BLASTX nr result

ID: Mentha22_contig00033135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00033135
         (379 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234289.1| phototropin-2 [Solanum lycopersicum] gi|1540...    68   2e-09
gb|ABI48276.1| phototropin-2 [Solanum lycopersicum]                    68   2e-09
ref|XP_006347791.1| PREDICTED: phototropin-2-like isoform X1 [So...    67   3e-09
emb|CBI37708.3| unnamed protein product [Vitis vinifera]               59   9e-07

>ref|NP_001234289.1| phototropin-2 [Solanum lycopersicum] gi|154000865|gb|ABS57001.1|
           phototropin-2 [Solanum lycopersicum]
          Length = 952

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 13/99 (13%)
 Frame = -1

Query: 259 LEMERRSVDVFEPSPSRNDGVN-----RVQGSGVQVLPMQGEPSVVKTQ-----NKWMAF 110
           +E +RRS+DVF+P+ S +DG N     R +G  VQ + ++G  S  +T      NKWMAF
Sbjct: 1   MENQRRSIDVFDPA-STHDGANLASSSRNEGIDVQEISVKGAESASRTGTDKFINKWMAF 59

Query: 109 QSEPSKSEEDNET---AEKRIAERTAEWGLMIRTDVGDG 2
             + +   ++ ++    E  I+ER AEWGL +RTDVG+G
Sbjct: 60  DLKGNDQNDNADSQIPGETSISERAAEWGLTVRTDVGEG 98


>gb|ABI48276.1| phototropin-2 [Solanum lycopersicum]
          Length = 952

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 13/99 (13%)
 Frame = -1

Query: 259 LEMERRSVDVFEPSPSRNDGVN-----RVQGSGVQVLPMQGEPSVVKTQ-----NKWMAF 110
           +E +RRS+DVF+P+ S +DG N     R +G  VQ + ++G  S  +T      NKWMAF
Sbjct: 1   MENQRRSIDVFDPA-STHDGANLASSSRNEGIDVQEISVKGAESASRTGTDKFINKWMAF 59

Query: 109 QSEPSKSEEDNET---AEKRIAERTAEWGLMIRTDVGDG 2
             + +   ++ ++    E  I+ER AEWGL +RTDVG+G
Sbjct: 60  DLKGNDQNDNADSQIPGETSISERAAEWGLTVRTDVGEG 98


>ref|XP_006347791.1| PREDICTED: phototropin-2-like isoform X1 [Solanum tuberosum]
           gi|565362105|ref|XP_006347792.1| PREDICTED:
           phototropin-2-like isoform X2 [Solanum tuberosum]
          Length = 953

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 44/104 (42%), Positives = 60/104 (57%), Gaps = 18/104 (17%)
 Frame = -1

Query: 259 LEMERRSVDVFEPSPSRNDGVN-----RVQGSGVQVLPMQGEPSVVKT-----QNKWMAF 110
           +E +RRS+DVF+P+ + +DG N     R +G  VQ L M+G  S  +T      NKWMAF
Sbjct: 1   MENQRRSLDVFDPALT-HDGANLASSSRNEGIDVQELSMKGAESGSRTGTDKLMNKWMAF 59

Query: 109 --QSEPSKSEEDNETAEKRI------AERTAEWGLMIRTDVGDG 2
             +    K  ED   A+ +I      +ER AEWGL +RTDVG+G
Sbjct: 60  DPKGNDQKKGEDKGNADSQIPSETSISERAAEWGLTVRTDVGEG 103


>emb|CBI37708.3| unnamed protein product [Vitis vinifera]
          Length = 979

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
 Frame = -1

Query: 247 RRSVDVFEPSPSRN--------DGVNRVQGSGVQVLPMQGEPSVVKTQNKWMAFQSEPSK 92
           +++++VFEP+ S++         G N    +  QV+   G  S  +  NKWMAFQ E S 
Sbjct: 30  KQTLEVFEPARSQDLEQLRTDYKGDNEDIAASAQVVEQGG--SSREPINKWMAFQREASG 87

Query: 91  SEE--DNETAEKRIAERTAEWGLMIRTDVGDG 2
                DN      IAERTAEWGL++++D+GDG
Sbjct: 88  KSNVTDNSITASTIAERTAEWGLVMKSDLGDG 119


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