BLASTX nr result

ID: Mentha22_contig00042254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00042254
         (408 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU33807.1| hypothetical protein MIMGU_mgv1a000054mg [Mimulus...    60   2e-07
dbj|BAO49711.1| nuclear pore complex protein TPRa [Nicotiana ben...    57   3e-06

>gb|EYU33807.1| hypothetical protein MIMGU_mgv1a000054mg [Mimulus guttatus]
          Length = 2025

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = -2

Query: 392  DKLNDGADSTAETERTSILPXXXXXXXXXXXXTAVDVGSSDQGGSKPVSPLNSG-STTIN 216
            +KL +G D  AETE+ +                     +S+QGG KPVSP+N+  STTIN
Sbjct: 1924 EKLVEGVDQAAETEKAT---------------EEASTSTSEQGG-KPVSPVNNSISTTIN 1967

Query: 215  LQERARQRAHLRQAGMG 165
            LQERARQRA LRQAG G
Sbjct: 1968 LQERARQRASLRQAGRG 1984


>dbj|BAO49711.1| nuclear pore complex protein TPRa [Nicotiana benthamiana]
          Length = 2045

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
 Frame = -2

Query: 401  DSPDKLNDGADSTA-ETERT--SILPXXXXXXXXXXXXTAVDVGSSDQGGS-----KPVS 246
            +S DKLNDG D  A ET++   +++              + +VG+ D   +     K VS
Sbjct: 1927 ESSDKLNDGGDQVATETDQAVGAVVTGEKPSSSSVNSSISKEVGAGDTAAAETEEGKQVS 1986

Query: 245  PLNSGSTTINLQERARQRAHLRQAGMGVTPSP 150
            P+N  S TINL ERAR+RA LRQAGM  +  P
Sbjct: 1987 PVNRSSRTINLNERARERASLRQAGMHSSTMP 2018


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