BLASTX nr result
ID: Mentha22_contig00033964
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00033964
(560 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise... 261 7e-68
gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus... 237 2e-60
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 185 6e-45
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub... 184 1e-44
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 169 3e-40
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub... 167 2e-39
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 166 5e-39
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 165 6e-39
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin... 164 1e-38
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub... 155 5e-36
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su... 148 8e-34
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su... 143 3e-32
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su... 143 3e-32
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su... 143 3e-32
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su... 143 3e-32
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun... 143 3e-32
ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata] gi... 141 1e-31
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 141 1e-31
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 135 5e-30
ref|XP_006300646.1| hypothetical protein CARUB_v10019657mg [Caps... 135 5e-30
>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
Length = 1380
Score = 261 bits (668), Expect = 7e-68
Identities = 133/186 (71%), Positives = 159/186 (85%)
Frame = -3
Query: 558 AEVGETSVSKCSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTLE 379
AEV E +V++ LASDYWD++PKDS Q+ S +P+N+RVL P+QVY ILKDVCPKTLE
Sbjct: 121 AEVQEMAVNQHHCIGLASDYWDIIPKDSPQDQSDIPSNRRVLYPSQVYSILKDVCPKTLE 180
Query: 378 ASFKRKNSIFLNSLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELSARVLERY 199
A KRKNSIFLNSLLVTPNSHRVREFG ITVD TT++YRKL DFRGS NEL+ARVLERY
Sbjct: 181 ALLKRKNSIFLNSLLVTPNSHRVREFGGHITVDGTTRLYRKLTDFRGSANELNARVLERY 240
Query: 198 KLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPGVKV 19
KI SEK++ ++K+YEKQS+NDSASS+SGL+NIK+L+L KRTD++FRMVVVGDP +KV
Sbjct: 241 ---KICSEKVSAIEKIYEKQSSNDSASSSSGLRNIKELILAKRTDNAFRMVVVGDPRLKV 297
Query: 18 HEIGLP 1
EIGLP
Sbjct: 298 DEIGLP 303
>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus guttatus]
Length = 1379
Score = 237 bits (604), Expect = 2e-60
Identities = 124/186 (66%), Positives = 141/186 (75%)
Frame = -3
Query: 558 AEVGETSVSKCSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTLE 379
AEV E V+KCS G LA DYWDV+PKDSA E++ LP N+RVLLPAQVY+ILKDVCP TL+
Sbjct: 156 AEVKEILVNKCSSGNLAYDYWDVIPKDSAVEHAVLPPNRRVLLPAQVYNILKDVCPTTLQ 215
Query: 378 ASFKRKNSIFLNSLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELSARVLERY 199
KRKNSIFLNSLLVTPNSHRVREFGQRIT+DE T+MYRKL+DFRGSPNEL+AR
Sbjct: 216 GLLKRKNSIFLNSLLVTPNSHRVREFGQRITIDELTRMYRKLVDFRGSPNELTAR----- 270
Query: 198 KLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPGVKV 19
S NDSASS+S LKNIK+L+L KRTD+ FRMVVVGDP ++V
Sbjct: 271 --------------------SLNDSASSSSALKNIKELVLAKRTDNCFRMVVVGDPRIRV 310
Query: 18 HEIGLP 1
EIGLP
Sbjct: 311 DEIGLP 316
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 185 bits (470), Expect = 6e-45
Identities = 104/190 (54%), Positives = 132/190 (69%), Gaps = 4/190 (2%)
Frame = -3
Query: 558 AEVGETSVSKCSD--GV-LASDYWDVLPKDSAQENSSLPAN-KRVLLPAQVYDILKDVCP 391
AEV E + K GV LASDYWD +P D+ QE S +N KRVL AQVY ILKD+ P
Sbjct: 148 AEVNENLLKKVQQTTGVSLASDYWDFIPYDAQQEASVNSSNYKRVLSHAQVYSILKDIDP 207
Query: 390 KTLEASFKRKNSIFLNSLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELSARV 211
LE KRKNSIFL S L+TPNSHRV EFGQ + DE+ ++YRKLIDFRG+ N+LS V
Sbjct: 208 GFLEGLLKRKNSIFLKSCLLTPNSHRVTEFGQHMIFDESNRLYRKLIDFRGTANDLSMCV 267
Query: 210 LERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDP 31
L+R K+SKIR+ ++ ND + A+GLK +K+L+L KRT+H+FRMVVVGDP
Sbjct: 268 LDRIKVSKIRA----------DRSVINDPNAPATGLKYVKELVLAKRTNHAFRMVVVGDP 317
Query: 30 GVKVHEIGLP 1
+++ EIG+P
Sbjct: 318 NIELGEIGIP 327
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
lycopersicum]
Length = 1446
Score = 184 bits (468), Expect = 1e-44
Identities = 102/190 (53%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Frame = -3
Query: 558 AEVGET---SVSKCSDGVLASDYWDVLPKDSAQENSSLPAN-KRVLLPAQVYDILKDVCP 391
AEV E V K + LASDYWD +P D+ QE S +N KRVL AQVY ILKD+ P
Sbjct: 148 AEVNENLLKKVQKTTGVSLASDYWDFIPYDAQQEASVNSSNYKRVLSHAQVYSILKDIDP 207
Query: 390 KTLEASFKRKNSIFLNSLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELSARV 211
LE +RKNSIFL S L+TPNSHRV EFGQ + DE+ ++YRKLIDFRG+ N+LS V
Sbjct: 208 GFLEGLLRRKNSIFLKSCLLTPNSHRVTEFGQHMIFDESNRLYRKLIDFRGTANDLSMCV 267
Query: 210 LERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDP 31
L+R K+SKIR+ ++ ND + A+GLK +K+L+L KRT+H+FRMVVVGDP
Sbjct: 268 LDRIKVSKIRA----------DRSVINDPNAPATGLKYVKELVLAKRTNHAFRMVVVGDP 317
Query: 30 GVKVHEIGLP 1
+++ EIG+P
Sbjct: 318 NIELGEIGIP 327
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
subunit 1-like [Vitis vinifera]
Length = 1560
Score = 169 bits (429), Expect = 3e-40
Identities = 92/178 (51%), Positives = 120/178 (67%), Gaps = 6/178 (3%)
Frame = -3
Query: 516 VLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTLEASFKRKNSIFLNSL 337
VL DYWD +PKD QE + L N+RVL AQV+ +LKD+ P ++ R +S FLN L
Sbjct: 207 VLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFFLNCL 266
Query: 336 LVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSE 175
VTPN+HRV E GQ + D+ ++ Y+KL+DFRG+ NELS RVL+ K SK+RSE
Sbjct: 267 PVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKLRSE 326
Query: 174 KLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPGVKVHEIGLP 1
K T + DSAS SGLK IK++LLGKRT+HSFRM+VVGDP +++ EIG+P
Sbjct: 327 KST----------SKDSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIP 374
>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Cucumis sativus]
Length = 1469
Score = 167 bits (423), Expect = 2e-39
Identities = 91/185 (49%), Positives = 127/185 (68%), Gaps = 8/185 (4%)
Frame = -3
Query: 531 KCSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTLEASFKRKNSI 352
+ + G L SDYWD +PKD QE S N+++L AQV+ +LKD+ PK L+ +S+
Sbjct: 169 RVAKGGLPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDSL 228
Query: 351 FLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLS 190
FLNS VTPNSHRV E GQR+ DE T+ Y+K++DFRG+ NEL +RVL+ K+S
Sbjct: 229 FLNSFPVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKIS 288
Query: 189 K-IRSEKLTNLQKV-YEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPGVKVH 16
K I + + L V Y ++ D+A+S+SGL+ IKD++LGKR+DH FRMVVVGDP +++
Sbjct: 289 KAIYNIFVFCLNHVNYYQKKIKDTATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELS 348
Query: 15 EIGLP 1
EIG+P
Sbjct: 349 EIGIP 353
>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 166 bits (419), Expect = 5e-39
Identities = 91/178 (51%), Positives = 121/178 (67%), Gaps = 6/178 (3%)
Frame = -3
Query: 516 VLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTLEASFKRKNSIFLNSL 337
VL DYWD +PKD QE + L N+RVL AQV+ +LKD+ P ++ R +S FLN L
Sbjct: 174 VLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFFLNCL 233
Query: 336 LVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSE 175
VTPN+HRV E GQ + D+ ++ Y+KL+DFRG+ NELS RVL+ K S
Sbjct: 234 PVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTS----- 288
Query: 174 KLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPGVKVHEIGLP 1
K +NL+ EK ++ DSAS SGLK IK++LLGKRT+HSFRM+VVGDP +++ EIG+P
Sbjct: 289 KASNLRS--EKSTSKDSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIP 344
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 165 bits (418), Expect = 6e-39
Identities = 94/196 (47%), Positives = 125/196 (63%), Gaps = 11/196 (5%)
Frame = -3
Query: 555 EVGETS---VSKCSDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKT 385
EV E S V K L SDYWD +PKD QE S + N+RVL +QV +LKDV P+
Sbjct: 160 EVSEKSSMKVRKRGKQALPSDYWDFIPKDEQQEESLIRPNRRVLSHSQVRYLLKDVDPEF 219
Query: 384 LEASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNEL 223
++ +SIFLN VTPNSHRV E GQR+ D+ T++Y+KL DFRG NEL
Sbjct: 220 IKKFVLSMDSIFLNCFPVTPNSHRVTEIMHASSNGQRLIFDQRTRVYKKLADFRGIANEL 279
Query: 222 SARVLERYKLSKIRSEKLTNLQK--VYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRM 49
S+ VLE K+SK+ EK +N + V ++ DSAS+ SGL+ +KD++LGKR DH FRM
Sbjct: 280 SSHVLECLKISKLHLEKPSNEESALVLAQKRNKDSASNMSGLRYMKDVILGKRNDHCFRM 339
Query: 48 VVVGDPGVKVHEIGLP 1
V+ G+P +K+ EI +P
Sbjct: 340 VLTGNPNLKLSEISIP 355
>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 1475
Score = 164 bits (416), Expect = 1e-38
Identities = 88/178 (49%), Positives = 117/178 (65%), Gaps = 7/178 (3%)
Frame = -3
Query: 513 LASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTLEASFKRKNSIFLNSLL 334
LA+DYWD++PKD QE + N+RVL AQV +L+++ P + +++SIFLN
Sbjct: 170 LAADYWDIIPKDEQQEENITRPNQRVLSHAQVIHLLENIDPNFIRKFVLKRDSIFLNCFS 229
Query: 333 VTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSEK 172
VTPN HRV E GQR+ D+ T+ Y+K++DFRG ELS RVL+ K SKI +K
Sbjct: 230 VTPNCHRVTEVTHAFSNGQRLVFDDRTRAYKKMVDFRGIAKELSFRVLDCLKTSKINPDK 289
Query: 171 LTNLQKVYEKQ-STNDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPGVKVHEIGLP 1
N Q NDS+SS+SGL+ IKD++LGKR D+SFRMVVVGDP +K EIG+P
Sbjct: 290 SVNNDDYMALQRKMNDSSSSSSGLRWIKDVVLGKRNDNSFRMVVVGDPNIKFSEIGIP 347
>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1438
Score = 155 bits (393), Expect = 5e-36
Identities = 83/179 (46%), Positives = 112/179 (62%), Gaps = 6/179 (3%)
Frame = -3
Query: 519 GVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTLEASFKRKNSIFLNS 340
G L DYWD +PKD + ++ +++VL AQV+ +L DV + +S+ L+
Sbjct: 152 GELPPDYWDFIPKDPQHDETNTNPHRKVLSHAQVHFLLSDVDSNFITKFVPTTSSLSLDC 211
Query: 339 LLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRS 178
LVTPN HRV E GQ + D+ T+ YRKL+DFRG+ NEL +RVL+ K+SKI
Sbjct: 212 FLVTPNCHRVTEVMYSFNNGQSLMFDDRTRAYRKLVDFRGTANELGSRVLDCLKISKINK 271
Query: 177 EKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPGVKVHEIGLP 1
EK E+Q DS S SGL+ IKD++LGKR+DH FRMVVVGDP +K+ EIG+P
Sbjct: 272 EKTGRDSISVEQQKIKDSPSRTSGLRWIKDVVLGKRSDHCFRMVVVGDPNIKLSEIGIP 330
>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
max]
Length = 1369
Score = 148 bits (374), Expect = 8e-34
Identities = 82/194 (42%), Positives = 126/194 (64%), Gaps = 8/194 (4%)
Frame = -3
Query: 558 AEVGETSVSKCSDGV-LASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTL 382
A + E SK + G + +DYW+ +P D+ QE + + N+RVL PAQV ++L V P +
Sbjct: 60 AIIVEVKASKKTLGTEIPADYWNFIPCDAQQEENYV--NRRVLSPAQVLNLLNGVDPDFI 117
Query: 381 EASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELS 220
E RKN ++LN VTPN HRV E G R++ D+ T+ +KL+DFRG+PNELS
Sbjct: 118 EKYIPRKNLLYLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTPNELS 177
Query: 219 ARVLERYKLSKIRSEKLTN-LQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVV 43
+RVL+ ++SK+ +K N + +++ ++A ++SGL+ IKD++LGKR D S R VV
Sbjct: 178 SRVLDCLRISKLNPDKTPNSIFADIQQRKIGENACNSSGLRWIKDVVLGKRNDSSLRTVV 237
Query: 42 VGDPGVKVHEIGLP 1
VGDP +++ E+G+P
Sbjct: 238 VGDPDLELSEVGIP 251
>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
[Glycine max]
Length = 1381
Score = 143 bits (361), Expect = 3e-32
Identities = 82/194 (42%), Positives = 124/194 (63%), Gaps = 8/194 (4%)
Frame = -3
Query: 558 AEVGETSVSKCSDGV-LASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTL 382
A + E SK + G + +D+W+ +P D+ QE + + N+RVL P QV +L DV P +
Sbjct: 69 AIIVEVKASKKTLGTEIPADFWNFIPCDAQQEENYV--NRRVLSPVQVNYLLNDVDPDFI 126
Query: 381 EASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELS 220
E RKN + LN VTPN HRV E G R++ D+ T+ +KL+DFRG+ NELS
Sbjct: 127 EKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELS 186
Query: 219 ARVLERYKLSKIRSEKLTN-LQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVV 43
+RVL+ ++SK+ +K N + +++ ++A ++SGL+ IKD++LGKR D SFR VV
Sbjct: 187 SRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVV 246
Query: 42 VGDPGVKVHEIGLP 1
VGDP +++ EIG+P
Sbjct: 247 VGDPDLELSEIGIP 260
>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
[Glycine max]
Length = 1455
Score = 143 bits (361), Expect = 3e-32
Identities = 82/194 (42%), Positives = 124/194 (63%), Gaps = 8/194 (4%)
Frame = -3
Query: 558 AEVGETSVSKCSDGV-LASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTL 382
A + E SK + G + +D+W+ +P D+ QE + + N+RVL P QV +L DV P +
Sbjct: 146 AIIVEVKASKKTLGTEIPADFWNFIPCDAQQEENYV--NRRVLSPVQVNYLLNDVDPDFI 203
Query: 381 EASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELS 220
E RKN + LN VTPN HRV E G R++ D+ T+ +KL+DFRG+ NELS
Sbjct: 204 EKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELS 263
Query: 219 ARVLERYKLSKIRSEKLTN-LQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVV 43
+RVL+ ++SK+ +K N + +++ ++A ++SGL+ IKD++LGKR D SFR VV
Sbjct: 264 SRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVV 323
Query: 42 VGDPGVKVHEIGLP 1
VGDP +++ EIG+P
Sbjct: 324 VGDPDLELSEIGIP 337
>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Glycine max]
Length = 1457
Score = 143 bits (361), Expect = 3e-32
Identities = 82/194 (42%), Positives = 124/194 (63%), Gaps = 8/194 (4%)
Frame = -3
Query: 558 AEVGETSVSKCSDGV-LASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTL 382
A + E SK + G + +D+W+ +P D+ QE + + N+RVL P QV +L DV P +
Sbjct: 146 AIIVEVKASKKTLGTEIPADFWNFIPCDAQQEENYV--NRRVLSPVQVNYLLNDVDPDFI 203
Query: 381 EASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELS 220
E RKN + LN VTPN HRV E G R++ D+ T+ +KL+DFRG+ NELS
Sbjct: 204 EKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELS 263
Query: 219 ARVLERYKLSKIRSEKLTN-LQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVV 43
+RVL+ ++SK+ +K N + +++ ++A ++SGL+ IKD++LGKR D SFR VV
Sbjct: 264 SRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVV 323
Query: 42 VGDPGVKVHEIGLP 1
VGDP +++ EIG+P
Sbjct: 324 VGDPDLELSEIGIP 337
>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Glycine max]
Length = 1458
Score = 143 bits (361), Expect = 3e-32
Identities = 82/194 (42%), Positives = 124/194 (63%), Gaps = 8/194 (4%)
Frame = -3
Query: 558 AEVGETSVSKCSDGV-LASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTL 382
A + E SK + G + +D+W+ +P D+ QE + + N+RVL P QV +L DV P +
Sbjct: 146 AIIVEVKASKKTLGTEIPADFWNFIPCDAQQEENYV--NRRVLSPVQVNYLLNDVDPDFI 203
Query: 381 EASFKRKNSIFLNSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELS 220
E RKN + LN VTPN HRV E G R++ D+ T+ +KL+DFRG+ NELS
Sbjct: 204 EKYIPRKNLLCLNCFPVTPNCHRVTEVPYAISSGSRLSFDDRTRSCKKLVDFRGTANELS 263
Query: 219 ARVLERYKLSKIRSEKLTN-LQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVV 43
+RVL+ ++SK+ +K N + +++ ++A ++SGL+ IKD++LGKR D SFR VV
Sbjct: 264 SRVLDCLRISKLNPDKTPNSIFADIQQRKIGENAFNSSGLRWIKDVVLGKRNDSSFRTVV 323
Query: 42 VGDPGVKVHEIGLP 1
VGDP +++ EIG+P
Sbjct: 324 VGDPDLELSEIGIP 337
>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
gi|462406650|gb|EMJ12114.1| hypothetical protein
PRUPE_ppa000278mg [Prunus persica]
Length = 1356
Score = 143 bits (361), Expect = 3e-32
Identities = 79/181 (43%), Positives = 105/181 (58%), Gaps = 6/181 (3%)
Frame = -3
Query: 525 SDGVLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTLEASFKRKNSIFL 346
++G+L +DYWD +PKD+ Q+ S + NKRVL AQV+ +LKDV K +E + NS+ +
Sbjct: 164 ANGILPADYWDFIPKDAQQDESCMKPNKRVLSHAQVHYLLKDVDTKFIEKIVPKTNSLSM 223
Query: 345 NSLLVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKI 184
S LVTPN HRV E GQR+ DE T+ YRKL+DF+G NEL +
Sbjct: 224 GSFLVTPNCHRVTEVMHSFSNGQRLMFDERTRAYRKLVDFKGVANELGSH---------- 273
Query: 183 RSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPGVKVHEIGL 4
S SGL+ IKD++LGKR+DH FR VVVGDP +K+ EIG+
Sbjct: 274 -------------------DPSKTSGLRWIKDVVLGKRSDHCFRTVVVGDPNIKLSEIGI 314
Query: 3 P 1
P
Sbjct: 315 P 315
>ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata]
gi|297332282|gb|EFH62700.1| NRPD1a [Arabidopsis lyrata
subsp. lyrata]
Length = 1456
Score = 141 bits (356), Expect = 1e-31
Identities = 80/193 (41%), Positives = 115/193 (59%), Gaps = 8/193 (4%)
Frame = -3
Query: 555 EVGETSVSKCSD-GVLA--SDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKT 385
EV E S+ K GVLA DYW +P+DS + S L +R+L AQVY +L + +
Sbjct: 148 EVNEESLMKLKKRGVLALPPDYWSFVPQDSNIDESCLKPTRRILTHAQVYALLSGIDQRL 207
Query: 384 LEASFKRKNSIFLNSLLVTPNSHRVREF-----GQRITVDETTKMYRKLIDFRGSPNELS 220
++ +S+ L S VTPN +RV E G R+ DE T++YRKL+ F G+ ELS
Sbjct: 208 IKKDIPMFDSLALTSFPVTPNGYRVTEIVHQFNGARLVFDERTRIYRKLVGFEGNTLELS 267
Query: 219 ARVLERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVVV 40
+RV+E + S++ SE +++ Q GL+ +KD+LLGKR+DH+FR VVV
Sbjct: 268 SRVIECMQYSRLFSENVSSSQDSANPYQKKSDTPKLCGLRFMKDVLLGKRSDHTFRTVVV 327
Query: 39 GDPGVKVHEIGLP 1
GDP +K+HEIG+P
Sbjct: 328 GDPSLKLHEIGIP 340
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 141 bits (355), Expect = 1e-31
Identities = 80/178 (44%), Positives = 105/178 (58%), Gaps = 6/178 (3%)
Frame = -3
Query: 516 VLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKTLEASFKRKNSIFLNSL 337
VL DYWD +PKD QE + L N+RVL AQV+ +LKD+ P ++ R +S FLN L
Sbjct: 169 VLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFFLNCL 228
Query: 336 LVTPNSHRVREF------GQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSKIRSE 175
VTPN+HRV E GQ + D+ ++ Y+KL+DFRG+ NELS
Sbjct: 229 PVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCH------------- 275
Query: 174 KLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPGVKVHEIGLP 1
SAS SGLK IK++LLGKRT+HSFRM+VVGDP +++ EIG+P
Sbjct: 276 ----------------SASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIP 317
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 135 bits (341), Expect = 5e-30
Identities = 68/122 (55%), Positives = 91/122 (74%)
Frame = -3
Query: 366 RKNSIFLNSLLVTPNSHRVREFGQRITVDETTKMYRKLIDFRGSPNELSARVLERYKLSK 187
RKNSIFL S L+TPNSHRV EFGQ + DE+ ++YRKLIDFRG+ N+LS VL+R K+SK
Sbjct: 3 RKNSIFLKSCLLTPNSHRVTEFGQHMIFDESNRLYRKLIDFRGTANDLSMCVLDRIKVSK 62
Query: 186 IRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVVVGDPGVKVHEIG 7
IR+ ++ ND + A+GLK +K+L+L KRT+H+FRMVVVGDP +++ EIG
Sbjct: 63 IRA----------DRSVINDPNAPATGLKYVKELVLAKRTNHAFRMVVVGDPNIELGEIG 112
Query: 6 LP 1
+P
Sbjct: 113 IP 114
>ref|XP_006300646.1| hypothetical protein CARUB_v10019657mg [Capsella rubella]
gi|482569356|gb|EOA33544.1| hypothetical protein
CARUB_v10019657mg [Capsella rubella]
Length = 1459
Score = 135 bits (341), Expect = 5e-30
Identities = 76/193 (39%), Positives = 112/193 (58%), Gaps = 8/193 (4%)
Frame = -3
Query: 555 EVGETSVSKCSDG---VLASDYWDVLPKDSAQENSSLPANKRVLLPAQVYDILKDVCPKT 385
EV E S+ K L DYW +PKDS + S L KR+L AQVY +L + +
Sbjct: 151 EVNEESLIKLKKQGTKTLPLDYWSFVPKDSNIDESCLKETKRILTHAQVYALLYGIDERL 210
Query: 384 LEASFKRKNSIFLNSLLVTPNSHRVREF-----GQRITVDETTKMYRKLIDFRGSPNELS 220
++ +S+ L S VTPN +RV E G R+ DE T++Y++L+ F G+ ELS
Sbjct: 211 IKKDIPMFDSLSLASFPVTPNGYRVTEIVHQSNGARLVFDERTRIYKRLVGFEGNTLELS 270
Query: 219 ARVLERYKLSKIRSEKLTNLQKVYEKQSTNDSASSASGLKNIKDLLLGKRTDHSFRMVVV 40
+RV+E + S++ SE +++ Q GL+ +KD+LLGKR+DH+FR +VV
Sbjct: 271 SRVVECMQYSRLFSETVSSSQDSANPYQKKPDTPKLCGLRFMKDVLLGKRSDHTFRAIVV 330
Query: 39 GDPGVKVHEIGLP 1
GDP +K+HEIG+P
Sbjct: 331 GDPALKLHEIGIP 343