BLASTX nr result

ID: Mentha22_contig00028679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00028679
         (1639 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]   221   7e-55
emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]   219   2e-54
emb|CAN79644.1| hypothetical protein VITISV_033788 [Vitis vinifera]   211   6e-52
ref|XP_007009039.1| Copia-like retrotransposable element, putati...   202   4e-49
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi...   202   5e-49
gb|AAL55241.1|AF295693_1 polyprotein [Anopheles gambiae]              183   9e-48
emb|CAN72675.1| hypothetical protein VITISV_020405 [Vitis vinifera]   197   2e-47
emb|CAN69956.1| hypothetical protein VITISV_032883 [Vitis vinifera]   194   1e-46
gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsi...   193   2e-46
ref|XP_007030765.1| Uncharacterized protein TCM_026511 [Theobrom...   192   5e-46
ref|XP_003376336.1| retrovirus-related Pol polyprotein from tran...   192   5e-46
ref|XP_003376808.1| retrovirus-related Pol polyprotein from tran...   192   5e-46
ref|XP_007038256.1| Uncharacterized protein TCM_014834 [Theobrom...   190   1e-45
ref|XP_969432.2| PREDICTED: similar to Copia protein (Gag-int-po...   190   2e-45
gb|EFA07743.1| hypothetical protein TcasGA2_TC002223 [Tribolium ...   190   2e-45
emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera]   190   2e-45
ref|XP_007014929.1| Uncharacterized protein TCM_040529 [Theobrom...   188   5e-45
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   176   9e-45
emb|CAN59755.1| hypothetical protein VITISV_034567 [Vitis vinifera]   187   2e-44
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         175   2e-44

>emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]
          Length = 2041

 Score =  221 bits (563), Expect = 7e-55
 Identities = 136/372 (36%), Positives = 196/372 (52%), Gaps = 20/372 (5%)
 Frame = -3

Query: 1139 IYVPDLTCSLLSWIKLRSEGYHLYDNGIVMRLIRENITFL---------EAKFVGN---- 999
            +Y+PDL  +LLS  ++   GY +          +EN  F+         + K  GN    
Sbjct: 1108 LYIPDLDQNLLSVAQMLRNGYXVS--------FKENFCFISDVHGTEIXKIKMNGNSFYL 1159

Query: 998  -LPVVTEYNQSTMHNAFVTYEFWHEALCHAAPASIAKTGKLIQDINIIPDCPK----EFH 834
             L +V  +  S   +  V    WH+   H    S+    + +Q+  ++ D P+       
Sbjct: 1160 KLDLVEGHVFSAKIDESVV---WHKRYXHFNLKSL----RFMQEAXMVEDMPEISVNAQT 1212

Query: 833  CEACALAKSHHST-PKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSN 657
            CE+C L K      P+    RA  + E IHSD+CGP+  +SLSN +Y+  F+DD +R + 
Sbjct: 1213 CESCELGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDFSRMTW 1272

Query: 656  IQFLRNKSDAAMVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTP 477
            + FL+ KS    +   F   +ETQ G   K  R+DNGGEY + + + F  + GI+H LT 
Sbjct: 1273 VYFLKTKSQVLSMFKSFKKMVETQSGQXVKVLRTDNGGEYTSKEFSVFCQEAGIVHQLTA 1332

Query: 476  PYSPESNGVAERLNRSISEAIRAMLLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPY 300
            PYSP+ NGV+ER NR++ E  R ML      K LWAEA NT +Y  NRL   +V  +TP 
Sbjct: 1333 PYSPQXNGVSERKNRTVMEMARCMLFEKKLPKLLWAEAVNTSVYLLNRLPTKSVQSKTPI 1392

Query: 299  EAFHGKKPSILNFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVRE 120
            EA+ G KPS+ + + F   CY+H+P   R    KL +RAEKG+FVGY    + YRIY   
Sbjct: 1393 EAWSGVKPSVKHLKVFGSFCYLHVPSVKR---GKLDERAEKGVFVGYAAESKGYRIYSLS 1449

Query: 119  KRRICVSADVEF 84
            + +I +S DV F
Sbjct: 1450 RMKIVISRDVHF 1461


>emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]
          Length = 1269

 Score =  219 bits (559), Expect = 2e-54
 Identities = 135/372 (36%), Positives = 196/372 (52%), Gaps = 20/372 (5%)
 Frame = -3

Query: 1139 IYVPDLTCSLLSWIKLRSEGYHLYDNGIVMRLIRENITFL---------EAKFVGN---- 999
            +Y+PDL  +LLS  ++   GY +          +EN  F+         + K  GN    
Sbjct: 375  LYIPDLDQNLLSVAQMLRNGYAVS--------FKENFCFISDVHGTKIAKIKMNGNSFYL 426

Query: 998  -LPVVTEYNQSTMHNAFVTYEFWHEALCHAAPASIAKTGKLIQDINIIPDCPK----EFH 834
             L +V  +  S   +  V    WH+   H    S+    + +Q+  ++ D P+       
Sbjct: 427  KLDLVEGHVFSAKIDESVV---WHKRYGHFNLKSL----RFMQEAGMVEDMPEISVNAQT 479

Query: 833  CEACALAKSHHST-PKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSN 657
            CE+C L K      P+    RA  + E IHSD+CGP+  +SLSN +Y+  F+DD +R + 
Sbjct: 480  CESCELGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTTSLSNNVYFALFIDDFSRMTW 539

Query: 656  IQFLRNKSDAAMVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTP 477
            + FL+ KS    +   F   +ETQ G   K  R+DNGGEY + + + F  + GI+H LT 
Sbjct: 540  VYFLKTKSQVLSMFKSFKKMVETQSGQNVKVLRTDNGGEYTSKEFSVFCQEAGIVHQLTA 599

Query: 476  PYSPESNGVAERLNRSISEAIRAMLLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPY 300
            PYSP+ NGV++R NR++ E  R ML      K LWAEA NT +Y  NRL   +V  +TP 
Sbjct: 600  PYSPQQNGVSKRKNRTVMEMARCMLFEKKLPKLLWAEAVNTSVYLLNRLPTKSVQSKTPI 659

Query: 299  EAFHGKKPSILNFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVRE 120
            EA+ G KPS+ + + F   CY+H+P   R    KL +RAEKG+FVGY    + YRIY   
Sbjct: 660  EAWSGVKPSVKHLKVFGSFCYLHVPSVKR---GKLDERAEKGVFVGYVAESKGYRIYSLS 716

Query: 119  KRRICVSADVEF 84
            + +I +S DV F
Sbjct: 717  RMKIVISRDVHF 728


>emb|CAN79644.1| hypothetical protein VITISV_033788 [Vitis vinifera]
          Length = 1181

 Score =  211 bits (538), Expect = 6e-52
 Identities = 125/347 (36%), Positives = 180/347 (51%), Gaps = 19/347 (5%)
 Frame = -3

Query: 1067 DNGIVMRLIRENITFLEAKFVGNLPVVTEYNQSTMHNAFVTYEFWHEALCHAAPAS---- 900
            D  I  ++   N   ++AK  G + ++T+     + N     +     L  A   S    
Sbjct: 351  DRSIQPKVKLGNGEVVQAKEKGTIAIITKRGTKIVTNVLYIPDLDQNLLSVAQMLSNGYA 410

Query: 899  ---------IAKTGKLIQDINIIPDCPK----EFHCEACALAKSHHST-PKPSKFRAKER 762
                     I  + + +Q+  ++ D P+        E+C L K      P+    RA  +
Sbjct: 411  VSFKENFCFITNSLRFMQEAGMVEDMPEISVNAQTYESCELGKQQQQPFPQNMSKRATHK 470

Query: 761  GEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFLRNKSDAAMVIIGFITELETQY 582
             E IHSD+CGP+ ++SLSN +Y+  F+DD  R + + FL+ KS    V   F   +ETQ 
Sbjct: 471  LELIHSDICGPMSIASLSNNVYFALFIDDLNRMTWVYFLKTKSQVLSVFKSFKKMVETQS 530

Query: 581  GCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSPESNGVAERLNRSISEAIRAML 402
            G   K  R+DNGGEY++ +   F  + GI+H LT PYSP+ NGV+ER N ++ E  R ML
Sbjct: 531  GQNVKVLRTDNGGEYISKEFNVFCQEAGIVHQLTAPYSPQQNGVSERKNITVMEMARCML 590

Query: 401  LPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPYEAFHGKKPSILNFQPFARECYVHIP 225
                  K LWAEA NT +Y  NRL   +V  +TP EA+ G KPS+ + + F   CY+H+P
Sbjct: 591  FEKKLPKLLWAEAINTSVYLLNRLPTKSVQSKTPIEAWSGVKPSVKHLKVFGSFCYLHVP 650

Query: 224  VSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKRRICVSADVEF 84
               R    KL +RAEKG+FVGY    + YRIY   K +I +S DV F
Sbjct: 651  FVKR---GKLDERAEKGVFVGYVVESKGYRIYSLSKMKIVISRDVHF 694


>ref|XP_007009039.1| Copia-like retrotransposable element, putative [Theobroma cacao]
            gi|508725952|gb|EOY17849.1| Copia-like retrotransposable
            element, putative [Theobroma cacao]
          Length = 1090

 Score =  202 bits (514), Expect = 4e-49
 Identities = 105/252 (41%), Positives = 154/252 (61%), Gaps = 2/252 (0%)
 Frame = -3

Query: 833  CEACALAK-SHHSTPKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSN 657
            C +C   K +  S PK S  RAK R E +HSD+ GP+   SL+ + Y++ F+DD +R + 
Sbjct: 425  CSSCQYGKLTRRSFPKASLNRAKHRLELVHSDVAGPMSEPSLNGSKYFVIFIDDMSRMTW 484

Query: 656  IQFLRNKSDAAMVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTP 477
            I F+++KS+   V   F  ++E + GCR K  R+DNGGEY +++  ++   +GI H LT 
Sbjct: 485  IYFIQHKSEVFSVFQKFKAKVENESGCRIKKLRTDNGGEYTSSEFISYLENEGIHHQLTA 544

Query: 476  PYSPESNGVAERLNRSISEAIRAMLLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPY 300
            PY PE NGV+ER NR+I E  R  L      K  WAE+ANT +Y +N L   AVN +TPY
Sbjct: 545  PYCPEQNGVSERKNRTIIEMSRCFLFKKKLPKSFWAESANTAVYLQNILITQAVNNETPY 604

Query: 299  EAFHGKKPSILNFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVRE 120
            EA++  +PS+ + + FA  CY+H+P   R    KL  +A+ G+F+GY++  + YRIY  E
Sbjct: 605  EAWYSTRPSVDHLRIFASICYLHVPEELR---DKLQPKAKLGVFIGYSQQSKAYRIYQIE 661

Query: 119  KRRICVSADVEF 84
              ++ VS  V F
Sbjct: 662  SGKVSVSIHVTF 673


>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1499

 Score =  202 bits (513), Expect = 5e-49
 Identities = 129/367 (35%), Positives = 203/367 (55%), Gaps = 15/367 (4%)
 Frame = -3

Query: 1139 IYVPDLTCSLLSWIKLRSEGYHLY--DNGIVMRLIRENITFLEAKFVG-NLPVVTEYNQS 969
            +YVP+L  +LLS  ++ S GY +   DN  V++ ++     L+ K    + P++ + ++ 
Sbjct: 383  LYVPELARNLLSVSQMISNGYRVIFEDNKCVIQDLKGR-KILDIKMKDRSFPIIWKKSRE 441

Query: 968  TMHNAFVTYE----FWHEALCHAAPASIAKTGKLIQDINIIPDCPK----EFHCEACALA 813
              + AF   E     WH+   H     I    + +Q + I+   PK    +  C AC + 
Sbjct: 442  ETYMAFEEKEEQTDLWHKRFGHVNYDKI----ETMQTLKIVEKLPKFEVIKGICAACEMG 497

Query: 812  K-SHHSTPKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFLRNK 636
            K S  S PK S+    +  E IHSD+CGP+   S++ + Y+++F+DD +R + + FL+NK
Sbjct: 498  KQSRRSFPKKSQSNTNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLKNK 557

Query: 635  SDAAMVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSPESN 456
            S+       F   +E Q   R K  R+D GGE+++ +      + GI H++T PYSP+ N
Sbjct: 558  SEVITKFKIFKPYVENQSESRIKRLRTDGGGEFLSREFIKLCQESGIHHEITTPYSPQQN 617

Query: 455  GVAERLNRSISEAIRAML--LPLNEKFLWAEAANTYIYTKNRLAHGAV-NGQTPYEAFHG 285
            GVAER NR++ E  R+M+    L+ KF WAEA  T  Y +NRL   ++  G TP E + G
Sbjct: 618  GVAERRNRTLVEMARSMIEEKKLSNKF-WAEAIATSTYLQNRLPSKSLEKGVTPMEIWSG 676

Query: 284  KKPSILNFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKRRIC 105
            KKPS+ + + F   CY+HIP   R    KL  +A++GIFVGY+   + YR+++  + +I 
Sbjct: 677  KKPSVDHLKVFGCVCYIHIPDEKR---RKLDTKAKQGIFVGYSNESKGYRVFLLNEEKIE 733

Query: 104  VSADVEF 84
            VS DV F
Sbjct: 734  VSKDVTF 740


>gb|AAL55241.1|AF295693_1 polyprotein [Anopheles gambiae]
          Length = 786

 Score =  183 bits (465), Expect(2) = 9e-48
 Identities = 125/368 (33%), Positives = 185/368 (50%), Gaps = 16/368 (4%)
 Frame = -3

Query: 1139 IYVPDLTCSLLSWIKLRSEGYHLYDNGIVMRLIRENITFLEAKFVGNL------------ 996
            +YV  L  +++S  KL  +G     +    +L+  N     A  + ++            
Sbjct: 206  LYVSTLEGNMISIGKLAEKGVRAVFDNTGCKLVYGNTVVAVADKLSDMYWLRIAQDRVMK 265

Query: 995  PVVTEYNQSTMHNAFVTYEFWHEALCHAAPASIA--KTGKLIQDINIIPDCPKEFHCEAC 822
             VV E+ ++  H        WH  L H  PA I   K   L+  + ++ DC   + CE C
Sbjct: 266  SVVKEHTKNCQHT-------WHHRLEHRDPAVIGEMKRRDLVSWLKVV-DCGIRWTCECC 317

Query: 821  ALAKSHHST-PKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFL 645
               K   S  P  +   + E  + IHSD+CGP+  ++L    YY++ +DD +RY+ + FL
Sbjct: 318  IECKMARSPFPPVAGKTSTEVLDIIHSDVCGPMEETTLGGCRYYMTLIDDHSRYTFVYFL 377

Query: 644  RNKSDAAMVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSP 465
            + KS+A   I  ++  ++ Q+G + +  RSD GGEY N  L  F A +GI  + T  YSP
Sbjct: 378  KKKSEAEDKIHEYVKLVQNQFGRKPRIIRSDQGGEYSNKALRKFCADEGIKMEFTAAYSP 437

Query: 464  ESNGVAERLNRSISEAIRAMLLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPYEAFH 288
            + NGVAER NRS++E  R ML      K  WAEA NT  Y +NRL   AV  +TP+E + 
Sbjct: 438  QQNGVAERKNRSLTEMGRCMLRDAGMHKRFWAEAVNTACYLQNRLPSAAVE-RTPFEIWF 496

Query: 287  GKKPSILNFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKRRI 108
            G+KP + N + F    YV IP   R    KL  +AE+  FVGY+   + YR+   +   I
Sbjct: 497  GRKPDLTNLRLFXCVGYVLIPSVKR---KKLDVKAERMTFVGYSGEHKAYRMLNTQTGEI 553

Query: 107  CVSADVEF 84
             +S DV F
Sbjct: 554  RISRDVRF 561



 Score = 35.8 bits (81), Expect(2) = 9e-48
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -2

Query: 1320 DTCATSHMCPHPERFVSLALQ-RGTVTSSSGQGMSVKGTGTIVLNCLLSNGSVVDFKI 1150
            D+ A+SH+C     F  +    R  VT + G    V+G G  ++ C + NG +++  +
Sbjct: 145  DSGASSHLCSDKSAFTVMEQSLRSNVTVADGSENRVEGVGDCLIKCAVENGEIIEITL 202


>emb|CAN72675.1| hypothetical protein VITISV_020405 [Vitis vinifera]
          Length = 1919

 Score =  197 bits (500), Expect = 2e-47
 Identities = 121/336 (36%), Positives = 176/336 (52%), Gaps = 9/336 (2%)
 Frame = -3

Query: 1139 IYVPDLTCSLLSWIKLRSEGYHLYDNGIVMRLIRENITFLEAKFVGNLPVVT---EYNQS 969
            +Y+PDL  +LLS  ++   GY +          +EN  F+      NL V++   + ++S
Sbjct: 850  LYIPDLDQNLLSVAQMLRNGYAVS--------FKENFCFIT-----NLKVMSFSAKIDES 896

Query: 968  TMHNAFVTYEFWHEALCHAAPASIAKTGKLIQDINIIPDCPK----EFHCEACALAKSHH 801
             +         WH+   H    S+    + +Q+  ++ D P+       CE+C L K   
Sbjct: 897  VV---------WHKRYGHFNLKSL----RFMQEAGMVEDMPEISVNAQTCESCELGKQQX 943

Query: 800  ST-PKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFLRNKSDAA 624
               P+    RA  +   IHSD+CGP+  +SLSN +Y+  F+DD  R   + FL+ KS   
Sbjct: 944  QPFPQNMSKRATHKLGLIHSDICGPMSTASLSNNVYFALFIDDLNRMIXVYFLKTKSQVL 1003

Query: 623  MVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSPESNGVAE 444
             V   F   +ETQ G   K  R+DNGGEY++ +   F  + GI+H LT PYSP+ NGV+E
Sbjct: 1004 SVFKRFKKMVETQSGQNVKVLRTDNGGEYISKEFNVFCQEAGIVHQLTTPYSPQRNGVSE 1063

Query: 443  RLNRSISEAIRAMLLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPYEAFHGKKPSIL 267
            R NR   E  R ML      K LWA+  NT +Y  NRL   +V  +TP EA+ G KP + 
Sbjct: 1064 RKNRXXMEMARCMLFEKKLPKLLWAKVVNTSVYLLNRLPTKSVQSKTPIEAWSGVKPFVK 1123

Query: 266  NFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGY 159
            + + F+  CY+H+P   R    KL +RAEKG+FVGY
Sbjct: 1124 HLKVFSSFCYLHVPSVKR---GKLDERAEKGVFVGY 1156


>emb|CAN69956.1| hypothetical protein VITISV_032883 [Vitis vinifera]
          Length = 811

 Score =  194 bits (493), Expect = 1e-46
 Identities = 130/394 (32%), Positives = 205/394 (52%), Gaps = 13/394 (3%)
 Frame = -3

Query: 1157 LKYLT-FIYVPDLTCSLLSWIKLRSEGYHLY--DNGIVMRLIRENITF---LEAK-FVGN 999
            LKY+T  +YVP++  +L S  +L  +G+ +   D   +++  +    F   + AK F  N
Sbjct: 43   LKYITDVLYVPNIDQNLFSVGQLIEKGFKVIFEDKWCMIKDAKGRDVFKVKMRAKSFALN 102

Query: 998  LPVVTEYNQSTMHNAFVTYEFWHEALCHAAPASIAKTGK--LIQDINIIPDCPKEFHCEA 825
            L    E  Q T  +     E WH  L H     +    K  L++ + ++ D  K   C A
Sbjct: 103  L---MEDEQMTFSSTVSNAELWHRRLGHFHHVGLLYMHKHNLVKGVPLLED--KLADCVA 157

Query: 824  CALAKSHHSTPKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFL 645
            C   K        + ++A  + + +H+D+ GP    SL+ + YY +F+ D TR   I FL
Sbjct: 158  CQYGKQTRRPFPQTTWKAMHKLQLVHTDVGGPQKTPSLNGSKYYNAFIGDYTRLCWIYFL 217

Query: 644  RNKSDAAMVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSP 465
            ++KS+ A +   +   +E Q  CR +  +S+NG EY N     F+ + GI H LT PY+P
Sbjct: 218  KSKSEVANIFWKYKAWVENQSNCRMQKIKSNNGKEYTNEIFDKFYVEAGIEHQLTTPYTP 277

Query: 464  ESNGVAERLNRSISEAIRAML----LPLNEKFLWAEAANTYIYTKNRLAHGAVNGQTPYE 297
            + NGV+ER NRSI E  R ML    LP   K LWAE ANT ++  NRL    +  +TP+E
Sbjct: 278  QQNGVSERKNRSIMEMTRCMLHEKELP---KKLWAETANTVVFLLNRLPTRVLQKKTPFE 334

Query: 296  AFHGKKPSILNFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREK 117
            A+ G KP + N + F   C+ ++P   R    KL ++A+ G+F+GY+ + + YRI+  + 
Sbjct: 335  AWFGYKPDLQNLRTFGCLCFSYVPQVKR---DKLDKKAKPGVFIGYSNSSEAYRIFQPQN 391

Query: 116  RRICVSADVEFKPFIASKLNADRTPPSSLPQLER 15
             +I VS DV+F      + N + +    LP++ R
Sbjct: 392  GKILVSKDVKFME--DRQWNCEESIKMQLPEVPR 423


>gb|AAD32906.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 822

 Score =  193 bits (490), Expect = 2e-46
 Identities = 112/295 (37%), Positives = 164/295 (55%), Gaps = 9/295 (3%)
 Frame = -3

Query: 941  EFWHEALCHAAPASIAKTGKLIQDINIIPDCPK----EFHCEACALAK-SHHSTPKPSKF 777
            E WH+ L H   +++    K++Q   ++   PK    E  CE+C L+K S    PK S+ 
Sbjct: 158  ELWHKRLGHTGHSNL----KILQSKEMVTGLPKFNVEEGKCESCILSKHSRDPFPKESET 213

Query: 776  RAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFLRNKSDAAMVIIGFITE 597
            RAK + E IHSD+CGP+  SS++ + Y ++F+DDATR   + FL+ KS+       F   
Sbjct: 214  RAKHKLELIHSDVCGPMQNSSINGSRYILTFIDDATRMVWVYFLKAKSEVFQTFKKFKNL 273

Query: 596  LETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSPESNGVAERLNRSISEA 417
            +E    CR K  R D G EY++ + + F    GI   LT  YSP+ N V+ER NRS+ E 
Sbjct: 274  VENNANCRIKKLRIDRGTEYLSKEFSEFLEGNGIERQLTAAYSPQQNEVSERRNRSLVEM 333

Query: 416  IRAML----LPLNEKFLWAEAANTYIYTKNRLAHGAVNGQTPYEAFHGKKPSILNFQPFA 249
             RAM+    LPL    LWAEA +   Y +NR     +  +TP EA+   KPS+ + + F 
Sbjct: 334  ARAMIKAKDLPLK---LWAEAVHVAAYAQNRTPTRTLKNKTPLEAWSDSKPSVSHMKVFG 390

Query: 248  RECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKRRICVSADVEF 84
              CYVHIP   R    K   ++++ IFVGY+   + YR+Y+ ++ +I +S DV F
Sbjct: 391  SICYVHIPDEKR---RKWDDKSKRAIFVGYSSQTKGYRVYLLKENKIDISRDVIF 442


>ref|XP_007030765.1| Uncharacterized protein TCM_026511 [Theobroma cacao]
            gi|508719370|gb|EOY11267.1| Uncharacterized protein
            TCM_026511 [Theobroma cacao]
          Length = 1318

 Score =  192 bits (487), Expect = 5e-46
 Identities = 111/288 (38%), Positives = 157/288 (54%), Gaps = 4/288 (1%)
 Frame = -3

Query: 935  WHEALCHAAPASIAKTGKL--IQDINIIPDCPKEFHCEACALAK-SHHSTPKPSKFRAKE 765
            WH  L H     I   G L  + D+ II +  K   CE C   K S H  PK S+ R   
Sbjct: 459  WHRRLGHINYQFIKNMGSLNLVNDMPIITEVEKT--CEVCLQGKQSRHPFPKQSQTRTAN 516

Query: 764  RGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFLRNKSDAAMVIIGFITELETQ 585
            R + IH+D+CGP+   SL+   Y+I F+DD +R+  I FL+ KS+A    + F   +E Q
Sbjct: 517  RLQLIHTDICGPIGTLSLNGNKYFILFIDDFSRFCWIFFLKQKSEAIQYFMKFKVLVEKQ 576

Query: 584  YGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSPESNGVAERLNRSISEAIRAM 405
               + K  RSDNG EY +N+      Q+GI   LT PYSP+ NGV+ER NR+I E IR +
Sbjct: 577  TDQKIKALRSDNGSEYTSNEFKALLTQEGIKQFLTVPYSPQQNGVSERKNRTIMEMIRCL 636

Query: 404  LLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPYEAFHGKKPSILNFQPFARECYVHI 228
            L      K+ WAEAAN  +  +N +   A+N  TP+E +HG KPSI N + F    Y  +
Sbjct: 637  LFEQQMPKYFWAEAANFAVTLQNLIPTTALNSMTPFEVWHGYKPSISNVKVFGCIAYAQV 696

Query: 227  PVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKRRICVSADVEF 84
            P   R   +KL  + +  I +GY+   + YR++  E +++ +S DV F
Sbjct: 697  PQQKR---TKLDSKTQISINLGYSSVSKGYRLFNVETKKVFISRDVVF 741


>ref|XP_003376336.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trichinella spiralis] gi|316974954|gb|EFV58419.1|
            retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Trichinella spiralis]
          Length = 1003

 Score =  192 bits (487), Expect = 5e-46
 Identities = 126/367 (34%), Positives = 191/367 (52%), Gaps = 16/367 (4%)
 Frame = -3

Query: 1136 YVPDLTCSLLSWIKLRSEGYHLYDNGIVMRLIRENITFLEAKFVGNLPVVTEYN------ 975
            + P+L  +LLS  ++ ++   L  +    R++   I       +G     T+YN      
Sbjct: 45   HAPELALNLLSVSRIAAQKKTLIFDENGCRIVDLAIEVPRQHILGT---ATQYNGLYRLN 101

Query: 974  -----QSTMHNAFVTYEFWHEALCHAAPASIAKTGKLIQD---INIIPDCPKEFHCEACA 819
                   T+H+     + WH  L H +  S+    KL+QD     I  D   +  C  C 
Sbjct: 102  RCDQWAMTVHDV---PDLWHRQLGHLSRGSM----KLLQDGQATGIPSDAITKTDCVTCL 154

Query: 818  LAKSHHST-PKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFLR 642
              K      PK +  R+KE  E +HSD+CGP+ V+S+  A Y++SF+DD +R S + FL+
Sbjct: 155  KGKQCRLPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSFIDDFSRKSFVYFLK 214

Query: 641  NKSDAAMVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSPE 462
            +K++       FI  +E Q   R K  R+DNG EYVNN    F  +KGI H+ T P +P+
Sbjct: 215  HKNEVLSKFKDFIAMVERQTSKRVKCLRTDNGREYVNNMFAEFLVRKGIRHERTIPETPQ 274

Query: 461  SNGVAERLNRSISEAIRAMLLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPYEAFHG 285
             NGVAER+NR++ E  R ML+  N    LWAEA  T  Y +NR    A+   TP EA+ G
Sbjct: 275  QNGVAERMNRTLVEKARTMLIDANLSPDLWAEAVGTANYLRNRCPTKALRKVTPEEAWSG 334

Query: 284  KKPSILNFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKRRIC 105
            +KP++ + + F     VH+P   R    K   ++E+ IFVGY +T + YR   R+ +++ 
Sbjct: 335  RKPNLAHLKVFGCLAMVHVPSGQR---KKWDLKSEERIFVGYCETSKGYRTVDRKTKKMY 391

Query: 104  VSADVEF 84
            V+ DV+F
Sbjct: 392  VTRDVKF 398


>ref|XP_003376808.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trichinella spiralis] gi|316974460|gb|EFV57947.1|
            retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Trichinella spiralis]
          Length = 1324

 Score =  192 bits (487), Expect = 5e-46
 Identities = 126/367 (34%), Positives = 191/367 (52%), Gaps = 16/367 (4%)
 Frame = -3

Query: 1136 YVPDLTCSLLSWIKLRSEGYHLYDNGIVMRLIRENITFLEAKFVGNLPVVTEYN------ 975
            + P+L  +LLS  ++ ++   L  +    R++   I       +G     T+YN      
Sbjct: 352  HAPELALNLLSVSRIAAQKKTLIFDENGCRIVDLAIEVPRQHILGT---ATQYNGLYRLN 408

Query: 974  -----QSTMHNAFVTYEFWHEALCHAAPASIAKTGKLIQD---INIIPDCPKEFHCEACA 819
                   T+H+     + WH  L H +  S+    KL+QD     I  D   +  C  C 
Sbjct: 409  RCDQWAMTVHDV---PDLWHRRLGHLSRGSM----KLLQDGQATGIPSDAITKTDCVTCL 461

Query: 818  LAKSHHST-PKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFLR 642
              K      PK +  R+KE  E +HSD+CGP+ V+S+  A Y++SF+DD +R S + FL+
Sbjct: 462  KGKQCRLPFPKSATKRSKEVLELVHSDICGPMQVASVGGARYFLSFIDDFSRKSFVYFLK 521

Query: 641  NKSDAAMVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSPE 462
            +K++       FI  +E Q   R K  R+DNG EYVNN    F  +KGI H+ T P +P+
Sbjct: 522  HKNEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVNNMFAEFLVRKGIRHERTIPETPQ 581

Query: 461  SNGVAERLNRSISEAIRAMLLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPYEAFHG 285
             NGVAER+NR++ E  R ML+  N    LWAEA  T  Y +NR    A+   TP EA+ G
Sbjct: 582  QNGVAERMNRTLVEKARTMLIDANLSPDLWAEAVGTANYLRNRCPTKALRKVTPEEAWSG 641

Query: 284  KKPSILNFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKRRIC 105
            +KP++ + + F     VH+P   R    K   ++E+ IFVGY +T + YR   R+ +++ 
Sbjct: 642  RKPNLAHLKVFGCLAMVHVPSGQR---KKWDPKSEERIFVGYCETSKGYRTVDRKTKKMY 698

Query: 104  VSADVEF 84
            V+ DV+F
Sbjct: 699  VTRDVKF 705


>ref|XP_007038256.1| Uncharacterized protein TCM_014834 [Theobroma cacao]
            gi|508775501|gb|EOY22757.1| Uncharacterized protein
            TCM_014834 [Theobroma cacao]
          Length = 996

 Score =  190 bits (483), Expect = 1e-45
 Identities = 100/250 (40%), Positives = 151/250 (60%), Gaps = 2/250 (0%)
 Frame = -3

Query: 827  ACALAK-SHHSTPKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQ 651
            +C   K +  S PK S  RAK R E +HSD+  P+   SL+ + Y++ F+DD +  + I 
Sbjct: 289  SCQYGKLTRRSFPKASLNRAKHRLELVHSDVARPMSEPSLNGSKYFVIFIDDMSIMTWIY 348

Query: 650  FLRNKSDAAMVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPY 471
            F+++KS+   +   F  ++E + GCR K  R+DNGGEY +++ T++   +GI H LT PY
Sbjct: 349  FIQHKSEVFSIFQKFKAKVENESGCRIKKLRTDNGGEYTSSEFTSYLENEGIHHQLTAPY 408

Query: 470  SPESNGVAERLNRSISEAIRAMLLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPYEA 294
             PE NGV+ER NR+I E  R +L      K  WA+AANT +Y +N L   AVN +TPYEA
Sbjct: 409  CPEQNGVSERKNRTIIEMSRCLLFENKLPKSFWAKAANTAVYLRNILITQAVNNETPYEA 468

Query: 293  FHGKKPSILNFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKR 114
            ++  +PS+ + + F   CY+H+P   R    KL  +A+ G+F+GY++  + YRIY  E  
Sbjct: 469  WYNTRPSVDHLRIFGSICYLHVPEELR---DKLQPKAKLGVFIGYSQQSKAYRIYQIESG 525

Query: 113  RICVSADVEF 84
            ++  S  V F
Sbjct: 526  KVFGSRHVTF 535


>ref|XP_969432.2| PREDICTED: similar to Copia protein (Gag-int-pol protein) [Tribolium
            castaneum]
          Length = 1360

 Score =  190 bits (482), Expect = 2e-45
 Identities = 118/360 (32%), Positives = 185/360 (51%), Gaps = 9/360 (2%)
 Frame = -3

Query: 1139 IYVPDLTCSLLSWIKLRSEGYHL-YDNGIVMRLIRENITFLEAKFVGNLPVVTEYNQS-- 969
            + VPDL  +L+S  K+   G+ + +     +    +   +L A  VG+L  +   +    
Sbjct: 344  LQVPDLRSNLMSVSKITDRGFEVCFSRNKAVITDSKGEVYLCADRVGDLYYIRGASNDAR 403

Query: 968  ---TMHNAF-VTYEFWHEALCHAAPASIAKTGKLIQDINIIPDCPKEFHCEACALAKSHH 801
               TM  +  V+ +  H  L H     +    +      +     ++F C  C   K   
Sbjct: 404  AACTMQKSQKVSTKLLHRRLGHPNMTYVTSAIRNGYLKGVEIKNREDFECSVCVKGKMAR 463

Query: 800  STPKPSKFRAKERG-EYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFLRNKSDAA 624
             TP P K   K    E IHSD+CGP+   SL  A YY+ F+DDATR+  ++FLRNKSD  
Sbjct: 464  -TPFPKKSNRKTSTLELIHSDVCGPMRTQSLGGAKYYVEFIDDATRWCEVRFLRNKSDVF 522

Query: 623  MVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSPESNGVAE 444
                 +I  +E Q G   K  +SDNG EY N +L  +  ++GI   LT PY+PE NGV+E
Sbjct: 523  KATADYINLIENQIGKSVKCLQSDNGTEYTNKELDEYLKKRGISRRLTAPYNPEQNGVSE 582

Query: 443  RLNRSISEAIRAMLLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPYEAFHGKKPSIL 267
            R +R++ +  R +L+        WAEA NT  Y +NRL   ++NG+TPYEA+ G+ P + 
Sbjct: 583  RKDRTLLDTARCLLMESKLPSSFWAEAVNTANYLRNRLPTKSLNGRTPYEAWTGRAPDLS 642

Query: 266  NFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKRRICVSADVE 87
            + + F    +    ++      K   RA++GIF+GY +  + +RI+  EKR++ ++ DV+
Sbjct: 643  HCKVFGARVFY---LNRERDRGKFDPRAQEGIFLGYAENSKAFRIWSPEKRKVFITQDVK 699


>gb|EFA07743.1| hypothetical protein TcasGA2_TC002223 [Tribolium castaneum]
          Length = 1384

 Score =  190 bits (482), Expect = 2e-45
 Identities = 118/360 (32%), Positives = 185/360 (51%), Gaps = 9/360 (2%)
 Frame = -3

Query: 1139 IYVPDLTCSLLSWIKLRSEGYHL-YDNGIVMRLIRENITFLEAKFVGNLPVVTEYNQS-- 969
            + VPDL  +L+S  K+   G+ + +     +    +   +L A  VG+L  +   +    
Sbjct: 344  LQVPDLRSNLMSVSKITDRGFEVCFSRNKAVITDSKGEVYLCADRVGDLYYIRGASNDAR 403

Query: 968  ---TMHNAF-VTYEFWHEALCHAAPASIAKTGKLIQDINIIPDCPKEFHCEACALAKSHH 801
               TM  +  V+ +  H  L H     +    +      +     ++F C  C   K   
Sbjct: 404  AACTMQKSQKVSTKLLHRRLGHPNMTYVTSAIRNGYLKGVEIKNREDFECSVCVKGKMAR 463

Query: 800  STPKPSKFRAKERG-EYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFLRNKSDAA 624
             TP P K   K    E IHSD+CGP+   SL  A YY+ F+DDATR+  ++FLRNKSD  
Sbjct: 464  -TPFPKKSNRKTSTLELIHSDVCGPMRTQSLGGAKYYVEFIDDATRWCEVRFLRNKSDVF 522

Query: 623  MVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSPESNGVAE 444
                 +I  +E Q G   K  +SDNG EY N +L  +  ++GI   LT PY+PE NGV+E
Sbjct: 523  KATADYINLIENQIGKSVKCLQSDNGTEYTNKELDEYLKKRGISRRLTAPYNPEQNGVSE 582

Query: 443  RLNRSISEAIRAMLLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPYEAFHGKKPSIL 267
            R +R++ +  R +L+        WAEA NT  Y +NRL   ++NG+TPYEA+ G+ P + 
Sbjct: 583  RKDRTLLDTARCLLMESKLPSSFWAEAVNTANYLRNRLPTKSLNGRTPYEAWTGRAPDLS 642

Query: 266  NFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKRRICVSADVE 87
            + + F    +    ++      K   RA++GIF+GY +  + +RI+  EKR++ ++ DV+
Sbjct: 643  HCKVFGARVFY---LNRERDRGKFDPRAQEGIFLGYAENSKAFRIWSPEKRKVFITQDVK 699


>emb|CAN71037.1| hypothetical protein VITISV_011061 [Vitis vinifera]
          Length = 1220

 Score =  190 bits (482), Expect = 2e-45
 Identities = 122/370 (32%), Positives = 185/370 (50%), Gaps = 18/370 (4%)
 Frame = -3

Query: 1139 IYVPDLTCSLLSWIKLRSEGY------------HLYDNGIVMRLIRENITFLEAKFVGNL 996
            +Y+PDL  +LLS  ++   GY            ++ +  I    +  NI +L+   V   
Sbjct: 365  LYIPDLDQNLLSVAQMLRNGYAVSFKENFCFITNVQEKEIAKIKMNGNIFYLKLDLVEGH 424

Query: 995  PVVTEYNQSTMHNAFVTYEFWHEALCHAAPASIAKTGKLIQDINIIPDCPK----EFHCE 828
                + ++S +         WH++  H    S+    + +Q+  ++ D  +       CE
Sbjct: 425  VFSAKIDESVV---------WHKSYGHFNLKSL----RFMQEAGMVEDMLEISVNAQTCE 471

Query: 827  ACALAKSHHST-PKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQ 651
            +C L K      P+    RA    E IHS +CGP+ ++SLSN +Y+  F+DD +R + + 
Sbjct: 472  SCELGKQQRQPFPQNMSKRATHELELIHSYICGPMSIASLSNNVYFALFIDDLSRMTWVY 531

Query: 650  FLRNKSDAAMVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPY 471
            FL+ KS    +   F   +ETQ G   K    DNGGEY++ +            +LT PY
Sbjct: 532  FLKTKSQVLSMFKSFKKMVETQSGQNVKVLIIDNGGEYISKEF-----------NLTAPY 580

Query: 470  SPESNGVAERLNRSISEAIRAMLLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPYEA 294
             P+ N V+ER N+++ E  R ML      K LWAEA NT +Y  NRL   +V  +TP EA
Sbjct: 581  LPQQNEVSERKNKTVMEMARCMLFEKRLPKLLWAEAVNTSVYLLNRLPTKSVQSKTPIEA 640

Query: 293  FHGKKPSILNFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKR 114
            + G KPS+ + + F   CY+H+P   R    KL +RAEKG+FVGY    + YRIY   + 
Sbjct: 641  WFGVKPSVKHLKVFGSLCYLHVPSVKR---GKLDERAEKGVFVGYAAESKGYRIYSLSRM 697

Query: 113  RICVSADVEF 84
            +I +S DV F
Sbjct: 698  KIVISRDVHF 707


>ref|XP_007014929.1| Uncharacterized protein TCM_040529 [Theobroma cacao]
            gi|508785292|gb|EOY32548.1| Uncharacterized protein
            TCM_040529 [Theobroma cacao]
          Length = 1266

 Score =  188 bits (478), Expect = 5e-45
 Identities = 109/288 (37%), Positives = 157/288 (54%), Gaps = 4/288 (1%)
 Frame = -3

Query: 935  WHEALCHAAPASIAKTGKL--IQDINIIPDCPKEFHCEACALAK-SHHSTPKPSKFRAKE 765
            WH  L H     I   G L  + D+ +I +  K   CE C   K S H  PK S+ RA  
Sbjct: 459  WHRRLGHINYQFIKNMGSLNLVNDMPVITEVEKT--CEVCLQGKQSRHPFPKQSQTRATN 516

Query: 764  RGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFLRNKSDAAMVIIGFITELETQ 585
            R + IH+D+CGP+   SL+   Y+I F+DD +R+  I FL+ KS+A    + F   +E Q
Sbjct: 517  RLQLIHTDICGPIGTLSLNGNKYFILFIDDFSRFCWIFFLKQKSEAIQYFMKFKVLVEKQ 576

Query: 584  YGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSPESNGVAERLNRSISEAIRAM 405
               + K  RSDNG EY +N+      Q+GI   LT  YSP+ NGV+ER NR+I E IR +
Sbjct: 577  TDQKIKALRSDNGSEYTSNEFKALLTQEGIKQFLTVTYSPQQNGVSERKNRTIMEMIRCL 636

Query: 404  LLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPYEAFHGKKPSILNFQPFARECYVHI 228
            L      K+ WAEAAN  +  +N +   A+N  TP+E +HG KPSI N + F    Y  +
Sbjct: 637  LFEQQMPKYFWAEAANFAVTLQNLIPTTALNSMTPFEVWHGYKPSISNVKVFGCIAYAQV 696

Query: 227  PVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKRRICVSADVEF 84
            P   R   +KL  + +  I +GY+   + YR++  + +++ +S DV F
Sbjct: 697  PQQKR---TKLDSKTQISINLGYSSVSKGYRLFNVKTKKVFISRDVVF 741


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  176 bits (447), Expect(2) = 9e-45
 Identities = 116/363 (31%), Positives = 180/363 (49%), Gaps = 12/363 (3%)
 Frame = -3

Query: 1136 YVPDLTCSLLSWIKLRSEGY--HLYDNGIVMRLIRENITFLEAKFVGNLPVVTEYNQSTM 963
            Y+P +  ++LS  +L  +GY   L DN + +R    N+   +     N   V        
Sbjct: 396  YIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNL-ITKVPMSKNRMFVLNIRNDIA 454

Query: 962  HNAFVTYE----FWHEALCHAAPASIAKTGKLIQDINIIPDCPKEFH----CEACALAKS 807
                + Y+     WH    H     +    +L+    ++   P   H    CE C L K 
Sbjct: 455  QCLKMCYKEESWLWHLRFGHLNFGGL----ELLSRKEMVRGLPCINHPNQVCEGCLLGKQ 510

Query: 806  HH-STPKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFLRNKSD 630
               S PK S  RA++  E IH+D+CGP+   SL  + Y++ F+DD +R + + FL+ KS+
Sbjct: 511  FKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSE 570

Query: 629  AAMVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSPESNGV 450
               +   F   +E + G   KT RSD GGE+ + +   +    GI   LT P SP+ NGV
Sbjct: 571  VFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGV 630

Query: 449  AERLNRSISEAIRAMLLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPYEAFHGKKPS 273
            AER NR+I E  R+ML      K LWAEA    +Y  NR    +V+G+TP EA+ G+KP 
Sbjct: 631  AERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPG 690

Query: 272  ILNFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKRRICVSAD 93
            + + + F    + H+P   R   SKL  ++EK IF+GY    + Y++Y  + ++  +S +
Sbjct: 691  VSHLRVFGSIAHAHVPDEKR---SKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRN 747

Query: 92   VEF 84
            + F
Sbjct: 748  IVF 750



 Score = 32.7 bits (73), Expect(2) = 9e-45
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -2

Query: 1329 FYFDTCATSHMCPHPERFVSL-ALQRGTVTSSSGQGMSVKGTGTIVLNCLLSNG 1171
            +Y D+ A++HMC     F  L    RG V       M VKG G I++   L NG
Sbjct: 335  WYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIR--LKNG 386


>emb|CAN59755.1| hypothetical protein VITISV_034567 [Vitis vinifera]
          Length = 1333

 Score =  187 bits (474), Expect = 2e-44
 Identities = 125/369 (33%), Positives = 191/369 (51%), Gaps = 17/369 (4%)
 Frame = -3

Query: 1139 IYVPDLTCSLLSWIKLRSEGYHLY--DNGIVMRLI--RE--NITFLEAKFVGNLP----- 993
            ++VPD+  +LLS  +L  +G+ +   D   +++    RE  NI      F  N+      
Sbjct: 307  LFVPDIDQNLLSVGQLVEKGFKVCFEDKNCIIKDAEGREVFNIKMKGKSFALNMLEDEQI 366

Query: 992  VVTEYNQSTMHNAFVTYEFWHEALCHAAPASIAKTGKLIQDINIIPDCPKEFH-CEACAL 816
               ++  +TM         WH+ L H    ++    K  Q +  +PD  +E   C AC  
Sbjct: 367  AAAQHENNTM--------LWHKRLGHFHHNAVLYXKKN-QIVEGLPDLEEELPICAACQY 417

Query: 815  AKSHHST-PKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFLRN 639
             K      P+   +++ ++ + +++D+ GP     L  + YYI+F+DD TR+  I FL  
Sbjct: 418  GKQTRLPFPQKXAWKSTQKLQLVYTDVSGPQKTPXLKXSKYYIAFIDDFTRFCWIYFLTY 477

Query: 638  KSDAAMVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSPES 459
            KS+ A V + +   +E Q   R K  RSDNG EY + K   F    GI H LT PY+P+ 
Sbjct: 478  KSEVADVFLRYKAMVENQSEYRIKVIRSDNGTEYTSEKFNKFCEDAGIDHQLTAPYTPQQ 537

Query: 458  NGVAERLNRSISEAIRAML----LPLNEKFLWAEAANTYIYTKNRLAHGAVNGQTPYEAF 291
            NGV ER NR+I E  R +L    LP   K  W EAAN  ++  NRL   A+  QTP+EA+
Sbjct: 538  NGVVERKNRTIMEMTRCLLHEKELP---KSFWVEAANIXVFLLNRLPTKALQKQTPFEAW 594

Query: 290  HGKKPSILNFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKRR 111
             G KP ++N + F   C+ ++P   +    KL +++E GIF+GY+ T   YRIY+ +  +
Sbjct: 595  FGYKPMLMNLKTFGCLCFSYVPQVKK---DKLDKKSEPGIFIGYSSTSXAYRIYLPQNNK 651

Query: 110  ICVSADVEF 84
            I VS DV+F
Sbjct: 652  IVVSRDVKF 660


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  175 bits (444), Expect(2) = 2e-44
 Identities = 118/388 (30%), Positives = 187/388 (48%), Gaps = 12/388 (3%)
 Frame = -3

Query: 1136 YVPDLTCSLLSWIKLRSEGY--HLYDNGIVMRLIRENITFLEAKFVGNLPVVTEYNQSTM 963
            Y+P +  ++LS  +L  +GY   L DN + +R    N+   +     N   V        
Sbjct: 396  YIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNL-ITKVPMSKNRMFVLNIRNDIA 454

Query: 962  HNAFVTYE----FWHEALCHAAPASIAKTGKLIQDINIIPDCPKEFH----CEACALAKS 807
                + Y+     WH    H     +    +L+    ++   P   H    CE C L K 
Sbjct: 455  QCLKMCYKEESWLWHLRFGHLNFGGL----ELLSRKEMVRGLPCINHPNQVCEGCLLGKQ 510

Query: 806  HH-STPKPSKFRAKERGEYIHSDLCGPLPVSSLSNALYYISFVDDATRYSNIQFLRNKSD 630
               S PK S  RA++  E IH+D+CGP+   SL  + Y++ F+DD +R + + FL+ KS+
Sbjct: 511  FKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSE 570

Query: 629  AAMVIIGFITELETQYGCRTKTFRSDNGGEYVNNKLTTFFAQKGIIHDLTPPYSPESNGV 450
               +   F   +E + G   KT RSD GGE+ + +   +    GI   LT P SP+ NGV
Sbjct: 571  VFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGV 630

Query: 449  AERLNRSISEAIRAMLLPLN-EKFLWAEAANTYIYTKNRLAHGAVNGQTPYEAFHGKKPS 273
             ER NR+I E  R+ML      K LWAEA    +Y  NR    +V+G+TP EA+ G+KP 
Sbjct: 631  VERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPG 690

Query: 272  ILNFQPFARECYVHIPVSNRPPGSKLLQRAEKGIFVGYTKTPQQYRIYVREKRRICVSAD 93
            + + + F    + H+P   R   SKL  ++EK IF+GY    + Y++Y  + ++  +S +
Sbjct: 691  VSHLRVFGSIAHAHVPDEKR---SKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRN 747

Query: 92   VEFKPFIASKLNADRTPPSSLPQLERNQ 9
            + F        N++    +  P  E ++
Sbjct: 748  IVFDEEGEWDWNSNEEDYNFFPHFEEDE 775



 Score = 32.7 bits (73), Expect(2) = 2e-44
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -2

Query: 1329 FYFDTCATSHMCPHPERFVSL-ALQRGTVTSSSGQGMSVKGTGTIVLNCLLSNG 1171
            +Y D+ A++HMC     F  L    RG V       M VKG G I++   L NG
Sbjct: 335  WYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIR--LKNG 386


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