BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00045883
         (823 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   138   7e-49
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   102   7e-24
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                 92   2e-21
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]                92   2e-21
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         92   3e-21
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...    91   7e-21
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]      91   7e-21
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    84   7e-21
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      87   4e-20
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]          89   5e-20
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]            89   5e-20
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...    88   2e-19
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    86   1e-18
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...    86   1e-18
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote...    88   8e-18
emb|CAN81927.1| hypothetical protein VITISV_025281 [Vitis vinifera]    88   7e-17
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         76   1e-16
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...    86   1e-16
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...    86   1e-16
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]      81   2e-16

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  138 bits (347), Expect(2) = 7e-49
 Identities = 70/105 (66%), Positives = 86/105 (81%)
 Frame = -2

Query: 534 REYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLS 355
           RE+F+TY+Q+DGG++SMA++ V KVVG GSI+IRT DG FCTL+EV HVP MTKNLISLS
Sbjct: 293 REWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLS 352

Query: 354 LLDIKGFSFKG*CGAMYVRNGSKVILTGLKRGTLYTLQGSTMTGT 220
           LLD KGFS+ G  G + V  GS +IL G+ RGTLY LQGST+TG+
Sbjct: 353 LLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTGS 397



 Score = 83.6 bits (205), Expect(2) = 7e-49
 Identities = 39/75 (52%), Positives = 44/75 (58%)
 Frame = -3

Query: 755 DICNYCKEPGHWKNDCLXXXXXXXXXXXXXXXXXXXXADTNSEEDLVLVAKEQSHRNDVW 576
           D+CNYCKE GHWK DC                      DTNSEED+ LVA E +H +DVW
Sbjct: 223 DVCNYCKEKGHWKFDC---PKKKKQSEKQSVSAAVAEEDTNSEEDIALVADEHTHHSDVW 279

Query: 575 VLDSRASYHLCPNTE 531
           VLDS ASYH+CP  E
Sbjct: 280 VLDSGASYHICPRRE 294


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  102 bits (254), Expect(2) = 7e-24
 Identities = 51/112 (45%), Positives = 73/112 (65%), Gaps = 1/112 (0%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           +R++F+TY+ + GGNV M DN   KV G+G+I+I+  DG   TLS+V H+P + +NLISL
Sbjct: 255 NRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISL 314

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 205
           S LD KG+ + G  G + V  GS V++   +K   LY LQG+T+ G    VT
Sbjct: 315 STLDRKGYRYSGGDGILKVTKGSLVVMKADIKNADLYHLQGTTIVGNVAAVT 366



 Score = 35.4 bits (80), Expect(2) = 7e-24
 Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 7/80 (8%)
 Frame = -3

Query: 749 CNYCKEPGHWKNDCLXXXXXXXXXXXXXXXXXXXXA-------DTNSEEDLVLVAKEQSH 591
           C YCK  GH  +DC                             D   + +L++       
Sbjct: 178 CKYCKRGGHDISDCWKLQNKEKHKGNYKPKGKQEEQGKAAVATDNKPDAELLVAYAGCVQ 237

Query: 590 RNDVWVLDSRASYHLCPNTE 531
            +D W+LD+  +YH+CPN +
Sbjct: 238 TSDEWLLDTGCTYHMCPNRD 257


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score = 92.4 bits (228), Expect(2) = 2e-21
 Identities = 45/112 (40%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           +R++F+TY+ + GG V M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL
Sbjct: 298 NRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISL 357

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 205
             LD KG+ + G  G + V  GS V++   +K   LY LQG+T+ G    V+
Sbjct: 358 CTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVS 409



 Score = 37.0 bits (84), Expect(2) = 2e-21
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
 Frame = -3

Query: 749 CNYCKEPGHWKNDCLXXXXXXXXXXXXXXXXXXXXA-------DTNSEEDLVLVAKEQSH 591
           C YCK  GH  + C                             D  S+ +L++     + 
Sbjct: 221 CKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQ 280

Query: 590 RNDVWVLDSRASYHLCPNTE 531
            +D W+LD+  +YH+CPN +
Sbjct: 281 TSDQWILDTACTYHMCPNRD 300


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score = 92.4 bits (228), Expect(2) = 2e-21
 Identities = 45/112 (40%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           +R++F+TY+ + GG V M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL
Sbjct: 130 NRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISL 189

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 205
             LD KG+ + G  G + V  GS V++   +K   LY LQG+T+ G    V+
Sbjct: 190 CTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQGTTILGNVATVS 241



 Score = 37.0 bits (84), Expect(2) = 2e-21
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
 Frame = -3

Query: 749 CNYCKEPGHWKNDCLXXXXXXXXXXXXXXXXXXXXA-------DTNSEEDLVLVAKEQSH 591
           C YCK  GH  + C                             D  S+ +L++     + 
Sbjct: 53  CKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDAELLVAYAGCAQ 112

Query: 590 RNDVWVLDSRASYHLCPNTE 531
            +D W+LD+  +YH+CPN +
Sbjct: 113 TSDQWILDTACTYHMCPNRD 132


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 92.0 bits (227), Expect(2) = 3e-21
 Identities = 45/112 (40%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           +R++F+TY+ + GG V M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL
Sbjct: 313 NRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISL 372

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 205
             LD KG+ + G  G + V  GS V++   +K   LY LQG+T+ G    V+
Sbjct: 373 CTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGNVATVS 424



 Score = 37.0 bits (84), Expect(2) = 3e-21
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
 Frame = -3

Query: 749 CNYCKEPGHWKNDCLXXXXXXXXXXXXXXXXXXXXA-------DTNSEEDLVLVAKEQSH 591
           C YCK  GH  + C                             D  S+ +L++     + 
Sbjct: 236 CKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQ 295

Query: 590 RNDVWVLDSRASYHLCPNTE 531
            +D W+LD+  +YH+CPN +
Sbjct: 296 TSDQWILDTACTYHMCPNRD 315


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score = 90.9 bits (224), Expect(2) = 7e-21
 Identities = 45/112 (40%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           +R++F+TY+ L GG V M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL
Sbjct: 348 NRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISL 407

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 205
             LD KG+ + G  G + V  GS V++   +K   LY L+G+T+ G    V+
Sbjct: 408 CTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 459



 Score = 37.0 bits (84), Expect(2) = 7e-21
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 7/80 (8%)
 Frame = -3

Query: 749 CNYCKEPGHWKNDCLXXXXXXXXXXXXXXXXXXXXA-------DTNSEEDLVLVAKEQSH 591
           C YCK  GH  ++C                             D  S+ +L++     + 
Sbjct: 271 CKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQ 330

Query: 590 RNDVWVLDSRASYHLCPNTE 531
            +D W+LD+  +YH+CPN +
Sbjct: 331 TSDQWILDTAWTYHMCPNRD 350


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 90.9 bits (224), Expect(2) = 7e-21
 Identities = 45/112 (40%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           +R++F+TY+ L GG V M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL
Sbjct: 348 NRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISL 407

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 205
             LD KG+ + G  G + V  GS V++   +K   LY L+G+T+ G    V+
Sbjct: 408 CTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 459



 Score = 37.0 bits (84), Expect(2) = 7e-21
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 7/80 (8%)
 Frame = -3

Query: 749 CNYCKEPGHWKNDCLXXXXXXXXXXXXXXXXXXXXA-------DTNSEEDLVLVAKEQSH 591
           C YCK  GH  ++C                             D  S+ +L++     + 
Sbjct: 271 CKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQ 330

Query: 590 RNDVWVLDSRASYHLCPNTE 531
            +D W+LD+  +YH+CPN +
Sbjct: 331 TSDQWILDTAWTYHMCPNRD 350


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 83.6 bits (205), Expect(2) = 7e-21
 Identities = 46/111 (41%), Positives = 67/111 (60%)
 Frame = -2

Query: 534 REYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISLS 355
           R++F  +++LDGG V M ++   K VGIGSI++R  DG    L +V +VP++ KNLISL 
Sbjct: 239 RDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLG 298

Query: 354 LLDIKGFSFKG*CGAMYVRNGSKVILTGLKRGTLYTLQGSTMTGTTGNVTS 202
            L+ KG       G +   +G+ V+L G+ +  LY  QGST+ GT    TS
Sbjct: 299 ALESKGLVVTMRDGILKATSGALVMLKGVMKNNLYYYQGSTVVGTVAAATS 349



 Score = 44.3 bits (103), Expect(2) = 7e-21
 Identities = 24/72 (33%), Positives = 32/72 (44%)
 Frame = -3

Query: 755 DICNYCKEPGHWKNDCLXXXXXXXXXXXXXXXXXXXXADTNSEEDLVLVAKEQSHRNDVW 576
           D C +C E GHWK DC                     +D  S+  L+ V+   S   D W
Sbjct: 169 DECAFCHEKGHWKKDC--PKLQKKEKVLQDANVAECKSDVESDISLI-VSLSASLYLDEW 225

Query: 575 VLDSRASYHLCP 540
           +LDS  +YH+CP
Sbjct: 226 ILDSGCTYHMCP 237


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 87.0 bits (214), Expect(2) = 4e-20
 Identities = 43/112 (38%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           +R++F+TY+ + GG V M D+   +V GIG+++I+  DG   TL +V H+P + ++LISL
Sbjct: 222 NRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISL 281

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 205
             LD KG+ + G  G + V  GS V++   +K   LY L+G+T+ G    V+
Sbjct: 282 CTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAAVS 333



 Score = 38.1 bits (87), Expect(2) = 4e-20
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 7/80 (8%)
 Frame = -3

Query: 749 CNYCKEPGHWKNDCLXXXXXXXXXXXXXXXXXXXXA-------DTNSEEDLVLVAKEQSH 591
           C YCK  GH  ++C                             D  S+ +L++     + 
Sbjct: 145 CKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQ 204

Query: 590 RNDVWVLDSRASYHLCPNTE 531
            +D W+LD+  +YH+CPN +
Sbjct: 205 TSDQWILDTACTYHMCPNRD 224


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score = 89.4 bits (220), Expect(2) = 5e-20
 Identities = 44/112 (39%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           +R++F+TY+ + GG V M D+   +V GIG ++I+  DG   TLS+V H+P + ++LISL
Sbjct: 145 NRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISL 204

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 205
             LD KG+ + G  G + V  GS V++   +K   LY L+G+T+ G    V+
Sbjct: 205 CTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 256



 Score = 35.4 bits (80), Expect(2) = 5e-20
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -3

Query: 641 DTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNTE 531
           D  S+ +L++     +  +D W+LD+  +YH+CPN +
Sbjct: 111 DEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRD 147


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score = 89.4 bits (220), Expect(2) = 5e-20
 Identities = 44/112 (39%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           +R++F+TY+ + GG V M D+   +V GIG ++I+  DG   TLS+V H+P + ++LISL
Sbjct: 145 NRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISL 204

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 205
             LD KG+ + G  G + V  GS V++   +K   LY L+G+T+ G    V+
Sbjct: 205 CTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 256



 Score = 35.4 bits (80), Expect(2) = 5e-20
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -3

Query: 641 DTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNTE 531
           D  S+ +L++     +  +D W+LD+  +YH+CPN +
Sbjct: 111 DEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRD 147


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score = 88.2 bits (217), Expect(2) = 2e-19
 Identities = 43/112 (38%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           +R++F+TY+ + GG V M D+   +V GIG+++I+  DG   TLS+V H+P + ++LIS 
Sbjct: 279 NRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISF 338

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 205
             LD KG+ + G  G + V  GS V++   +K   LY L+G+T+ G    V+
Sbjct: 339 CTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 390



 Score = 35.0 bits (79), Expect(2) = 2e-19
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -3

Query: 641 DTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNTE 531
           D  S+ +L++     +  +D W+LD+  +YH+CPN +
Sbjct: 245 DEKSDAELLVAYVGCAQTSDQWILDTACTYHMCPNRD 281


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score = 86.3 bits (212), Expect(2) = 1e-18
 Identities = 43/112 (38%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           +R++F+TY+ +  G V M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL
Sbjct: 520 NRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISL 579

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 205
             LD KG+ + G  G + V  GS V++   +K   LY L+G+T+ G    V+
Sbjct: 580 CTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 631



 Score = 33.9 bits (76), Expect(2) = 1e-18
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
 Frame = -3

Query: 749 CNYCKEPGH-----WK--NDCLXXXXXXXXXXXXXXXXXXXXADTNSEEDLVLVAKEQSH 591
           C YCK  GH     WK  +                        D  S+ +L++     + 
Sbjct: 443 CKYCKRDGHDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQ 502

Query: 590 RNDVWVLDSRASYHLCPNTE 531
            +D W+L++   YH+CPN +
Sbjct: 503 TSDQWILNTACIYHMCPNRD 522


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score = 86.3 bits (212), Expect(2) = 1e-18
 Identities = 43/112 (38%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           +R++F+TY+ +  G V M D+   +V GIG+++I+  DG   TLS+V H+P + ++LISL
Sbjct: 313 NRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISL 372

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 205
             LD KG+ + G  G + V  GS V++   +K   LY L+G+T+ G    V+
Sbjct: 373 CTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVS 424



 Score = 33.9 bits (76), Expect(2) = 1e-18
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
 Frame = -3

Query: 749 CNYCKEPGH-----WK--NDCLXXXXXXXXXXXXXXXXXXXXADTNSEEDLVLVAKEQSH 591
           C YCK  GH     WK  +                        D  S+ +L++     + 
Sbjct: 236 CKYCKRDGHDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQ 295

Query: 590 RNDVWVLDSRASYHLCPNTE 531
            +D W+L++   YH+CPN +
Sbjct: 296 TSDQWILNTACIYHMCPNRD 315


>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
           Group] gi|22655747|gb|AAN04164.1| Putative
           retrotransposon protein [Oryza sativa Japonica Group]
           gi|31431214|gb|AAP53029.1| retrotransposon protein,
           putative, Ty1-copia subclass, expressed [Oryza sativa
           Japonica Group]
          Length = 1229

 Score = 88.2 bits (217), Expect(2) = 8e-18
 Identities = 46/108 (42%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNV-SMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLIS 361
           +R++FS++K +  G+V  M DN   +++GIGS++I+T DG+  TL +V H+P M +NLIS
Sbjct: 302 NRDWFSSHKSVQNGDVVRMGDNNPREIMGIGSVQIKTHDGMTRTLKDVRHIPGMARNLIS 361

Query: 360 LSLLDIKGFSFKG*CGAMYVRNGSKVILTG-LKRGTLYTLQGSTMTGT 220
           LS LD +G+ + G  G + V  GS V + G +    LY L+GST+ G+
Sbjct: 362 LSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGS 409



 Score = 29.3 bits (64), Expect(2) = 8e-18
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
 Frame = -3

Query: 749 CNYCKEPGHWKNDCLXXXXXXXXXXXXXXXXXXXXADTNSEEDLVLVAK-EQSHRNDVWV 573
           C YCK+  H+  +C                      +++S + LV  A    SH  D W+
Sbjct: 233 CKYCKKKNHFIEECWKLQNKEKRKSDGKASVVTSAENSDSADCLVFFAGCVASH--DEWI 290

Query: 572 LDSRASYHLCPNTESIS 522
           LD+   + +C N +  S
Sbjct: 291 LDTACLFLICINRDWFS 307


>emb|CAN81927.1| hypothetical protein VITISV_025281 [Vitis vinifera]
          Length = 425

 Score = 87.8 bits (216), Expect(2) = 7e-17
 Identities = 45/110 (40%), Positives = 71/110 (64%)
 Frame = -2

Query: 546 LS*HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNL 367
           +S +R +F+TY+ + GG V M +NV +KVVGI +I+I+  DG+  TL +V HVP++ K L
Sbjct: 282 MSPNRAWFNTYQPIHGGKVLMRNNVAYKVVGICTIQIKMHDGIIRTLIDVRHVPELKKIL 341

Query: 366 ISLSLLDIKGFSFKG*CGAMYVRNGSKVILTGLKRGTLYTLQGSTMTGTT 217
           ISL +LD    ++K   G + + N + V++ G +   LYT +G T+T  T
Sbjct: 342 ISLGILDSNICTYKTRGGVLRILNDALVVMRGKEINGLYTFEGGTVTSAT 391



 Score = 26.6 bits (57), Expect(2) = 7e-17
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 584 DVWVLDSRASYHLCPN 537
           D W+LD   SYH+ PN
Sbjct: 270 DEWILDLGCSYHMSPN 285


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 75.9 bits (185), Expect(2) = 1e-16
 Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
 Frame = -2

Query: 525 FSTYKQLDGGNVSMADNVVFKVVGIGSI-RIRTIDGVFCTLSEVSHVPQMTKNLISLSLL 349
           F  Y+ +DGG V M +N V  +VGI    R R +  +  +L EV H P++ +NLISL +L
Sbjct: 309 FYKYEAVDGGRVLMGNNNVCNIVGIWFCKRSRCLMELLRSLHEVRHAPRLKRNLISLGML 368

Query: 348 DIKGFSFKG*CGAMYVRNGSKVILTGLKRGTLYTLQGSTM 229
           D  G+ FK   G + VR G+++++ G+    LY LQGS++
Sbjct: 369 DSLGYFFKSRIGGLEVRKGTEIVMKGVNENGLYVLQGSSV 408



 Score = 37.7 bits (86), Expect(2) = 1e-16
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = -3

Query: 749 CNYCKEPGHWKNDCLXXXXXXXXXXXXXXXXXXXXADTNSEEDLVLVAKEQSHRNDVWVL 570
           C YC++ GH+  DC                          +   +LVA   + +   WV+
Sbjct: 236 CFYCRKEGHYIRDCFEKKKKESQEKSGDAAVASDDGSDGYQSADLLVASNSNTKGQ-WVI 294

Query: 569 DSRASYHLCP 540
           DS  S+HLCP
Sbjct: 295 DSGCSFHLCP 304


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score = 86.3 bits (212), Expect(2) = 1e-16
 Identities = 48/107 (44%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
 Frame = -2

Query: 534 REYFSTYKQLDGGNV-SMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           R +FS+YK +  G+V  M D+    +VGIGS++I+T DG+  TL  V ++P M++NLISL
Sbjct: 304 RNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISL 363

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVILTG-LKRGTLYTLQGSTMTGT 220
           S LD +G+ + G  G + V  GS V L G L    LY L+G T+TG+
Sbjct: 364 STLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTLTGS 410



 Score = 27.3 bits (59), Expect(2) = 1e-16
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = -3

Query: 749 CNYCKEPGHWKNDC--LXXXXXXXXXXXXXXXXXXXXADTNSEEDLVLVAKEQSHRNDVW 576
           C YCK   H  ++C  +                    +D +S + LV+ A   +  +D W
Sbjct: 232 CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDCLVVFAGCVAG-HDEW 290

Query: 575 VLDSRASYHLC 543
           +LDS  S+H+C
Sbjct: 291 ILDSACSFHIC 301


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score = 86.3 bits (212), Expect(2) = 1e-16
 Identities = 48/107 (44%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
 Frame = -2

Query: 534 REYFSTYKQLDGGNV-SMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           R +FS+YK +  G+V  M D+    +VGIGS++I+T DG+  TL  V ++P M++NLISL
Sbjct: 304 RNWFSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISL 363

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVILTG-LKRGTLYTLQGSTMTGT 220
           S LD +G+ + G  G + V  GS V L G L    LY L+G T+TG+
Sbjct: 364 STLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVLRGCTLTGS 410



 Score = 27.3 bits (59), Expect(2) = 1e-16
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = -3

Query: 749 CNYCKEPGHWKNDC--LXXXXXXXXXXXXXXXXXXXXADTNSEEDLVLVAKEQSHRNDVW 576
           C YCK   H  ++C  +                    +D +S + LV+ A   +  +D W
Sbjct: 232 CVYCKLKNHNIDECKKVQAKERKNKKDGKVSVASAAASDDDSGDCLVVFAGCVAG-HDEW 290

Query: 575 VLDSRASYHLC 543
           +LDS  S+H+C
Sbjct: 291 ILDSACSFHIC 301


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score = 81.3 bits (199), Expect(2) = 2e-16
 Identities = 40/112 (35%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
 Frame = -2

Query: 537 HREYFSTYKQLDGGNVSMADNVVFKVVGIGSIRIRTIDGVFCTLSEVSHVPQMTKNLISL 358
           +R++F+TY+ + GG V M D+   +V G+ +++I+  DG   TLS+V H+P + ++LISL
Sbjct: 313 NRDWFATYEAVQGGTVLMGDDTPCEVAGVETVQIKMFDGCIRTLSDVRHIPNLKRSLISL 372

Query: 357 SLLDIKGFSFKG*CGAMYVRNGSKVIL-TGLKRGTLYTLQGSTMTGTTGNVT 205
             LD K + + G  G + V  GS V++   +K   LY ++G+T+ G    V+
Sbjct: 373 CTLDRKVYKYSGGDGILKVTKGSLVVMKADIKSANLYHVRGTTILGNIAAVS 424



 Score = 31.6 bits (70), Expect(2) = 2e-16
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -3

Query: 641 DTNSEEDLVLVAKEQSHRNDVWVLDSRASYHLCPNTE 531
           D  S+ +L++     +  +D W+LD+  +YH+C N +
Sbjct: 279 DEKSDAELLVAYAGCAQTSDQWILDTACTYHMCLNRD 315