BLASTX nr result
ID: Mentha22_contig00033394
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00033394
(680 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-bind... 79 3e-25
gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein ... 79 4e-24
ref|XP_007221496.1| hypothetical protein PRUPE_ppa010066mg [Prun... 79 5e-24
dbj|BAA25393.1| light harvesting chlorophyll a/b-binding protein... 77 1e-23
sp|P12329.1|CB21_MAIZE RecName: Full=Chlorophyll a-b binding pro... 79 1e-23
ref|XP_002460622.1| hypothetical protein SORBIDRAFT_02g032040 [S... 79 1e-23
ref|XP_004957570.1| PREDICTED: chlorophyll a-b binding protein 1... 79 1e-23
ref|XP_002302798.2| hypothetical protein POPTR_0002s19010g [Popu... 79 2e-23
gb|AAT08668.1| chloroplast chlorophyll A-B binding protein 40 [H... 77 3e-23
gb|EYU43278.1| hypothetical protein MIMGU_mgv1a011933mg [Mimulus... 79 4e-23
ref|NP_001147639.1| chlorophyll a-b binding protein 1, chloropla... 78 4e-23
gb|EYU29602.1| hypothetical protein MIMGU_mgv1a019986mg [Mimulus... 78 7e-23
ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 4... 86 3e-15
ref|XP_004164941.1| PREDICTED: chlorophyll a-b binding protein 4... 86 3e-15
gb|EXB69297.1| Chlorophyll a-b binding protein 40 [Morus notabilis] 85 4e-15
ref|XP_004293580.1| PREDICTED: chlorophyll a-b binding protein 4... 85 5e-15
ref|XP_004293579.1| PREDICTED: chlorophyll a-b binding protein 4... 85 5e-15
ref|NP_174286.1| chlorophyll A/B binding protein 1 [Arabidopsis ... 84 9e-15
gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense] 84 9e-15
ref|NP_564339.1| chlorophyll A/B binding protein 3 [Arabidopsis ... 84 1e-14
>gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Artemisia annua]
Length = 254
Score = 79.3 bits (194), Expect(3) = 3e-25
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 520 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
WDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 68 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 103
Score = 60.1 bits (144), Expect(3) = 3e-25
Identities = 30/49 (61%), Positives = 30/49 (61%)
Frame = +2
Query: 368 GNGRVSMRXXXXXXXXXXXXXXWYGPDRVKYLGQFSSEAPSNLTREFHG 514
GNGRVSMR WYGPDRVKYLG FS EAPS LT EF G
Sbjct: 16 GNGRVSMRKTAAPKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 64
Score = 22.7 bits (47), Expect(3) = 3e-25
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 113 KFGEAVWF 120
>gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Ginkgo biloba]
Length = 270
Score = 79.3 bits (194), Expect(3) = 4e-24
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 520 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
WDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 84 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 119
Score = 56.2 bits (134), Expect(3) = 4e-24
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = +2
Query: 368 GNGRVSMRXXXXXXXXXXXXXXWYGPDRVKYLGQFSSEAPSNLTREFHG 514
G GR++MR WYGPDRVKYLG FS EAPS LT EF G
Sbjct: 32 GEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 80
Score = 22.7 bits (47), Expect(3) = 4e-24
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 129 KFGEAVWF 136
>ref|XP_007221496.1| hypothetical protein PRUPE_ppa010066mg [Prunus persica]
gi|462418246|gb|EMJ22695.1| hypothetical protein
PRUPE_ppa010066mg [Prunus persica]
Length = 265
Score = 79.3 bits (194), Expect(3) = 5e-24
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 520 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
WDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 79 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 114
Score = 55.8 bits (133), Expect(3) = 5e-24
Identities = 30/49 (61%), Positives = 30/49 (61%)
Frame = +2
Query: 368 GNGRVSMRXXXXXXXXXXXXXXWYGPDRVKYLGQFSSEAPSNLTREFHG 514
GNGRVSMR WYGPDRVKYLG FS EAPS LT EF G
Sbjct: 28 GNGRVSMRRAARKPAVSSGSP-WYGPDRVKYLGPFSGEAPSYLTGEFPG 75
Score = 22.7 bits (47), Expect(3) = 5e-24
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 124 KFGEAVWF 131
>dbj|BAA25393.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 266
Score = 77.4 bits (189), Expect(3) = 1e-23
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 520 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
WDTAGLSADPETFAKNRELEVIH RWAMLGALGC+F
Sbjct: 80 WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 115
Score = 56.6 bits (135), Expect(3) = 1e-23
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = +2
Query: 368 GNGRVSMRXXXXXXXXXXXXXXWYGPDRVKYLGQFSSEAPSNLTREFHG 514
GNG+V+MR WYGPDRVKYLG FS E+PS LT EF G
Sbjct: 28 GNGKVTMRKTASKAKPVSSGSLWYGPDRVKYLGPFSGESPSYLTGEFPG 76
Score = 22.7 bits (47), Expect(3) = 1e-23
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 125 KFGEAVWF 132
>sp|P12329.1|CB21_MAIZE RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor gi|22224|emb|CAA32900.1| unnamed protein
product [Zea mays] gi|194699340|gb|ACF83754.1| unknown
[Zea mays] gi|195607416|gb|ACG25538.1| chlorophyll a-b
binding protein 2 [Zea mays] gi|195613460|gb|ACG28560.1|
chlorophyll a-b binding protein 2 [Zea mays]
gi|414886622|tpg|DAA62636.1| TPA: light harvesting
chlorophyll a/b binding protein2 [Zea mays]
Length = 262
Score = 79.3 bits (194), Expect(3) = 1e-23
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 520 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
WDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 76 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 111
Score = 54.3 bits (129), Expect(3) = 1e-23
Identities = 26/49 (53%), Positives = 28/49 (57%)
Frame = +2
Query: 368 GNGRVSMRXXXXXXXXXXXXXXWYGPDRVKYLGQFSSEAPSNLTREFHG 514
G GR++MR WYGPDRVKYLG FS E PS LT EF G
Sbjct: 24 GEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 72
Score = 22.7 bits (47), Expect(3) = 1e-23
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 121 KFGEAVWF 128
>ref|XP_002460622.1| hypothetical protein SORBIDRAFT_02g032040 [Sorghum bicolor]
gi|241923999|gb|EER97143.1| hypothetical protein
SORBIDRAFT_02g032040 [Sorghum bicolor]
Length = 262
Score = 79.3 bits (194), Expect(3) = 1e-23
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 520 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
WDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 76 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 111
Score = 54.3 bits (129), Expect(3) = 1e-23
Identities = 26/49 (53%), Positives = 28/49 (57%)
Frame = +2
Query: 368 GNGRVSMRXXXXXXXXXXXXXXWYGPDRVKYLGQFSSEAPSNLTREFHG 514
G GR++MR WYGPDRVKYLG FS E PS LT EF G
Sbjct: 24 GEGRITMRKTAAKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 72
Score = 22.7 bits (47), Expect(3) = 1e-23
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 121 KFGEAVWF 128
>ref|XP_004957570.1| PREDICTED: chlorophyll a-b binding protein 1, chloroplastic-like
[Setaria italica]
Length = 261
Score = 79.3 bits (194), Expect(3) = 1e-23
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 520 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
WDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 75 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 110
Score = 54.3 bits (129), Expect(3) = 1e-23
Identities = 26/49 (53%), Positives = 28/49 (57%)
Frame = +2
Query: 368 GNGRVSMRXXXXXXXXXXXXXXWYGPDRVKYLGQFSSEAPSNLTREFHG 514
G GR++MR WYGPDRVKYLG FS E PS LT EF G
Sbjct: 23 GEGRITMRKTAAKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 71
Score = 22.7 bits (47), Expect(3) = 1e-23
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 120 KFGEAVWF 127
>ref|XP_002302798.2| hypothetical protein POPTR_0002s19010g [Populus trichocarpa]
gi|550345350|gb|EEE82071.2| hypothetical protein
POPTR_0002s19010g [Populus trichocarpa]
Length = 266
Score = 79.3 bits (194), Expect(3) = 2e-23
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 520 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
WDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 80 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 115
Score = 53.9 bits (128), Expect(3) = 2e-23
Identities = 29/49 (59%), Positives = 29/49 (59%)
Frame = +2
Query: 368 GNGRVSMRXXXXXXXXXXXXXXWYGPDRVKYLGQFSSEAPSNLTREFHG 514
GNGRVSMR WYGPDRVKYLG FS E PS LT EF G
Sbjct: 30 GNGRVSMRKAAGKVADSGSP--WYGPDRVKYLGPFSGEPPSYLTGEFPG 76
Score = 22.7 bits (47), Expect(3) = 2e-23
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 125 KFGEAVWF 132
>gb|AAT08668.1| chloroplast chlorophyll A-B binding protein 40 [Hyacinthus
orientalis]
Length = 237
Score = 77.4 bits (189), Expect(3) = 3e-23
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 520 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
WDTAGLSADPETFAKNRELEVIH RWAMLGALGC+F
Sbjct: 66 WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 101
Score = 55.1 bits (131), Expect(3) = 3e-23
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = +2
Query: 368 GNGRVSMRXXXXXXXXXXXXXXWYGPDRVKYLGQFSSEAPSNLTREFHG 514
G+GR +MR WYGPDRVKYLG FS EAPS LT EF G
Sbjct: 14 GDGRFTMRKTVAKPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 62
Score = 22.7 bits (47), Expect(3) = 3e-23
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 111 KFGEAVWF 118
>gb|EYU43278.1| hypothetical protein MIMGU_mgv1a011933mg [Mimulus guttatus]
Length = 266
Score = 79.3 bits (194), Expect(3) = 4e-23
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 520 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
WDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 80 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 115
Score = 52.8 bits (125), Expect(3) = 4e-23
Identities = 29/50 (58%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 371 NGRVSMRXXXXXXXXXXXXXX--WYGPDRVKYLGQFSSEAPSNLTREFHG 514
NGRVSMR WYGPDRVKYLG FS EAPS LT EF G
Sbjct: 27 NGRVSMRKTAGKPKPKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFAG 76
Score = 22.7 bits (47), Expect(3) = 4e-23
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 125 KFGEAVWF 132
>ref|NP_001147639.1| chlorophyll a-b binding protein 1, chloroplastic precursor [Zea
mays] gi|195612774|gb|ACG28217.1| chlorophyll a-b
binding protein 2 [Zea mays]
Length = 262
Score = 77.8 bits (190), Expect(3) = 4e-23
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +1
Query: 520 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
WDTAGLSADP+TFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 76 WDTAGLSADPKTFAKNRELEVIHSRWAMLGALGCVF 111
Score = 54.3 bits (129), Expect(3) = 4e-23
Identities = 26/49 (53%), Positives = 28/49 (57%)
Frame = +2
Query: 368 GNGRVSMRXXXXXXXXXXXXXXWYGPDRVKYLGQFSSEAPSNLTREFHG 514
G GR++MR WYGPDRVKYLG FS E PS LT EF G
Sbjct: 24 GEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG 72
Score = 22.7 bits (47), Expect(3) = 4e-23
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 121 KFGEAVWF 128
>gb|EYU29602.1| hypothetical protein MIMGU_mgv1a019986mg [Mimulus guttatus]
Length = 260
Score = 78.2 bits (191), Expect(3) = 7e-23
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +1
Query: 520 WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
WDTAGLSADPETF+KNRELEVIHSRWAMLGALGC+F
Sbjct: 74 WDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVF 109
Score = 53.1 bits (126), Expect(3) = 7e-23
Identities = 27/46 (58%), Positives = 27/46 (58%)
Frame = +2
Query: 377 RVSMRXXXXXXXXXXXXXXWYGPDRVKYLGQFSSEAPSNLTREFHG 514
RVSMR WYGPDRVKYLG FS EAPS LT EF G
Sbjct: 25 RVSMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 70
Score = 22.7 bits (47), Expect(3) = 7e-23
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 119 KFGEAVWF 126
>ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
[Cucumis sativus]
Length = 265
Score = 85.5 bits (210), Expect(2) = 3e-15
Identities = 55/114 (48%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Frame = +1
Query: 307 MAASSMTLPSPSFAGRR-RGSRQWQSLDEEGRLQAQARFLRQ-----PMVRPGQGQVPRP 468
MAASSM L SPSFAG+ + + L R+ + + P P + + P
Sbjct: 1 MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
Query: 469 ILQ*SPEQPHQRIPWSV-WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
P P WDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 114
Score = 22.7 bits (47), Expect(2) = 3e-15
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 124 KFGEAVWF 131
>ref|XP_004164941.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like,
partial [Cucumis sativus]
Length = 149
Score = 85.5 bits (210), Expect(2) = 3e-15
Identities = 55/114 (48%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Frame = +1
Query: 307 MAASSMTLPSPSFAGRR-RGSRQWQSLDEEGRLQAQARFLRQ-----PMVRPGQGQVPRP 468
MAASSM L SPSFAG+ + + L R+ + + P P + + P
Sbjct: 1 MAASSMALSSPSFAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGP 60
Query: 469 ILQ*SPEQPHQRIPWSV-WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
P P WDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 114
Score = 22.7 bits (47), Expect(2) = 3e-15
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 124 KFGEAVWF 131
>gb|EXB69297.1| Chlorophyll a-b binding protein 40 [Morus notabilis]
Length = 265
Score = 85.1 bits (209), Expect(2) = 4e-15
Identities = 54/114 (47%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Frame = +1
Query: 307 MAASSMTLPSPSFAGRR-RGSRQWQSLDEEGRLQAQARFLR-----QPMVRPGQGQVPRP 468
MAAS+M L SPSFAG+ + + GR+ + R P P + + P
Sbjct: 1 MAASTMALSSPSFAGKAVELTPTANKVTGGGRVSMRKTGSRGASSGSPWYGPDRVKYLGP 60
Query: 469 ILQ*SPEQPHQRIPWSV-WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
P P WDTAGLSADPETFA+NRELEVIHSRWAMLGALGC+F
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVF 114
Score = 22.7 bits (47), Expect(2) = 4e-15
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 124 KFGEAVWF 131
>ref|XP_004293580.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 263
Score = 84.7 bits (208), Expect(2) = 5e-15
Identities = 54/113 (47%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Frame = +1
Query: 307 MAASSMTLPSPSFAGRRRGSRQWQSLDEEGRLQ-----AQARFLRQPMVRPGQGQVPRPI 471
MAAS+M L SP+FAG+ + GR+ +A P P + + P
Sbjct: 1 MAASTMALSSPTFAGKAVQLAPAEVFGT-GRISMRKTVGKAVSSGSPWYGPDRVKYLGPF 59
Query: 472 LQ*SPEQPHQRIPWSV-WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
P P WDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 60 SGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 112
Score = 22.7 bits (47), Expect(2) = 5e-15
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 122 KFGEAVWF 129
>ref|XP_004293579.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 263
Score = 84.7 bits (208), Expect(2) = 5e-15
Identities = 54/113 (47%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Frame = +1
Query: 307 MAASSMTLPSPSFAGRRRGSRQWQSLDEEGRLQ-----AQARFLRQPMVRPGQGQVPRPI 471
MAAS+M L SP+FAG+ + GR+ +A P P + + P
Sbjct: 1 MAASTMALSSPTFAGKAVQLAPTEVFGT-GRISMRKTVGKAVSSGSPWYGPDRVKYLGPF 59
Query: 472 LQ*SPEQPHQRIPWSV-WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
P P WDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 60 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 112
Score = 22.7 bits (47), Expect(2) = 5e-15
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 122 KFGEAVWF 129
>ref|NP_174286.1| chlorophyll A/B binding protein 1 [Arabidopsis thaliana]
gi|115783|sp|P04778.1|CB1C_ARATH RecName:
Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=Chlorophyll a-b protein 140;
Short=CAB-140; AltName: Full=LHCII type I CAB-1; Flags:
Precursor gi|9972353|gb|AAG10603.1|AC008030_3 Putative
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16226883|gb|AAL16289.1|AF428359_1 At1g29930/F1N18_23
[Arabidopsis thaliana] gi|16376|emb|CAA27543.1|
chlorophyll a/b binding protein (LHCP AB 140)
[Arabidopsis thaliana] gi|15010744|gb|AAK74031.1|
At1g29930/F1N18_23 [Arabidopsis thaliana]
gi|15293003|gb|AAK93612.1| putative photosystem II type
I chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|16648807|gb|AAL25594.1| At1g29930/F1N18_23
[Arabidopsis thaliana] gi|20258873|gb|AAM14108.1|
putative chlorophyll a/b-binding protein [Arabidopsis
thaliana] gi|332193030|gb|AEE31151.1| chlorophyll a-b
binding protein 1 [Arabidopsis thaliana]
Length = 267
Score = 84.0 bits (206), Expect(2) = 9e-15
Identities = 55/115 (47%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Frame = +1
Query: 307 MAASSMTLPSPSFAGRR-RGSRQWQSLDEEGRLQAQARFLRQ--PMVRPGQG----QVPR 465
MAAS+M L SP+FAG+ + S + GR+ + + P P G +
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 466 PILQ*SPEQPHQRIPWSV-WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
P SP P WDTAGLSADPETFA+NRELEVIHSRWAMLGALGC+F
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVF 115
Score = 22.7 bits (47), Expect(2) = 9e-15
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 125 KFGEAVWF 132
>gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense]
Length = 266
Score = 84.0 bits (206), Expect(2) = 9e-15
Identities = 54/115 (46%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Frame = +1
Query: 307 MAASSMTLPSPSFAGRR-RGSRQWQSLD------EEGRLQAQARFLRQPMVRPGQGQVPR 465
MAASSM L SP+ AG+ + + Q L +G + P P + +
Sbjct: 1 MAASSMALTSPALAGKPVKLTPSSQELGVAKFTMRKGATTKKVASSGSPWYGPDRVKYLG 60
Query: 466 PILQ*SPEQPHQRIPWSV-WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
P P P WDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+F
Sbjct: 61 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 115
Score = 22.7 bits (47), Expect(2) = 9e-15
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 125 KFGEAVWF 132
>ref|NP_564339.1| chlorophyll A/B binding protein 3 [Arabidopsis thaliana]
gi|18397288|ref|NP_564340.1| chlorophyll A/B-binding
protein 2 [Arabidopsis thaliana]
gi|317374860|sp|P0CJ48.1|CB1A_ARATH RecName:
Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=Chlorophyll a-b protein 165;
Short=CAB-165; AltName: Full=LHCII type I CAB-2; Flags:
Precursor gi|317374942|sp|Q8VZ87.2|CB1B_ARATH RecName:
Full=Chlorophyll a-b binding protein 3, chloroplastic;
AltName: Full=Chlorophyll a-b protein 180;
Short=CAB-180; AltName: Full=LHCII type I CAB-3; Flags:
Precursor gi|9972354|gb|AAG10604.1|AC008030_4
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|9972355|gb|AAG10605.1|AC008030_5 chlorophyll
a/b-binding protein [Arabidopsis thaliana]
gi|16368|emb|CAA27540.1| chlorophyll a/b binding protein
(LHCP AB 65) [Arabidopsis thaliana]
gi|16372|emb|CAA27541.1| chlorophyll a/b binding protein
(LHCP AB 180) [Arabidopsis thaliana]
gi|15529226|gb|AAK97707.1| At1g29920/F1N18_80
[Arabidopsis thaliana] gi|15809862|gb|AAL06859.1|
At1g29920/F1N18_80 [Arabidopsis thaliana]
gi|16974375|gb|AAL31113.1| At1g29920/F1N18_80
[Arabidopsis thaliana] gi|17065476|gb|AAL32892.1|
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|20148487|gb|AAM10134.1| chlorophyll a/b-binding
protein [Arabidopsis thaliana]
gi|21555860|gb|AAM63949.1| photosystem II type I
chlorophyll a /b binding protein, putative [Arabidopsis
thaliana] gi|22135932|gb|AAM91548.1| photosystem II type
I chlorophyll a/b binding protein, putative [Arabidopsis
thaliana] gi|23397170|gb|AAN31868.1| putative
photosystem II type I chlorophyll a /b binding protein
[Arabidopsis thaliana] gi|332193028|gb|AEE31149.1|
chlorophyll A/B binding protein 3 [Arabidopsis thaliana]
gi|332193029|gb|AEE31150.1| chlorophyll A/B-binding
protein 2 [Arabidopsis thaliana]
Length = 267
Score = 83.6 bits (205), Expect(2) = 1e-14
Identities = 55/115 (47%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Frame = +1
Query: 307 MAASSMTLPSPSFAGRRRG-SRQWQSLDEEGRLQAQARFLRQ--PMVRPGQG----QVPR 465
MAAS+M L SP+FAG+ S + GR+ + + P P G +
Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 466 PILQ*SPEQPHQRIPWSV-WDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIF 627
P SP P WDTAGLSADPETFA+NRELEVIHSRWAMLGALGC+F
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVF 115
Score = 22.7 bits (47), Expect(2) = 1e-14
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 639 KFGEAVWF 662
KFGEAVWF
Sbjct: 125 KFGEAVWF 132