG
Sbjct: 340 DNSWFADSGATNHVTSDLSQLSIHMDYNGEDQLALGNGQKLSINHIG 386


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