BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00029303
         (730 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU34894.1| hypothetical protein MIMGU_mgv1a005743mg [Mimulus...   333   4e-89
gb|EYU34893.1| hypothetical protein MIMGU_mgv1a005743mg [Mimulus...   333   4e-89
ref|XP_006339932.1| PREDICTED: RNA polymerase II-associated prot...   261   2e-67
ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfam...   260   4e-67
ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated prot...   259   5e-67
emb|CBI39598.3| unnamed protein product [Vitis vinifera]              259   5e-67
ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfam...   259   9e-67
ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily pr...   259   9e-67
ref|XP_004248819.1| PREDICTED: RNA polymerase II-associated prot...   254   2e-65
ref|XP_006339933.1| PREDICTED: RNA polymerase II-associated prot...   254   2e-65
ref|XP_006339935.1| PREDICTED: RNA polymerase II-associated prot...   251   1e-64
ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated prot...   249   7e-64
ref|XP_007031162.1| Tetratricopeptide repeat (TPR)-like superfam...   248   2e-63
ref|XP_007031160.1| Tetratricopeptide repeat-like superfamily pr...   248   2e-63
ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Popu...   245   1e-62
ref|XP_006382392.1| hypothetical protein POPTR_0005s01710g [Popu...   245   1e-62
ref|XP_006375724.1| hypothetical protein POPTR_0013s00980g [Popu...   244   2e-62
ref|XP_006339934.1| PREDICTED: RNA polymerase II-associated prot...   242   1e-61
ref|XP_007205290.1| hypothetical protein PRUPE_ppa006661mg [Prun...   242   1e-61
ref|XP_004144746.1| PREDICTED: RNA polymerase II-associated prot...   236   5e-60

>gb|EYU34894.1| hypothetical protein MIMGU_mgv1a005743mg [Mimulus guttatus]
          Length = 472

 Score =  333 bits (854), Expect = 4e-89
 Identities = 172/244 (70%), Positives = 198/244 (81%), Gaps = 1/244 (0%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKL-DNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTN 178
           DWELSFKEKDKK+R+D +G+ KL D   Q S N+  R  D+ +V  ++T +KT S  N +
Sbjct: 25  DWELSFKEKDKKMRSDAVGKAKLKDQLGQPSGNNVGRPYDSAKVHRKQTMEKTPSYENPS 84

Query: 179 TVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALS 358
           TV+Q+DHLK+YE LS+L+S V S E  VDANSEKELGNEFFKQKKF EAIDCYSRSIALS
Sbjct: 85  TVKQYDHLKEYEALSRLSSAVPSTESFVDANSEKELGNEFFKQKKFTEAIDCYSRSIALS 144

Query: 359 PTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDV 538
           P+AVAYANRAMAYIK++RFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLK+S+DD 
Sbjct: 145 PSAVAYANRAMAYIKIRRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKESMDDA 204

Query: 539 EFALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHKGKVEADKKKYALNSP 718
           EFALRLEPQNQ+IKKQ AE K+LLEK I+KK SGAL G +EGA  GK E DK        
Sbjct: 205 EFALRLEPQNQEIKKQFAESKSLLEKAILKKVSGALTGSVEGAQPGKSEVDKNNNVQKPL 264

Query: 719 AGRV 730
           +GRV
Sbjct: 265 SGRV 268


>gb|EYU34893.1| hypothetical protein MIMGU_mgv1a005743mg [Mimulus guttatus]
          Length = 462

 Score =  333 bits (854), Expect = 4e-89
 Identities = 172/244 (70%), Positives = 198/244 (81%), Gaps = 1/244 (0%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKL-DNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTN 178
           DWELSFKEKDKK+R+D +G+ KL D   Q S N+  R  D+ +V  ++T +KT S  N +
Sbjct: 15  DWELSFKEKDKKMRSDAVGKAKLKDQLGQPSGNNVGRPYDSAKVHRKQTMEKTPSYENPS 74

Query: 179 TVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALS 358
           TV+Q+DHLK+YE LS+L+S V S E  VDANSEKELGNEFFKQKKF EAIDCYSRSIALS
Sbjct: 75  TVKQYDHLKEYEALSRLSSAVPSTESFVDANSEKELGNEFFKQKKFTEAIDCYSRSIALS 134

Query: 359 PTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDV 538
           P+AVAYANRAMAYIK++RFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLK+S+DD 
Sbjct: 135 PSAVAYANRAMAYIKIRRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKESMDDA 194

Query: 539 EFALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHKGKVEADKKKYALNSP 718
           EFALRLEPQNQ+IKKQ AE K+LLEK I+KK SGAL G +EGA  GK E DK        
Sbjct: 195 EFALRLEPQNQEIKKQFAESKSLLEKAILKKVSGALTGSVEGAQPGKSEVDKNNNVQKPL 254

Query: 719 AGRV 730
           +GRV
Sbjct: 255 SGRV 258


>ref|XP_006339932.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X1
           [Solanum tuberosum]
          Length = 468

 Score =  261 bits (666), Expect = 2e-67
 Identities = 137/224 (61%), Positives = 169/224 (75%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWELS K KDKK+++   G+  L    +  ++ +S L  +P+V+G +    TS     + 
Sbjct: 25  DWELSLKGKDKKMKSQAHGKETL----REDWSRTSELLTSPQVNGTRVGKSTSIR---SA 77

Query: 182 VRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALSP 361
              +++ K Y  +S L+S + S+E  ++ANSEKELGNE FKQKKFNEAIDCYSRSIALSP
Sbjct: 78  AGPYNYSKNYNPISHLSSELISEESNINANSEKELGNECFKQKKFNEAIDCYSRSIALSP 137

Query: 362 TAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDVE 541
           TAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRYIKAYSRRST+RKELGKLK+SI+D E
Sbjct: 138 TAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYSRRSTSRKELGKLKESIEDAE 197

Query: 542 FALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHK 673
           FALRLEPQN +IKKQ+ E KAL EKEI K+ SGA     + A K
Sbjct: 198 FALRLEPQNPEIKKQYGEVKALYEKEIRKRVSGATDVSAQRAQK 241


>ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 2 [Theobroma cacao] gi|508719764|gb|EOY11661.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 2 [Theobroma cacao]
          Length = 422

 Score =  260 bits (664), Expect = 4e-67
 Identities = 138/239 (57%), Positives = 176/239 (73%), Gaps = 1/239 (0%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWELS KEKDK ++              S  +D  +L  N +  GR T   +    +T +
Sbjct: 22  DWELSLKEKDKIMK--------------SQASDKEQLKTNEK--GRPTGKSSLIDSSTTS 65

Query: 182 VRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALSP 361
            RQ+D+L+ Y++ + L+S+  ++E + DA SEKELGNE+FKQKKF EAIDCYSRSI LSP
Sbjct: 66  SRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIGLSP 125

Query: 362 TAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDVE 541
           TAVA+ANRAMAY+K+K+FQEAE+DCTEALNLDDRYIKAYSRR+TARKELGKLK+SI+D E
Sbjct: 126 TAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDTE 185

Query: 542 FALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHK-GKVEADKKKYALNS 715
           FALRLEP NQ+IKKQHAE K+L EKEI++KASG L   ++ A + GK E  +    ++S
Sbjct: 186 FALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKSETKENGLGMHS 244


>ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated protein 3-like [Vitis
           vinifera]
          Length = 474

 Score =  259 bits (663), Expect = 5e-67
 Identities = 134/225 (59%), Positives = 175/225 (77%), Gaps = 1/225 (0%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPS-QSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTN 178
           DWELS KEKDKK++A    +   D P+ + +   SS+LS +P V  R  + ++ +     
Sbjct: 26  DWELSLKEKDKKMKAQAEEK---DVPTARGNVKHSSKLSSSPGVSLRLGQSRSDT----- 77

Query: 179 TVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALS 358
             RQH++ + ++ +S+++S+  ++E + DA SEKELGNE+FKQ+KF EAIDCYSRSIAL 
Sbjct: 78  --RQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKFKEAIDCYSRSIALL 135

Query: 359 PTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDV 538
           PTAVAYANRAMAYIK+KRF+EAE+DC EALNLDDRYIKAYSRR+TARKELGK K++ +D 
Sbjct: 136 PTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATARKELGKFKEATEDA 195

Query: 539 EFALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHK 673
           EFALRLEPQNQ+IKKQ+AE K+L EKEI++KASGAL   ++G  K
Sbjct: 196 EFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQK 240


>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
          Length = 1097

 Score =  259 bits (663), Expect = 5e-67
 Identities = 134/225 (59%), Positives = 175/225 (77%), Gaps = 1/225 (0%)
 Frame = +2

Query: 2    DWELSFKEKDKKLRADTLGRGKLDNPS-QSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTN 178
            DWELS KEKDKK++A    +   D P+ + +   SS+LS +P V  R  + ++ +     
Sbjct: 649  DWELSLKEKDKKMKAQAEEK---DVPTARGNVKHSSKLSSSPGVSLRLGQSRSDT----- 700

Query: 179  TVRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALS 358
              RQH++ + ++ +S+++S+  ++E + DA SEKELGNE+FKQ+KF EAIDCYSRSIAL 
Sbjct: 701  --RQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKFKEAIDCYSRSIALL 758

Query: 359  PTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDV 538
            PTAVAYANRAMAYIK+KRF+EAE+DC EALNLDDRYIKAYSRR+TARKELGK K++ +D 
Sbjct: 759  PTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATARKELGKFKEATEDA 818

Query: 539  EFALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHK 673
            EFALRLEPQNQ+IKKQ+AE K+L EKEI++KASGAL   ++G  K
Sbjct: 819  EFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQK 863


>ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 4 [Theobroma cacao] gi|508719766|gb|EOY11663.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 4 [Theobroma cacao]
          Length = 421

 Score =  259 bits (661), Expect = 9e-67
 Identities = 136/239 (56%), Positives = 174/239 (72%), Gaps = 1/239 (0%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWELS KEKDK +++    + +L N                   GR T   +    +T +
Sbjct: 22  DWELSLKEKDKIMKSQASDKEQLTNEK-----------------GRPTGKSSLIDSSTTS 64

Query: 182 VRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALSP 361
            RQ+D+L+ Y++ + L+S+  ++E + DA SEKELGNE+FKQKKF EAIDCYSRSI LSP
Sbjct: 65  SRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIGLSP 124

Query: 362 TAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDVE 541
           TAVA+ANRAMAY+K+K+FQEAE+DCTEALNLDDRYIKAYSRR+TARKELGKLK+SI+D E
Sbjct: 125 TAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDTE 184

Query: 542 FALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHK-GKVEADKKKYALNS 715
           FALRLEP NQ+IKKQHAE K+L EKEI++KASG L   ++ A + GK E  +    ++S
Sbjct: 185 FALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKSETKENGLGMHS 243


>ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           1 [Theobroma cacao] gi|508719763|gb|EOY11660.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 468

 Score =  259 bits (661), Expect = 9e-67
 Identities = 136/239 (56%), Positives = 174/239 (72%), Gaps = 1/239 (0%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWELS KEKDK +++    + +L N                   GR T   +    +T +
Sbjct: 22  DWELSLKEKDKIMKSQASDKEQLTNEK-----------------GRPTGKSSLIDSSTTS 64

Query: 182 VRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALSP 361
            RQ+D+L+ Y++ + L+S+  ++E + DA SEKELGNE+FKQKKF EAIDCYSRSI LSP
Sbjct: 65  SRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCYSRSIGLSP 124

Query: 362 TAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDVE 541
           TAVA+ANRAMAY+K+K+FQEAE+DCTEALNLDDRYIKAYSRR+TARKELGKLK+SI+D E
Sbjct: 125 TAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDTE 184

Query: 542 FALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHK-GKVEADKKKYALNS 715
           FALRLEP NQ+IKKQHAE K+L EKEI++KASG L   ++ A + GK E  +    ++S
Sbjct: 185 FALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQEAQEVGKSETKENGLGMHS 243


>ref|XP_004248819.1| PREDICTED: RNA polymerase II-associated protein 3-like [Solanum
           lycopersicum]
          Length = 470

 Score =  254 bits (650), Expect = 2e-65
 Identities = 133/224 (59%), Positives = 168/224 (75%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWEL+ K KDKK+++   G+  L    +  ++ +S    +P+ +G +   K++S    N 
Sbjct: 25  DWELALKGKDKKMKSQAGGKETL----KEDWSRTSEPLTSPQANGTQQVGKSTSI--RNA 78

Query: 182 VRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALSP 361
              + + K Y  +S L+S + S+E  ++ANSEKELGNE FKQKKFNEAIDCYSRSIALSP
Sbjct: 79  AGPYSYSKNYNPISHLSSELISEESNINANSEKELGNECFKQKKFNEAIDCYSRSIALSP 138

Query: 362 TAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDVE 541
           TAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRYIKAYSRRST+RKELGKLK+SI+D E
Sbjct: 139 TAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYSRRSTSRKELGKLKESIEDAE 198

Query: 542 FALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHK 673
           FAL LEP+N +IKKQ+ E KAL EKEI+K+ SGA     +G  K
Sbjct: 199 FALWLEPRNPEIKKQYGEVKALYEKEILKRVSGATDVSAQGPQK 242


>ref|XP_006339933.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X2
           [Solanum tuberosum]
          Length = 467

 Score =  254 bits (649), Expect = 2e-65
 Identities = 136/224 (60%), Positives = 168/224 (75%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWELS K KDKK+++   G+  L    +  ++ +S L  +P+V+G +    TS     + 
Sbjct: 25  DWELSLKGKDKKMKSQAHGKETL----REDWSRTSELLTSPQVNGTRVGKSTSIR---SA 77

Query: 182 VRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALSP 361
              +++ K Y  +S L+S + S+E  ++ANSEKELGNE FKQKKFNEAIDCYSRSIALSP
Sbjct: 78  AGPYNYSKNYNPISHLSSELISEESNINANSEKELGNECFKQKKFNEAIDCYSRSIALSP 137

Query: 362 TAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDVE 541
           TAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRYIKAYSRRST+RKELGKLK+SI+D E
Sbjct: 138 TAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYSRRSTSRKELGKLKESIEDAE 197

Query: 542 FALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHK 673
           FALRLEPQN +IKKQ+ E KAL EK I K+ SGA     + A K
Sbjct: 198 FALRLEPQNPEIKKQYGEVKALYEK-IRKRVSGATDVSAQRAQK 240


>ref|XP_006339935.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X4
           [Solanum tuberosum]
          Length = 419

 Score =  251 bits (642), Expect = 1e-64
 Identities = 131/213 (61%), Positives = 162/213 (76%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWELS K KDKK+++   G+  L    +  ++ +S L  +P+V+G +    TS     + 
Sbjct: 25  DWELSLKGKDKKMKSQAHGKETL----REDWSRTSELLTSPQVNGTRVGKSTSIR---SA 77

Query: 182 VRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALSP 361
              +++ K Y  +S L+S + S+E  ++ANSEKELGNE FKQKKFNEAIDCYSRSIALSP
Sbjct: 78  AGPYNYSKNYNPISHLSSELISEESNINANSEKELGNECFKQKKFNEAIDCYSRSIALSP 137

Query: 362 TAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDVE 541
           TAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRYIKAYSRRST+RKELGKLK+SI+D E
Sbjct: 138 TAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYSRRSTSRKELGKLKESIEDAE 197

Query: 542 FALRLEPQNQDIKKQHAECKALLEKEIMKKASG 640
           FALRLEPQN +IKKQ+ E KAL EKE  +   G
Sbjct: 198 FALRLEPQNPEIKKQYGEVKALYEKENNRDVPG 230


>ref|XP_004302236.1| PREDICTED: RNA polymerase II-associated protein 3-like [Fragaria
           vesca subsp. vesca]
          Length = 407

 Score =  249 bits (636), Expect = 7e-64
 Identities = 135/228 (59%), Positives = 167/228 (73%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWELS K+KDKK+R           P Q            P  +  K+RD  +S+Y+TN 
Sbjct: 25  DWELSLKDKDKKMR-----------PQQ------------PNKEAPKSRDFGTSSYSTN- 60

Query: 182 VRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALSP 361
                    YE ++ ++S+ +S++G+ DA SEK+LGNE+FKQKKF EAIDCYSRSIAL+P
Sbjct: 61  ---------YEPMNTVSSSFTSEDGLPDAASEKDLGNEYFKQKKFKEAIDCYSRSIALTP 111

Query: 362 TAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDVE 541
           TAVA+ANRAM+YIK+KRFQEAENDCTEALNLDDRYIKAYSRR+TARKELGKLK+SI+D E
Sbjct: 112 TAVAFANRAMSYIKIKRFQEAENDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDAE 171

Query: 542 FALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHKGKVE 685
           FALRLEP NQ+IKKQ+AE K+L EK I++K SGA+   +    K KVE
Sbjct: 172 FALRLEPHNQEIKKQYAEAKSLYEKGILQKVSGAI--KISEQDKQKVE 217


>ref|XP_007031162.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 5 [Theobroma cacao] gi|508719767|gb|EOY11664.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 5 [Theobroma cacao]
          Length = 389

 Score =  248 bits (633), Expect = 2e-63
 Identities = 128/212 (60%), Positives = 165/212 (77%), Gaps = 1/212 (0%)
 Frame = +2

Query: 83  QSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVV 262
           +S  +D  +L  N +  GR T   +    +T + RQ+D+L+ Y++ + L+S+  ++E + 
Sbjct: 2   KSQASDKEQLKTNEK--GRPTGKSSLIDSSTTSSRQYDYLQNYDKFNSLSSSFVTEENMP 59

Query: 263 DANSEKELGNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTE 442
           DA SEKELGNE+FKQKKF EAIDCYSRSI LSPTAVA+ANRAMAY+K+K+FQEAE+DCTE
Sbjct: 60  DAASEKELGNEYFKQKKFKEAIDCYSRSIGLSPTAVAHANRAMAYLKIKKFQEAEDDCTE 119

Query: 443 ALNLDDRYIKAYSRRSTARKELGKLKQSIDDVEFALRLEPQNQDIKKQHAECKALLEKEI 622
           ALNLDDRYIKAYSRR+TARKELGKLK+SI+D EFALRLEP NQ+IKKQHAE K+L EKEI
Sbjct: 120 ALNLDDRYIKAYSRRATARKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEI 179

Query: 623 MKKASGALAGPLEGAHK-GKVEADKKKYALNS 715
           ++KASG L   ++ A + GK E  +    ++S
Sbjct: 180 LQKASGVLRKSMQEAQEVGKSETKENGLGMHS 211


>ref|XP_007031160.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           3, partial [Theobroma cacao] gi|508719765|gb|EOY11662.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 3, partial [Theobroma cacao]
          Length = 412

 Score =  248 bits (633), Expect = 2e-63
 Identities = 128/212 (60%), Positives = 165/212 (77%), Gaps = 1/212 (0%)
 Frame = +2

Query: 83  QSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNTVRQHDHLKKYEELSQLASTVSSQEGVV 262
           +S  +D  +L  N +  GR T   +    +T + RQ+D+L+ Y++ + L+S+  ++E + 
Sbjct: 2   KSQASDKEQLKTNEK--GRPTGKSSLIDSSTTSSRQYDYLQNYDKFNSLSSSFVTEENMP 59

Query: 263 DANSEKELGNEFFKQKKFNEAIDCYSRSIALSPTAVAYANRAMAYIKVKRFQEAENDCTE 442
           DA SEKELGNE+FKQKKF EAIDCYSRSI LSPTAVA+ANRAMAY+K+K+FQEAE+DCTE
Sbjct: 60  DAASEKELGNEYFKQKKFKEAIDCYSRSIGLSPTAVAHANRAMAYLKIKKFQEAEDDCTE 119

Query: 443 ALNLDDRYIKAYSRRSTARKELGKLKQSIDDVEFALRLEPQNQDIKKQHAECKALLEKEI 622
           ALNLDDRYIKAYSRR+TARKELGKLK+SI+D EFALRLEP NQ+IKKQHAE K+L EKEI
Sbjct: 120 ALNLDDRYIKAYSRRATARKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEI 179

Query: 623 MKKASGALAGPLEGAHK-GKVEADKKKYALNS 715
           ++KASG L   ++ A + GK E  +    ++S
Sbjct: 180 LQKASGVLRKSMQEAQEVGKSETKENGLGMHS 211


>ref|XP_006382393.1| hypothetical protein POPTR_0005s01710g [Populus trichocarpa]
           gi|550337753|gb|ERP60190.1| hypothetical protein
           POPTR_0005s01710g [Populus trichocarpa]
          Length = 402

 Score =  245 bits (626), Expect = 1e-62
 Identities = 133/239 (55%), Positives = 177/239 (74%), Gaps = 2/239 (0%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWEL  K+ DKK++                    SR SD    +  ++  KTS+A ++ +
Sbjct: 25  DWEL-LKDTDKKMKK------------------KSRASDVKIGEDGRSEGKTSAADSSRS 65

Query: 182 VR-QHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALS 358
              Q+++ + +  +++L+S+ ++ E  VDA +EKELGNE+FKQKKFNEAI+CYSRSIALS
Sbjct: 66  GSGQYEYSRNFGAINRLSSSFTTDEITVDATTEKELGNEYFKQKKFNEAIECYSRSIALS 125

Query: 359 PTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDV 538
           PTAVAYANRAMAY+K+KRF+EAE+DCTEALNLDDRYIKAYSRR+TARKELGKLK+SI+D 
Sbjct: 126 PTAVAYANRAMAYLKIKRFREAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDS 185

Query: 539 EFALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHK-GKVEADKKKYALN 712
           EFAL+LEP NQ+IKKQ+AE K+L EKEI++KASG L   L+G  + G+ EA    +A++
Sbjct: 186 EFALKLEPNNQEIKKQYAEVKSLYEKEILQKASGTLRSSLQGTQQGGRSEASVNGHAVH 244


>ref|XP_006382392.1| hypothetical protein POPTR_0005s01710g [Populus trichocarpa]
           gi|550337752|gb|ERP60189.1| hypothetical protein
           POPTR_0005s01710g [Populus trichocarpa]
          Length = 462

 Score =  245 bits (626), Expect = 1e-62
 Identities = 133/239 (55%), Positives = 177/239 (74%), Gaps = 2/239 (0%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWEL  K+ DKK++                    SR SD    +  ++  KTS+A ++ +
Sbjct: 15  DWEL-LKDTDKKMKK------------------KSRASDVKIGEDGRSEGKTSAADSSRS 55

Query: 182 VR-QHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALS 358
              Q+++ + +  +++L+S+ ++ E  VDA +EKELGNE+FKQKKFNEAI+CYSRSIALS
Sbjct: 56  GSGQYEYSRNFGAINRLSSSFTTDEITVDATTEKELGNEYFKQKKFNEAIECYSRSIALS 115

Query: 359 PTAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDV 538
           PTAVAYANRAMAY+K+KRF+EAE+DCTEALNLDDRYIKAYSRR+TARKELGKLK+SI+D 
Sbjct: 116 PTAVAYANRAMAYLKIKRFREAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDS 175

Query: 539 EFALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHK-GKVEADKKKYALN 712
           EFAL+LEP NQ+IKKQ+AE K+L EKEI++KASG L   L+G  + G+ EA    +A++
Sbjct: 176 EFALKLEPNNQEIKKQYAEVKSLYEKEILQKASGTLRSSLQGTQQGGRSEASVNGHAVH 234


>ref|XP_006375724.1| hypothetical protein POPTR_0013s00980g [Populus trichocarpa]
           gi|550324657|gb|ERP53521.1| hypothetical protein
           POPTR_0013s00980g [Populus trichocarpa]
          Length = 260

 Score =  244 bits (623), Expect = 2e-62
 Identities = 129/238 (54%), Positives = 173/238 (72%), Gaps = 1/238 (0%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWEL  K+ DKK++                    S+ SD    +  ++  KTS+   +++
Sbjct: 15  DWEL-LKDTDKKMKK------------------KSQASDMKIGEDERSTGKTSAVDFSSS 55

Query: 182 VRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALSP 361
              +DH + ++ +++L+++ +  E  VDA +EKELGNE+FKQKK+ EAI+CYSRSIALSP
Sbjct: 56  SGMYDHARNFDAINRLSNSFAIDESTVDATTEKELGNEYFKQKKYKEAIECYSRSIALSP 115

Query: 362 TAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDVE 541
           TAVAYANRAMAY+K+KRF EAE+DCTEALNLDDRYIKAYSRR+T RKELGKLK+SI+D E
Sbjct: 116 TAVAYANRAMAYLKIKRFPEAEDDCTEALNLDDRYIKAYSRRATTRKELGKLKESIEDSE 175

Query: 542 FALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHK-GKVEADKKKYALN 712
           FAL+LEP NQ+IKKQ+AE K+L EKEI++KAS +L   L+GA K G+ EA    +A++
Sbjct: 176 FALKLEPNNQEIKKQYAEVKSLYEKEILQKASESLRSSLQGAQKGGRSEASVNGHAVH 233


>ref|XP_006339934.1| PREDICTED: RNA polymerase II-associated protein 3-like isoform X3
           [Solanum tuberosum]
          Length = 461

 Score =  242 bits (617), Expect = 1e-61
 Identities = 131/224 (58%), Positives = 163/224 (72%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWELS K KDKK+++   G+  L    +  ++ +S L  +P+V+G +    TS     + 
Sbjct: 25  DWELSLKGKDKKMKSQAHGKETL----REDWSRTSELLTSPQVNGTRVGKSTSIR---SA 77

Query: 182 VRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALSP 361
              +++ K Y  +S L+S + S+E  ++ANSEKEL       KKFNEAIDCYSRSIALSP
Sbjct: 78  AGPYNYSKNYNPISHLSSELISEESNINANSEKEL-------KKFNEAIDCYSRSIALSP 130

Query: 362 TAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDVE 541
           TAV+YANRAMAY+K+KRFQEAENDCTEALNLDDRYIKAYSRRST+RKELGKLK+SI+D E
Sbjct: 131 TAVSYANRAMAYLKIKRFQEAENDCTEALNLDDRYIKAYSRRSTSRKELGKLKESIEDAE 190

Query: 542 FALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHK 673
           FALRLEPQN +IKKQ+ E KAL EKEI K+ SGA     + A K
Sbjct: 191 FALRLEPQNPEIKKQYGEVKALYEKEIRKRVSGATDVSAQRAQK 234


>ref|XP_007205290.1| hypothetical protein PRUPE_ppa006661mg [Prunus persica]
           gi|462400932|gb|EMJ06489.1| hypothetical protein
           PRUPE_ppa006661mg [Prunus persica]
          Length = 401

 Score =  242 bits (617), Expect = 1e-61
 Identities = 131/229 (57%), Positives = 165/229 (72%), Gaps = 1/229 (0%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWELS K+KDKK+R     + KL                       KTRD  +S+ N   
Sbjct: 15  DWELSLKDKDKKMRPKDSHQEKL-----------------------KTRDLGTSSGN--- 48

Query: 182 VRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALSP 361
              +D+ +  + ++ ++S+  S++ + DA SEKELGNE+FKQKKF EAIDCYSRSIALSP
Sbjct: 49  ---YDYSRNLDSINTMSSSFISEDSLPDAASEKELGNEYFKQKKFREAIDCYSRSIALSP 105

Query: 362 TAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDVE 541
           +AVAYANRAMAYIK+K FQEAE+DCTEALNLDDRYIKAYSRR+TARKELGKLK+SI+D E
Sbjct: 106 SAVAYANRAMAYIKIKSFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDAE 165

Query: 542 FALRLEPQNQDIKKQHAECKALLEKEIMKKASGALAGPLEGAHK-GKVE 685
           FALRLEPQNQ+IKKQ+ E K+L +K I++KASGA    ++   K GK++
Sbjct: 166 FALRLEPQNQEIKKQYTEAKSLYDKTILQKASGAQKNSVQEMRKVGKLD 214


>ref|XP_004144746.1| PREDICTED: RNA polymerase II-associated protein 3-like [Cucumis
           sativus] gi|449517788|ref|XP_004165926.1| PREDICTED: RNA
           polymerase II-associated protein 3-like [Cucumis
           sativus]
          Length = 458

 Score =  236 bits (603), Expect = 5e-60
 Identities = 122/214 (57%), Positives = 156/214 (72%)
 Frame = +2

Query: 2   DWELSFKEKDKKLRADTLGRGKLDNPSQSSYNDSSRLSDNPRVDGRKTRDKTSSAYNTNT 181
           DWE+SFK KDKKL+   +G+ K D                     R+  +K S+A     
Sbjct: 25  DWEVSFKGKDKKLKPQAIGKEKED---------------------RRQTEKASAA----- 58

Query: 182 VRQHDHLKKYEELSQLASTVSSQEGVVDANSEKELGNEFFKQKKFNEAIDCYSRSIALSP 361
               D++K+Y+ +++L+    ++   VDA SEKE GNE+FKQKKF EAIDCYSRSIALSP
Sbjct: 59  ----DYMKQYDAVNRLSRNFQTEGSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSP 114

Query: 362 TAVAYANRAMAYIKVKRFQEAENDCTEALNLDDRYIKAYSRRSTARKELGKLKQSIDDVE 541
           TAVA+ANRAMAY+K++RFQEAE+DCTEALNLDDRYIKAYSRR+TARKELGK K++++D E
Sbjct: 115 TAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAE 174

Query: 542 FALRLEPQNQDIKKQHAECKALLEKEIMKKASGA 643
           FA RLEP NQ+IKKQHA+ +A + K I++KASGA
Sbjct: 175 FAQRLEPNNQEIKKQHADLRAFVGKAILEKASGA 208