BLASTX nr result

ID: Mentha22_contig00028719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00028719
         (557 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44530.1| hypothetical protein MIMGU_mgv1a000959mg [Mimulus...   160   2e-37
ref|XP_004231953.1| PREDICTED: putative nuclear matrix constitue...    96   6e-18
ref|XP_006363793.1| PREDICTED: putative nuclear matrix constitue...    94   2e-17
dbj|BAI67716.1| nuclear matrix constituent protein 2 [Apium grav...    81   2e-13
dbj|BAI67718.1| nuclear matrix constituent protein 2 [Daucus car...    79   8e-13

>gb|EYU44530.1| hypothetical protein MIMGU_mgv1a000959mg [Mimulus guttatus]
          Length = 932

 Score =  160 bits (405), Expect = 2e-37
 Identities = 81/136 (59%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
 Frame = -3

Query: 555  GHNTSGRKESDKSSSPLSAPFSWLKRCADTVLEQRHSNKKRKKEKDMIDHVSEDMTPSSP 376
            GHN  G  E DK SSPLSAPFSWLKRCADT+LEQR SNKKR++EKD+  H SE+ TPSS 
Sbjct: 797  GHNAIGTVELDKLSSPLSAPFSWLKRCADTLLEQRQSNKKRRREKDVTTHGSENSTPSST 856

Query: 375  QKYSNTSKTDF-VEPSDRTQVGTETTVYIDKVVTVEEITTFDIGSITRNSEVHETSIQHN 199
            QKYSN SK +  V   ++T  G ETTVYIDK++T++E+TT D+  IT ++E  E   QH 
Sbjct: 857  QKYSNASKIEHTVTQFNQTPDGGETTVYIDKIITIQEVTTVDVERITGDNE--EAEFQHK 914

Query: 198  GERVQTNGDVQQEING 151
             E+++ NGDV+ EING
Sbjct: 915  DEKLENNGDVELEING 930


>ref|XP_004231953.1| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Solanum lycopersicum]
          Length = 936

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 55/134 (41%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
 Frame = -3

Query: 546  TSGRKESDKSSSPLSAPFSWLKRCADTVLEQRHSNKKRKKEKDMIDHVSED--MTPSSPQ 373
            TS  KE+  SSS LS PFSWLKRCADT+L++  SNK+R+++ D I  ++E+    P  P 
Sbjct: 791  TSIMKENGNSSSTLSTPFSWLKRCADTLLDRTPSNKRRREDGDFISQLTENGASCPLPPT 850

Query: 372  KYSNTSKTDFVEPSDRTQVGTETTVYIDKVVTVEEITTFDIGSITRNSEVHETSIQHNGE 193
              +   +   V P+       ETTVYIDK+VTV E+T  D+  +T  S    T    +G 
Sbjct: 851  PDAPDVENLEVLPNQTHIAAEETTVYIDKIVTVHEVTEIDVRKVTEGSP--GTLSGDSGR 908

Query: 192  RVQTNGDVQQEING 151
            +V  NG ++ + NG
Sbjct: 909  KVGNNGSLESDQNG 922


>ref|XP_006363793.1| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Solanum tuberosum]
          Length = 937

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
 Frame = -3

Query: 534  KESDKSSSPLSAPFSWLKRCADTVLEQRHSNKKRKKEKDMIDHVSEDMTPSSPQKYSNTS 355
            KE+  SSS LS PFSWLKRCADT+L++  SNK+R+++   I  ++E     +     +  
Sbjct: 796  KENGNSSSTLSTPFSWLKRCADTLLDRTPSNKRRREDGHFISQLTEYGASGTLSSSPDAP 855

Query: 354  KTDFVE--PSDRTQVGTETTVYIDKVVTVEEITTFDIGSITRNSEVHETSIQHNGERVQT 181
              + +E  P+       ETTVYIDK+VTV E+T  D+  +T  S   ET    +G +V  
Sbjct: 856  DVEHLEVLPNHTPIAAEETTVYIDKIVTVHEVTEIDVRKVTEGS--LETLSGESGRKVGN 913

Query: 180  NGDVQQEING 151
            NG +Q + NG
Sbjct: 914  NGSLQSDKNG 923


>dbj|BAI67716.1| nuclear matrix constituent protein 2 [Apium graveolens]
          Length = 925

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 46/130 (35%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
 Frame = -3

Query: 549  NTSGRKESDKSSSPLSAPFSWLKRCADTVLEQRHSNKKRKKEKDMIDHVSEDMTPSSPQK 370
            NTS  K S   S P+S PFSWLKRCA ++LEQ+ SNKK +  +++++  +      +P+ 
Sbjct: 780  NTSPGKSSVIISPPVSTPFSWLKRCASSLLEQKASNKKMRHSEEIVNPSTISARLDAPE- 838

Query: 369  YSNTSKTDFVEPSDRTQV-GTETTVYIDKVVTVEEITTFDIGSITRNSEVHETSIQHNG- 196
                     V+  ++  V   ETTVYIDK++T+ E+T+F+ G +  NS+  E  +  +  
Sbjct: 839  -----DEHAVKSVNQAPVHAKETTVYIDKIITIREVTSFNDGRVNGNSQDPEKGLSLSAD 893

Query: 195  ERVQTNGDVQ 166
            E+++ N D++
Sbjct: 894  EKLEGNDDIK 903


>dbj|BAI67718.1| nuclear matrix constituent protein 2 [Daucus carota]
          Length = 927

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
 Frame = -3

Query: 549  NTSGRKESDKSSSPLSAPFSWLKRCADTVLEQRHSNKKRKKEKDMIDHVSEDMTPSSPQK 370
            N S    S   S PLS+PFSWLKRCA ++LEQ+ SNKK +       H  E +TPS+   
Sbjct: 781  NASSGNGSVILSPPLSSPFSWLKRCASSLLEQKVSNKKMR-------HSEEIITPSTIPA 833

Query: 369  YSNTSKTDFVEPSDRTQV---GTETTVYIDKVVTVEEITTFDIGSITRNSE-VHETSIQH 202
              N    +    S   Q      ETTVYIDK++T+ E+T+F+   +  N++ + E   Q 
Sbjct: 834  RLNAPDDEHAVISANQQTPVHAKETTVYIDKIITIREVTSFNDAIVDGNNQNLEEALSQR 893

Query: 201  NGERVQTNGDVQQE 160
              E+++ + +++ E
Sbjct: 894  AEEKLEDDNNIESE 907


Top