BLASTX nr result
ID: Mentha22_contig00048477
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00048477
(330 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi... 80 1e-20
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 69 2e-20
emb|CAN65213.1| hypothetical protein VITISV_009492 [Vitis vinifera] 64 3e-18
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera] 63 8e-18
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 64 2e-17
ref|XP_007017134.1| Cysteine-rich RLK (RECEPTOR-like protein kin... 65 3e-17
gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastig... 66 3e-17
ref|XP_004137293.1| PREDICTED: uncharacterized mitochondrial pro... 66 3e-17
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera] 67 4e-17
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 67 5e-17
ref|NP_194047.2| cysteine-rich receptor-like protein kinase 8 [A... 63 5e-17
emb|CAA18463.1| putative protein [Arabidopsis thaliana] gi|72691... 63 5e-17
emb|CAN76400.1| hypothetical protein VITISV_001550 [Vitis vinifera] 70 5e-17
dbj|BAB11447.1| polyprotein-like [Arabidopsis thaliana] 72 1e-16
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf... 80 1e-16
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 67 1e-16
ref|XP_004294137.1| PREDICTED: uncharacterized mitochondrial pro... 63 1e-16
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 68 2e-16
gb|EXC35359.1| Retrovirus-related Pol polyprotein from transposo... 70 2e-16
gb|AAD25830.1| putative retroelement pol polyprotein [Arabidopsi... 61 2e-16
>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
gi|7267797|emb|CAB81200.1| putative retrotransposon
polyprotein [Arabidopsis thaliana]
Length = 1203
Score = 80.5 bits (197), Expect(2) = 1e-20
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = -1
Query: 330 MDSHAHLQHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAA 151
MD + HL L + SY L+GRLLYLCITRPDI+FAV+TLSQFL++P H QAA
Sbjct: 797 MDPNLHLTKEMGTLLPNATSYRELVGRLLYLCITRPDITFAVHTLSQFLSAPTDIHMQAA 856
Query: 150 YRVLKYLR 127
++VL+YL+
Sbjct: 857 HKVLRYLK 864
Score = 44.7 bits (104), Expect(2) = 1e-20
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+G G GL YS +S L + F+DAD+G+ +RRSV+GFC++L
Sbjct: 864 KGNPGQGLMYSASSELCLNGFSDADWGTCKDSRRSVTGFCIYL 906
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 68.9 bits (167), Expect(2) = 2e-20
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = -1
Query: 330 MDSHAHLQHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAA 151
MD H + ++ Y RLIGRL+YL ITRPDI+FAVN L+QF +P + H QA
Sbjct: 1073 MDPSMVFAHDSGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAV 1132
Query: 150 YRVLKYLR 127
Y++L+Y++
Sbjct: 1133 YKILQYIK 1140
Score = 55.5 bits (132), Expect(2) = 2e-20
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+GT+G GLFYS TS L+ ++A+ADY S +RRS SG+C+FL
Sbjct: 1140 KGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFL 1182
>emb|CAN65213.1| hypothetical protein VITISV_009492 [Vitis vinifera]
Length = 659
Score = 63.5 bits (153), Expect(2) = 3e-18
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = -1
Query: 330 MDSHAHLQHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAA 151
M++ +L + L D Y RLIG+LLYL ITR D++++VN L Q+LA+P H Q
Sbjct: 539 MEAKINLSQDDGELLEDPNLYRRLIGKLLYLTITRLDLAYSVNCLGQYLANPRSTHLQGV 598
Query: 150 YRVLKYLR 127
+R+L+Y++
Sbjct: 599 HRILQYIK 606
Score = 53.5 bits (127), Expect(2) = 3e-18
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+G VG GL++S TSS+ + D+D+G+Y RRS+SGFC+FL
Sbjct: 606 KGIVGQGLYFSTTSSIRRKVLIDSDWGAYKDMRRSISGFCVFL 648
>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
Length = 970
Score = 63.2 bits (152), Expect(2) = 8e-18
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = -1
Query: 288 LTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAAYRVLKYLR 127
L D Y R+IG+LLYL ITR D+SF+VN LSQF A P H QAAY +L+Y++
Sbjct: 760 LDDPSMYRRMIGKLLYLTITRLDLSFSVNRLSQFHAKPRIPHLQAAYHILQYVK 813
Score = 52.8 bits (125), Expect(2) = 8e-18
Identities = 22/43 (51%), Positives = 34/43 (79%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+ TVG GLFYS++S++E FAD+D+ + T+RS+SGFC+F+
Sbjct: 813 KATVGQGLFYSSSSAIELKAFADSDWAACPDTKRSISGFCVFI 855
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 64.3 bits (155), Expect(2) = 2e-17
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = -1
Query: 309 QHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAAYRVLKYL 130
QH + + + + Y RL+G+L+YL ITRPDI++A+N L QF +SP H +AA +V+ YL
Sbjct: 1240 QHNDEHVIDNPEVYRRLVGKLMYLTITRPDITYAINRLCQFSSSPKNSHLKAAQKVVHYL 1299
Query: 129 RVQLAL 112
+ + L
Sbjct: 1300 KGTIGL 1305
Score = 50.4 bits (119), Expect(2) = 2e-17
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+GT+G GLFYS+ S L + DAD+GS +RRS SG C+FL
Sbjct: 1300 KGTIGLGLFYSSKSDLCLKAYTDADWGSCVDSRRSTSGICMFL 1342
>ref|XP_007017134.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8, putative
[Theobroma cacao] gi|508722462|gb|EOY14359.1|
Cysteine-rich RLK (RECEPTOR-like protein kinase) 8,
putative [Theobroma cacao]
Length = 442
Score = 65.1 bits (157), Expect(2) = 3e-17
Identities = 30/66 (45%), Positives = 46/66 (69%)
Frame = -1
Query: 324 SHAHLQHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAAYR 145
+H + T+ L + +Y +L+G+LLYL +RPDIS+AV+ LSQ++ P Q H AA+R
Sbjct: 232 NHRLNKATDTDQLANATNYRQLVGKLLYLTFSRPDISYAVHILSQYMDKPTQSHLHAAFR 291
Query: 144 VLKYLR 127
VLKY++
Sbjct: 292 VLKYIK 297
Score = 48.9 bits (115), Expect(2) = 3e-17
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+G G G+ S+ SSL+ ++D+D+G Y TRRSV+GFC+FL
Sbjct: 297 KGAPGKGILLSSRSSLQLKAYSDSDWGGYPDTRRSVTGFCVFL 339
>gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastigiata]
Length = 383
Score = 66.2 bits (160), Expect(2) = 3e-17
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = -1
Query: 330 MDSHAHLQHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAA 151
MD+ L + +P L D Y RL+G+L+YL TRPD++++V+ LSQF+ P + H AA
Sbjct: 155 MDTKHKLSLSTSPLLEDPAPYRRLVGQLIYLTNTRPDLAYSVHILSQFMNKPTEDHLAAA 214
Query: 150 YRVLKYLR 127
+RVL+YL+
Sbjct: 215 HRVLRYLK 222
Score = 47.8 bits (112), Expect(2) = 3e-17
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+G G+FY + +L+ S+F DAD+GS +TRRSVSG C+ L
Sbjct: 222 KGCPAQGVFYPSNQTLQLSVFCDADWGSCPLTRRSVSGCCVLL 264
>ref|XP_004137293.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Cucumis sativus] gi|449472533|ref|XP_004153623.1|
PREDICTED: uncharacterized mitochondrial protein
AtMg00810-like [Cucumis sativus]
gi|449473152|ref|XP_004153801.1| PREDICTED:
uncharacterized mitochondrial protein AtMg00810-like
[Cucumis sativus]
Length = 234
Score = 65.9 bits (159), Expect(2) = 3e-17
Identities = 32/68 (47%), Positives = 46/68 (67%)
Frame = -1
Query: 330 MDSHAHLQHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAA 151
MD L+ + L D +Y RL+G+LLYL I+RPDI+FAV+ LSQF+A P + H AA
Sbjct: 1 MDPTVKLKGSGKEPLKDPTAYRRLVGKLLYLTISRPDITFAVHKLSQFMAHPDKTHMDAA 60
Query: 150 YRVLKYLR 127
+L+Y++
Sbjct: 61 NHLLRYIK 68
Score = 48.1 bits (113), Expect(2) = 3e-17
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+G+ G G+F + T L F DAD+GS TRRSV+GFC+FL
Sbjct: 68 KGSPGQGIFMAKTDDLSFQAFVDADWGSCPDTRRSVTGFCVFL 110
>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
Length = 1031
Score = 67.4 bits (163), Expect(2) = 4e-17
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -1
Query: 330 MDSHAHLQHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAA 151
M + L + LTD Y RLIG+L+YL ITRP++++++N L QFL+ P + H QA
Sbjct: 770 MQLNMQLSQDDGELLTDPNMYRRLIGKLIYLTITRPNLTYSMNKLIQFLSQPRRPHLQAV 829
Query: 150 YRVLKYLR 127
YR+L+Y++
Sbjct: 830 YRILQYIK 837
Score = 46.2 bits (108), Expect(2) = 4e-17
Identities = 19/43 (44%), Positives = 33/43 (76%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+G+ G G+F+S +SSL+ F+D+D+ + +R+SV+GFC+FL
Sbjct: 837 KGSPGKGIFFSASSSLQLKAFSDSDWAACPDSRKSVTGFCIFL 879
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 67.4 bits (163), Expect(2) = 5e-17
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = -1
Query: 330 MDSHAHLQHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAA 151
M+ + L + + L D Y RL+GRL+YL +TRPDI ++V TLSQF+ +P + H +AA
Sbjct: 1487 MEQNLKLTNEDGELLHDPSRYRRLVGRLIYLTVTRPDIVYSVRTLSQFMNTPRKPHWEAA 1546
Query: 150 YRVLKYLR 127
RVL+Y++
Sbjct: 1547 LRVLRYIK 1554
Score = 45.8 bits (107), Expect(2) = 5e-17
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+G+ G GLF + ++L S F D+D+G ++RRSVSG+C+FL
Sbjct: 1554 KGSPGQGLFLPSENNLTLSAFCDSDWGGCRMSRRSVSGYCVFL 1596
>ref|NP_194047.2| cysteine-rich receptor-like protein kinase 8 [Arabidopsis thaliana]
gi|332659317|gb|AEE84717.1| cysteine-rich receptor-like
protein kinase 8 [Arabidopsis thaliana]
Length = 1262
Score = 62.8 bits (151), Expect(2) = 5e-17
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = -1
Query: 282 DIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAAYRVLKYLR 127
D K+Y RLIGRL+YL ITR DISFAVN LSQF +P H QA ++L Y++
Sbjct: 374 DAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIK 425
Score = 50.4 bits (119), Expect(2) = 5e-17
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+GTVG GLFYS+ + ++ +F+DA + S TRRS +G+C+FL
Sbjct: 425 KGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
>emb|CAA18463.1| putative protein [Arabidopsis thaliana] gi|7269163|emb|CAB79271.1|
putative protein [Arabidopsis thaliana]
Length = 1240
Score = 62.8 bits (151), Expect(2) = 5e-17
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = -1
Query: 282 DIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAAYRVLKYLR 127
D K+Y RLIGRL+YL ITR DISFAVN LSQF +P H QA ++L Y++
Sbjct: 374 DAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIK 425
Score = 50.4 bits (119), Expect(2) = 5e-17
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+GTVG GLFYS+ + ++ +F+DA + S TRRS +G+C+FL
Sbjct: 425 KGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
>emb|CAN76400.1| hypothetical protein VITISV_001550 [Vitis vinifera]
Length = 626
Score = 70.5 bits (171), Expect(2) = 5e-17
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = -1
Query: 330 MDSHAHLQHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAA 151
+D L+ N A D + Y L+GRL+YL TRPDI++AV+ +SQF+ SP + H Q A
Sbjct: 418 IDPILRLREAENDATVDKEMYQHLVGRLIYLSHTRPDIAYAVSVISQFMHSPKESHLQVA 477
Query: 150 YRVLKYLR 127
YRVL+YL+
Sbjct: 478 YRVLQYLK 485
Score = 42.7 bits (99), Expect(2) = 5e-17
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+GT G G+ + L + DADY S I RRS SG+C FL
Sbjct: 485 KGTPGKGILFKRNGGLVLEAYTDADYASSIIDRRSTSGYCTFL 527
>dbj|BAB11447.1| polyprotein-like [Arabidopsis thaliana]
Length = 509
Score = 71.6 bits (174), Expect(2) = 1e-16
Identities = 37/68 (54%), Positives = 45/68 (66%)
Frame = -1
Query: 330 MDSHAHLQHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAA 151
MD L L D + Y LIGRLLYLC+TRPDI+FAV+ LSQFL+ P H AA
Sbjct: 258 MDPKVVLTKDLGTLLEDGRPYRELIGRLLYLCVTRPDITFAVHNLSQFLSCPTNVHLHAA 317
Query: 150 YRVLKYLR 127
++VLKYL+
Sbjct: 318 HQVLKYLK 325
Score = 40.4 bits (93), Expect(2) = 1e-16
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 118 GTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
G GLF S + L + FADAD+G+ +RRSVSG C+FL
Sbjct: 329 GQGLFSSAGTELYLNGFADADWGTCLDSRRSVSGVCVFL 367
>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
11.19) [Arabidopsis thaliana]
Length = 1633
Score = 80.5 bits (197), Expect(2) = 1e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = -1
Query: 330 MDSHAHLQHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAA 151
MD + HL L + SY L+GRLLYLCITRPDI+FAV+TLSQFL++P H QAA
Sbjct: 1211 MDPNLHLTKEMGTLLPNATSYRELVGRLLYLCITRPDITFAVHTLSQFLSAPTDIHMQAA 1270
Query: 150 YRVLKYLR 127
++VL+YL+
Sbjct: 1271 HKVLRYLK 1278
Score = 31.2 bits (69), Expect(2) = 1e-16
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = -3
Query: 64 DADYGSYTITRRSVSGFCLFL 2
DAD+G+ +RRSV+GFC++L
Sbjct: 1284 DADWGTCKDSRRSVTGFCIYL 1304
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 66.6 bits (161), Expect(2) = 1e-16
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = -1
Query: 330 MDSHAHLQHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAA 151
+D L + LTD SY +L+G+L+YL ITRPDI++AVNTL QF +P H A
Sbjct: 1189 LDPSVKLNKEDGVPLTDSTSYRKLVGKLMYLQITRPDIAYAVNTLCQFSHAPTSVHLSAV 1248
Query: 150 YRVLKYLR 127
++VL+YL+
Sbjct: 1249 HKVLRYLK 1256
Score = 45.1 bits (105), Expect(2) = 1e-16
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+GTVG GLFYS + + D+D+GS T +RR V+ +C+F+
Sbjct: 1256 KGTVGQGLFYSADDKFDLRGYTDSDFGSCTDSRRCVAAYCMFI 1298
>ref|XP_004294137.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Fragaria vesca subsp. vesca]
Length = 331
Score = 62.8 bits (151), Expect(2) = 1e-16
Identities = 27/54 (50%), Positives = 41/54 (75%)
Frame = -1
Query: 288 LTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAAYRVLKYLR 127
L D Y RL+GRL+YL ++RPDI++AV+ LS+F+ P + H +AA RV++YL+
Sbjct: 103 LRDPSRYRRLVGRLIYLTVSRPDITYAVHVLSRFMHQPRKSHMEAALRVIRYLK 156
Score = 48.9 bits (115), Expect(2) = 1e-16
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+G G GLF+S+TS L+ + D+D+G +TRRS +G+C+FL
Sbjct: 156 KGAPGQGLFFSSTSDLKLRAYCDSDWGDCPLTRRSTTGYCVFL 198
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 68.2 bits (165), Expect(2) = 2e-16
Identities = 30/54 (55%), Positives = 42/54 (77%)
Frame = -1
Query: 288 LTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAAYRVLKYLR 127
+ DI+ Y R++G+L+YL ITRPDI+FAVN L QF ++P H AAYRVL+Y++
Sbjct: 1226 IEDIEQYRRIVGKLMYLTITRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIK 1279
Score = 43.1 bits (100), Expect(2) = 2e-16
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+GTVG GLFYS +S L FAD+D+ S +RRS + F +F+
Sbjct: 1279 KGTVGQGLFYSASSDLTLKGFADSDWASCQDSRRSTTSFTMFV 1321
>gb|EXC35359.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 3263
Score = 70.1 bits (170), Expect(2) = 2e-16
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = -1
Query: 330 MDSHAHLQHTNNPALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAA 151
MDS L A D Y RL+GRL+YL TRPDI FAV+ +SQF+ SP + H +A
Sbjct: 1245 MDSQKKLGTEKESAPVDRGRYQRLVGRLIYLSHTRPDIGFAVSVVSQFMHSPTEEHMEAV 1304
Query: 150 YRVLKYLRV 124
YRVL+YL++
Sbjct: 1305 YRVLRYLKM 1313
Score = 40.8 bits (94), Expect(2) = 2e-16
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -3
Query: 124 TVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
T G GLF+ T + +++DAD+ I RRS SG+C F+
Sbjct: 1314 TPGKGLFFIKTENRNTEVYSDADWAGNLIDRRSTSGYCSFV 1354
>gb|AAD25830.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1015
Score = 61.2 bits (147), Expect(2) = 2e-16
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = -1
Query: 294 PALTDIKSYIRLIGRLLYLCITRPDISFAVNTLSQFLASPHQHHTQAAYRVLKYLR 127
P + D SY RL+G+L+YL ITRP+I++A+N L QF ++P H +A +VL+Y++
Sbjct: 856 PVINDSASYRRLVGKLMYLTITRPEITYAMNKLCQFTSAPKGSHMKAILKVLQYIK 911
Score = 49.7 bits (117), Expect(2) = 2e-16
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = -3
Query: 130 QGTVGTGLFYSNTSSLEPSIFADADYGSYTITRRSVSGFCLFL 2
+GT+G GLFYS TS F DAD+ S +RRS SG+C+FL
Sbjct: 911 KGTIGNGLFYSATSDFVLKGFTDADWASCRDSRRSTSGYCMFL 953