BLASTX nr result
ID: Mentha22_contig00034249
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00034249
(336 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 122 5e-26
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 119 3e-25
emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. olei... 114 1e-23
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 114 1e-23
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 113 3e-23
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 112 7e-23
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 110 3e-22
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 108 6e-22
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 108 8e-22
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 107 1e-21
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 107 1e-21
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 107 2e-21
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 107 2e-21
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 106 3e-21
emb|CAA73803.1| reverse transcriptase [Allium cepa] 106 4e-21
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 106 4e-21
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 106 4e-21
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 105 5e-21
ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256... 105 7e-21
ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [S... 105 9e-21
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 122 bits (306), Expect = 5e-26
Identities = 57/109 (52%), Positives = 80/109 (73%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
V +FRPIAC +V+YKII+KILTSRM L ++S QSAF+KGR I DN L+ EL+++Y
Sbjct: 194 VKNFRPIACCSVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSY 253
Query: 147 ERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
RK GI+ RCMVKIDL+KAY+ + W F++ ++ L F F+ W++ C+
Sbjct: 254 SRK-GISPRCMVKIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCL 301
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 119 bits (299), Expect = 3e-25
Identities = 56/109 (51%), Positives = 77/109 (70%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
V +FRPIAC V+YKII+K+LT+RM + ++++ AQS FI GR+I DN LA ELIR Y
Sbjct: 511 VKEFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGY 570
Query: 147 ERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
RK ++ RC++K+D+RKAYD + W FL +LY F F+ WI+ CV
Sbjct: 571 TRKH-MSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECV 618
>emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. oleifera]
Length = 137
Score = 114 bits (286), Expect = 1e-23
Identities = 51/108 (47%), Positives = 75/108 (69%)
Frame = -1
Query: 324 SDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTYE 145
+DFRPI+C N+VYK+I+KI+ +R+ P L+ +SP Q+AF+KGR++ +N LA ELIR Y
Sbjct: 1 NDFRPISCCNIVYKVISKIIANRLKPILRDCVSPNQAAFLKGRSLGENVLLASELIRDY- 59
Query: 144 RKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
KS M+K+D+RKA+D + WDF+ +L F P F+ WI C+
Sbjct: 60 NKSSCLRSSMLKVDIRKAFDTVCWDFVIKILRAQGFPPLFVSWIQECI 107
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 114 bits (285), Expect = 1e-23
Identities = 50/107 (46%), Positives = 75/107 (70%)
Frame = -1
Query: 321 DFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTYER 142
D+RPI+C NV+YK+I+KI+ +R+ L + I+ QSAF+K R +++N LA EL++ Y
Sbjct: 175 DYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDY-H 233
Query: 141 KSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
K I+ARC +KID+ KA+D + W FL + L +NF P FI+WI C+
Sbjct: 234 KDSISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCI 280
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 113 bits (282), Expect = 3e-23
Identities = 49/109 (44%), Positives = 77/109 (70%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
+ D+RPI+C NV+YK+I+KI+ +R+ L I+ QSAF+K R +++N LA EL++ Y
Sbjct: 941 MKDYRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIENLLLATELVKDY 1000
Query: 147 ERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
K I+ RC +KID+ KA+D + W FL++VL L+F P F++W++ CV
Sbjct: 1001 -HKDTISGRCAIKIDISKAFDSVQWSFLKNVLSALDFPPEFVHWVMLCV 1048
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 112 bits (279), Expect = 7e-23
Identities = 50/109 (45%), Positives = 77/109 (70%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
+ D+RPI+C NV+YK+I+KI+ +R+ L + I+ QSAFIK R +++N LA EL++ Y
Sbjct: 44 IKDYRPISCCNVLYKVISKIIANRLKRVLPQFIAGNQSAFIKDRLLIENLLLATELVKDY 103
Query: 147 ERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
K ++ RC +KID+ KA+D + W FLR+VL L+F F++WI+ CV
Sbjct: 104 -HKDSVSERCAIKIDISKAFDSVQWSFLRNVLLTLDFPQEFVHWIMLCV 151
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 110 bits (274), Expect = 3e-22
Identities = 52/107 (48%), Positives = 73/107 (68%)
Frame = -1
Query: 321 DFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTYER 142
D+RPIAC + +YKII+KILT R+ + +++ AQ+ FI R+I DN LA ELIR Y R
Sbjct: 516 DYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNR 575
Query: 141 KSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
+ ++ RC++K+D+RKAYD + W FL +L L F FI WI+ CV
Sbjct: 576 RH-VSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACV 621
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 108 bits (271), Expect = 6e-22
Identities = 44/109 (40%), Positives = 80/109 (73%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
+S +RP++C NV+YKII+KI+ +R+ L K I+ Q+AF+K R +++N LA EL++ Y
Sbjct: 53 ISHYRPLSCCNVIYKIISKIIANRLKMVLPKFIAGNQTAFVKDRLLIENLLLATELVKDY 112
Query: 147 ERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
++S +++RC +KID+ KA++ + W F+R++L ++F F++WI+ C+
Sbjct: 113 HKES-VSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCI 160
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 108 bits (270), Expect = 8e-22
Identities = 53/109 (48%), Positives = 72/109 (66%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
+SDFRPI+C N VYK+I+K+LT R+ FL IS +QSAF+ GR ++N LA EL+ Y
Sbjct: 417 MSDFRPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGY 476
Query: 147 ERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
+K+ I M+K+DLRKA+D + WDF+ L LN F WIL C+
Sbjct: 477 NKKN-IAPSSMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECL 524
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 107 bits (268), Expect = 1e-21
Identities = 50/109 (45%), Positives = 73/109 (66%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
+ D+RPI+C NV+YK+I+KIL +R+ L I QSAF+K R +M+N LA EL++ Y
Sbjct: 823 MKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDY 882
Query: 147 ERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
++S +T RC +KID+ KA+D + W FL + L LNF F +WI C+
Sbjct: 883 HKES-VTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCI 930
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 107 bits (268), Expect = 1e-21
Identities = 48/109 (44%), Positives = 75/109 (68%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
+ D+RPI+C NV+YK+I+KI+ +R+ L K I QSAF+K R +++N LA E+++ Y
Sbjct: 414 MKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDY 473
Query: 147 ERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
K +++RC +KID+ KA+D + W FL +VL +NF P F +WI C+
Sbjct: 474 -HKDSVSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCI 521
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 107 bits (266), Expect = 2e-21
Identities = 50/109 (45%), Positives = 73/109 (66%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
+ D+RPI+C NV+YK I+K+L +R+ L + I+P QSAFI R +M+N LA EL++ Y
Sbjct: 792 MKDYRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDY 851
Query: 147 ERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
K G++ RC +KIDL KA+D + W FL + L L+ FI+WI C+
Sbjct: 852 -HKDGLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCI 899
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 107 bits (266), Expect = 2e-21
Identities = 49/110 (44%), Positives = 77/110 (70%)
Frame = -1
Query: 330 GVSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRT 151
G+ D+RPI+C NV+YKI++K++ +R+ L I+P QSAFIK R +M+N LA EL++
Sbjct: 672 GMKDYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKD 731
Query: 150 YERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
Y ++S I++R +KID+ KA+D + W FL +VL ++ FI+WI C+
Sbjct: 732 YHKES-ISSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCI 780
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 106 bits (265), Expect = 3e-21
Identities = 51/109 (46%), Positives = 72/109 (66%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
+ D+RPI+C NV+YK I+KIL +R+ L K I QSAF+K R +++N LA EL++ Y
Sbjct: 247 IKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDY 306
Query: 147 ERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
K I+ RC +KID+ KA+D + W FL VL +NF FI+WI C+
Sbjct: 307 -HKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCM 354
>emb|CAA73803.1| reverse transcriptase [Allium cepa]
Length = 137
Score = 106 bits (264), Expect = 4e-21
Identities = 49/106 (46%), Positives = 73/106 (68%)
Frame = -1
Query: 318 FRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTYERK 139
FRPI+C N +YK I+K+L SR+ L L+SP Q+A++ GRNI+D+ L+ ELI+ Y+RK
Sbjct: 3 FRPISCCNTIYKCISKVLASRLKHVLPTLVSPNQAAYLSGRNILDHVLLSHELIKGYKRK 62
Query: 138 SGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
S T R M+K+D+ KA+D + W+ + +L +NF P I WI C+
Sbjct: 63 SA-TPRAMLKLDIMKAFDTLQWNSIVRILGYMNFPPHIIAWIYECI 107
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 106 bits (264), Expect = 4e-21
Identities = 49/109 (44%), Positives = 74/109 (67%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
++DFRPI+C N +YK+I K+LTSR+ L ++ISP+QSAF+ GR + +N LA E++ Y
Sbjct: 521 MTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGY 580
Query: 147 ERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
K+ I++R M+K+DLRKA+D + WDF+ L F+ WI C+
Sbjct: 581 NTKN-ISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCI 628
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 106 bits (264), Expect = 4e-21
Identities = 49/109 (44%), Positives = 74/109 (67%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
++DFRPI+C N +YK+I K+LTSR+ L ++ISP+QSAF+ GR + +N LA E++ Y
Sbjct: 521 MTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGY 580
Query: 147 ERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
K+ I++R M+K+DLRKA+D + WDF+ L F+ WI C+
Sbjct: 581 NTKN-ISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCI 628
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 105 bits (263), Expect = 5e-21
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 2/111 (1%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
VSD+RPIA NV YKI+ KILT R+ P+L +LIS QSAF+ GR I DN + E++ +
Sbjct: 442 VSDYRPIALCNVQYKIVAKILTRRLQPWLSELISLHQSAFVPGRAIADNVLITHEILH-F 500
Query: 147 ERKSGITARC--MVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
R SG C +K D+ KAYD I W+FL++VL L FH +I W++ CV
Sbjct: 501 LRVSGAKKYCSMAIKTDMSKAYDRIKWNFLQEVLMRLGFHDKWIRWVMQCV 551
>ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum
lycopersicum]
Length = 421
Score = 105 bits (262), Expect = 7e-21
Identities = 49/109 (44%), Positives = 71/109 (65%)
Frame = -1
Query: 327 VSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRTY 148
V ++R I C V+YKII+K++T+RM + +I +Q FI GR I +N LA EL+ +Y
Sbjct: 179 VKEYRTITCCTVLYKIISKVITNRMHDVIHNVICDSQVGFILGRKISENILLAHELVNSY 238
Query: 147 ERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
RK+ I+ R M+KIDL+K YD + W FL+ V+ GL F F W++ CV
Sbjct: 239 TRKN-ISPRSMLKIDLQKVYDSVEWPFLKQVMVGLGFPDMFTQWVMHCV 286
>ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [Sorghum bicolor]
gi|241943773|gb|EES16918.1| hypothetical protein
SORBIDRAFT_08g007680 [Sorghum bicolor]
Length = 649
Score = 105 bits (261), Expect = 9e-21
Identities = 46/110 (41%), Positives = 72/110 (65%)
Frame = -1
Query: 330 GVSDFRPIACTNVVYKIITKILTSRMSPFLQKLISPAQSAFIKGRNIMDNFYLAQELIRT 151
G+++FRPI+ NV+YKI +K+L R+ FL ++IS QSAF+ GR I DN ++ E I
Sbjct: 61 GMTEFRPISLCNVLYKICSKVLALRLREFLDEIISEEQSAFVPGRLITDNVLISYECIHY 120
Query: 150 YERKSGITARCMVKIDLRKAYDCISWDFLRDVLYGLNFHPCFIYWILTCV 1
+R+ G C +K+D+ KAYD + W++L+ ++ L FH F+ I+ CV
Sbjct: 121 LKRRKGKNGACAIKLDMAKAYDPVEWEYLQGIMLKLGFHEAFVRMIMKCV 170