BLASTX nr result
ID: Mentha22_contig00030569
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha22_contig00030569 (3020 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus... 1413 0.0 gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 1411 0.0 ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 1384 0.0 ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 1384 0.0 ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 1380 0.0 ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 1370 0.0 emb|CBI16226.3| unnamed protein product [Vitis vinifera] 1366 0.0 ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 1353 0.0 ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 1331 0.0 ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 1319 0.0 ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 1279 0.0 ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 1260 0.0 ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab... 1258 0.0 ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 1253 0.0 ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps... 1249 0.0 ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 1248 0.0 ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas... 1248 0.0 ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 1243 0.0 dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar... 1242 0.0 ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana... 1242 0.0 >gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus] Length = 1394 Score = 1413 bits (3657), Expect = 0.0 Identities = 709/931 (76%), Positives = 792/931 (85%), Gaps = 7/931 (0%) Frame = -1 Query: 2774 RDQGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGL 2595 + GT+QFTK+PY+EDVGPR+IESIQFST S ++ K EV+V + YYDE RKP+ GL Sbjct: 2 KKSGTIQFTKRPYVEDVGPRRIESIQFSTFSAAEVLKAGEVEVNKIAYYDENRKPIDNGL 61 Query: 2594 LDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRI 2415 LD MGP NKS C+TC F +CPGH G+L LALPV+NVG+ TI+ I+KCICK CSR+ Sbjct: 62 LDQRMGPANKSILCKTCGGKFVDCPGHYGYLPLALPVYNVGFFLTIIDILKCICKNCSRV 121 Query: 2414 LLKEKDRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKR 2235 LL +KD Q FL++MR+PK E LKK +I K +V KCNS+ G +++AV+CSRCGY+NGMVK+ Sbjct: 122 LLADKDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSLAG-SKRAVKCSRCGYINGMVKK 180 Query: 2234 --QQLKIIHERRNIADNGLDEFRSALSHTQ---ANVSLPSTIDAKMVYELLKNMRDEDCE 2070 + LKI H+R + DN LDE RSAL+HT+ N + STID K Y LL+NM DEDCE Sbjct: 181 AKEPLKIQHDRAKVVDNCLDERRSALAHTKDIKGNPVVISTIDPKTAYHLLENMLDEDCE 240 Query: 2069 LLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE 1890 LLYL+DRPEKL+VT+ILVPP AIRPSVF SNENDIT RLK IIQ NA + EM++ Sbjct: 241 LLYLHDRPEKLIVTNILVPPIAIRPSVFSTRA-MSNENDITSRLKQIIQINAAVLQEMSD 299 Query: 1889 --TESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLS 1716 ++SQ +NW+ L+ EVAQYINS+ R S+ N++PLSGF+QRLKGKQGRFRGNLS Sbjct: 300 QSSQSQSLTNNWDSLQVEVAQYINSDVRVPLQYSE-NTKPLSGFVQRLKGKQGRFRGNLS 358 Query: 1715 GKRVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPG 1536 GKRVEFTGRTVISPDPNLKI EVAVPILMA+IL+YPERVSHHNIE+LRQ VRNGP KYPG Sbjct: 359 GKRVEFTGRTVISPDPNLKINEVAVPILMAQILSYPERVSHHNIERLRQCVRNGPTKYPG 418 Query: 1535 AKFIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRA 1356 AKFIK PDG EISL + R AD L+YG IV RHL+DGD++LFNRQPSLHRMSIMSHRA Sbjct: 419 AKFIKHPDGTEISLTGKIRHRAADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIMSHRA 478 Query: 1355 RIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEIL 1176 RIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEIL Sbjct: 479 RIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEIL 538 Query: 1175 VASTQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLF 996 VASTQDFLTSS+LITRKDTFYDR++FSL+CSY+GDAMD IDLPTPALVKPVELWTGKQLF Sbjct: 539 VASTQDFLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVELWTGKQLF 598 Query: 995 SVLLRPHAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKD 816 S+LLRPHAKMRVY+NLTVAEK+Y KS ETMCPKDGFVYIRNSELISGQLGKATLGNG+KD Sbjct: 599 SILLRPHAKMRVYVNLTVAEKNYGKSGETMCPKDGFVYIRNSELISGQLGKATLGNGSKD 658 Query: 815 GIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEY 636 G+YSVLLRDY HAAATCMNRLAKLSARWIGNHGFSIGINDVQPG LNKEKKVTID Y Sbjct: 659 GLYSVLLRDYSAHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGIVLNKEKKVTIDKGY 718 Query: 635 GHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMS 456 G C DYI Y SGSL+L PGC++AETLE+ I+ TLNNIRE TANVCM NL+WRNSPLIMS Sbjct: 719 GQCIDYIGSYKSGSLDLLPGCNNAETLEANITGTLNNIRERTANVCMNNLHWRNSPLIMS 778 Query: 455 QCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTG 276 QC ACVGQQSVGGRRAPNGF+DRTLPHFE+ AKDPDAKGFVQNSFYTG Sbjct: 779 QCDG-----------ACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFYTG 827 Query: 275 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFV 96 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLS+ YD TVRNAS CIVQFV Sbjct: 828 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDGTVRNASVCIVQFV 887 Query: 95 YGGDAMDPAQMEEKTGLPLNFERLFMKAKAT 3 YGGDAMDP QMEEK+GLPLNFERLFMKAKAT Sbjct: 888 YGGDAMDPGQMEEKSGLPLNFERLFMKAKAT 918 >gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea] Length = 1368 Score = 1411 bits (3652), Expect = 0.0 Identities = 688/921 (74%), Positives = 786/921 (85%), Gaps = 2/921 (0%) Frame = -1 Query: 2759 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 2580 +Q TKQPYIEDVG R+IESI FSTLSG+++ K + V+VY+G YYD +KPV GLLD M Sbjct: 1 LQSTKQPYIEDVGSRRIESINFSTLSGSEVLKTAVVEVYKGSYYDANKKPVSNGLLDMRM 60 Query: 2579 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 2400 GPPNK C TC NF CPGH G+L LALPV+NVGY+ IV I+KCICK CSR+LL+EK Sbjct: 61 GPPNKRSVCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVDILKCICKNCSRVLLEEK 120 Query: 2399 DRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKRQQLKI 2220 + FLR+MR+P+LE LKK D+ K IV +CNS G N K +C RCG++NGMVKR K+ Sbjct: 121 EHHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGSN-KLAKCPRCGHINGMVKRAPYKV 179 Query: 2219 IHERRNIADNGLDEFRSALSHTQANV-SLPSTIDAKMVYELLKNMRDEDCELLYLNDRPE 2043 +++R + D+ ++E +SA +A+ + ST+DA V+ LL+NM DEDCELLY++DRPE Sbjct: 180 MYDRGRVIDSQMEECQSAGPSMKASRGNTTSTLDALFVFRLLRNMLDEDCELLYIHDRPE 239 Query: 2042 KLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETES-QRFLS 1866 KLMVT+ILVPPTAIRPSVFVDGG QSNENDITERLK+II+ANA L ++ ET ++ ++ Sbjct: 240 KLMVTNILVPPTAIRPSVFVDGGTQSNENDITERLKYIIEANANLSQQLLETNIYKKGVT 299 Query: 1865 NWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTGRT 1686 +WE L+ EVAQYINS+ RGL +S+PLSGF+QRLKGKQGRFRGNLSGKRVE+TGRT Sbjct: 300 SWETLQIEVAQYINSDTRGLPLYGGGSSKPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRT 359 Query: 1685 VISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPDGH 1506 VISPDPNLKITEVAVPILMA+ILTYPERVSH NI +LR+ VR GP +YPGAKFI+ PDG Sbjct: 360 VISPDPNLKITEVAVPILMAKILTYPERVSHQNIAELRECVRRGPNEYPGAKFIRQPDGT 419 Query: 1505 EISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRF 1326 EISL + +RK HAD L+YG IV RHL+DGD+VLFNRQPSLHRMSIM HRARIMPWRTLRF Sbjct: 420 EISLRFSSRKIHADALKYGDIVDRHLKDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRF 479 Query: 1325 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTS 1146 NESVCNPYNADFDGDEMNMHVPQTEE+R EA+MLMGVQNNLCTPKNGE+LVASTQDFLTS Sbjct: 480 NESVCNPYNADFDGDEMNMHVPQTEESRAEAIMLMGVQNNLCTPKNGEVLVASTQDFLTS 539 Query: 1145 SFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHAKM 966 SFLITRKDTFYDRSAFSL+C+++ D + ++DLP PA+VKPVELWTGKQ+FSVLLRP Sbjct: 540 SFLITRKDTFYDRSAFSLICAFVSDGLGTVDLPMPAVVKPVELWTGKQIFSVLLRPDKDR 599 Query: 965 RVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVLLRDY 786 +V++NLTVAEK Y+KS ETMCP+DGFV IRNSELISGQLGKATLGNG+KDG+YS+LLRDY Sbjct: 600 KVFVNLTVAEKIYVKSGETMCPRDGFVCIRNSELISGQLGKATLGNGSKDGLYSILLRDY 659 Query: 785 GPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDYIRRY 606 G HAAA CMNRLAKLSARWIGNHGFSIGINDVQPGD LN EKK ID EYG C YI Y Sbjct: 660 GAHAAADCMNRLAKLSARWIGNHGFSIGINDVQPGDILNTEKKTVIDDEYGQCIRYIESY 719 Query: 605 TSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKGSPIN 426 SG LEL PGC+ AETLE+KI+ TLN IR+ TA VCM NL+WRNSPLIMSQCGSKGSPIN Sbjct: 720 KSGKLELLPGCNKAETLEAKITGTLNKIRDTTAEVCMTNLSWRNSPLIMSQCGSKGSPIN 779 Query: 425 ICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEFFFHT 246 ICQM+ACVGQQSVGGRRAPNGF+DRTLPHFE+GAKDPDAKGFVQNSFYTGL TEFFFHT Sbjct: 780 ICQMVACVGQQSVGGRRAPNGFLDRTLPHFERGAKDPDAKGFVQNSFYTGLLPTEFFFHT 839 Query: 245 MGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAMDPAQ 66 MGGREGLVDTAVKTADTGYMSRRLIKALEDLS+ YD+TVRNAS CIVQF YG D +DPAQ Sbjct: 840 MGGREGLVDTAVKTADTGYMSRRLIKALEDLSVQYDSTVRNASGCIVQFTYGDDGLDPAQ 899 Query: 65 MEEKTGLPLNFERLFMKAKAT 3 MEEKTG PLNFERLFMKAKAT Sbjct: 900 MEEKTGFPLNFERLFMKAKAT 920 >ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X2 [Solanum tuberosum] Length = 1243 Score = 1384 bits (3582), Expect = 0.0 Identities = 680/929 (73%), Positives = 787/929 (84%), Gaps = 3/929 (0%) Frame = -1 Query: 2780 MRRDQGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGG 2601 M+R Q ++Q TKQPYIEDVGPRKI+SI+FS S ++I K +EV+VY G YY+ +KP+ Sbjct: 1 MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60 Query: 2600 GLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCS 2421 GLLDP MGPPNK+G CETC NF CPGH G+L LALPV+NVGY+GT+V I+KCICK CS Sbjct: 61 GLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120 Query: 2420 RILLKEKDRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMV 2241 ILL +K+R+D L++MR+P+ E LKK+++ K +V +CN+M GG QK CS+CGY+NGMV Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGG-QKTATCSKCGYMNGMV 179 Query: 2240 KRQQLKIIHERRNIADNGLDEFRSALS---HTQANVSLPSTIDAKMVYELLKNMRDEDCE 2070 K+ QLKI HE+ N LDE A+S +A+VS+P +D K+VY L KNM DEDCE Sbjct: 180 KKLQLKITHEQGNRI---LDEINVAISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCE 236 Query: 2069 LLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE 1890 LLYL+DRPEKL+VTSI VPP AIRPSVFVDGG QSNENDITERLK IIQANA L EM++ Sbjct: 237 LLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSD 296 Query: 1889 TESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGK 1710 + + L+ W L+ EVAQYINS+ RG+ + Q+ RPLSGF QRLKGKQGRFRGNLSGK Sbjct: 297 SSPVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQ-RPLSGFTQRLKGKQGRFRGNLSGK 355 Query: 1709 RVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAK 1530 RVE+TGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQ VRNGP KYPGAK Sbjct: 356 RVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAK 415 Query: 1529 FIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARI 1350 FI+ PDG EISL++ +RK HAD+L++G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARI Sbjct: 416 FIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 475 Query: 1349 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1170 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVA Sbjct: 476 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVA 535 Query: 1169 STQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSV 990 STQDFLTSSFLITRKDTFY+R++FSL+CSY+GDAMD DLP+PA +KPVELWTGKQLF + Sbjct: 536 STQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHM 595 Query: 989 LLRPHAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGI 810 LLRP++KMRVY+NLTV EKSY ETMCP DGFVY RNSELISGQLGKATLGNGNKDG+ Sbjct: 596 LLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGL 655 Query: 809 YSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGH 630 YSVLLRDY HAAATCMNRLAKLSARWIGNHGFSIGI+DV PG+ L K+K+ I Y Sbjct: 656 YSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKK 715 Query: 629 CTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQC 450 C D I ++ G L + PGCD+A+TLE++++ +LN +R+ +CMK L+WRNSPLIMSQC Sbjct: 716 CEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQC 775 Query: 449 GSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLS 270 GSKGSPINI QMIACVGQQSVGGRRAP+GFIDR+LPHF +K P AKGFV +SF+ GLS Sbjct: 776 GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLS 835 Query: 269 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYG 90 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVRNASACIVQF+YG Sbjct: 836 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYG 895 Query: 89 GDAMDPAQMEEKTGLPLNFERLFMKAKAT 3 D MDP+QMEEK G PLNF RLFMK KAT Sbjct: 896 DDGMDPSQMEEKKGRPLNFSRLFMKVKAT 924 >ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Solanum tuberosum] Length = 1394 Score = 1384 bits (3582), Expect = 0.0 Identities = 680/929 (73%), Positives = 787/929 (84%), Gaps = 3/929 (0%) Frame = -1 Query: 2780 MRRDQGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGG 2601 M+R Q ++Q TKQPYIEDVGPRKI+SI+FS S ++I K +EV+VY G YY+ +KP+ Sbjct: 1 MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60 Query: 2600 GLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCS 2421 GLLDP MGPPNK+G CETC NF CPGH G+L LALPV+NVGY+GT+V I+KCICK CS Sbjct: 61 GLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120 Query: 2420 RILLKEKDRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMV 2241 ILL +K+R+D L++MR+P+ E LKK+++ K +V +CN+M GG QK CS+CGY+NGMV Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGG-QKTATCSKCGYMNGMV 179 Query: 2240 KRQQLKIIHERRNIADNGLDEFRSALS---HTQANVSLPSTIDAKMVYELLKNMRDEDCE 2070 K+ QLKI HE+ N LDE A+S +A+VS+P +D K+VY L KNM DEDCE Sbjct: 180 KKLQLKITHEQGNRI---LDEINVAISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCE 236 Query: 2069 LLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE 1890 LLYL+DRPEKL+VTSI VPP AIRPSVFVDGG QSNENDITERLK IIQANA L EM++ Sbjct: 237 LLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSD 296 Query: 1889 TESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGK 1710 + + L+ W L+ EVAQYINS+ RG+ + Q+ RPLSGF QRLKGKQGRFRGNLSGK Sbjct: 297 SSPVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQ-RPLSGFTQRLKGKQGRFRGNLSGK 355 Query: 1709 RVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAK 1530 RVE+TGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQ VRNGP KYPGAK Sbjct: 356 RVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAK 415 Query: 1529 FIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARI 1350 FI+ PDG EISL++ +RK HAD+L++G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARI Sbjct: 416 FIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 475 Query: 1349 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1170 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVA Sbjct: 476 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVA 535 Query: 1169 STQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSV 990 STQDFLTSSFLITRKDTFY+R++FSL+CSY+GDAMD DLP+PA +KPVELWTGKQLF + Sbjct: 536 STQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHM 595 Query: 989 LLRPHAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGI 810 LLRP++KMRVY+NLTV EKSY ETMCP DGFVY RNSELISGQLGKATLGNGNKDG+ Sbjct: 596 LLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGL 655 Query: 809 YSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGH 630 YSVLLRDY HAAATCMNRLAKLSARWIGNHGFSIGI+DV PG+ L K+K+ I Y Sbjct: 656 YSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKK 715 Query: 629 CTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQC 450 C D I ++ G L + PGCD+A+TLE++++ +LN +R+ +CMK L+WRNSPLIMSQC Sbjct: 716 CEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQC 775 Query: 449 GSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLS 270 GSKGSPINI QMIACVGQQSVGGRRAP+GFIDR+LPHF +K P AKGFV +SF+ GLS Sbjct: 776 GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLS 835 Query: 269 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYG 90 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVRNASACIVQF+YG Sbjct: 836 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYG 895 Query: 89 GDAMDPAQMEEKTGLPLNFERLFMKAKAT 3 D MDP+QMEEK G PLNF RLFMK KAT Sbjct: 896 DDGMDPSQMEEKKGRPLNFSRLFMKVKAT 924 >ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum lycopersicum] Length = 1390 Score = 1380 bits (3571), Expect = 0.0 Identities = 679/929 (73%), Positives = 785/929 (84%), Gaps = 3/929 (0%) Frame = -1 Query: 2780 MRRDQGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGG 2601 M R Q ++Q TKQPYIEDVGPRKI+SI+FS S ++I KL+EV+VY G YY+ +KP+ Sbjct: 1 MNRAQESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQN 60 Query: 2600 GLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCS 2421 GLLDP MGPPNKSG CETC NF CPGH G+L LALPV+NVGY+GT+V I+KCICK CS Sbjct: 61 GLLDPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120 Query: 2420 RILLKEKDRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMV 2241 ILL +K+R+D L++MR+P+ E LKK+++ K +V +CN+M GG QK CS+CGY+NGMV Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGG-QKTATCSKCGYMNGMV 179 Query: 2240 KRQQLKIIHERRNIADNGLDEFRSALS---HTQANVSLPSTIDAKMVYELLKNMRDEDCE 2070 K+ QLKI HE+ N LDE A+S +A+VS+P ID K+VY L KNM DEDCE Sbjct: 180 KKLQLKITHEQGNRI---LDEINVAISDKRELRASVSVPPEIDPKVVYSLFKNMSDEDCE 236 Query: 2069 LLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE 1890 LLYL+DRPEKL+VTSI VPP AIRPSVFVDGG QSNENDITERLK IIQANA L EM++ Sbjct: 237 LLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSD 296 Query: 1889 TESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGK 1710 + + L+ W L+ EVAQYINS+ RG+ Q RPLSGF QRLKGKQGRFRGNLSGK Sbjct: 297 SSPVKSLNQWIDLQMEVAQYINSDVRGVPLQMQP-PRPLSGFTQRLKGKQGRFRGNLSGK 355 Query: 1709 RVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAK 1530 RVE+TGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQ VRNGP KYPGAK Sbjct: 356 RVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAK 415 Query: 1529 FIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARI 1350 FI+ PDG+E+SL++ +RK +AD+L++G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARI Sbjct: 416 FIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 475 Query: 1349 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1170 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVA Sbjct: 476 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVA 535 Query: 1169 STQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSV 990 STQDFLTSSFLITRKDTFY+R++FSL+CSY+GDAMD DLP+PA +KPVELWTGKQLF V Sbjct: 536 STQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHV 595 Query: 989 LLRPHAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGI 810 LLRP++KMRVY+NLT+ EKSY ETMC DGFVY RNSELISGQLGKATLGNGNKDG+ Sbjct: 596 LLRPYSKMRVYVNLTLTEKSYSGKGETMCSSDGFVYFRNSELISGQLGKATLGNGNKDGL 655 Query: 809 YSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGH 630 YSVLLRDY HAAATCMNRLAKLSARWIGNHGFSIGI+DV PG+ L K+K+ I Y Sbjct: 656 YSVLLRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKK 715 Query: 629 CTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQC 450 C D I ++ G L + PGCD+A+TLE++++ +LN +R+ +CMK L+WRNSPLIMSQC Sbjct: 716 CEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQC 775 Query: 449 GSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLS 270 GSKGSPINI QMIACVGQQSVGGRRAP+GFIDR+LPHF +K P AKGFV +SF+ GLS Sbjct: 776 GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLS 835 Query: 269 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYG 90 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVRNASACIVQF+YG Sbjct: 836 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYG 895 Query: 89 GDAMDPAQMEEKTGLPLNFERLFMKAKAT 3 D MDP++MEEK G PLNF RLFMK KAT Sbjct: 896 DDGMDPSRMEEKKGRPLNFSRLFMKVKAT 924 >ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis vinifera] Length = 1383 Score = 1370 bits (3547), Expect = 0.0 Identities = 678/927 (73%), Positives = 782/927 (84%), Gaps = 8/927 (0%) Frame = -1 Query: 2759 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 2580 +QFTK+PYIEDVGPRKIESI+F+ S ++I K +EVQV++G YYD RKP+ GLLDP M Sbjct: 5 IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64 Query: 2579 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 2400 GP NK+G C TC NF +CPGHCG+LTLALPV+NVGY+ TIV I+KCICK CSR+LL EK Sbjct: 65 GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124 Query: 2399 DRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKR--QQL 2226 +D+L++MRS K+E LKK +++K IV KC +M ++KAV+CSRCGY+NG+VK+ L Sbjct: 125 ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMAS-SKKAVKCSRCGYMNGIVKKAVSVL 183 Query: 2225 KIIHERRNIADNGLDEFRSALSHTQ---ANVSLPSTIDAKMVYELLKNMRDEDCELLYLN 2055 IIH+R IAD L+E SA+SHT+ A+ S+ ++ V L K M DEDC+LL L Sbjct: 184 GIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243 Query: 2054 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETES-Q 1878 +RPEKL++T+I VPP AIRPSVF+DGG QSNEND+TERLK IIQANA L E+ +T S Sbjct: 244 ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303 Query: 1877 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 1698 + L+ W+ L+ EVAQYINS+ RG+ Q+ +RPLSGF+QRLKGKQGRFRGNLSGKRVE+ Sbjct: 304 KCLAGWDYLQIEVAQYINSDVRGVPLAMQA-ARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362 Query: 1697 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 1518 TGRTVISPDPNLKITEVA+PILMA+IL+YPERVSHHNIEKLRQ + NGP KYPGAK I+ Sbjct: 363 TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422 Query: 1517 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 1338 PDG SL++ RK AD+L+YG IV RHLEDGDVVLFNRQPSLHRMSIM HRARIMPWR Sbjct: 423 PDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 482 Query: 1337 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 1158 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD Sbjct: 483 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 542 Query: 1157 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 978 FLTSSFLITRKDTFYDR+AFSLMCSY+GD MD +DLPTPA++KPVELWTGKQLF+VLLRP Sbjct: 543 FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRP 602 Query: 977 HAKMRVYLNLTVAEKSYMK--SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYS 804 HA +RVYLNLTV EK+Y K KETMCP DGFVY RNSELISGQLGKATLGNGNKDG++S Sbjct: 603 HANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFS 662 Query: 803 VLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCT 624 VLLRDY HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG LN +K I+ Y +C Sbjct: 663 VLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCH 722 Query: 623 DYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGS 444 + I++Y G L+L PGC++A+TLE++I+ LN IRE TANVCM+ L+WRNSPLIMSQCGS Sbjct: 723 ELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGS 782 Query: 443 KGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSAT 264 KGSPINI QMIACVGQQSVGGRRAP+GFIDRTLPHF + +K PDAKGFV +SFYTGL+AT Sbjct: 783 KGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTAT 842 Query: 263 EFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGD 84 EFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI YD TVRNA+ IVQF+YG D Sbjct: 843 EFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDD 902 Query: 83 AMDPAQMEEKTGLPLNFERLFMKAKAT 3 MDPA+ME K G PLNF RLF+K KAT Sbjct: 903 GMDPARMEGKDGFPLNFNRLFLKVKAT 929 >emb|CBI16226.3| unnamed protein product [Vitis vinifera] Length = 1819 Score = 1366 bits (3536), Expect = 0.0 Identities = 676/927 (72%), Positives = 781/927 (84%), Gaps = 8/927 (0%) Frame = -1 Query: 2759 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 2580 +QFTK+PYIEDVGPRKIESI+F+ S ++I K +EVQV++G YYD RKP+ GLLDP M Sbjct: 5 IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64 Query: 2579 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 2400 GP NK+G C TC NF +CPGHCG+LTLALPV+NVGY+ TIV I+KCICK CSR+LL EK Sbjct: 65 GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124 Query: 2399 DRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKR--QQL 2226 +D+L++MRS K+E LKK +++K IV KC +M ++KAV+CSRCGY+NG+VK+ L Sbjct: 125 ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMAS-SKKAVKCSRCGYMNGIVKKAVSVL 183 Query: 2225 KIIHERRNIADNGLDEFRSALSHTQ---ANVSLPSTIDAKMVYELLKNMRDEDCELLYLN 2055 IIH+R IAD L+E SA+SHT+ A+ S+ ++ V L K M DEDC+LL L Sbjct: 184 GIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243 Query: 2054 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETES-Q 1878 +RPEKL++T+I VPP AIRPSVF+DGG QSNEND+TERLK IIQANA L E+ +T S Sbjct: 244 ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303 Query: 1877 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 1698 + L+ W+ L+ EVAQYINS+ RG+ Q+ +RPLSGF+QRLKGKQGRFRGNLSGKRVE+ Sbjct: 304 KCLAGWDYLQIEVAQYINSDVRGVPLAMQA-ARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362 Query: 1697 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 1518 TGRTVISPDPNLKITEVA+PILMA+IL+YPERVSHHNIEKLRQ + NGP KYPGAK I+ Sbjct: 363 TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422 Query: 1517 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 1338 PDG SL++ RK AD+L+YG IV RHLEDGDVVLFNRQPSLHRMSIM HRARIMPWR Sbjct: 423 PDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 482 Query: 1337 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 1158 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD Sbjct: 483 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 542 Query: 1157 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 978 FLTSSFLITRKDTFYDR+AFSLMCSY+GD MD +DLPTPA++K +ELWTGKQLF+VLLRP Sbjct: 543 FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFNVLLRP 602 Query: 977 HAKMRVYLNLTVAEKSYMK--SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYS 804 HA +RVYLNLTV EK+Y K KETMCP DGFVY RNSELISGQLGKATLGNGNKDG++S Sbjct: 603 HANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFS 662 Query: 803 VLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCT 624 VLLRDY HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG LN +K I+ Y +C Sbjct: 663 VLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCH 722 Query: 623 DYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGS 444 + I++Y G L+L PGC++A+TLE++I+ LN IRE TANVCM+ L+WRNSPLIMSQCGS Sbjct: 723 ELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGS 782 Query: 443 KGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSAT 264 KGSPINI QMIACVGQQSVGGRRAP+GFIDRTLPHF + +K PDAKGFV +SFYTGL+AT Sbjct: 783 KGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTAT 842 Query: 263 EFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGD 84 EFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI YD TVRNA+ IVQF+YG D Sbjct: 843 EFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDD 902 Query: 83 AMDPAQMEEKTGLPLNFERLFMKAKAT 3 MDPA+ME K G PLNF RLF+K KAT Sbjct: 903 GMDPARMEGKDGFPLNFNRLFLKVKAT 929 >ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao] gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] Length = 1395 Score = 1353 bits (3501), Expect = 0.0 Identities = 675/936 (72%), Positives = 773/936 (82%), Gaps = 18/936 (1%) Frame = -1 Query: 2756 QFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMG 2577 +FTK+PYIEDVGPRKI+SIQFS LS ++I K +EVQVYQ YYD + +P+ GGLLDP MG Sbjct: 4 KFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMG 63 Query: 2576 PPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKD 2397 P NKSGKC TC NF +CPGH G+L+LALPV+NVGY+ TI+ I+KCICK CSRI+L EK Sbjct: 64 PANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKL 123 Query: 2396 RQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKRQ--QLK 2223 +D+L+RMRSPK++ LKK DI+K+IV KC++M + KAV+C RCGYVNG VK+ L Sbjct: 124 CKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMA--SSKAVKCWRCGYVNGTVKKAVAMLG 181 Query: 2222 IIHERRNIADNGLDEFRSALSHTQANVS----LPSTIDAKMVYELLKNMRDEDCELLYLN 2055 IIH+R I DN L+EFRSA+SHT+ + + ++ V L K M D DCELLYL+ Sbjct: 182 IIHDRSKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLS 241 Query: 2054 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ- 1878 DRPEKL++T+I VPP IRPSV +DG QSNENDITERLK IIQANA LR E+ ET + Sbjct: 242 DRPEKLIITNIAVPPIPIRPSVIMDGS-QSNENDITERLKRIIQANASLRQELVETNAAF 300 Query: 1877 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 1698 + L WE+L+ EVAQYINS+ RG+ + Q S+PLSGF+QR+KGK GRFRGNLSGKRVE+ Sbjct: 301 KCLGGWEMLQVEVAQYINSDVRGVPFSMQV-SKPLSGFVQRIKGKHGRFRGNLSGKRVEY 359 Query: 1697 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 1518 TGRTVISPDPNLKITEVA+PI MARILTYPERVS+HNIEKLRQ VRNGP KYPGA+ ++ Sbjct: 360 TGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMVRY 419 Query: 1517 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 1338 PDG L+ + RK AD+L++GC+V RHLEDGD+VLFNRQPSLHRMSIM HRARIMPWR Sbjct: 420 PDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWR 479 Query: 1337 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 1158 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD Sbjct: 480 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 539 Query: 1157 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 978 FLTSSFLITRKD FYDR+AFSL+CSY+GD MD IDLPTPAL+KP+ELWTGKQLFSVLLRP Sbjct: 540 FLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLRP 599 Query: 977 HAKMRVYLNLTVAEKSYMK-----------SKETMCPKDGFVYIRNSELISGQLGKATLG 831 HA +RVYLNL V E++Y K ETMCP DGFVYIRNSELI GQLGKATLG Sbjct: 600 HASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELICGQLGKATLG 659 Query: 830 NGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVT 651 NGNKDG+YSVLLRDY HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG LN EK +T Sbjct: 660 NGNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKRLNDEKALT 719 Query: 650 IDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNS 471 I +Y C + I+ + G L+ PG D+A+TLE+ ++ LNNIR+ T VCMK L+WRNS Sbjct: 720 ISGDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVCMKELHWRNS 779 Query: 470 PLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQN 291 PLIMSQCGSKGS INI QMIACVGQQSVGGRRAPNGFIDR+LPHF +G+K P AKGFV N Sbjct: 780 PLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVAN 839 Query: 290 SFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASAC 111 SFY+GL+ATEFFFHTM GREGLVDTAVKTA+TGYMSRRLIKALEDLSI YDNTVRNAS C Sbjct: 840 SFYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGC 899 Query: 110 IVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKAT 3 IVQF+YG D MDPA ME K+G PLNF+RL MK KAT Sbjct: 900 IVQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKAT 935 >ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis sativus] Length = 1400 Score = 1331 bits (3444), Expect = 0.0 Identities = 668/926 (72%), Positives = 765/926 (82%), Gaps = 9/926 (0%) Frame = -1 Query: 2753 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 2574 FTKQPYIEDVGPRKI+S+QF+T SG +I KL+EVQVY+G YYD RKP+ GGLLDP MGP Sbjct: 11 FTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMGP 70 Query: 2573 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 2394 NK KC TC ANF +CPGH G++ LALPVFNVGY TI+ I+KCICK CSRILL+EK Sbjct: 71 ANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRILLEEKLF 130 Query: 2393 QDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKR--QQLKI 2220 +DFLR+MR+PKLE L+K D++K I+ KC+++ GN K+ CSRCGY+NG VK+ L I Sbjct: 131 KDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGN-KSTRCSRCGYLNGSVKKAVSMLGI 189 Query: 2219 IHERRNIADNGLDEFRSALSHTQANVSLPSTIDAKMVYELLKNMRDEDCELLYLNDRPEK 2040 +H R D G+ + +N ++ V L + M DEDCELL+L++RPEK Sbjct: 190 LHYRARSKDAGVVSEDLRAPYNVSN----DILNPFRVLCLFQRMSDEDCELLFLSNRPEK 245 Query: 2039 LMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ-RFLSN 1863 L++T++LVPP AIRPSV +DG QSNENDITERLK IIQ NA + E++ + SQ + L + Sbjct: 246 LIITNVLVPPIAIRPSVIMDGS-QSNENDITERLKRIIQQNASVSQELSTSNSQAKCLES 304 Query: 1862 WELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTGRTV 1683 W++L+ EVAQ INS+ RG+ + Q S+PL+GF+QRLKGKQGRFRGNL GKRVEFTGRTV Sbjct: 305 WDMLQSEVAQLINSDVRGIPFSMQV-SKPLAGFVQRLKGKQGRFRGNLCGKRVEFTGRTV 363 Query: 1682 ISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPDGHE 1503 ISPDPNLKITEVAVPI MARILTYPERV+ HNIEKLRQ V NGP KYPGA+ ++ DG Sbjct: 364 ISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARMLRHLDGSM 423 Query: 1502 ISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFN 1323 SL+ RK AD+L+YG IV RHLEDGDVVLFNRQPSLHRMSIM HR R+MPWRTLRFN Sbjct: 424 RSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFN 483 Query: 1322 ESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS 1143 ESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQDFLTSS Sbjct: 484 ESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS 543 Query: 1142 FLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHAKMR 963 FLITRKDTFYDR+AFSLMCSY+GD MD +DLPTPALVKP+ELWTGKQLFSVL+RPHA M+ Sbjct: 544 FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHASMK 603 Query: 962 VYLNLTVAEKSYMKSK------ETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSV 801 VYLNLTV EKSY K K ETMCP DGFVY RNSELISGQ+GKATLGNGNKDG+YSV Sbjct: 604 VYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGLYSV 663 Query: 800 LLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTD 621 LLRDY HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPGD L K+K+ TI Y C Sbjct: 664 LLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTTILEGYRDCDK 723 Query: 620 YIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSK 441 I + +G+L GCD+A++LESKI++ LN IREATANVCM+NL+WRNSPLIMSQCGSK Sbjct: 724 QINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHWRNSPLIMSQCGSK 783 Query: 440 GSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATE 261 GSPINI QM+ACVGQQSVGGRRAP+GFIDR+LPHF + AK P AKGFV NSFY+GL+ATE Sbjct: 784 GSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGLTATE 843 Query: 260 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDA 81 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI YD++VRNA CIVQF YG D Sbjct: 844 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDG 903 Query: 80 MDPAQMEEKTGLPLNFERLFMKAKAT 3 MDPAQME K+G PLNFERLF+KAKAT Sbjct: 904 MDPAQMEGKSGAPLNFERLFLKAKAT 929 >ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X2 [Citrus sinensis] Length = 1404 Score = 1319 bits (3413), Expect = 0.0 Identities = 662/948 (69%), Positives = 768/948 (81%), Gaps = 18/948 (1%) Frame = -1 Query: 2792 MQKEMRRDQGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRK 2613 M +++++ ++ FTKQPYIEDVGPRKIESIQFS +S ++I K +EVQVY+G+YY R Sbjct: 1 MTQQLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRV 60 Query: 2612 PVGGGLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCIC 2433 P+ GGLLDP MGP NKS C TC F+NCPGH G+LTLALPV+NVGY+ TI+ I+KCIC Sbjct: 61 PIEGGLLDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCIC 120 Query: 2432 KKCSRILLKEKDRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYV 2253 K CSR+LL+EK +D+L++MR+PK+E L+K D++K+IV KC++M KAV+C RCGY+ Sbjct: 121 KYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS---KAVKCPRCGYI 177 Query: 2252 NGMVKRQQ--LKIIHERRNIADNGLDEFRSALSHTQANVSLPST----IDAKMVYELLKN 2091 NGMVK+ L IIH+R + ++ L EF SA++HT+ + + + ++ V L K Sbjct: 178 NGMVKKAVAVLGIIHDRSKVTES-LQEFASAITHTKESKAAVNVATYILNPVNVLFLFKR 236 Query: 2090 MRDEDCELLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANAC 1911 M D DCE+LYL++RPEKL++T+I VPP AIRPSV +DG QSNENDITERLK IIQ NA Sbjct: 237 MTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGS-QSNENDITERLKRIIQTNAS 295 Query: 1910 LRSEMAETESQ-RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGR 1734 L+ E+ E S + L+ WE L+ EVAQYINS+ RG+ + Q +RPLSGF+QRLKGKQGR Sbjct: 296 LQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV-ARPLSGFVQRLKGKQGR 354 Query: 1733 FRGNLSGKRVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNG 1554 FRGNLSGKRVE+TGRTVISPDPNLKITEVA+PI MARILTYPERVS HNIEKLRQ ++NG Sbjct: 355 FRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNG 414 Query: 1553 PQKYPGAKFIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMS 1374 P KYPGA+ I+ PDG L + R A +L+ GCIV RHLEDGDVVLFNRQPSLHRMS Sbjct: 415 PDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMS 474 Query: 1373 IMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTP 1194 IM HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTP Sbjct: 475 IMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTP 534 Query: 1193 KNGEILVASTQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELW 1014 KNGEILVASTQDFLTSSFLITRKDTFYDR+AFSLMC Y+GD MD +DLPTPA++KPVELW Sbjct: 535 KNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELW 594 Query: 1013 TGKQLFSVLLRPHAKMRVYLNLTVAEKSYMKSK-----------ETMCPKDGFVYIRNSE 867 TGKQLFSVL+RPHA MRVY+NLTV EK+Y ETMCP DGFVY RNSE Sbjct: 595 TGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSE 654 Query: 866 LISGQLGKATLGNGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQ 687 LISGQLGKATLGNGNKDG+YSVLLRDYG HA + CMNRLAKLSARWIGNHGFSIGI+DVQ Sbjct: 655 LISGQLGKATLGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQ 714 Query: 686 PGDTLNKEKKVTIDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATA 507 P L+ +K I Y C I+ Y G L+L PGCD+A+TLE+ I++ LN IRE Sbjct: 715 PKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAG 774 Query: 506 NVCMKNLNWRNSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKG 327 CM +L WRNSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAPNGFIDR+LPHF + Sbjct: 775 KACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRK 834 Query: 326 AKDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI 147 AK+P AKGFV NSFY+GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI Sbjct: 835 AKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI 894 Query: 146 FYDNTVRNASACIVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKAT 3 YDN+VRNA CIVQF+YG D MDPA ME K+G PLNF+RL MK KAT Sbjct: 895 QYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKAT 942 >ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa] gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase family protein [Populus trichocarpa] Length = 1394 Score = 1279 bits (3310), Expect = 0.0 Identities = 642/932 (68%), Positives = 745/932 (79%), Gaps = 15/932 (1%) Frame = -1 Query: 2753 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 2574 +TKQPYIEDVGPR+I+SIQFST+SG+DI K SE QV+ G+YYD +K + GGLLD MG Sbjct: 10 YTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGLLDTRMGA 69 Query: 2573 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 2394 PNK G C+TC +FT+CPGH G+L L LPV+NVGY+ TI+ I+KCICK CSR+L+ EK R Sbjct: 70 PNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRVLVDEKLR 129 Query: 2393 QDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKR--QQLKI 2220 + +L+RMR+P+ E LKKN+++K IV KC+SM + KAV+C RCGY+NGMVK+ + I Sbjct: 130 KSYLKRMRNPRTEPLKKNELMKEIVKKCSSMA--SSKAVKCLRCGYMNGMVKKAGSVVGI 187 Query: 2219 IHERRNIADNGLDEFRSALSHTQ---ANVSLPSTI-DAKMVYELLKNMRDEDCELLYLND 2052 IH+R + D L+E +SA+ HT+ A + L + I + V L + M +EDCELLYL Sbjct: 188 IHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCELLYLQG 247 Query: 2051 RPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ-- 1878 RPEKL++T+I VPP +IRPSVF +G QSNENDITERLK IIQ NA LR E+ E Sbjct: 248 RPEKLIITTIAVPPISIRPSVFTEGS-QSNENDITERLKQIIQFNAKLRLELLEGRRTGI 306 Query: 1877 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 1698 ++L W+ L+ V YINS+ R RPLSGF+QRL GKQGRFR NL+GKRVEF Sbjct: 307 KYLIGWDELQAVVTLYINSDVR--IPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGKRVEF 364 Query: 1697 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 1518 TGRTVISPDPNLKITEVA+PI MARILTYPERV+HHNIEKLRQ V NG KYPGA+ + Sbjct: 365 TGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVTY 424 Query: 1517 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 1338 PDG L RK A++L+ GCIVHRHLEDGDVVLFNRQPSLHRMSIM HRARIMPWR Sbjct: 425 PDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 484 Query: 1337 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 1158 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA +LMGVQNNLCTPKNGEILVASTQD Sbjct: 485 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEILVASTQD 544 Query: 1157 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 978 FLTSSFLITRKDTFYDR+AFSLMCSY+ D MD +DLPTP+++KP+ELWTGKQLFSVLLRP Sbjct: 545 FLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQLFSVLLRP 604 Query: 977 HAKMRVYLNLTVAEKSY-------MKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNK 819 HA +RVY+NL + EK+Y K +ETMCP DG+VY RNSELISGQLGKATLGNGNK Sbjct: 605 HANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELISGQLGKATLGNGNK 664 Query: 818 DGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDME 639 DG+YS+LLRDY +AAATCMNRLAKLSARWIGNHGFSIGI+DVQPG L EK TI Sbjct: 665 DGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEKGKTISNG 724 Query: 638 YGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIM 459 Y HC I Y G L L GCD+ +TLE++I+E LN +RE +VCMK L+WRNSPLIM Sbjct: 725 YRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKELHWRNSPLIM 784 Query: 458 SQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYT 279 SQCGSKGSPINI QMIACVGQQSVGG RAP+GFIDR+LPHF + +K P AKGFV NSFY+ Sbjct: 785 SQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYS 844 Query: 278 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQF 99 GLSATEFFFHTMGGREGLVDTAVKTADTGYM+RRL K LEDL + YDNTV++A IVQF Sbjct: 845 GLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDAGGGIVQF 904 Query: 98 VYGGDAMDPAQMEEKTGLPLNFERLFMKAKAT 3 +YG D +DPA ME K G+PLNF+RLFMK KAT Sbjct: 905 LYGDDGLDPAIMEGKAGVPLNFDRLFMKVKAT 936 >ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina] gi|557526635|gb|ESR37941.1| hypothetical protein CICLE_v10027681mg [Citrus clementina] Length = 1397 Score = 1260 bits (3260), Expect = 0.0 Identities = 645/963 (66%), Positives = 749/963 (77%), Gaps = 33/963 (3%) Frame = -1 Query: 2792 MQKEMRRDQGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRK 2613 M +++++ ++ FTKQPYIEDVGPRKIESIQFS +S ++I K +EVQVY+G+YY R Sbjct: 1 MTQQLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRV 60 Query: 2612 PVGGGLLDPHM---------------GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFN 2478 P+ GGLLDP M GP NKS C TC F+NCPGH G+LTLALPV+N Sbjct: 61 PIEGGLLDPRMEKIIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYN 120 Query: 2477 VGYIGTIVVIMKCICKKCSRILLKEKDRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMV 2298 VGY+ TI+ I+KCICK CSR+LL+EK +D+L++MR+PK+E L+K D++K+IV KC++M Sbjct: 121 VGYLSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMA 180 Query: 2297 GGNQKAVECSRCGYVNGMVKRQQ--LKIIHERRNIADNGLDEFRSALSHTQANVSLPST- 2127 KAV+C RCGY+NGMVK+ L IIH+R + ++ L EF SA++HT+ + + + Sbjct: 181 S---KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTES-LQEFASAITHTKESKAAVNVA 236 Query: 2126 ---IDAKMVYELLKNMRDEDCELLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNEN 1956 ++ V L K M D DCE+LYL++RPEKL++T+I VPP AIRPSV +DG QSNEN Sbjct: 237 TYILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGS-QSNEN 295 Query: 1955 DITERLKFIIQANACLRSEMAETESQ-RFLSNWELLRDEVAQYINSEARGLSNNSQSNSR 1779 DITERLK IIQ NA L+ E+ E S + L+ WE L+ EVAQYINS+ RG+ + Q +R Sbjct: 296 DITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV-AR 354 Query: 1778 PLSGFIQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPILMARILTYPERV 1599 PLSGF+QRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+PI MARILTYPERV Sbjct: 355 PLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERV 414 Query: 1598 SHHNIEKLRQYVRNGPQKYPGAKFIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDG 1419 S HNIEKLRQ ++NGP KYPGA+ I+ PDG L + R A +L+ GCIV RHLEDG Sbjct: 415 SDHNIEKLRQCIQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDG 474 Query: 1418 DVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEART 1239 DVVLFNRQPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEART Sbjct: 475 DVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEART 534 Query: 1238 EALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDS 1059 EAL+LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR+AFSLMC Y+GD MD Sbjct: 535 EALLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDR 594 Query: 1058 IDLPTPALVKPVELWTGKQLFSVLLRPHAKMRVYLNLTVAEKSYMKSK-----------E 912 +DLPTPA++KPVELWTGKQLFSVL+RPHA MRVY+NLTV EK+Y E Sbjct: 595 VDLPTPAILKPVELWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIE 654 Query: 911 TMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVLLRDYGPHAAATCMNRLAKLSAR 732 TMCP DGFVY RNSELISGQLGKATLG CMNRLAKLSAR Sbjct: 655 TMCPNDGFVYFRNSELISGQLGKATLG----------------------CMNRLAKLSAR 692 Query: 731 WIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDYIRRYTSGSLELSPGCDSAETLE 552 WIGNHGFSIGI+DVQP L+ +K I Y C I+ Y G L+L PGCD+A+TLE Sbjct: 693 WIGNHGFSIGIDDVQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLE 752 Query: 551 SKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRA 372 + I++ LN IRE CM +L WRNSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRA Sbjct: 753 AVITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRA 812 Query: 371 PNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTG 192 PNGFIDR+LPHF + AK+P AKGFV NSFY+GLSATEFFFHTMGGREGLVDTAVKTADTG Sbjct: 813 PNGFIDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTG 872 Query: 191 YMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKA 12 YMSRRLIKALEDLSI YDN+VRNA CIVQF+YG D MDPA ME K+G PLNF+RL MK Sbjct: 873 YMSRRLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKV 932 Query: 11 KAT 3 KAT Sbjct: 933 KAT 935 >ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata] Length = 1376 Score = 1258 bits (3254), Expect = 0.0 Identities = 624/932 (66%), Positives = 737/932 (79%), Gaps = 13/932 (1%) Frame = -1 Query: 2759 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 2580 ++FTKQPYIEDVGP KI+SI FS LS ++ K +EVQV++ YY+ KP GLLD M Sbjct: 7 IEFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGLLDARM 66 Query: 2579 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 2400 GPPNK C TC NF NCPGH G+L L LPV+NVG+ I+ I+KCICK+CS +LL EK Sbjct: 67 GPPNKKSICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKRCSNMLLDEK 126 Query: 2399 DRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKR----Q 2232 +D LR+MR+PK+E LKK ++ KA+V KC++M +Q+ + C +CGY+NGMVK+ Sbjct: 127 LYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMA--SQRIITCKKCGYLNGMVKKIAAQM 184 Query: 2231 QLKIIHERRNIADNGLDEFRSALSHTQANVS----LPSTIDAKMVYELLKNMRDEDCELL 2064 + I H+R I +DE +SA+SHT+ + L +D +V L K M D+DCELL Sbjct: 185 GIGISHDRSKIHGGEVDECKSAISHTKESTRAINPLTYVLDPNLVLGLFKGMSDKDCELL 244 Query: 2063 YLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE-T 1887 Y+ RPE L+ T +LVPP +IRPSV + GG +SNENDITERLK IIQ NACL +++ T Sbjct: 245 YIAHRPENLITTCMLVPPLSIRPSVMI-GGTRSNENDITERLKLIIQNNACLHRILSQPT 303 Query: 1886 ESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKR 1707 S + + W+ ++ EVA+YINSE RG+ N Q PLSG +QRLKGKQGRFR NLSGKR Sbjct: 304 TSPKNMQVWDTVQSEVAKYINSEVRGVQN--QPEKTPLSGLLQRLKGKQGRFRANLSGKR 361 Query: 1706 VEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKF 1527 VE+TGRTVISPDPNLKITEV +PILMARILT+PE VS HNIEKLRQ VRNGP KYPGA+ Sbjct: 362 VEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARN 421 Query: 1526 IKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIM 1347 ++ PDG +LV + RK AD+L GCIV RHLE+GD VLFNRQPSLHRMSIM HRARIM Sbjct: 422 VRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIM 481 Query: 1346 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1167 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVAS Sbjct: 482 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVAS 541 Query: 1166 TQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVL 987 TQDFLT+SFLITRKDTFYDR+AFSL+CSY+GD MD+IDLPTP ++KP+ELWTGKQLFSVL Sbjct: 542 TQDFLTTSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTILKPIELWTGKQLFSVL 601 Query: 986 LRPHAKMRVYLNLTVAEKSYMKSK----ETMCPKDGFVYIRNSELISGQLGKATLGNGNK 819 LRP+A +RVY+ L V EK++ K + ETMC DG+VY RNSELISGQLGKATLGNGNK Sbjct: 602 LRPNASVRVYVTLNVKEKNFKKGEHGFDETMCVNDGWVYFRNSELISGQLGKATLGNGNK 661 Query: 818 DGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDME 639 DG+YS+LLRDY HAAA CMNRLAKLSARWIG HGFSIGI+DVQPG+ LNKE+K +I Sbjct: 662 DGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELNKERKDSIQFG 721 Query: 638 YGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIM 459 Y C I + G+L+L G D A++LE++I+ LN IREAT CM L+WRNSPLIM Sbjct: 722 YDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIM 781 Query: 458 SQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYT 279 SQCGSKGSPINI QM+ACVGQQ+V G RAP+GFIDR+LPHF + +K P AKGFV NSFY+ Sbjct: 782 SQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYS 841 Query: 278 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQF 99 GL+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRL+KALEDL + YDNTVRNAS CI+QF Sbjct: 842 GLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQF 901 Query: 98 VYGGDAMDPAQMEEKTGLPLNFERLFMKAKAT 3 YG D MDPA ME K G PLNF+RLF+K +AT Sbjct: 902 TYGDDGMDPALMEGKDGAPLNFDRLFLKIQAT 933 >ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum] gi|557101978|gb|ESQ42341.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum] Length = 1375 Score = 1253 bits (3241), Expect = 0.0 Identities = 624/931 (67%), Positives = 740/931 (79%), Gaps = 12/931 (1%) Frame = -1 Query: 2759 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 2580 ++FTKQPYIEDVGP KI+SI FS S +I K +EVQV++ YY+ KPV GGLLDP M Sbjct: 7 IEFTKQPYIEDVGPLKIKSINFSIFSDLEIMKAAEVQVWRNNYYESNFKPVEGGLLDPRM 66 Query: 2579 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 2400 GPPNK C TC A+F NCPGH G+L L LPV+NVG++ I+ I+KCICK+CS IL+ EK Sbjct: 67 GPPNKKSICATCHADFQNCPGHFGYLKLDLPVYNVGFLNYILDILKCICKRCSNILIDEK 126 Query: 2399 DRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKR--QQL 2226 +D L++MR+PK+E LKK ++ KA+V KC+ M +Q+ + C CGY+NGMVK+ Q+ Sbjct: 127 LYEDHLKKMRNPKMEPLKKTELAKAVVKKCSMMA--SQRIITCKNCGYLNGMVKKVAAQM 184 Query: 2225 KII---HERRNIADNGLDEFRSALSHTQANVS----LPSTIDAKMVYELLKNMRDEDCEL 2067 II H+R I +DEF+SA+SHT+ + L +D +V L K M D+DCEL Sbjct: 185 GIIGISHDRSKIHGGEVDEFKSAISHTRESTGAINPLTYVLDPNLVLGLFKGMSDKDCEL 244 Query: 2066 LYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANA-CLRSEMAE 1890 LY+ RPE L + + VPP RPSV + GG QSNEND+TER+K I+Q NA C + Sbjct: 245 LYIAHRPENLFIICMFVPPLPTRPSVRI-GGTQSNENDLTERVKKILQDNASCKKILNQA 303 Query: 1889 TESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGK 1710 T S + + W+ ++ EVAQYINSE RG+ N Q +S+PLSG +QRLKGKQGRFR NLSGK Sbjct: 304 TTSPKNMQVWDTVQSEVAQYINSEVRGIPN--QPDSKPLSGILQRLKGKQGRFRANLSGK 361 Query: 1709 RVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAK 1530 RVE+TGRTVISPDPNLKITEV +PILMARILT+PE VS HNIEKLRQ VRNGP KYPGA+ Sbjct: 362 RVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGAR 421 Query: 1529 FIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARI 1350 ++ PDG +LV + RK AD+L GCIV RHLE+GD VLFNRQPSLHRMSIM HRARI Sbjct: 422 SVRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARI 481 Query: 1349 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1170 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVA Sbjct: 482 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVA 541 Query: 1169 STQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSV 990 STQDFLTSS+LITRKDTFYDR+AFSL+CSY+GDAMD+IDLPTP ++KP+ELWTGKQ+FSV Sbjct: 542 STQDFLTSSYLITRKDTFYDRAAFSLICSYMGDAMDAIDLPTPTILKPIELWTGKQVFSV 601 Query: 989 LLRPHAKMRVYLNLTVAEKSYMKSK--ETMCPKDGFVYIRNSELISGQLGKATLGNGNKD 816 LLRP+A +RVY+ L V EK++ K K ETMC DG+VY RNSELISGQLGKATLGNGNKD Sbjct: 602 LLRPNASVRVYVTLNVKEKNFKKGKYDETMCTNDGWVYFRNSELISGQLGKATLGNGNKD 661 Query: 815 GIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEY 636 G+YSVLLRDY HAAA CMNRLAKLSARWIG HGFS+GI+DVQPG+ L +E++ I+ Y Sbjct: 662 GLYSVLLRDYNSHAAAVCMNRLAKLSARWIGIHGFSLGIDDVQPGEELREEREKIINKGY 721 Query: 635 GHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMS 456 C IR + G L+L G D+A++LES I+ LN IREAT +CM+ L+WRNSPLIMS Sbjct: 722 EDCGLKIRDFNEGRLQLKAGLDTAKSLESDITGILNRIREATGKLCMEGLHWRNSPLIMS 781 Query: 455 QCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTG 276 QCGSKGSPINI QM+ACVGQQ+V G RAP+GFIDR+LPHF + +K P+AKGFV NSFY+G Sbjct: 782 QCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKTPEAKGFVANSFYSG 841 Query: 275 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFV 96 L+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRL+KALEDL + YDNTVRNAS CI+QF Sbjct: 842 LTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFT 901 Query: 95 YGGDAMDPAQMEEKTGLPLNFERLFMKAKAT 3 YG D MDP ME K G PLNF+RLF+K +AT Sbjct: 902 YGDDGMDPVLMEGKDGAPLNFDRLFLKIQAT 932 >ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella] gi|482548169|gb|EOA12363.1| hypothetical protein CARUB_v10025743mg [Capsella rubella] Length = 1376 Score = 1249 bits (3231), Expect = 0.0 Identities = 621/932 (66%), Positives = 735/932 (78%), Gaps = 13/932 (1%) Frame = -1 Query: 2759 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 2580 +++TK+PYIEDVG KI+SI FS LS ++ K +EVQV++ YYD KP GGLLDP M Sbjct: 7 IEYTKKPYIEDVGSLKIKSINFSMLSDLEVMKAAEVQVWKNSYYDPNCKPFEGGLLDPRM 66 Query: 2579 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 2400 GPPNK C TC NF NCPGH G+L L LPV+N+GY I+ I+KCICK CS +LL EK Sbjct: 67 GPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNIGYFNFILDILKCICKCCSNMLLDEK 126 Query: 2399 DRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKR----Q 2232 +D LR+MR+PK+E LKK ++ KA+V KC++M +Q+ + C +CGY+NGMVK+ Sbjct: 127 LYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMA--SQRIITCKKCGYLNGMVKKIPAQM 184 Query: 2231 QLKIIHERRNIADNGLDEFRSALSH----TQANVSLPSTIDAKMVYELLKNMRDEDCELL 2064 + I H+R I +DEF++A+SH TQA L +D +V L K M D+DCELL Sbjct: 185 GIGISHDRSKIHGGEVDEFKAAISHIKESTQAINPLTYVLDPNVVLGLFKGMSDKDCELL 244 Query: 2063 YLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE-T 1887 Y+ RPE L++T +LVPP +IRPSV V GG QSNEND++ RLK IIQ NA L +++ T Sbjct: 245 YIAHRPENLIITCMLVPPLSIRPSVMV-GGSQSNENDLSARLKQIIQDNASLHRILSQPT 303 Query: 1886 ESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKR 1707 S + + W+ ++ EVA+YINSE RG+ N Q +S+P+SG +QRLKGKQGRFR NLSGKR Sbjct: 304 TSAKNMQVWDTVQSEVAKYINSEVRGVQN--QPDSKPMSGILQRLKGKQGRFRANLSGKR 361 Query: 1706 VEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKF 1527 VE+TGRTVISPDPNLKITEV +PILMARILT+PE VS HNIEKLRQ VRNGP KYPGA+ Sbjct: 362 VEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGARN 421 Query: 1526 IKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIM 1347 ++ PDG +LV + RK AD+L GCIV RHLE+GD VLFNRQPSLHRMSIM HRARIM Sbjct: 422 VRYPDGSSRALVGDYRKRIADELAIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARIM 481 Query: 1346 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1167 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVAS Sbjct: 482 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVAS 541 Query: 1166 TQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVL 987 TQDFLTSSFLITRKDTFYDR+AFSL+CSY+GD MD+IDLPTP ++KP+ELWTGKQ+FSVL Sbjct: 542 TQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTVLKPIELWTGKQIFSVL 601 Query: 986 LRPHAKMRVYLNLTVAEKSYMKSK----ETMCPKDGFVYIRNSELISGQLGKATLGNGNK 819 LRP+A +RVY+ L V EK++ K ETMC DG+VY RNSELISGQLGKATLGNGNK Sbjct: 602 LRPNASVRVYVTLNVKEKNFKKGNHGFDETMCTNDGWVYFRNSELISGQLGKATLGNGNK 661 Query: 818 DGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDME 639 DG+YS+LLRDY HAAA CMNRLAKLSARWIG HGFSIGI+DVQPG+ L++++K I Sbjct: 662 DGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSRQRKDAIQSG 721 Query: 638 YGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIM 459 Y C I + G+L+L G D A+TLE+ I+ LN IRE T CM L+WRNSPLIM Sbjct: 722 YDDCHSIIENFNRGNLQLKAGLDGAKTLEAGITGILNTIREDTGKACMDGLHWRNSPLIM 781 Query: 458 SQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYT 279 SQCGSKGSPINI QM+ACVGQQ+V G RAP+GFIDR+LPHF + +K P AKGFV NSFY+ Sbjct: 782 SQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYS 841 Query: 278 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQF 99 GL+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRL+KALEDL + YDNTVRNAS CI+QF Sbjct: 842 GLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQF 901 Query: 98 VYGGDAMDPAQMEEKTGLPLNFERLFMKAKAT 3 YG D MDPA ME K G PLNF RLF+K +AT Sbjct: 902 TYGDDGMDPALMEGKDGAPLNFNRLFLKIQAT 933 >ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine max] Length = 1391 Score = 1248 bits (3229), Expect = 0.0 Identities = 629/932 (67%), Positives = 740/932 (79%), Gaps = 16/932 (1%) Frame = -1 Query: 2753 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 2574 FTK+P++ED GPRKI++++FSTLS ++I K++EVQV++G YYD +KP+ GGLLDP MGP Sbjct: 11 FTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYDSFKKPIHGGLLDPRMGP 70 Query: 2573 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 2394 NKS C TC NF +CPGH G+L LALPVFNVGY+ TIV I+KCICK C+RILL E R Sbjct: 71 ANKSLVCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGCARILLDEDTR 130 Query: 2393 QDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKR--QQLKI 2220 + L++MRS K L K D +K V K S K V C RCGY+NG VK+ L I Sbjct: 131 KKHLKKMRSSKKSELDKIDFVKVRVIKDCS------KVVNCPRCGYINGSVKKLPASLTI 184 Query: 2219 IHERRNIADNGLDEFRSALSH---TQANVSLPSTI-DAKMVYELLKNMRDEDCELLYLND 2052 IH+ + ++E SALS ++A ++ + I + V L K M DEDCELLY+ + Sbjct: 185 IHDCSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLSLFKRMLDEDCELLYVAE 244 Query: 2051 RPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE-TESQR 1875 RPEKL++T+++VPP AIRPSV +D SNENDITERLK IIQANA LR E+ E T S + Sbjct: 245 RPEKLIMTNVVVPPIAIRPSVVMDES-LSNENDITERLKNIIQANAVLRQELQESTFSSK 303 Query: 1874 FLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFT 1695 FL W++L++EVAQ+INS+ RG+ Q ++ L+GF+QRLKGK GRFRGNLSGKRVE+T Sbjct: 304 FLDGWDILQNEVAQFINSDVRGIPFYMQP-TKQLAGFVQRLKGKHGRFRGNLSGKRVEYT 362 Query: 1694 GRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTP 1515 GRTVISPDPNLKI+EVA+PI MARILTYPERV+HHNIEKLRQ VRNGP KYPGA+ ++ Sbjct: 363 GRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRRD 422 Query: 1514 DGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRT 1335 GH SL RK AD+LR G IV RHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRT Sbjct: 423 GGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRT 482 Query: 1334 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 1155 LRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGV+NNLCTPKNGEILVASTQDF Sbjct: 483 LRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNGEILVASTQDF 542 Query: 1154 LTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPH 975 LTSSFLITRKDTFYDRS FSL+CSY+GD MD IDLPTPA+VKPVELW+GKQLFS++LRPH Sbjct: 543 LTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGKQLFSIILRPH 602 Query: 974 AKMRVYLNLTVAEKSYMKSK---------ETMCPKDGFVYIRNSELISGQLGKATLGNGN 822 A MRVY+NLTV E++Y + K +T+CP DGFVY RNSELISGQ+GK TLGNGN Sbjct: 603 ANMRVYVNLTVKERNYTEDKKIKDKKIEWKTLCPNDGFVYFRNSELISGQVGKVTLGNGN 662 Query: 821 KDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDM 642 KDG++SVLLRDY HAAA+CMNRLAKLSARWIGNHGFSIGI+DVQP + L +K TI Sbjct: 663 KDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILINKKDETISE 722 Query: 641 EYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLI 462 Y C +I + G LEL GCD+A+TLE++I+ LN +R+ VCM+ L+WRNSPLI Sbjct: 723 GYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQTLHWRNSPLI 782 Query: 461 MSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFY 282 MSQCGSKGS INI QM+ACVGQQSVGGRR PNGFIDR+LPHF + +K P AKGFV NSFY Sbjct: 783 MSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPAAKGFVANSFY 842 Query: 281 TGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQ 102 +GLSATEFFFHTMGGREGLVDTAVKTADTGYMSR+L+K+LEDL + YD TVRNA IVQ Sbjct: 843 SGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYTVRNAGGSIVQ 902 Query: 101 FVYGGDAMDPAQMEEKTGLPLNFERLFMKAKA 6 F YG D MDPA ME K G PLNFERLF+K+KA Sbjct: 903 FCYGDDGMDPAGMEGKNGKPLNFERLFLKSKA 934 >ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris] gi|561005141|gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris] Length = 1392 Score = 1248 bits (3228), Expect = 0.0 Identities = 626/930 (67%), Positives = 740/930 (79%), Gaps = 14/930 (1%) Frame = -1 Query: 2753 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 2574 FTK+P++ED GPRKI++++FS LS ++I KL EVQV++G YYD +KP+ GGLLDP MGP Sbjct: 11 FTKEPFMEDAGPRKIKNMKFSMLSDSEISKLGEVQVWKGSYYDSFKKPIHGGLLDPRMGP 70 Query: 2573 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 2394 NKS C TC NF +CPGH G+L LALPVFNVGY+G+IV I+KCICK C+RILL E R Sbjct: 71 ANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVEILKCICKGCARILLDEDTR 130 Query: 2393 QDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKR--QQLKI 2220 + L++MRS K L K D +K + K S K V C RCGY+NG VK+ L I Sbjct: 131 KKHLKKMRSSKKSELDKMDFVKVRIIKDCS------KVVNCPRCGYINGSVKKLPASLII 184 Query: 2219 IHERRNIADNGLDEFRSALSHTQ-----ANVSLPSTIDAKMVYELLKNMRDEDCELLYLN 2055 +H+ +N ++E S LS + ANVS ++ V L + M DEDCELLY+ Sbjct: 185 MHDCSKCKNNIVEELESTLSRIKDSKATANVS-NRILNPFQVLSLFRKMLDEDCELLYVA 243 Query: 2054 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETE-SQ 1878 +RPEKL++T+I+VPP AIRPSV +D SNENDITERLK IIQANA LR E+ E+ S Sbjct: 244 ERPEKLIITNIVVPPIAIRPSVVMDES-LSNENDITERLKNIIQANAVLRQELQESSVSS 302 Query: 1877 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 1698 +FL WE+L++EVAQ+INSE RG+ QS ++ L+GF+QRLKGK GRFRGNLSGKRVE+ Sbjct: 303 KFLDGWEILQNEVAQFINSEVRGIPFYMQS-TKQLAGFVQRLKGKHGRFRGNLSGKRVEY 361 Query: 1697 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 1518 TGRTVISPDPNLKI+EVA+PILMA ILTYPERV+HHNIEKLRQ VRNGP KYPGA+ ++ Sbjct: 362 TGRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRR 421 Query: 1517 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 1338 GH SL RK AD+LR G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWR Sbjct: 422 DGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 481 Query: 1337 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 1158 TLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQD Sbjct: 482 TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQD 541 Query: 1157 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 978 FLTSSFL+TRKDTFYDRSAF+ +C+++GD +D IDLPTPA+VKPVELW+GKQLFS+LLRP Sbjct: 542 FLTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKPVELWSGKQLFSLLLRP 601 Query: 977 HAKMRVYLNLTVAEKSYMK------SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKD 816 HA +VY+NLTV EK+Y K +T+CP DGFVY RN+ELISGQ+GK TLGNGNKD Sbjct: 602 HANFKVYVNLTVKEKTYTKLDDKKRELKTLCPNDGFVYFRNTELISGQIGKVTLGNGNKD 661 Query: 815 GIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEY 636 G++SVLLRDY HAAA+CMNRLAKLSARWIGNHGFSIGI+DVQP + L K+K T+ Y Sbjct: 662 GLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILIKKKDETLSEGY 721 Query: 635 GHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMS 456 C ++I+ + G LEL GCD+ +TLE++I+ LN +R+ VCM+ L+WRNSPLIMS Sbjct: 722 KKCDNHIQAFNKGKLELLAGCDAPQTLETQITGVLNGLRDMAGKVCMQTLHWRNSPLIMS 781 Query: 455 QCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTG 276 QCGSKGSPINI QM+ACVGQQSVGGRRAPNGF+DR+LPHF AK P AKGFV NSFY+G Sbjct: 782 QCGSKGSPINISQMVACVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKGFVANSFYSG 841 Query: 275 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFV 96 LSATEFFFHTMGGREGLVDTAVKTADTGYMSR+L+K++EDL + YD TVRNA IVQF Sbjct: 842 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRNAGGSIVQFC 901 Query: 95 YGGDAMDPAQMEEKTGLPLNFERLFMKAKA 6 YG D MDP ME K G PLNFERLF+K+KA Sbjct: 902 YGDDGMDPGGMEGKNGKPLNFERLFLKSKA 931 >ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus communis] Length = 1383 Score = 1243 bits (3216), Expect = 0.0 Identities = 637/914 (69%), Positives = 732/914 (80%), Gaps = 19/914 (2%) Frame = -1 Query: 2687 LSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGPPNK-SGKCETCAANFTNCPGHC 2511 +SG +I K +E QV+ G YYD RKP+ GLLDP +GP K S CETC A+F CPGH Sbjct: 2 MSGAEILKAAECQVHLGSYYDSTRKPIQAGLLDPRLGPATKQSSACETCGADFHECPGHF 61 Query: 2510 GHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDRQDFLRRMRSPKLEHLKKNDIL 2331 G+L L LPVFNVGY+ I+ I+KCICK CSRIL EK + L++MR+P++EHL+K++++ Sbjct: 62 GYLNLVLPVFNVGYMSNILDILKCICKSCSRILYDEKLCKADLKKMRNPRIEHLRKSELV 121 Query: 2330 KAIVTKCNSMVGGNQKAVECSRCGYVNGMVKR--QQLKIIHERRNIADNGLDEFRSALSH 2157 K IV KC+SM + KAV+C+RCG +NGMVK+ L IIH+R + D L+E RSA++H Sbjct: 122 KKIVKKCSSMT--SNKAVKCTRCGDMNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAH 179 Query: 2156 TQ---ANVSLPSTIDAKM-VYELLKNMRDEDCELLYLNDRPEKLMVTSILVPPTAIRPSV 1989 T+ A +SL + I + V L K + +EDCE+L L DRPEKL++T+I VPP +IRPSV Sbjct: 180 TKESRAPISLATYILTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSV 239 Query: 1988 FVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ--RFLSNWELLRDEVAQYINSEA 1815 F DG QSNENDITERLK IIQANA LR E+ E ++L +W+ L+ VA Y+NS+ Sbjct: 240 FTDGL-QSNENDITERLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDV 298 Query: 1814 RGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPI 1635 R + NN + +PLSGF+QRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVA+PI Sbjct: 299 R-VPNNVEVG-KPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPI 356 Query: 1634 LMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPDGHEISLVYEARKHHADQLR 1455 MARIL+YPERVSHHNIEKLRQ V NGPQKYPGA ++ PDG L+ RK A++L Sbjct: 357 HMARILSYPERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELT 416 Query: 1454 YGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEM 1275 +GCIV RHLEDGDVVLFNRQPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEM Sbjct: 417 FGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEM 476 Query: 1274 NMHVPQTEEARTEALMLMGV-QNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSAF 1098 NMHVPQTEEARTEAL+LMGV QNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDR+AF Sbjct: 477 NMHVPQTEEARTEALLLMGVSQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAF 536 Query: 1097 SLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHAKMRVYLNLTVAEKSYMK- 921 SLMCSY+ D MD IDLPTPA++KP+ELWTGKQLFSVLLRP+A +RVY+NL V EK Y K Sbjct: 537 SLMCSYMNDGMDLIDLPTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKP 596 Query: 920 ------SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVLLRDYGPHAAATCM 759 KETMCP DGFVYIRNSELISGQLGKATLGNGNKDG+YS+LLRDY PHAAATCM Sbjct: 597 KKGDKREKETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCM 656 Query: 758 NRLAKLS--ARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDYIRRYTSGSLEL 585 NRLAKL ARWIGNHGFSIGI+DVQPG L K TI Y C I +Y G L L Sbjct: 657 NRLAKLRQVARWIGNHGFSIGIDDVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLL 716 Query: 584 SPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKGSPINICQMIAC 405 PGCD+ +TLES+I+E LN +RE +VCMK L+WRNSPLIMSQCGSKGS INI QM+AC Sbjct: 717 KPGCDATQTLESEITEKLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVAC 776 Query: 404 VGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEFFFHTMGGREGL 225 VGQQSVGGRRAP+GFIDR+LPHF + +K P AKGFV NSFY+GL ATEFFFHTM GREGL Sbjct: 777 VGQQSVGGRRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGL 836 Query: 224 VDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAMDPAQMEEKTGL 45 VDTAVKTADTGYMSRRLIK LEDLSI YDNTVRNAS CIVQF+YG D +DPA ME K G+ Sbjct: 837 VDTAVKTADTGYMSRRLIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGV 896 Query: 44 PLNFERLFMKAKAT 3 PLN +RLF K KAT Sbjct: 897 PLNLDRLFSKVKAT 910 >dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana] Length = 1383 Score = 1242 bits (3214), Expect = 0.0 Identities = 620/932 (66%), Positives = 733/932 (78%), Gaps = 13/932 (1%) Frame = -1 Query: 2759 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 2580 ++FTK+PYIEDVGP KI+SI FS LS ++ K +EVQV+ YD KP GLLDP M Sbjct: 7 IEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPRM 66 Query: 2579 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 2400 GPPNK C TC NF NCPGH G+L L LPV+NVGY I+ I+KCICK+CS +LL EK Sbjct: 67 GPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNMLLDEK 126 Query: 2399 DRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKRQQLK- 2223 +D LR+MR+P++E LKK ++ KA+V KC++M +Q+ + C +CGY+NGMVK+ + Sbjct: 127 LYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMA--SQRIITCKKCGYLNGMVKKIAAQF 184 Query: 2222 ---IIHERRNIADNGLDEFRSALSHTQANVS----LPSTIDAKMVYELLKNMRDEDCELL 2064 I H+R I +DE +SA+SHT+ + + L +D +V L K M D+DCELL Sbjct: 185 GIGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSDKDCELL 244 Query: 2063 YLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE-T 1887 Y+ RPE L++T +LVPP +IRPSV + GG QSNEND+T RLK II NA L +++ T Sbjct: 245 YIAYRPENLIITCMLVPPLSIRPSVMI-GGIQSNENDLTARLKQIILGNASLHKILSQPT 303 Query: 1886 ESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKR 1707 S + + W+ ++ EVA+YINSE RG N Q PLSG +QRLKGK GRFR NLSGKR Sbjct: 304 SSPKNMQVWDTVQIEVARYINSEVRGCQN--QPEEHPLSGILQRLKGKGGRFRANLSGKR 361 Query: 1706 VEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKF 1527 VEFTGRTVISPDPNLKITEV +PILMA+ILT+PE VS HNIEKLRQ VRNGP KYPGA+ Sbjct: 362 VEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARN 421 Query: 1526 IKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIM 1347 ++ PDG +LV + RK AD+L GCIV RHL++GDVVLFNRQPSLHRMSIM HRARIM Sbjct: 422 VRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIM 481 Query: 1346 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1167 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVAS Sbjct: 482 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVAS 541 Query: 1166 TQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVL 987 TQDFLTSSFLITRKDTFYDR+AFSL+CSY+GD MDSIDLPTP ++KP+ELWTGKQ+FSVL Sbjct: 542 TQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIELWTGKQIFSVL 601 Query: 986 LRPHAKMRVYLNLTVAEKSYMKSK----ETMCPKDGFVYIRNSELISGQLGKATLGNGNK 819 LRP+A +RVY+ L V EK++ K + ETMC DG+VY RNSELISGQLGKATLGNGNK Sbjct: 602 LRPNASIRVYVTLNVKEKNFKKGEHGFDETMCINDGWVYFRNSELISGQLGKATLGNGNK 661 Query: 818 DGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDME 639 DG+YS+LLRDY HAAA CMNRLAKLSARWIG HGFSIGI+DVQPG+ L+KE+K +I Sbjct: 662 DGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQFG 721 Query: 638 YGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIM 459 Y C I + G+L+L G D A++LE++I+ LN IREAT CM L+WRNSPLIM Sbjct: 722 YDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIM 781 Query: 458 SQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYT 279 SQCGSKGSPINI QM+ACVGQQ+V G RAP+GFIDR+LPHF + +K P AKGFV NSFY+ Sbjct: 782 SQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYS 841 Query: 278 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQF 99 GL+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRL+KALEDL + YDNTVRNAS CI+QF Sbjct: 842 GLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQF 901 Query: 98 VYGGDAMDPAQMEEKTGLPLNFERLFMKAKAT 3 YG D MDPA ME K G PLNF RLF+K +AT Sbjct: 902 TYGDDGMDPALMEGKDGAPLNFNRLFLKVQAT 933 >ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana] gi|332009886|gb|AED97269.1| nuclear RNA polymerase C1 [Arabidopsis thaliana] Length = 1376 Score = 1242 bits (3214), Expect = 0.0 Identities = 620/932 (66%), Positives = 733/932 (78%), Gaps = 13/932 (1%) Frame = -1 Query: 2759 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 2580 ++FTK+PYIEDVGP KI+SI FS LS ++ K +EVQV+ YD KP GLLDP M Sbjct: 7 IEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPRM 66 Query: 2579 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 2400 GPPNK C TC NF NCPGH G+L L LPV+NVGY I+ I+KCICK+CS +LL EK Sbjct: 67 GPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNMLLDEK 126 Query: 2399 DRQDFLRRMRSPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGMVKRQQLK- 2223 +D LR+MR+P++E LKK ++ KA+V KC++M +Q+ + C +CGY+NGMVK+ + Sbjct: 127 LYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMA--SQRIITCKKCGYLNGMVKKIAAQF 184 Query: 2222 ---IIHERRNIADNGLDEFRSALSHTQANVS----LPSTIDAKMVYELLKNMRDEDCELL 2064 I H+R I +DE +SA+SHT+ + + L +D +V L K M D+DCELL Sbjct: 185 GIGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSDKDCELL 244 Query: 2063 YLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE-T 1887 Y+ RPE L++T +LVPP +IRPSV + GG QSNEND+T RLK II NA L +++ T Sbjct: 245 YIAYRPENLIITCMLVPPLSIRPSVMI-GGIQSNENDLTARLKQIILGNASLHKILSQPT 303 Query: 1886 ESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKR 1707 S + + W+ ++ EVA+YINSE RG N Q PLSG +QRLKGK GRFR NLSGKR Sbjct: 304 SSPKNMQVWDTVQIEVARYINSEVRGCQN--QPEEHPLSGILQRLKGKGGRFRANLSGKR 361 Query: 1706 VEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKF 1527 VEFTGRTVISPDPNLKITEV +PILMA+ILT+PE VS HNIEKLRQ VRNGP KYPGA+ Sbjct: 362 VEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARN 421 Query: 1526 IKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIM 1347 ++ PDG +LV + RK AD+L GCIV RHL++GDVVLFNRQPSLHRMSIM HRARIM Sbjct: 422 VRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIM 481 Query: 1346 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1167 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVAS Sbjct: 482 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVAS 541 Query: 1166 TQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVL 987 TQDFLTSSFLITRKDTFYDR+AFSL+CSY+GD MDSIDLPTP ++KP+ELWTGKQ+FSVL Sbjct: 542 TQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIELWTGKQIFSVL 601 Query: 986 LRPHAKMRVYLNLTVAEKSYMKSK----ETMCPKDGFVYIRNSELISGQLGKATLGNGNK 819 LRP+A +RVY+ L V EK++ K + ETMC DG+VY RNSELISGQLGKATLGNGNK Sbjct: 602 LRPNASIRVYVTLNVKEKNFKKGEHGFDETMCINDGWVYFRNSELISGQLGKATLGNGNK 661 Query: 818 DGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDME 639 DG+YS+LLRDY HAAA CMNRLAKLSARWIG HGFSIGI+DVQPG+ L+KE+K +I Sbjct: 662 DGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQFG 721 Query: 638 YGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIM 459 Y C I + G+L+L G D A++LE++I+ LN IREAT CM L+WRNSPLIM Sbjct: 722 YDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIM 781 Query: 458 SQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYT 279 SQCGSKGSPINI QM+ACVGQQ+V G RAP+GFIDR+LPHF + +K P AKGFV NSFY+ Sbjct: 782 SQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYS 841 Query: 278 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQF 99 GL+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRL+KALEDL + YDNTVRNAS CI+QF Sbjct: 842 GLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQF 901 Query: 98 VYGGDAMDPAQMEEKTGLPLNFERLFMKAKAT 3 YG D MDPA ME K G PLNF RLF+K +AT Sbjct: 902 TYGDDGMDPALMEGKDGAPLNFNRLFLKVQAT 933