BLASTX nr result

ID: Mentha22_contig00039925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00039925
         (932 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago ...   119   1e-48
ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago trunc...   117   5e-24
ref|XP_002518611.1| conserved hypothetical protein [Ricinus comm...    55   2e-14
emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera]    73   1e-10
ref|XP_002523276.1| conserved hypothetical protein [Ricinus comm...    63   2e-07

>ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago truncatula]
           gi|355477332|gb|AES58535.1| hypothetical protein
           MTR_1g005250 [Medicago truncatula]
          Length = 197

 Score =  119 bits (297), Expect(2) = 1e-48
 Identities = 56/67 (83%), Positives = 57/67 (85%)
 Frame = +3

Query: 528 YDHLGLRCHDIVLWKRAGCLEARPGFFGVVGEGLTFLTHIQSYRHGPTDLFSIRASSSAT 707
           YDHLGLRCHD    +  G LE RPGFFGVVGEGLTFLTHI SYRHGPTDLFSI ASSSAT
Sbjct: 101 YDHLGLRCHDYFSMEAGGLLEVRPGFFGVVGEGLTFLTHIHSYRHGPTDLFSIGASSSAT 160

Query: 708 RFYLTKP 728
           RFYLTKP
Sbjct: 161 RFYLTKP 167



 Score =  102 bits (253), Expect(2) = 1e-48
 Identities = 57/86 (66%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = +1

Query: 277 GSLISTPPVLVRSGPWSSVSGLPADKISEIDQPAGLVWLFFSIE-KESAVCASHLLIGSA 453
           GSLISTPPVL+RSGPWSSVSGLPADKISEIDQPAGLVWLF SIE KESAVC         
Sbjct: 37  GSLISTPPVLIRSGPWSSVSGLPADKISEIDQPAGLVWLFLSIEKKESAVC--------- 87

Query: 454 GRHGIFVQI**IKAGRTCDGSQGFNM 531
                        AGRTCDGS   N+
Sbjct: 88  -------------AGRTCDGSPRSNI 100


>ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago truncatula]
           gi|355522519|gb|AET02973.1| NADH dehydrogenase subunit F
           [Medicago truncatula]
          Length = 187

 Score =  117 bits (294), Expect = 5e-24
 Identities = 58/63 (92%), Positives = 60/63 (95%), Gaps = 1/63 (1%)
 Frame = +1

Query: 277 GSLISTPPVLVRSGPWSSVSGLPADKISEIDQPAGLVWLFFSIE-KESAVCASHLLIGSA 453
           GSLISTPPVL+RSGPWSSVSG PADKISEIDQPAGLVWLF SIE KESAVCASHLL+GSA
Sbjct: 19  GSLISTPPVLIRSGPWSSVSGFPADKISEIDQPAGLVWLFLSIEKKESAVCASHLLLGSA 78

Query: 454 GRH 462
           GRH
Sbjct: 79  GRH 81


>ref|XP_002518611.1| conserved hypothetical protein [Ricinus communis]
           gi|223542210|gb|EEF43753.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 60

 Score = 55.1 bits (131), Expect(2) = 2e-14
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +3

Query: 642 HIQSYRHGPTDLFSIRASSSATRFYLTKP 728
           HIQSYRH PTDLFSI ASSS T+FYLTKP
Sbjct: 2   HIQSYRHSPTDLFSIGASSSTTQFYLTKP 30



 Score = 51.2 bits (121), Expect(2) = 2e-14
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +2

Query: 731 APPRREFALPNSLFDNKAESPYRTLISFE 817
           A PRREFALPNSLFDNKAE+P +T ISFE
Sbjct: 32  AHPRREFALPNSLFDNKAETPDQTFISFE 60


>emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera]
          Length = 124

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 45/88 (51%), Positives = 47/88 (53%)
 Frame = +1

Query: 121 MAFSEPLVAYVVVGIPTCSSLPPYLRIQRWPLDVVVTA*AWLILSEKKVGFWGSLISTPP 300
           +AFS+PLVAYVVVGIPT                                        TPP
Sbjct: 21  LAFSQPLVAYVVVGIPT----------------------------------------TPP 40

Query: 301 VLVRSGPWSSVSGLPADKISEIDQPAGL 384
           VLVRSG WSSVSGLPADKISEIDQPAGL
Sbjct: 41  VLVRSGLWSSVSGLPADKISEIDQPAGL 68


>ref|XP_002523276.1| conserved hypothetical protein [Ricinus communis]
           gi|223537489|gb|EEF39115.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 136

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 39/88 (44%), Positives = 42/88 (47%)
 Frame = -1

Query: 413 SFSIEKNSQTNPAGWSISEILSAGKPETDDHGPDLTSTGGVLINEPQKPTFFSDKINQA* 234
           SF  E+NSQT P  WSIS+ILS GK ETD+ GPDLTST GV                   
Sbjct: 84  SFEAERNSQTKPVVWSISKILSIGKLETDNQGPDLTSTRGV------------------- 124

Query: 233 AVTTTSKGHLWILK*GGKEEHVGMPTTT 150
                            KEEHVGMPT T
Sbjct: 125 ----------------HKEEHVGMPTPT 136


Top