BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00028663
         (457 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]   228   9e-58
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   191   9e-47
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]   189   3e-46
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   167   1e-39
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       167   1e-39
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   165   7e-39
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   161   1e-37
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]       160   1e-37
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   159   3e-37
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana...   159   3e-37
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   158   7e-37
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   157   1e-36
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu...   157   2e-36
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   154   9e-36
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...   154   9e-36
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   154   1e-35
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   154   2e-35
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   152   4e-35
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   150   1e-34
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      150   1e-34

>gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]
          Length = 1118

 Score =  228 bits (580), Expect = 9e-58
 Identities = 109/152 (71%), Positives = 128/152 (84%)
 Frame = +1

Query: 1   NPRTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQL 180
           NPRTY++ +EGVTLN+G Q S++ FSVLWKA+DV++KFG  LKNM LFL HESVEYRLQL
Sbjct: 27  NPRTYDNVVEGVTLNLGCQISEDEFSVLWKASDVSIKFGTGLKNMHLFLCHESVEYRLQL 86

Query: 181 YHDNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFT 360
           Y+DNIWQIVLYNSG  G+A +VLLIQLYGAPRI+KKL D  +SYF++TPDDQWVRTTDFT
Sbjct: 87  YYDNIWQIVLYNSG--GQAAQVLLIQLYGAPRIHKKLPDSVYSYFQQTPDDQWVRTTDFT 144

Query: 361 PSSSIGQSSGICLHLPPGTTLPNFADNFVNYE 456
           PSS IGQSSG+CL  P G  LP F  +FV Y+
Sbjct: 145 PSSCIGQSSGMCLQFPSGIKLPEFERHFVYYK 176


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  191 bits (485), Expect = 9e-47
 Identities = 96/152 (63%), Positives = 111/152 (73%)
 Frame = +1

Query: 1   NPRTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQL 180
           NPRT+  EME VTLN G Q S   FSVLWK   VTVKFG  +K M  FL H SVEY++QL
Sbjct: 88  NPRTFAHEMENVTLNFGCQISPHKFSVLWKGESVTVKFGTGMKKMHFFLRHNSVEYKMQL 147

Query: 181 YHDNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFT 360
            ++NIWQIVLYN  S G++ K+L+IQL+GAPRIYKKL    +SYF  T DDQWVRTTDFT
Sbjct: 148 SYENIWQIVLYN--SYGQSSKLLVIQLFGAPRIYKKLSGSVYSYFMVTQDDQWVRTTDFT 205

Query: 361 PSSSIGQSSGICLHLPPGTTLPNFADNFVNYE 456
             S IGQSS +CL LP G  LPNF DNF+ Y+
Sbjct: 206 -QSLIGQSSSLCLQLPYGMRLPNFRDNFLYYK 236


>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score =  189 bits (480), Expect = 3e-46
 Identities = 92/151 (60%), Positives = 119/151 (78%)
 Frame = +1

Query: 1   NPRTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQL 180
           N R++  E++G+TLN G Q SK+ FSVLW+AADV+VKFG+ L  M LF+  + VEYRLQL
Sbjct: 91  NHRSFMHELDGLTLNFGCQVSKDRFSVLWRAADVSVKFGSSLNKMHLFVCDDLVEYRLQL 150

Query: 181 YHDNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFT 360
            ++NIWQIVLYNS    +  ++LLIQL+GAPRIYKKL+   +S+++ETPDDQWVRTTDFT
Sbjct: 151 SYENIWQIVLYNSSV--QTERLLLIQLFGAPRIYKKLEYSVYSFYRETPDDQWVRTTDFT 208

Query: 361 PSSSIGQSSGICLHLPPGTTLPNFADNFVNY 453
           P S IGQSSG+CL LP    LP+F +NF++Y
Sbjct: 209 P-SCIGQSSGLCLQLPRHVKLPDFKNNFMHY 238


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  167 bits (423), Expect = 1e-39
 Identities = 88/151 (58%), Positives = 105/151 (69%)
 Frame = +1

Query: 4   PRTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLY 183
           PRT+   M+ +TL+ G Q S E F VLWKA +V+VKFG  L+    FLSH S EY+L+L 
Sbjct: 89  PRTFLHSMDRITLHFGYQMSNERFCVLWKAINVSVKFGFGLRKFYFFLSHGSEEYKLELS 148

Query: 184 HDNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFTP 363
            +NIWQI L     RG+  K LLIQL  AP+IY+K D  A SYFKETPDDQWVR  DFTP
Sbjct: 149 CENIWQIQLREP--RGQNTKFLLIQLLDAPQIYEK-DVSALSYFKETPDDQWVREIDFTP 205

Query: 364 SSSIGQSSGICLHLPPGTTLPNFADNFVNYE 456
           S SIGQSS +CL LP G+ LPNF +NF  Y+
Sbjct: 206 SCSIGQSSALCLELPHGSQLPNFCENFARYK 236


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  167 bits (423), Expect = 1e-39
 Identities = 84/151 (55%), Positives = 111/151 (73%)
 Frame = +1

Query: 4   PRTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLY 183
           PRTY + M+GVTLN G Q S + F+VL  + DV++KFG  LK +  FLSH S +Y+LQL 
Sbjct: 88  PRTYVEHMDGVTLNFGCQISDKKFAVLG-SKDVSIKFGIGLKKIYFFLSHASADYKLQLS 146

Query: 184 HDNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFTP 363
           ++NIWQ+VL+     G+  + LL+QL+GAPRIYK+L+D  +S+FKETPDDQWVRTTDFTP
Sbjct: 147 YENIWQVVLHRP--YGQNAQFLLLQLFGAPRIYKRLEDSCYSFFKETPDDQWVRTTDFTP 204

Query: 364 SSSIGQSSGICLHLPPGTTLPNFADNFVNYE 456
            S IG SS +CL    G  LPNF+++F  Y+
Sbjct: 205 -SWIGLSSSLCLEFRNGVQLPNFSESFFYYK 234


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  165 bits (417), Expect = 7e-39
 Identities = 85/159 (53%), Positives = 105/159 (66%), Gaps = 8/159 (5%)
 Frame = +1

Query: 4   PRTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLY 183
           PRT+   MEGVTL+ G Q S E F VLW+  DVTV FG  ++ +Q  LSH  VEYRL L+
Sbjct: 89  PRTFLHTMEGVTLHFGCQVSNEKFYVLWEEVDVTVNFGMGMRKLQFLLSHHCVEYRLDLF 148

Query: 184 HDNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKK--------LDDCAHSYFKETPDDQW 339
           ++NIWQI L+    R +  K LLIQL+GAPRIY+K         ++   +YF + PDDQW
Sbjct: 149 YENIWQIELHR--PRNQTSKYLLIQLFGAPRIYEKDVRSSGLVFENPLLNYFMDVPDDQW 206

Query: 340 VRTTDFTPSSSIGQSSGICLHLPPGTTLPNFADNFVNYE 456
           VRTTDFT SS IGQSS +CL LP    LPNF +NF  Y+
Sbjct: 207 VRTTDFTQSSCIGQSSVLCLELPYYLQLPNFRENFAYYK 245


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  161 bits (407), Expect = 1e-37
 Identities = 82/151 (54%), Positives = 102/151 (67%)
 Frame = +1

Query: 4   PRTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLY 183
           PR +   M+ +TL+ G Q S E F VLWKA +V+VKFG+ L+    FLSH S EY+L+L 
Sbjct: 90  PRAFLHSMDRITLHFGCQMSDERFCVLWKAINVSVKFGSGLRKFYFFLSHGSEEYKLELS 149

Query: 184 HDNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFTP 363
           ++NIWQI L +   RG+  K LLIQL GAP+IY+K       YFKE PDDQWVR  DFTP
Sbjct: 150 YENIWQIQLQHP--RGQITKFLLIQLLGAPQIYEKDVPVLSYYFKEAPDDQWVREIDFTP 207

Query: 364 SSSIGQSSGICLHLPPGTTLPNFADNFVNYE 456
           S  IGQS  +CL LP G+ LPNF +NF  Y+
Sbjct: 208 SCFIGQSFALCLELPYGSQLPNFRENFAYYK 238


>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
          Length = 479

 Score =  160 bits (406), Expect = 1e-37
 Identities = 82/151 (54%), Positives = 109/151 (72%)
 Frame = +1

Query: 4   PRTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLY 183
           PRTY   M+GVTLN G Q S + F+VL  + DV++KFG  LK +  FLS+ S +Y+LQL 
Sbjct: 88  PRTYVQHMDGVTLNFGCQISDKKFAVLG-SKDVSIKFGIGLKKIYFFLSYGSSDYKLQLS 146

Query: 184 HDNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFTP 363
           ++NIWQ+VL+     G+  + LL+QL+GAPRIYK+L++  +S+FKETPDDQWVRTTDFTP
Sbjct: 147 YENIWQVVLHRP--YGQKAQFLLLQLFGAPRIYKRLEESCYSFFKETPDDQWVRTTDFTP 204

Query: 364 SSSIGQSSGICLHLPPGTTLPNFADNFVNYE 456
            S IG SS +CL    G  LPNF ++F  Y+
Sbjct: 205 -SWIGLSSSLCLEFHNGIRLPNFRESFFYYK 234


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
           gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
           [Nicotiana glutinosa]
          Length = 1117

 Score =  159 bits (403), Expect = 3e-37
 Identities = 82/151 (54%), Positives = 107/151 (70%)
 Frame = +1

Query: 4   PRTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLY 183
           PRTY   M+GVTLN G Q S + F+VL     V++KFG  LK +  FLS+ S +Y+LQL 
Sbjct: 88  PRTYVQHMDGVTLNFGCQISDKKFAVLGSKV-VSIKFGIGLKKIYFFLSYGSTDYKLQLS 146

Query: 184 HDNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFTP 363
           ++NIWQ+VL+     G+  + LL+QL GAPRIYK+L+D  +S+FKETPDDQWVRTTDFTP
Sbjct: 147 YENIWQVVLHRP--YGQKAQFLLLQLSGAPRIYKRLEDSCYSFFKETPDDQWVRTTDFTP 204

Query: 364 SSSIGQSSGICLHLPPGTTLPNFADNFVNYE 456
            S IG SS +CL    G  LPNF+++F  Y+
Sbjct: 205 -SWIGLSSSLCLEFHNGVRLPNFSESFFYYK 234


>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
          Length = 1044

 Score =  159 bits (403), Expect = 3e-37
 Identities = 82/151 (54%), Positives = 109/151 (72%)
 Frame = +1

Query: 4   PRTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLY 183
           PRTY   M+GVTLN G Q S + F+VL  + DV++KFG  LK +  FLS+ S +Y+LQL 
Sbjct: 88  PRTYVQHMDGVTLNFGCQISDKKFAVLG-SKDVSIKFGIGLKKIYFFLSYGSTDYKLQLS 146

Query: 184 HDNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFTP 363
           ++NIWQ+VL+     G+  + LL+QL+GAPRI+K+L+D  +S+FKETPDDQWVRTTDFTP
Sbjct: 147 YENIWQVVLHCP--YGQKAQFLLLQLFGAPRIHKRLEDSCNSFFKETPDDQWVRTTDFTP 204

Query: 364 SSSIGQSSGICLHLPPGTTLPNFADNFVNYE 456
            S IG SS +CL    G  LPNF+ +F  Y+
Sbjct: 205 -SWIGLSSSLCLEFHNGVRLPNFSGSFFYYK 234


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
           gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
           family protein [Populus trichocarpa]
          Length = 1133

 Score =  158 bits (400), Expect = 7e-37
 Identities = 80/159 (50%), Positives = 103/159 (64%), Gaps = 8/159 (5%)
 Frame = +1

Query: 4   PRTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLY 183
           PR++   ME VTL+ G QTSKE FS +W   +V+V FG  ++ +  FLSH   EY+L L 
Sbjct: 90  PRSFLHTMESVTLHFGYQTSKEKFSAVWSGNNVSVNFGLGMRKLHFFLSHNLAEYKLNLL 149

Query: 184 HDNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKK--------LDDCAHSYFKETPDDQW 339
            +NIWQI L+    RG+  K LLIQLYGAPRIY++         +D   +YF++ PD+QW
Sbjct: 150 FENIWQIELHR--PRGQTVKYLLIQLYGAPRIYERDVPSSSNVFEDPLLNYFRDVPDEQW 207

Query: 340 VRTTDFTPSSSIGQSSGICLHLPPGTTLPNFADNFVNYE 456
           VRTTDFTPS  IG SS +CL LP    LPNF +NF  Y+
Sbjct: 208 VRTTDFTPSCGIGHSSSLCLELPNHLQLPNFNENFFYYK 246


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  157 bits (397), Expect = 1e-36
 Identities = 80/149 (53%), Positives = 107/149 (71%)
 Frame = +1

Query: 7   RTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLYH 186
           R Y D M+G+TLN G Q S++ F+VL  + +V++KFG  LK    FLS  S +Y+LQL +
Sbjct: 89  RAYVDHMDGITLNFGCQISEDKFAVLG-STEVSIKFGIGLKKFFFFLSSGSADYKLQLSY 147

Query: 187 DNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFTPS 366
           +NIWQ+VL+     G+  + LLIQL+GAPRIYK+L++  +S+FKETPDDQWVRTTDFTP 
Sbjct: 148 ENIWQVVLHRP--YGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDDQWVRTTDFTP- 204

Query: 367 SSIGQSSGICLHLPPGTTLPNFADNFVNY 453
           S IG SS +CL    G  LPNF ++F +Y
Sbjct: 205 SWIGLSSSLCLQFRRGVHLPNFQESFFHY 233


>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 935

 Score =  157 bits (396), Expect = 2e-36
 Identities = 80/147 (54%), Positives = 106/147 (72%)
 Frame = +1

Query: 13  YEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLYHDN 192
           Y D M+G+TLN G Q S + F+VL  + +V++KFG  LKN   FLS  S +Y+LQL ++N
Sbjct: 91  YVDHMDGITLNFGCQISDDKFAVLG-STEVSIKFGIGLKNFFFFLSSGSADYKLQLSYEN 149

Query: 193 IWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFTPSSS 372
           IWQ+VL+     G+  + LLIQL+GAPRIYK+L++  +S+FKETPDDQWVRTTDFTP S 
Sbjct: 150 IWQVVLHRP--YGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDDQWVRTTDFTP-SW 206

Query: 373 IGQSSGICLHLPPGTTLPNFADNFVNY 453
           IG SS +CL    G  LPNF ++F +Y
Sbjct: 207 IGLSSSLCLQFRRGVHLPNFQESFFHY 233


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  154 bits (390), Expect = 9e-36
 Identities = 79/149 (53%), Positives = 105/149 (70%)
 Frame = +1

Query: 7   RTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLYH 186
           R Y D M+G+TLN G Q S + F+VL  + +V++KFG  LK    FLS  S +Y+LQL +
Sbjct: 89  RAYVDHMDGITLNFGCQISDDKFAVLG-STEVSIKFGIGLKKFFFFLSSGSADYKLQLSY 147

Query: 187 DNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFTPS 366
           +NIWQ+VL+     G+  + LLIQL+GAPRIYK+L++  +S+FKETPDDQWVRTTDF P 
Sbjct: 148 ENIWQVVLHRP--YGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDDQWVRTTDFAP- 204

Query: 367 SSIGQSSGICLHLPPGTTLPNFADNFVNY 453
           S IG SS +CL    G  LPNF ++F +Y
Sbjct: 205 SWIGLSSSLCLQFRRGVHLPNFQESFFHY 233


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score =  154 bits (390), Expect = 9e-36
 Identities = 79/149 (53%), Positives = 105/149 (70%)
 Frame = +1

Query: 7   RTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLYH 186
           R Y D M+G+TLN G Q S + F+VL  + +V++KFG  LK    FLS  S +Y+LQL +
Sbjct: 89  RAYVDHMDGITLNFGCQISDDKFAVLG-STEVSIKFGIGLKKFFFFLSSGSADYKLQLSY 147

Query: 187 DNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFTPS 366
           +NIWQ+VL+     G+  + LLIQL+GAPRIYK+L++  +S+FKETPDDQWVRTTDF P 
Sbjct: 148 ENIWQVVLHRP--YGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDDQWVRTTDFAP- 204

Query: 367 SSIGQSSGICLHLPPGTTLPNFADNFVNY 453
           S IG SS +CL    G  LPNF ++F +Y
Sbjct: 205 SWIGLSSSLCLQFRRGVHLPNFQESFFHY 233


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  154 bits (389), Expect = 1e-35
 Identities = 78/147 (53%), Positives = 105/147 (71%)
 Frame = +1

Query: 13  YEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLYHDN 192
           Y D M+G+TLN G Q S + F+VL  + +V++KFG  LK +  FLS  S +Y+LQL ++N
Sbjct: 90  YVDHMDGITLNFGCQISDDKFAVLG-STEVSIKFGIGLKKIYFFLSRGSADYKLQLSYEN 148

Query: 193 IWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFTPSSS 372
           IWQ+VL+     G+  + LLIQL+GAPRIYK+L++  +S+FKETPDDQWVRTTDF P S 
Sbjct: 149 IWQVVLHRP--YGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDDQWVRTTDFAP-SW 205

Query: 373 IGQSSGICLHLPPGTTLPNFADNFVNY 453
           IG SS +CL    G  LPNF ++F +Y
Sbjct: 206 IGLSSSLCLQFRRGVHLPNFQESFFHY 232


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
           gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
           [Solanum lycopersicum]
          Length = 1114

 Score =  154 bits (388), Expect = 2e-35
 Identities = 78/149 (52%), Positives = 106/149 (71%)
 Frame = +1

Query: 7   RTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLYH 186
           R Y D+M+G+TLN G Q S + F+VL  + +V+++FG  LK    FLS  S +Y+LQL +
Sbjct: 89  RAYVDQMDGITLNFGCQISDDKFAVLG-STEVSIQFGIGLKKFFFFLSSGSADYKLQLSY 147

Query: 187 DNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFTPS 366
           +NIWQ+VL+     G+  + LLIQL+GAPRIYK+L++  +S+FKETPDDQWVRTTDF P 
Sbjct: 148 ENIWQVVLHRP--YGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDDQWVRTTDF-PP 204

Query: 367 SSIGQSSGICLHLPPGTTLPNFADNFVNY 453
           S IG SS +CL    G  LPNF ++F +Y
Sbjct: 205 SWIGLSSSLCLQFRRGVRLPNFEESFFHY 233


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
           tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
           tuberosum]
          Length = 1115

 Score =  152 bits (385), Expect = 4e-35
 Identities = 78/147 (53%), Positives = 104/147 (70%)
 Frame = +1

Query: 13  YEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLYHDN 192
           Y D M+G+TLN G Q S + F+VL  + +V++KFG  LK    FLS  S +Y+LQL ++N
Sbjct: 91  YVDHMDGITLNFGCQISDDKFAVLG-STEVSIKFGIGLKKFFFFLSSGSADYKLQLSYEN 149

Query: 193 IWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKKLDDCAHSYFKETPDDQWVRTTDFTPSSS 372
           IWQ+VL+     G+  + LLIQL+GAPRIYK+L++  +S+FKETPDDQWVRTTDF P S 
Sbjct: 150 IWQVVLHRP--YGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDDQWVRTTDFAP-SW 206

Query: 373 IGQSSGICLHLPPGTTLPNFADNFVNY 453
           IG SS +CL    G  LPNF ++F +Y
Sbjct: 207 IGLSSSLCLQFRRGVHLPNFQESFFHY 233


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
           max] gi|571439308|ref|XP_006574822.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
           max] gi|571439310|ref|XP_006574823.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
           max]
          Length = 1125

 Score =  150 bits (380), Expect = 1e-34
 Identities = 74/159 (46%), Positives = 99/159 (62%), Gaps = 8/159 (5%)
 Frame = +1

Query: 4   PRTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLY 183
           PR +   ++ V L+ G Q SK  FSVLWK  DV V FG+ ++ M    SH +V+Y+L+L 
Sbjct: 93  PRVFLHSLDDVKLSFGCQISKGRFSVLWKKQDVIVNFGSGMRKMHFLFSHNNVQYKLELS 152

Query: 184 HDNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKK--------LDDCAHSYFKETPDDQW 339
           ++NIW+I L+    R    + LLIQL GAPR+++          DD   ++FK+ PD+QW
Sbjct: 153 YENIWKIELHRP--RNETTRYLLIQLLGAPRVFENDVPTSTNIFDDPLFNFFKDAPDEQW 210

Query: 340 VRTTDFTPSSSIGQSSGICLHLPPGTTLPNFADNFVNYE 456
           +R  DFTP S IGQSS ICL LP G  LPNF +NF  YE
Sbjct: 211 IRAIDFTPESRIGQSSAICLELPNGRQLPNFRENFAYYE 249


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  150 bits (380), Expect = 1e-34
 Identities = 80/159 (50%), Positives = 105/159 (66%), Gaps = 8/159 (5%)
 Frame = +1

Query: 4   PRTYEDEMEGVTLNVGVQTSKENFSVLWKAADVTVKFGNKLKNMQLFLSHESVEYRLQLY 183
           PR +   ME VT+N G Q S+E F VLWKA +VT+ FG  ++ ++  LS+ S +Y+L+L+
Sbjct: 89  PRVFLHTMERVTVNFGCQVSEEKFYVLWKADNVTLNFGTGMRKLEFLLSYCSSKYKLELF 148

Query: 184 HDNIWQIVLYNSGSRGRAGKVLLIQLYGAPRIYKK--------LDDCAHSYFKETPDDQW 339
           ++NIWQI L    S  +  K LLIQL+GAPRIY+K         DD   +YFK+ PDDQW
Sbjct: 149 YENIWQIELRCPHS--QTSKHLLIQLFGAPRIYEKEVPASECVFDDPLLNYFKDMPDDQW 206

Query: 340 VRTTDFTPSSSIGQSSGICLHLPPGTTLPNFADNFVNYE 456
           VRTTDFT S+ IGQSS + L LP    LPNF +NF  Y+
Sbjct: 207 VRTTDFTRSNCIGQSSVLWLELPHNLQLPNFRENFAYYK 245