BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00030881
         (677 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Mimulus...   341   1e-91
gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]       305   9e-81
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...   273   3e-71
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein...   273   5e-71
ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ...   243   3e-62
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   243   4e-62
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   239   5e-61
ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein...   239   8e-61
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   238   1e-60
ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp....   238   1e-60
ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th...   238   1e-60
gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]               238   1e-60
ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas...   236   4e-60
ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Caps...   235   9e-60
ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutr...   234   2e-59
ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein...   233   3e-59
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   233   3e-59
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...   233   6e-59
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...   233   6e-59
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...   227   3e-57

>gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Mimulus guttatus]
          Length = 606

 Score =  341 bits (875), Expect = 1e-91
 Identities = 179/231 (77%), Positives = 194/231 (83%), Gaps = 6/231 (2%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQDRKGS-PPKAPTRSMRSKAERAGALDELVK 177
           ELEREMILEARATKRSDRDLTEKLKKRKGQDRKGS PPK  TR+MRSKA+RAGALDELVK
Sbjct: 119 ELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSSPPKTHTRNMRSKAQRAGALDELVK 178

Query: 178 RRRESAKGGSGKRYSPVKRRSFAAAT-----LNSPXXXXXXXXXXXXXXXXXXXLADSDD 342
           RRR++AKGGSG RYSPVKRRSFAAA      L+SP                   L DSDD
Sbjct: 179 RRRDAAKGGSGGRYSPVKRRSFAAAAATTTALSSPSRSDSGSHSDDGDSTGDGGLGDSDD 238

Query: 343 DKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGCFVRVGIGKSRSGPIYRLCV 522
           DK+S  SKVPTFEDI+EITIRRSKL+KWFMEP+FDELIVGCFVRVGIGKSRSG IYRLCV
Sbjct: 239 DKVS--SKVPTFEDIKEITIRRSKLSKWFMEPFFDELIVGCFVRVGIGKSRSGSIYRLCV 296

Query: 523 VRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAMISDSPPLKEE 675
           VRNVDATDPDR+YK DNKTT K+LNVVWG++SSAARWQMAM+SDS P +EE
Sbjct: 297 VRNVDATDPDRKYKLDNKTTSKWLNVVWGSESSAARWQMAMVSDSAPQREE 347


>gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]
          Length = 643

 Score =  305 bits (781), Expect = 9e-81
 Identities = 154/227 (67%), Positives = 182/227 (80%), Gaps = 2/227 (0%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSM-RSKAERAGALDELVK 177
           ELEREMILE RATK SDRDLTEKLKKRKG D+K SP KA TRS  RSKAERAGALDELVK
Sbjct: 115 ELEREMILEGRATKISDRDLTEKLKKRKGHDKKLSPAKAHTRSSTRSKAERAGALDELVK 174

Query: 178 RRRESAKGGSGK-RYSPVKRRSFAAATLNSPXXXXXXXXXXXXXXXXXXXLADSDDDKIS 354
           RRR++ KGG+ + RYSPVKRRSF AATL+SP                   + DSD+DK  
Sbjct: 175 RRRDAVKGGTTRSRYSPVKRRSFTAATLSSPSHSDSRSQSGEGESTGDGGIGDSDEDKTQ 234

Query: 355 AESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGCFVRVGIGKSRSGPIYRLCVVRNV 534
           ++S VPTF+DI+EIT++RSKL KWFMEP+FDELI+GCFV+VGIGKSRSG +YRLCVVRNV
Sbjct: 235 SQSNVPTFDDIKEITVQRSKLLKWFMEPFFDELIIGCFVKVGIGKSRSGNVYRLCVVRNV 294

Query: 535 DATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAMISDSPPLKEE 675
           D++DP R Y F+N+ THKYL++VWG++SSAARWQM MIS+  P +EE
Sbjct: 295 DSSDPSRAYDFENRKTHKYLSLVWGSESSAARWQMKMISNEAPKREE 341


>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
           [Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
           PREDICTED: RNA polymerase-associated protein RTF1
           homolog isoform 2 [Solanum lycopersicum]
          Length = 645

 Score =  273 bits (699), Expect = 3e-71
 Identities = 148/247 (59%), Positives = 179/247 (72%), Gaps = 22/247 (8%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSMRSK-------AERAGA 159
           ELEREMIL  RA K+SDR L +K+ K + Q RK S P + +R MRS        A+R  A
Sbjct: 119 ELEREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDA 178

Query: 160 LDELVKRR-------------RESAKGGSGKR-YSPVKRRSFAAATL-NSPXXXXXXXXX 294
           L+E+  +R             R++A+ GSG R YSP+KRRSF AA+L +SP         
Sbjct: 179 LNEIRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESDSHS 238

Query: 295 XXXXXXXXXXLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGCFVR 474
                     + DSDDDK S ES++PTFEDI+EI+IRRSKLAKWFMEP+FDELIVGCFVR
Sbjct: 239 NEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVR 298

Query: 475 VGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAMISD 654
           VGIG+SRSGPIYRLCVVRNVDA+DP+RQYK +NKTT K+LNVVWGN++SAARWQMAMISD
Sbjct: 299 VGIGRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMISD 358

Query: 655 SPPLKEE 675
           SPPL++E
Sbjct: 359 SPPLRDE 365


>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
           tuberosum]
          Length = 652

 Score =  273 bits (697), Expect = 5e-71
 Identities = 147/247 (59%), Positives = 179/247 (72%), Gaps = 22/247 (8%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSMRSK-------AERAGA 159
           ELEREMIL  RA K+SDR L +K+ K + Q RK S P + +R MRS        A+R  A
Sbjct: 119 ELEREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDA 178

Query: 160 LDELVKRR-------------RESAKGGSGKR-YSPVKRRSFAAATL-NSPXXXXXXXXX 294
           L+E+  +R             R++A+ GSG R YSP+KRRSF AATL +SP         
Sbjct: 179 LNEIRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRGESDSHS 238

Query: 295 XXXXXXXXXXLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGCFVR 474
                     + DSDDDK S ES++PTFEDI+EI+IRRSKLAKWFMEP+FDELIVGCFVR
Sbjct: 239 NEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVR 298

Query: 475 VGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAMISD 654
           VGIG+SRSGPIYRLCVVRNVD++DP+RQYK +NKTT K+LNVVWGN++SAARWQMAM+SD
Sbjct: 299 VGIGRSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMVSD 358

Query: 655 SPPLKEE 675
           SPPL++E
Sbjct: 359 SPPLRDE 365


>ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao]
           gi|590624750|ref|XP_007025692.1| PAF1 complex component
           isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1|
           PAF1 complex component isoform 1 [Theobroma cacao]
           gi|508781058|gb|EOY28314.1| PAF1 complex component
           isoform 1 [Theobroma cacao]
          Length = 660

 Score =  243 bits (621), Expect = 3e-62
 Identities = 134/252 (53%), Positives = 169/252 (67%), Gaps = 27/252 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG--- 156
           ELERE+IL  RA KR D+  TEK++ ++  DR     K +PP   +R +RS A  A    
Sbjct: 123 ELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADRAA 182

Query: 157 ----ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXX 285
               AL+EL  +R            R++++G SG R  SPVKR+ F A++L+S       
Sbjct: 183 AKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSDSE 242

Query: 286 XXXXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIV 459
                          + DSDDD+       PTF+DI+EITIRRSKLAKWFMEP+F+ELIV
Sbjct: 243 SRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEELIV 302

Query: 460 GCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQM 639
           GC+VRVGIG+S+SGPIYRLC+VRNVDAT+P+R YK +NKTT+KYLNVVWGN+SSAARWQM
Sbjct: 303 GCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARWQM 362

Query: 640 AMISDSPPLKEE 675
           AMISDSPP +EE
Sbjct: 363 AMISDSPPQEEE 374


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
           gi|223541691|gb|EEF43239.1| RNA polymerase-associated
           protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  243 bits (620), Expect = 4e-62
 Identities = 134/251 (53%), Positives = 172/251 (68%), Gaps = 26/251 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG--- 156
           ELEREMIL  RA K+ D++LTE+++ ++  +R     K +PP   +R +R+ A  A    
Sbjct: 123 ELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADRAA 182

Query: 157 ----ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXX 285
               AL+EL  RR            R++++ GSG R +SP+KR+ F +A+L+S       
Sbjct: 183 AKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSSESES 242

Query: 286 XXXXXXXXXXXXX-LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVG 462
                         +ADSDDD     S+ PTF+DIREITIRRSKLAKWFMEP+F+ELIVG
Sbjct: 243 RSHSEDEGSTGDGGMADSDDDG-EPGSQGPTFDDIREITIRRSKLAKWFMEPWFEELIVG 301

Query: 463 CFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMA 642
           CFVRVGIG+S+SGPIYRLC+VRNVDA DPDR YK +NKTT+KYLNV+WGN+SSAARWQMA
Sbjct: 302 CFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQMA 361

Query: 643 MISDSPPLKEE 675
           MISDS P ++E
Sbjct: 362 MISDSAPTEDE 372


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
           max]
          Length = 656

 Score =  239 bits (611), Expect = 5e-61
 Identities = 131/250 (52%), Positives = 174/250 (69%), Gaps = 25/250 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG--- 156
           EL+REMIL  RATK+ D++L  K+  K+ KG+    RK SPP + +R MR+ A  A    
Sbjct: 122 ELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR-MRASARSADRSA 180

Query: 157 ---ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXXXX 291
              AL+EL  +R            RE+++    + +SP KR++F + +L+S         
Sbjct: 181 KNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSESESR 240

Query: 292 XXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 465
                        +ADSDDD+  A S+ P+F+DI+EITIRRSKLAKWFMEP+F+ELIVGC
Sbjct: 241 SHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVGC 300

Query: 466 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 645
           FVRVGIG+S++GPIYRLC+V+NVDA++PDRQYK +NKTT+KYLNVVWGN+SSAARWQMAM
Sbjct: 301 FVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAM 360

Query: 646 ISDSPPLKEE 675
           +SDS P++EE
Sbjct: 361 VSDSAPMEEE 370


>ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
           X1 [Cicer arietinum] gi|502142571|ref|XP_004505023.1|
           PREDICTED: RNA polymerase-associated protein RTF1
           homolog isoform X2 [Cicer arietinum]
          Length = 658

 Score =  239 bits (609), Expect = 8e-61
 Identities = 132/250 (52%), Positives = 173/250 (69%), Gaps = 25/250 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG--- 156
           EL+REMIL  RA+K+ D+ L  K+  K+ KG+     K SPP + +R MR+ A  A    
Sbjct: 124 ELQREMILSDRASKKDDKSLLGKIASKREKGKAIMTGKQSPPLSSSR-MRASARSADRSA 182

Query: 157 ---ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXXXX 291
              AL+EL  +R            RE+++    +R+SP KR+SF +A L+S         
Sbjct: 183 KNVALNELRAKRLKQQDPEARRRLREASRNSGPRRFSPPKRKSFTSANLSSSSHSDSDSR 242

Query: 292 XXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 465
                        +ADSDDD+  + S+ P+F+DI+EITIRRSKLAKWFMEP+F+ELIVGC
Sbjct: 243 SHSDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVGC 302

Query: 466 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 645
           FVRVGIG+S++GPIYRLC+V+NVD++DPDRQYK +N+TTHKYLNVVWGN+SSAARWQMAM
Sbjct: 303 FVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENRTTHKYLNVVWGNESSAARWQMAM 362

Query: 646 ISDSPPLKEE 675
           +SDS PL+EE
Sbjct: 363 VSDSFPLEEE 372


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
           X1 [Glycine max] gi|571466984|ref|XP_006583809.1|
           PREDICTED: RNA polymerase-associated protein RTF1
           homolog isoform X2 [Glycine max]
          Length = 656

 Score =  238 bits (608), Expect = 1e-60
 Identities = 130/250 (52%), Positives = 172/250 (68%), Gaps = 25/250 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG--- 156
           EL+REMIL  RATK+ D++L  K+  K+ KG+    RK SPP + +R MR+ A  A    
Sbjct: 122 ELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSR-MRASARSADRSA 180

Query: 157 ---ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXXXX 291
              AL+EL  +R            RE+++    + +SP KR+ F + +L+S         
Sbjct: 181 KNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSESESR 240

Query: 292 XXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 465
                        + DSDDD+  A S+ P+F+D++EITIRRSKLAKWFMEP+F+ELIVGC
Sbjct: 241 SHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEELIVGC 300

Query: 466 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 645
           FVRVGIG+S++GPIYRLC+V+NVDA++PDRQYK +NKTT+KYLNVVWGN+SSAARWQMAM
Sbjct: 301 FVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAM 360

Query: 646 ISDSPPLKEE 675
           +SDS PL+EE
Sbjct: 361 VSDSAPLEEE 370


>ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata]
           gi|297333952|gb|EFH64370.1| At1g61040/T7P1_17
           [Arabidopsis lyrata subsp. lyrata]
          Length = 643

 Score =  238 bits (608), Expect = 1e-60
 Identities = 130/250 (52%), Positives = 167/250 (66%), Gaps = 25/250 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG--- 156
           E +REMIL  RA K+ D++ TEKL+ ++  ++     K + P   +R +RS A  A    
Sbjct: 118 EFQREMILAERADKKGDKNFTEKLRSKRENEKTPVSKKETQPLPASRGVRSSARSADRAA 177

Query: 157 ----ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXX 285
               AL+EL  +R            R+++KGGSG R +S +KR+  A++ L+S       
Sbjct: 178 AKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSMKRKPLASSNLSSSSQSDSD 237

Query: 286 XXXXXXXXXXXXXLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 465
                        + DSDDD+    S VPTFED++EITIRRSKLAKW MEP+F+ELIVGC
Sbjct: 238 SRSQSDDEGSNAGMLDSDDDR----SDVPTFEDVKEITIRRSKLAKWLMEPFFEELIVGC 293

Query: 466 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 645
           FVRVGIG+S+SGPIYRLC V+NVDATDPD+ YK +NKTTHKYLNVVWGN++SAARWQMAM
Sbjct: 294 FVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAM 353

Query: 646 ISDSPPLKEE 675
           ISD  PL+EE
Sbjct: 354 ISDGHPLEEE 363


>ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana]
           gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein;
           78902-80833 [Arabidopsis thaliana]
           gi|332195649|gb|AEE33770.1| Paf1C-like transcription
           factor [Arabidopsis thaliana]
          Length = 643

 Score =  238 bits (607), Expect = 1e-60
 Identities = 129/250 (51%), Positives = 166/250 (66%), Gaps = 25/250 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG--- 156
           E +REMIL  RA K+ D++ TEKL+ ++  ++     K + P   +R +RS A  A    
Sbjct: 118 EFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRAA 177

Query: 157 ----ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXX 285
               AL+EL  +R            R+++KGGSG R +S  KR+  A++ L+S       
Sbjct: 178 AKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDSD 237

Query: 286 XXXXXXXXXXXXXLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 465
                        + DSDDD+    S VPTFED++E+TIRRSKLAKW MEP+F+ELIVGC
Sbjct: 238 SRSQSDDEGSNGGMLDSDDDR----SDVPTFEDVKEVTIRRSKLAKWLMEPFFEELIVGC 293

Query: 466 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 645
           FVRVGIG+S+SGPIYRLC V+NVDATDPD+ YK +NKTTHKYLNVVWGN++SAARWQMAM
Sbjct: 294 FVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAM 353

Query: 646 ISDSPPLKEE 675
           ISD  PL+EE
Sbjct: 354 ISDGHPLEEE 363


>gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]
          Length = 643

 Score =  238 bits (607), Expect = 1e-60
 Identities = 129/250 (51%), Positives = 166/250 (66%), Gaps = 25/250 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG--- 156
           E +REMIL  RA K+ D++ TEKL+ ++  ++     K + P   +R +RS A  A    
Sbjct: 118 EFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRAA 177

Query: 157 ----ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXX 285
               AL+EL  +R            R+++KGGSG R +S  KR+  A++ L+S       
Sbjct: 178 AKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDSD 237

Query: 286 XXXXXXXXXXXXXLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 465
                        + DSDDD+    S VPTFED++E+TIRRSKLAKW MEP+F+ELIVGC
Sbjct: 238 SRSQSDDEGSNGGMLDSDDDR----SDVPTFEDVKEVTIRRSKLAKWLMEPFFEELIVGC 293

Query: 466 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 645
           FVRVGIG+S+SGPIYRLC V+NVDATDPD+ YK +NKTTHKYLNVVWGN++SAARWQMAM
Sbjct: 294 FVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAM 353

Query: 646 ISDSPPLKEE 675
           ISD  PL+EE
Sbjct: 354 ISDGHPLEEE 363


>ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
           gi|561032714|gb|ESW31293.1| hypothetical protein
           PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  236 bits (603), Expect = 4e-60
 Identities = 130/250 (52%), Positives = 171/250 (68%), Gaps = 25/250 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG--- 156
           EL+REMIL  RATK+ D++L  K+  K+ KG+    RK SPP + +R MR+ A  A    
Sbjct: 123 ELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMSSSR-MRASARSADRSA 181

Query: 157 ---ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXXXX 291
              AL+EL  +R            RE+++    + +SP KR+ F + +L+S         
Sbjct: 182 KNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFSPPKRKPFTSTSLSSSSHSESESR 241

Query: 292 XXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 465
                        + DSDDD+    S+ P+F+DI+EITIRRSKLAKWFMEP+F+ELIVGC
Sbjct: 242 SHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVGC 301

Query: 466 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 645
           FVRVGIG+S++GPIYRLC+V+NVDA++PDRQYK +NKTT+KYLNVVWGN+SSAARWQMAM
Sbjct: 302 FVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAM 361

Query: 646 ISDSPPLKEE 675
           +SDS PL+EE
Sbjct: 362 VSDSAPLEEE 371


>ref|XP_006300844.1| hypothetical protein CARUB_v10019938mg [Capsella rubella]
           gi|482569554|gb|EOA33742.1| hypothetical protein
           CARUB_v10019938mg [Capsella rubella]
          Length = 644

 Score =  235 bits (600), Expect = 9e-60
 Identities = 130/250 (52%), Positives = 168/250 (67%), Gaps = 25/250 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG--- 156
           E +REMIL  RA K+ D++ TEKL+ ++  ++     K + P   +R +RS A  A    
Sbjct: 120 EFQREMILAERADKKGDKNFTEKLRSKRENEKTPVSKKETQPLPASRGVRSSARSADRAA 179

Query: 157 ----ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXX 285
               AL+EL  +R            R+++KGGSG R +S +KR+  A++ L++       
Sbjct: 180 AKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSLKRKPLASSNLSNSSQSDSD 239

Query: 286 XXXXXXXXXXXXXLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 465
                        L DSDDD+    S +PTFEDI+EITIRRSKLAKW MEP+F+ELIVGC
Sbjct: 240 SRSQSDDEGSNAGL-DSDDDR----SDMPTFEDIKEITIRRSKLAKWLMEPFFEELIVGC 294

Query: 466 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 645
           FVRVGIG+S+SGPIYRLC+VRNVDATDPD+ YK +NKTTHKYLNV+WGN++SAARWQMAM
Sbjct: 295 FVRVGIGRSKSGPIYRLCMVRNVDATDPDKTYKLENKTTHKYLNVIWGNETSAARWQMAM 354

Query: 646 ISDSPPLKEE 675
           ISD  PL+EE
Sbjct: 355 ISDGHPLEEE 364


>ref|XP_006392066.1| hypothetical protein EUTSA_v10023338mg [Eutrema salsugineum]
           gi|557088572|gb|ESQ29352.1| hypothetical protein
           EUTSA_v10023338mg [Eutrema salsugineum]
          Length = 644

 Score =  234 bits (597), Expect = 2e-59
 Identities = 126/250 (50%), Positives = 168/250 (67%), Gaps = 25/250 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG--- 156
           E +REMIL  RA K+ D++ TEKL+ ++ +++     K + P   +R +RS A  A    
Sbjct: 120 EFQREMILAERADKKGDKNFTEKLRSKREKEKTPVSKKETQPLPASRGVRSSARSADRAA 179

Query: 157 ----ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXX 285
               AL+EL  +R            R+++KGGSG R +S +KR+  A++ L++       
Sbjct: 180 AKDDALNELRAKRMKQQEPASLRKLRDASKGGSGSRDFSSMKRKPLASSNLSNSSQSDSD 239

Query: 286 XXXXXXXXXXXXXLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 465
                        + DSDDD+    S VPTFEDI++ITIRRSKLAKW MEP+F+ELIVGC
Sbjct: 240 SRSQSDDEGSNGGMVDSDDDR----SDVPTFEDIKDITIRRSKLAKWLMEPFFEELIVGC 295

Query: 466 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 645
           FVRVGIG+S++GPIYRLC+V+NVDATDPD+ YK +NKTTHKYLN +WG++SSAARWQMAM
Sbjct: 296 FVRVGIGRSKNGPIYRLCMVKNVDATDPDKTYKLENKTTHKYLNCIWGHESSAARWQMAM 355

Query: 646 ISDSPPLKEE 675
           ISD  PL+EE
Sbjct: 356 ISDGYPLEEE 365


>ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
           X1 [Cicer arietinum] gi|502110282|ref|XP_004493843.1|
           PREDICTED: RNA polymerase-associated protein RTF1
           homolog isoform X2 [Cicer arietinum]
          Length = 653

 Score =  233 bits (595), Expect = 3e-59
 Identities = 133/255 (52%), Positives = 169/255 (66%), Gaps = 30/255 (11%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKL--KKRKGQ----DRKGSPP--------KAPTRSMRS 138
           EL+REMIL  RA+K+ D+D   K+  K+ KG      R+ SPP        +A  RS   
Sbjct: 114 ELQREMILSDRASKKDDKDFLGKIASKREKGAKATLSRRESPPPPLLSSRVRASARSADR 173

Query: 139 KAERAGALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXX 282
            A + GAL+EL  +R            +E +K G G+    +K + FA+  L+S      
Sbjct: 174 SAAKDGALNELRAKRLKQLDPEAKLKLKEGSKSG-GRGLFSLKGKPFASTGLSSSSHSDS 232

Query: 283 XXXXXXXXXXXXXX--LADSDDDKISAES--KVPTFEDIREITIRRSKLAKWFMEPYFDE 450
                           + DSDDD+I   S  +VP+FEDI+EITIRRSKLAKWFMEP+F+E
Sbjct: 233 DSRSRSDDEGSNGDGGIIDSDDDRIMTGSGFEVPSFEDIKEITIRRSKLAKWFMEPFFEE 292

Query: 451 LIVGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAAR 630
           LIVGCFVRVGIG+S++GPIYRLC+V+NVDA+DPDRQYK DNKTT+KYLNVVWGN++SAAR
Sbjct: 293 LIVGCFVRVGIGRSKTGPIYRLCMVKNVDASDPDRQYKLDNKTTYKYLNVVWGNETSAAR 352

Query: 631 WQMAMISDSPPLKEE 675
           WQMAM+SDSPPL+EE
Sbjct: 353 WQMAMVSDSPPLEEE 367


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
           sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
           polymerase-associated protein RTF1 homolog [Cucumis
           sativus]
          Length = 660

 Score =  233 bits (595), Expect = 3e-59
 Identities = 127/251 (50%), Positives = 169/251 (67%), Gaps = 26/251 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKR--KGQD---RKGSPP--KAPTRSMRSKAERAGA 159
           EL+REMIL  RA+K++D+ L E L+ +  KG+    RK +PP   +  RS    A+RA A
Sbjct: 123 ELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRAAA 182

Query: 160 LDELV----------------KRRRESAKGGSG-KRYSPVKRRSFAAATLNSPXXXXXXX 288
            D+ +                ++ R++++G +  +R+SP KR+ F A +L+S        
Sbjct: 183 KDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSESES 242

Query: 289 XXXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVG 462
                         + DSDD++    S  PTFEDI+E+TIRRSKLAKW MEP+F+ELIVG
Sbjct: 243 RFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELIVG 302

Query: 463 CFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMA 642
           CFVRVGIG+SRSGPIYRLC+VRNVDAT+PDRQYK +NK THKYLNV+WGN++SAARWQMA
Sbjct: 303 CFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQMA 362

Query: 643 MISDSPPLKEE 675
           M+SDS PL++E
Sbjct: 363 MVSDSAPLEDE 373


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
           X1 [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
           PREDICTED: RNA polymerase-associated protein RTF1
           homolog isoform X2 [Citrus sinensis]
          Length = 643

 Score =  233 bits (593), Expect = 6e-59
 Identities = 128/251 (50%), Positives = 167/251 (66%), Gaps = 26/251 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQ----DRKGSPPKAPTRSMR---SKAERAGA 159
           ELEREM++  R  K+ D++L +K + R+ +      K +PP   +RS R     A+RA A
Sbjct: 110 ELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAA 169

Query: 160 LDELV----------------KRRRESAKGGSGKRY-SPVKRRSFAAATLNSPXXXXXXX 288
            D+ +                +R R++++GGSG R  SPVKR++F  A L+S        
Sbjct: 170 KDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESES 229

Query: 289 XXXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVG 462
                         +ADSDDD      + PT++DI+EITIRRSKLAKWFMEP+F+ELIVG
Sbjct: 230 RSHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVG 288

Query: 463 CFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMA 642
           CFVRVGIG+S++GPIYRLC+VRNVDAT+PDR YK +N+TT KYLNV WGN+SSAARWQMA
Sbjct: 289 CFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMA 348

Query: 643 MISDSPPLKEE 675
           M+SDSPPL+EE
Sbjct: 349 MVSDSPPLEEE 359


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
           gi|557524836|gb|ESR36142.1| hypothetical protein
           CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score =  233 bits (593), Expect = 6e-59
 Identities = 128/251 (50%), Positives = 167/251 (66%), Gaps = 26/251 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQ----DRKGSPPKAPTRSMR---SKAERAGA 159
           ELEREM++  R  K+ D++L +K + R+ +      K +PP   +RS R     A+RA A
Sbjct: 110 ELEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAA 169

Query: 160 LDELV----------------KRRRESAKGGSGKRY-SPVKRRSFAAATLNSPXXXXXXX 288
            D+ +                +R R++++GGSG R  SPVKR++F  A L+S        
Sbjct: 170 KDDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESES 229

Query: 289 XXXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVG 462
                         +ADSDDD      + PT++DI+EITIRRSKLAKWFMEP+F+ELIVG
Sbjct: 230 RSHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVG 288

Query: 463 CFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMA 642
           CFVRVGIG+S++GPIYRLC+VRNVDAT+PDR YK +N+TT KYLNV WGN+SSAARWQMA
Sbjct: 289 CFVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMA 348

Query: 643 MISDSPPLKEE 675
           M+SDSPPL+EE
Sbjct: 349 MVSDSPPLEEE 359


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
           gi|222848649|gb|EEE86196.1| plus-3 domain-containing
           family protein [Populus trichocarpa]
          Length = 662

 Score =  227 bits (578), Expect = 3e-57
 Identities = 124/251 (49%), Positives = 168/251 (66%), Gaps = 26/251 (10%)
 Frame = +1

Query: 1   ELEREMILEARATKRSDRDLTEKLKKRKGQD-----RKGSPPKAPTRSMRSKAERAG--- 156
           EL+RE+IL  RA K+ D+ LTEK++ ++  D     RK +PP   +R +RS A  A    
Sbjct: 124 ELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSSRGVRSSARSADRAA 183

Query: 157 ----ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXX 285
               AL+EL  +R            R+ ++G +G R +S VK+ +F +A+L+S       
Sbjct: 184 AKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSSSSSESGS 243

Query: 286 XXXXXXXXXXXXX-LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVG 462
                         +ADSD+D +   SK PT+EDI+EITIRR+KLAKWFMEP+F+ELI+G
Sbjct: 244 RSHSEDEGSTGDGGMADSDED-VEPGSKGPTYEDIKEITIRRTKLAKWFMEPWFEELIIG 302

Query: 463 CFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMA 642
           CFVRVGIG+S+SGP+YRLC+VRNVDA +PD+ YK +NK+T+KYLNV WG D+SAARWQMA
Sbjct: 303 CFVRVGIGRSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSAARWQMA 362

Query: 643 MISDSPPLKEE 675
           M+SDS P +EE
Sbjct: 363 MVSDSGPTEEE 373