BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00029824
         (375 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]        77   2e-12
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...    76   5e-12
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]        75   7e-12
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...    75   9e-12
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana...    75   9e-12
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...    71   2e-10
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...    71   2e-10
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...    70   2e-10
gb|AAT39934.2| RNA-directed RNA polymerase-like, identical [Sola...    70   2e-10
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]    70   3e-10
gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solan...    70   3e-10
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...    69   5e-10
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...    69   5e-10
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu...    69   9e-10
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...    68   1e-09
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...    68   1e-09
gb|ABI34312.1| RNA-directed RNA polymerase, putative [Solanum de...    67   3e-09
gb|ABI34379.1| RNA-directed RNA polymerase-like, putative [Solan...    67   3e-09
gb|ABI34338.1| RNA-directed RNA polymerase-like, putative [Solan...    67   3e-09
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...    65   7e-09

>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
          Length = 479

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 44/83 (53%), Positives = 55/83 (66%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MGKTIQV GFP+LLSAE VK FLE        G GT++A++VK  K G R++ARVQF   
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKTFLENHT-----GNGTVYALEVKQSKGGRRSFARVQFASN 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
           + A +   LA++G L Y  SYLK
Sbjct: 56  KSAELIIDLASMG-LYYGPSYLK 77


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
           gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
           [Nicotiana glutinosa]
          Length = 1117

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 44/83 (53%), Positives = 55/83 (66%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MGKTIQV GFP+LLSAE VK FLE        G GT++A++VK  K G RA+A+VQF + 
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKTFLENH-----TGNGTVYALEVKQSKGGRRAFAKVQFANN 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
           + A +   LA+ G L Y  SYLK
Sbjct: 56  KSAEIIIDLASKG-LYYGPSYLK 77


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 44/83 (53%), Positives = 54/83 (65%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MGKTIQV GFP+LLSAE VK FLE        G GT++A++VK  K G RA+A+VQF + 
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKKFLENH-----TGNGTVYALEVKQSKGGRRAFAKVQFANN 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
           + A     LA+ G L Y  SYLK
Sbjct: 56  KSAEFIIDLASKG-LYYGPSYLK 77


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 44/83 (53%), Positives = 54/83 (65%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MG+TIQV GFP+L++AE VK FLE        G GT+ A++VK+ K G RAYARVQFT++
Sbjct: 1   MGRTIQVFGFPYLVAAELVKKFLENYT-----GEGTVIALEVKTAKVGRRAYARVQFTNI 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
             A     LA    L Y TSYLK
Sbjct: 56  RCAETIIDLAK-NRLYYGTSYLK 77


>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
          Length = 1044

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 43/83 (51%), Positives = 55/83 (66%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MGKTIQV GFP+LLSAE VK FLE        G GT++A++VK  K G RA+A+VQF + 
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKTFLENH-----TGNGTVYALEVKQSKGGRRAFAKVQFANN 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
           + A +   LA+ G L Y  SYL+
Sbjct: 56  KSAELIMDLASEG-LYYGPSYLQ 77


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 44/85 (51%), Positives = 55/85 (64%)
 Frame = -2

Query: 260 GKMGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFT 81
           G MGKTIQV GFP LLSAE VK FLE+       G GT+ A++VK  K+G RA+A+VQF 
Sbjct: 25  GYMGKTIQVYGFPDLLSAEVVKSFLEKH-----TGYGTVCALEVKQSKRGSRAFAKVQFV 79

Query: 80  DVEYAAMFKSLANLGILMYSTSYLK 6
           D   A    +LA+   L + +SYLK
Sbjct: 80  DNISADKIINLASKR-LYFGSSYLK 103


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
           gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
           [Solanum lycopersicum]
          Length = 1114

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 44/83 (53%), Positives = 54/83 (65%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MGKTIQV GFP+LLSAE VK FLE+       G GT+ A++VK  K G RA+A+VQF D 
Sbjct: 1   MGKTIQVFGFPYLLSAEVVKSFLEKY-----TGYGTVCALEVKQSKGGSRAFAKVQFADN 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
             A    +LAN   L + +SYLK
Sbjct: 56  ISADKIITLAN-NRLYFGSSYLK 77


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 44/83 (53%), Positives = 55/83 (66%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MGKTIQV GFP+LLSAE VK+FLE+       G GTI A++VK  K G RA+A+VQF D 
Sbjct: 1   MGKTIQVFGFPNLLSAEVVKLFLEKH-----TGYGTICALEVKQSKGGSRAFAKVQFVDN 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
             A    +LA+   L + +SYLK
Sbjct: 56  ISADKIINLASKR-LYFGSSYLK 77


>gb|AAT39934.2| RNA-directed RNA polymerase-like, identical [Solanum demissum]
          Length = 190

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 44/83 (53%), Positives = 55/83 (66%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MGKTIQV GFP+LLSAE VK+FLE+       G GTI A++VK  K G RA+A+VQF D 
Sbjct: 1   MGKTIQVFGFPNLLSAEVVKLFLEKH-----TGYGTICALEVKQSKGGSRAFAKVQFVDN 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
             A    +LA+   L + +SYLK
Sbjct: 56  ISADKIINLASKR-LYFGSSYLK 77


>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 43/86 (50%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           M KT+ VSGFP L++AE V+ FLE          G I A++VK GK+G RAYA+VQFT  
Sbjct: 1   MRKTLHVSGFPKLIAAEEVRKFLEGHT-----CEGAIEALEVKPGKRGSRAYAKVQFTSK 55

Query: 74  EYAAMFKSLANLGILMY---STSYLK 6
           E A     LAN+G+  Y   S SYLK
Sbjct: 56  EDADKIIHLANIGLYYYLGNSRSYLK 81


>gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solanum demissum]
          Length = 1137

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 44/85 (51%), Positives = 54/85 (63%)
 Frame = -2

Query: 260 GKMGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFT 81
           G MGKTIQV GFP LLSAE VK FLE+       G GT+ A++VK  K G RA+A+VQF 
Sbjct: 69  GYMGKTIQVYGFPRLLSAEVVKSFLEKH-----TGYGTVCALEVKQSKGGSRAFAKVQFV 123

Query: 80  DVEYAAMFKSLANLGILMYSTSYLK 6
           D   A    +LA+   L + +SYLK
Sbjct: 124 DNISADKIINLASKR-LYFGSSYLK 147


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 43/83 (51%), Positives = 54/83 (65%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MGKTIQV GFP+LLSAE VK FLE+       G GT+ A++VK  K G RA+A+VQF D 
Sbjct: 1   MGKTIQVYGFPYLLSAEVVKSFLEKH-----TGYGTVCALEVKQSKGGSRAFAKVQFVDN 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
             A    +LA+   L + +SYLK
Sbjct: 56  ISADKIINLASKR-LYFGSSYLK 77


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 43/83 (51%), Positives = 54/83 (65%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MGKTIQV GFP+LLSAE VK FLE+       G GT+ A++VK  K G RA+A+VQF D 
Sbjct: 1   MGKTIQVYGFPYLLSAEVVKSFLEKH-----TGYGTVCALEVKQSKGGSRAFAKVQFVDN 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
             A    +LA+   L + +SYLK
Sbjct: 56  ISADKIINLASKR-LYFGSSYLK 77


>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 935

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 43/83 (51%), Positives = 53/83 (63%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MGKTIQV GFP LLSAE VK FLE+       G GT+ A++VK  K G RA+A+VQF D 
Sbjct: 1   MGKTIQVYGFPRLLSAEVVKSFLEKH-----TGYGTVCALEVKQSKGGSRAFAKVQFVDN 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
             A    +LA+   L + +SYLK
Sbjct: 56  ISADKIINLASKR-LYFGSSYLK 77


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
           tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
           tuberosum]
          Length = 1115

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 43/83 (51%), Positives = 53/83 (63%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MGKTIQV GFP LLSAE VK FLE+       G GT+ A++VK  K G RA+A+VQF D 
Sbjct: 1   MGKTIQVYGFPDLLSAEVVKSFLEKH-----TGYGTVCALEVKQSKGGSRAFAKVQFVDN 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
             A    +LA+   L + +SYLK
Sbjct: 56  ISADKIINLASKR-LYFGSSYLK 77


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 43/83 (51%), Positives = 53/83 (63%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MGKTIQV GFP LLSAE VK FLE+       G GT+ A++VK  K G RA+A+VQF D 
Sbjct: 1   MGKTIQVYGFPDLLSAEVVKSFLEKH-----TGYGTVCALEVKQSKGGSRAFAKVQFVDN 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
             A    +LA+   L + +SYLK
Sbjct: 56  ISADKIINLASKR-LYFGSSYLK 77


>gb|ABI34312.1| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 241

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 43/85 (50%), Positives = 52/85 (61%)
 Frame = -2

Query: 260 GKMGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFT 81
           G MGKTIQV GFP LL AE VK FLE+       G GT+ A+ VK  K G RA+A+VQF 
Sbjct: 64  GYMGKTIQVYGFPDLLPAEVVKSFLEKH-----TGYGTVCALDVKQSKGGSRAFAKVQFV 118

Query: 80  DVEYAAMFKSLANLGILMYSTSYLK 6
           D   A    +LA+   L + +SYLK
Sbjct: 119 DNISADKIINLASKR-LYFGSSYLK 142


>gb|ABI34379.1| RNA-directed RNA polymerase-like, putative [Solanum tuberosum]
          Length = 274

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 43/85 (50%), Positives = 52/85 (61%)
 Frame = -2

Query: 260 GKMGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFT 81
           G MGKTIQV GFP LL AE VK FLE+       G GT+ A+ VK  K G RA+A+VQF 
Sbjct: 84  GYMGKTIQVYGFPDLLPAEVVKSFLEKH-----TGYGTVCALDVKQSKGGSRAFAKVQFV 138

Query: 80  DVEYAAMFKSLANLGILMYSTSYLK 6
           D   A    +LA+   L + +SYLK
Sbjct: 139 DNISADKIINLASKR-LYFGSSYLK 162


>gb|ABI34338.1| RNA-directed RNA polymerase-like, putative [Solanum demissum]
          Length = 215

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 43/85 (50%), Positives = 52/85 (61%)
 Frame = -2

Query: 260 GKMGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFT 81
           G MGKTIQV GFP LL AE VK FLE+       G GT+ A+ VK  K G RA+A+VQF 
Sbjct: 25  GYMGKTIQVYGFPDLLPAEVVKSFLEKH-----TGYGTVCALDVKQSKGGSRAFAKVQFV 79

Query: 80  DVEYAAMFKSLANLGILMYSTSYLK 6
           D   A    +LA+   L + +SYLK
Sbjct: 80  DNISADKIINLASKR-LYFGSSYLK 103


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 42/83 (50%), Positives = 51/83 (61%)
 Frame = -2

Query: 254 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAIQVKSGKQGVRAYARVQFTDV 75
           MGKTIQV GFP LL AE VK FLE+       G GT+ A+ VK  K G RA+A+VQF D 
Sbjct: 1   MGKTIQVYGFPDLLPAEVVKSFLEKH-----TGYGTVCALDVKQSKGGSRAFAKVQFVDN 55

Query: 74  EYAAMFKSLANLGILMYSTSYLK 6
             A    +LA+   L + +SYLK
Sbjct: 56  ISADKIINLASKR-LYFGSSYLK 77