BLASTX nr result

ID: Mentha22_contig00039949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00039949
         (625 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234362.1| GAMYB-like2 [Solanum lycopersicum] gi|121281...    64   4e-08
ref|XP_006361139.1| PREDICTED: transcription factor GAMYB-like i...    61   3e-07
ref|XP_006361138.1| PREDICTED: transcription factor GAMYB-like i...    61   3e-07
ref|XP_002298147.2| hypothetical protein POPTR_0001s23170g [Popu...    57   6e-06
ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...    56   8e-06
emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]    56   1e-05

>ref|NP_001234362.1| GAMYB-like2 [Solanum lycopersicum] gi|121281634|gb|ABM53274.1|
           GAMYB-like2 [Solanum lycopersicum]
          Length = 504

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
 Frame = +3

Query: 3   TLIQTPPTGNNLSRPLSSQNSGLLDAVLNESHIMK-----YPQINTSDFLHDSGIAVNLM 167
           TLIQ+PPT +  S  LS +NSGLLDAVL+ES  MK       Q N+ D + +S   +++ 
Sbjct: 356 TLIQSPPTEHTESCNLSPRNSGLLDAVLHESQTMKASKSILHQENSGDVVDNSCPDLHM- 414

Query: 168 DASSQLESYGEXXXXXXXXXXXXXXEGTPISGNSISEREAITGYRVREDAAIWDQTRYTT 347
              ++   +G+              E TP SG+S  E + +T    +     +D   Y  
Sbjct: 415 ---TEWGQHGDPISPLGHSAASVFSEYTPTSGSSSEEPQLVTMPACKVKQEKFDYGPYDG 471

Query: 348 SGETKNQIFSRPDFLLASDFLG 413
             +  N I  RPDFLL S+  G
Sbjct: 472 KDDASNLICPRPDFLLESNCFG 493


>ref|XP_006361139.1| PREDICTED: transcription factor GAMYB-like isoform X2 [Solanum
           tuberosum]
          Length = 494

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
 Frame = +3

Query: 3   TLIQTPPTGNNLSRPLSSQNSGLLDAVLNESHIMK-----YPQINTSDFLHDSGIAVNLM 167
           TLIQ+PPT +     LS +NSGLLDAVL+ES  M+       Q N+ D + +S   +++ 
Sbjct: 346 TLIQSPPTEHTEPCNLSPRNSGLLDAVLHESQTMRASKSILHQENSGDVVDNSCPDLHM- 404

Query: 168 DASSQLESYGEXXXXXXXXXXXXXXEGTPISGNSISEREAITGYRVREDAAIWDQTRYTT 347
              ++   +G+              E TP SG+S  E + +T    +     +D   Y  
Sbjct: 405 ---TEWGQHGDPISPLGHSAASVFSEYTPTSGSSSEEPQLVTMPACKVKQEKFDYGPYDG 461

Query: 348 SGETKNQIFSRPDFLLASDFLG 413
             +  N I  RPDFLL S+  G
Sbjct: 462 KDDASNLISPRPDFLLESNCFG 483


>ref|XP_006361138.1| PREDICTED: transcription factor GAMYB-like isoform X1 [Solanum
           tuberosum]
          Length = 504

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
 Frame = +3

Query: 3   TLIQTPPTGNNLSRPLSSQNSGLLDAVLNESHIMK-----YPQINTSDFLHDSGIAVNLM 167
           TLIQ+PPT +     LS +NSGLLDAVL+ES  M+       Q N+ D + +S   +++ 
Sbjct: 356 TLIQSPPTEHTEPCNLSPRNSGLLDAVLHESQTMRASKSILHQENSGDVVDNSCPDLHM- 414

Query: 168 DASSQLESYGEXXXXXXXXXXXXXXEGTPISGNSISEREAITGYRVREDAAIWDQTRYTT 347
              ++   +G+              E TP SG+S  E + +T    +     +D   Y  
Sbjct: 415 ---TEWGQHGDPISPLGHSAASVFSEYTPTSGSSSEEPQLVTMPACKVKQEKFDYGPYDG 471

Query: 348 SGETKNQIFSRPDFLLASDFLG 413
             +  N I  RPDFLL S+  G
Sbjct: 472 KDDASNLISPRPDFLLESNCFG 493


>ref|XP_002298147.2| hypothetical protein POPTR_0001s23170g [Populus trichocarpa]
           gi|550347964|gb|EEE82952.2| hypothetical protein
           POPTR_0001s23170g [Populus trichocarpa]
          Length = 583

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 50/146 (34%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
 Frame = +3

Query: 3   TLIQTPPTGNNLSRPLSSQNSGLLDAVLNESHIMKY----PQINTSDFLHDSGIAVN--- 161
           T IQ+PPT    S  LS ++SGLL+AVL ES  +KY    P   TSD     G  V+   
Sbjct: 389 TFIQSPPTKETKSDGLSPRSSGLLEAVLYESRTLKYSKKCPGHQTSDAFVPIGCGVHSSP 448

Query: 162 LMDASSQLESYGEXXXXXXXXXXXXXXEGTPISGNSISEREAITGYRVREDAAIWDQTRY 341
           L   +++ E + +              E TPISG+S  E+     Y V+ +  I     Y
Sbjct: 449 LNACAAEWELHADLNSPSGHSASSLFSECTPISGSSSDEQ----AYNVKPE-PIDQVLPY 503

Query: 342 TTSGETKNQI-FSRPDFLLASDFLGP 416
             + E  NQ   +RPD LL S +  P
Sbjct: 504 VEAREVLNQTDCNRPDVLLGSTWFAP 529


>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
           gi|298205121|emb|CBI40642.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
 Frame = +3

Query: 9   IQTPPTGNNLSRPLSSQNSGLLDAVLNESHIMKYPQINTSDFLHDSGIAV--NLMDA--- 173
           IQ+PP+G      LS +NSGLLDA+L+E+  +   + + SD   +S      +L D+   
Sbjct: 351 IQSPPSGTVQLECLSPRNSGLLDALLHEAKTISSGKNHLSDKSANSSTVTPGDLADSCLN 410

Query: 174 --SSQLESYGEXXXXXXXXXXXXXXEGTPI--SGNSISER---EAITGYRVREDAAIWDQ 332
              ++ E YG+              E TPI  SG+S+ E    E   G  V+ +    DQ
Sbjct: 411 MCETEWEDYGDPISPLGHSTTSIFSECTPISASGSSLDEHPPSETFPGCNVKAEPV--DQ 468

Query: 333 TRYTTSG--ETKNQI-FSRPDFLLASDFL-----GPEKDNS*NNSMLRENVDDFIMDWKH 488
             +T  G  ET  Q+ FSRPD LL S+++     GP+     N+++     DDF  ++K+
Sbjct: 469 V-WTPDGEKETSTQLDFSRPDVLLGSNWIDQSTGGPKDQAMMNDAVASLFSDDFGNNYKN 527


>emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]
          Length = 455

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
 Frame = +3

Query: 9   IQTPPTGNNLSRPLSSQNSGLLDAVLNESHIMKYPQINTSDFLHDSGIAV--NLMDA--- 173
           IQ+PP+G      LS +NSGLLDA+L+E+  +   + + SD   +S      +L D+   
Sbjct: 247 IQSPPSGTVQLECLSPRNSGLLDALLHEAKTISSGKNHLSDKSANSSTVTPGDLADSCLN 306

Query: 174 --SSQLESYGEXXXXXXXXXXXXXXEGTPI--SGNSISER---EAITGYRVREDAAIWDQ 332
              ++ E YG+              E TPI  SG+S+ E    E   G  V+ +    DQ
Sbjct: 307 MCETEWEDYGDPISPLGHSTTSIFSECTPISASGSSLDEHPPSETFPGCSVKAEPV--DQ 364

Query: 333 TRYTTSG--ETKNQI-FSRPDFLLASDFL-----GPEKDNS*NNSMLRENVDDFIMDWKH 488
             +T  G  ET  Q+ FSRPD LL S+++     GP+     N+++     DDF  ++K+
Sbjct: 365 V-WTPDGEKETSTQLDFSRPDVLLGSNWIDQSTGGPKDQAMMNDAVASLFSDDFGNNYKN 423


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