BLASTX nr result
ID: Mentha22_contig00025981
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00025981
(789 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus... 379 e-103
gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus... 375 e-101
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 331 2e-88
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 327 3e-87
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 327 3e-87
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 323 4e-86
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 322 1e-85
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 320 4e-85
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 320 4e-85
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 313 5e-83
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 312 8e-83
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 309 9e-82
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 309 9e-82
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 301 2e-79
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 296 4e-78
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 294 2e-77
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 294 2e-77
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 289 7e-76
tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family... 288 2e-75
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 287 3e-75
>gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus guttatus]
Length = 1109
Score = 379 bits (973), Expect = e-103
Identities = 196/263 (74%), Positives = 229/263 (87%), Gaps = 1/263 (0%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VAKSIKTSQ SRSASI++TLD +I GA L +DAY+VKESIL+T +MKL+ Q + +LD +
Sbjct: 838 VAKSIKTSQASRSASIVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQQVKVLDHR 897
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAK-KDPGQIKK 432
KLE+ ++ KK QF LHGLK+++SKVVVKGI+T+ER II+NEAK KDP KK
Sbjct: 898 KLEIVMHADKKKL------QFELHGLKNKISKVVVKGIDTVERAIILNEAKEKDPSANKK 951
Query: 431 LKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTI 252
+KLLVEGTGLL+VMG EGV+G TTSNHI+EVQ LGIEAARKKIIDEIQYTMSSHGMTI
Sbjct: 952 MKLLVEGTGLLSVMGIEGVEGRKTTSNHIIEVQHTLGIEAARKKIIDEIQYTMSSHGMTI 1011
Query: 251 DIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEG 72
DIRHMMLLADLMTFKGEVLGITRYGVQ+M+DSVLMLASFE+T+DHLFNA+ +G+VDKIEG
Sbjct: 1012 DIRHMMLLADLMTFKGEVLGITRYGVQKMKDSVLMLASFERTSDHLFNASAHGKVDKIEG 1071
Query: 71 VSECIIMGIPMQLGTGMLKVRQS 3
VSECIIMGIP+Q+GTGMLKVRQS
Sbjct: 1072 VSECIIMGIPVQIGTGMLKVRQS 1094
>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus]
Length = 1394
Score = 375 bits (963), Expect = e-101
Identities = 195/263 (74%), Positives = 226/263 (85%), Gaps = 1/263 (0%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VAKSIKTSQ SRS SI++TLD +I GA L +DAY+VKESIL+T +MKL+ Q + +LD +
Sbjct: 1123 VAKSIKTSQASRSTSIVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQQVKVLDHR 1182
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAK-KDPGQIKK 432
KLE+ + K QF LHGLK+++SKVVVKGI+T+ER II+NEAK KDP KK
Sbjct: 1183 KLEIVMQADKTKL------QFELHGLKNKISKVVVKGIDTVERAIILNEAKEKDPSANKK 1236
Query: 431 LKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTI 252
+KLLVEGTGLL+VMG EGV+G TTSNHI+EVQ LGIEAARKKIIDEIQYTMSSHGMTI
Sbjct: 1237 MKLLVEGTGLLSVMGIEGVEGRKTTSNHIIEVQHILGIEAARKKIIDEIQYTMSSHGMTI 1296
Query: 251 DIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEG 72
DIRHMMLLADLMT KGEVLGITRYGVQ+M+DSVLMLASFE+T+DHLFNA+VNGRVDKIEG
Sbjct: 1297 DIRHMMLLADLMTSKGEVLGITRYGVQKMKDSVLMLASFERTSDHLFNASVNGRVDKIEG 1356
Query: 71 VSECIIMGIPMQLGTGMLKVRQS 3
VSECIIMGIP+Q+GTGMLKVRQ+
Sbjct: 1357 VSECIIMGIPVQIGTGMLKVRQN 1379
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 331 bits (848), Expect = 2e-88
Identities = 176/262 (67%), Positives = 214/262 (81%), Gaps = 1/262 (0%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
+AKS+K S+ +R+ASI++ LD I A+L IDAY+VKESIL TPKMKL+ Q I +L+ Q
Sbjct: 1113 IAKSMKVSEMTRTASIVIKLDTKVIEAAQLFIDAYTVKESILLTPKMKLKEQQIRVLNRQ 1172
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAK-KDPGQIKK 432
KL V L ++SK FE L+++L VVVKGI +ER II++EA KDP Q KK
Sbjct: 1173 KLTVSLEA--ERSKLEFESW----ALQNKLKDVVVKGIKQVERAIIVDEANGKDPNQRKK 1226
Query: 431 LKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTI 252
LKL+VEGTG L+V+G +GVD NT SNHI+EV Q LGIE+AR++IIDEIQYTMS HGMTI
Sbjct: 1227 LKLVVEGTGFLSVLGIQGVDARNTKSNHIMEVFQVLGIESARRQIIDEIQYTMSGHGMTI 1286
Query: 251 DIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEG 72
DIRHMMLLADLMTFKGEVLGITRYGV++MRDSVLMLASFE+TADHLFNA VNGRVD+IEG
Sbjct: 1287 DIRHMMLLADLMTFKGEVLGITRYGVRKMRDSVLMLASFERTADHLFNAPVNGRVDRIEG 1346
Query: 71 VSECIIMGIPMQLGTGMLKVRQ 6
VSECI++GIPM+ GTGM+K++Q
Sbjct: 1347 VSECIMLGIPMRTGTGMMKIKQ 1368
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 327 bits (838), Expect = 3e-87
Identities = 178/266 (66%), Positives = 209/266 (78%), Gaps = 5/266 (1%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VAKSIK TSR ASI++ LD + I A LCI+A VKESI++TPK+KL+ QHI +LD +
Sbjct: 1127 VAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFR 1186
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAK-----KDPG 444
KLE+F PP KSK FE L+ LK+ L V+VKGI T+ERV+I + K K+ G
Sbjct: 1187 KLEIF--PPVDKSKIHFE----LYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENG 1240
Query: 443 QIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSH 264
+ KK +LLVEGTGL AVMG EG+DGC T SNHI EVQQ LGIEAAR IIDEI TM +H
Sbjct: 1241 EKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAH 1300
Query: 263 GMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVD 84
GM+ID RHMMLLADLMTF+GEVLGITR+G+Q+M SVLMLASFEKTADHLFNA+VNGR D
Sbjct: 1301 GMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDD 1360
Query: 83 KIEGVSECIIMGIPMQLGTGMLKVRQ 6
+IEGVSECIIMGIPM LGTG+LK+RQ
Sbjct: 1361 RIEGVSECIIMGIPMPLGTGILKIRQ 1386
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 327 bits (838), Expect = 3e-87
Identities = 178/266 (66%), Positives = 209/266 (78%), Gaps = 5/266 (1%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VAKSIK TSR ASI++ LD + I A LCI+A VKESI++TPK+KL+ QHI +LD +
Sbjct: 1120 VAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFR 1179
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAK-----KDPG 444
KLE+F PP KSK FE L+ LK+ L V+VKGI T+ERV+I + K K+ G
Sbjct: 1180 KLEIF--PPVDKSKIHFE----LYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENG 1233
Query: 443 QIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSH 264
+ KK +LLVEGTGL AVMG EG+DGC T SNHI EVQQ LGIEAAR IIDEI TM +H
Sbjct: 1234 EKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAH 1293
Query: 263 GMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVD 84
GM+ID RHMMLLADLMTF+GEVLGITR+G+Q+M SVLMLASFEKTADHLFNA+VNGR D
Sbjct: 1294 GMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDD 1353
Query: 83 KIEGVSECIIMGIPMQLGTGMLKVRQ 6
+IEGVSECIIMGIPM LGTG+LK+RQ
Sbjct: 1354 RIEGVSECIIMGIPMPLGTGILKIRQ 1379
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 323 bits (828), Expect = 4e-86
Identities = 173/261 (66%), Positives = 202/261 (77%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
+AK I+ +SRSA I + LD ++I A+L +DA VK++IL TPK+KL+ +HIN+LDD+
Sbjct: 1129 IAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDR 1188
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKDPGQIKKL 429
KL V D+ F LH LK+ L VVVKGI T+ R +I E K KK
Sbjct: 1189 KLRVLPQDADRNKLH-----FNLHFLKNMLPGVVVKGIKTVGRAVI-KEEKDKARNAKKF 1242
Query: 428 KLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTID 249
LLVEGTGL AVMGTEGVDGCNT SNHI+EVQQ LGIEAARK II+EI+YTM SHGM+ID
Sbjct: 1243 SLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSID 1302
Query: 248 IRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEGV 69
IRHMMLL DLMTF+GEVLGITR+G+Q+M SVLMLASFEKTADHLFNA+VNGR DKIEGV
Sbjct: 1303 IRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGV 1362
Query: 68 SECIIMGIPMQLGTGMLKVRQ 6
SEC+IMGIPM LGTGMLKVRQ
Sbjct: 1363 SECVIMGIPMPLGTGMLKVRQ 1383
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 322 bits (825), Expect = 1e-85
Identities = 173/261 (66%), Positives = 205/261 (78%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VAKSIKT TSR AS+++TLD +RI A L IDA V++SIL+TP++KL+ +HI +LD +
Sbjct: 906 VAKSIKTVMTSRVASVVITLDMERIQDALLSIDANVVRDSILQTPRIKLKKEHIRVLDFK 965
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKDPGQIKKL 429
KLE+ L +SK QF L L ++VKGI T+ER +I +E K KK
Sbjct: 966 KLEI-LPYESNRSKLYHHLQF----LAKMLQNILVKGIKTVERAVISSEKDKKTDISKKY 1020
Query: 428 KLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTID 249
KLLVEGTGLL VMGTEGVDG NT +NHI+EVQQ LGIEAAR IIDEI+YTM SHGM+ID
Sbjct: 1021 KLLVEGTGLLGVMGTEGVDGRNTKTNHIIEVQQTLGIEAARTCIIDEIEYTMKSHGMSID 1080
Query: 248 IRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEGV 69
RHMMLLAD+MT +GEVLGITR+G+Q+M SVLMLASFEKTADHLFNA+VNGR DKIEGV
Sbjct: 1081 TRHMMLLADVMTSRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGREDKIEGV 1140
Query: 68 SECIIMGIPMQLGTGMLKVRQ 6
SECIIMGIPMQ+GTGM+KVRQ
Sbjct: 1141 SECIIMGIPMQIGTGMIKVRQ 1161
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 320 bits (820), Expect = 4e-85
Identities = 174/264 (65%), Positives = 206/264 (78%), Gaps = 3/264 (1%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VAKS+K SR ASI ++LD + I ++LCIDAY+VK+SIL+T K+KL+ I +L+ +
Sbjct: 1116 VAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPR 1175
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKDPGQIKK- 432
KLEVF P K K FE LH LK++L VVVKGI T++R ++ E +KD K
Sbjct: 1176 KLEVF--PQANKDKLHFE----LHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKG 1229
Query: 431 --LKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGM 258
+LLVEGTGLLAVMG EGVDG T SNHI+EVQ LGIEAAR IIDEI YTMSSHGM
Sbjct: 1230 ETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDEINYTMSSHGM 1289
Query: 257 TIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKI 78
TID+RHMMLLADLMT+KGEVLGITR+GVQ+M+DSVLMLASFEKT DHLFNA+VNGR DKI
Sbjct: 1290 TIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKI 1349
Query: 77 EGVSECIIMGIPMQLGTGMLKVRQ 6
EGV+ECIIMGIPM +GTGM K+RQ
Sbjct: 1350 EGVTECIIMGIPMTIGTGMFKLRQ 1373
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 320 bits (820), Expect = 4e-85
Identities = 174/264 (65%), Positives = 206/264 (78%), Gaps = 3/264 (1%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VAKS+K SR ASI ++LD + I ++LCIDAY+VK+SIL+T K+KL+ I +L+ +
Sbjct: 1116 VAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPR 1175
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKDPGQIKK- 432
KLEVF P K K FE LH LK++L VVVKGI T++R ++ E +KD K
Sbjct: 1176 KLEVF--PQANKDKLHFE----LHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKG 1229
Query: 431 --LKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGM 258
+LLVEGTGLLAVMG EGVDG T SNHI+EVQ LGIEAAR IIDEI YTMSSHGM
Sbjct: 1230 ETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEINYTMSSHGM 1289
Query: 257 TIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKI 78
TID+RHMMLLADLMT+KGEVLGITR+GVQ+M+DSVLMLASFEKT DHLFNA+VNGR DKI
Sbjct: 1290 TIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKI 1349
Query: 77 EGVSECIIMGIPMQLGTGMLKVRQ 6
EGV+ECIIMGIPM +GTGM K+RQ
Sbjct: 1350 EGVTECIIMGIPMTIGTGMFKLRQ 1373
>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
[Theobroma cacao]
Length = 1395
Score = 313 bits (802), Expect = 5e-83
Identities = 171/266 (64%), Positives = 207/266 (77%), Gaps = 5/266 (1%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VAKSIK TSRSAS+++TLD + I A+L IDA VKESIL+TPK+KL+ QH+ +LD +
Sbjct: 1119 VAKSIKIVITSRSASVVITLDMEIILDAELYIDANIVKESILQTPKIKLKEQHVKVLDGR 1178
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKDPGQ---- 441
KLEV PP +S+ FE LH LK+ L VVVKGI T+ER ++ ++ K+ Q
Sbjct: 1179 KLEVV--PPADRSQIHFE----LHSLKNLLPLVVVKGIKTVERTVVYDKNKEKKNQKEEE 1232
Query: 440 -IKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSH 264
K +LLVEGTGL AVMG EG+DG T SNH++E++Q LGIEAARK IIDEI TM H
Sbjct: 1233 TTKHFQLLVEGTGLQAVMGIEGIDGRRTWSNHVMEMEQILGIEAARKCIIDEIAQTMEHH 1292
Query: 263 GMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVD 84
GMTID RHMMLLAD+MTF+GEVLGITR+G+Q+M S+LMLASFE+TADHLFNAAVNGR D
Sbjct: 1293 GMTIDRRHMMLLADVMTFRGEVLGITRFGIQKMDKSILMLASFERTADHLFNAAVNGRDD 1352
Query: 83 KIEGVSECIIMGIPMQLGTGMLKVRQ 6
KIEGV+ECIIMGIPMQ+GTG+LKV Q
Sbjct: 1353 KIEGVTECIIMGIPMQIGTGILKVIQ 1378
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 312 bits (800), Expect = 8e-83
Identities = 167/264 (63%), Positives = 204/264 (77%), Gaps = 3/264 (1%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VAKSIK TSRSAS+++TLD I A+L +DA VKE+ILRTP++KL+ QHI +LD +
Sbjct: 1109 VAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRTPRIKLKPQHIKVLDTR 1168
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIII---NEAKKDPGQI 438
KLEV P + + FE LH LK+ L ++V+GI T+ER +I ++ K + ++
Sbjct: 1169 KLEVI--PLGDRERVHFE----LHNLKNLLPSIIVQGIKTVERAVIAQKKHDGKANDQEL 1222
Query: 437 KKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGM 258
+LVEG GL VMGTEGVDGC TTSNH++EVQ+ LGIEAARK IIDEI TM HGM
Sbjct: 1223 PTYNMLVEGMGLDLVMGTEGVDGCKTTSNHVMEVQKFLGIEAARKCIIDEINQTMEHHGM 1282
Query: 257 TIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKI 78
+IDIRHMMLL DLMTFKGEVLGITR+G+Q+M SVLMLASFEKTADHL++AAV GR DKI
Sbjct: 1283 SIDIRHMMLLGDLMTFKGEVLGITRFGIQKMDKSVLMLASFEKTADHLYHAAVFGRDDKI 1342
Query: 77 EGVSECIIMGIPMQLGTGMLKVRQ 6
EGVSECIIMGIPMQ+GTG+LKV+Q
Sbjct: 1343 EGVSECIIMGIPMQIGTGILKVQQ 1366
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 309 bits (791), Expect = 9e-82
Identities = 175/261 (67%), Positives = 201/261 (77%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VAKSIK TSR A I V LD + I ++L ID+ V+ESILR ++KL+ QHI +LD
Sbjct: 1554 VAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAG 1613
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKDPGQIKKL 429
KLEV +P +S FE LH LK+ L VVVKGI T+ER +I + K K
Sbjct: 1614 KLEV--HPQGDRSTIHFE----LHALKNLLPTVVVKGIETVERAVINKDNKV------KY 1661
Query: 428 KLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTID 249
LLVEGTGL VMGTEGV G TTSNHI+EVQQ LGIEAARK II+EIQYTM+SHGM+ID
Sbjct: 1662 NLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSID 1721
Query: 248 IRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEGV 69
IRHMMLLADLMTF+GEVLGITR+G+Q+M SVLMLASFEKTADHLFNA+V+GR DKIEGV
Sbjct: 1722 IRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGV 1781
Query: 68 SECIIMGIPMQLGTGMLKVRQ 6
SECIIMGIPMQLGTG+LKVRQ
Sbjct: 1782 SECIIMGIPMQLGTGILKVRQ 1802
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 309 bits (791), Expect = 9e-82
Identities = 175/261 (67%), Positives = 201/261 (77%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VAKSIK TSR A I V LD + I ++L ID+ V+ESILR ++KL+ QHI +LD
Sbjct: 1118 VAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAG 1177
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKDPGQIKKL 429
KLEV +P +S FE LH LK+ L VVVKGI T+ER +I + K K
Sbjct: 1178 KLEV--HPQGDRSTIHFE----LHALKNLLPTVVVKGIETVERAVINKDNKV------KY 1225
Query: 428 KLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTID 249
LLVEGTGL VMGTEGV G TTSNHI+EVQQ LGIEAARK II+EIQYTM+SHGM+ID
Sbjct: 1226 NLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSID 1285
Query: 248 IRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEGV 69
IRHMMLLADLMTF+GEVLGITR+G+Q+M SVLMLASFEKTADHLFNA+V+GR DKIEGV
Sbjct: 1286 IRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGV 1345
Query: 68 SECIIMGIPMQLGTGMLKVRQ 6
SECIIMGIPMQLGTG+LKVRQ
Sbjct: 1346 SECIIMGIPMQLGTGILKVRQ 1366
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 301 bits (770), Expect = 2e-79
Identities = 168/265 (63%), Positives = 203/265 (76%), Gaps = 4/265 (1%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VAKSIK TSRSAS+ VTLD I A+L +DA V+E IL TPK+K + Q IN+L+D
Sbjct: 1136 VAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVRELILETPKIKRKLQRINVLEDG 1195
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVII----INEAKKDPGQ 441
KLEVF P ++K FE LH LK+ L VVVKGI T+ERV+I +++A+ D G
Sbjct: 1196 KLEVF--PGGDRNKLHFE----LHSLKNMLPAVVVKGIKTVERVVIAQKKLDDAENDQGG 1249
Query: 440 IKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHG 261
K + VEG GL AVMGTEGVDG T SNHI+EVQ+ LGIEAARK IIDEI+ TM SHG
Sbjct: 1250 -PKYNMFVEGMGLQAVMGTEGVDGRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESHG 1308
Query: 260 MTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDK 81
M+IDIRHMMLLAD+MT +G VLGITR+G+Q+M SVLMLASFEKT+DHLFNA+V G+ DK
Sbjct: 1309 MSIDIRHMMLLADVMTSRGVVLGITRFGIQKMDKSVLMLASFEKTSDHLFNASVKGKDDK 1368
Query: 80 IEGVSECIIMGIPMQLGTGMLKVRQ 6
IEGVSECIIMGIP+ +GTG+LK++Q
Sbjct: 1369 IEGVSECIIMGIPVAIGTGVLKIQQ 1393
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 296 bits (759), Expect = 4e-78
Identities = 157/261 (60%), Positives = 195/261 (74%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VA +IK S +++V LD I + I A SV+ SIL PK+KL+++H+ ++D
Sbjct: 1127 VASAIKIVLKSSQPNLVVKLDMQLIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDRA 1186
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKDPGQIKKL 429
KL ++ DK Q LH LK+ L KV+VKGI T+ERV+I + +K G+++K
Sbjct: 1187 KLRIYPAGTDKSKL-----QLELHNLKAMLPKVIVKGIPTVERVVI--DERKKEGKLEKY 1239
Query: 428 KLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTID 249
LLVEGT LLAVMGT GVD NT SNHI+E+ LGIEAAR+ IIDEIQYTM SHGM ID
Sbjct: 1240 NLLVEGTNLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNID 1299
Query: 248 IRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEGV 69
+RHMMLLADLMT+KGEVLGITRYG+ +M+ SVLMLASFEKT++HLFNA+ +GR D+IEGV
Sbjct: 1300 VRHMMLLADLMTYKGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGV 1359
Query: 68 SECIIMGIPMQLGTGMLKVRQ 6
SECIIMGIPMQLGTG+LKVRQ
Sbjct: 1360 SECIIMGIPMQLGTGILKVRQ 1380
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 294 bits (753), Expect = 2e-77
Identities = 159/261 (60%), Positives = 197/261 (75%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VA++IK S +++V LD RI + I A SV+ SIL PK+KL+++H+ ++D
Sbjct: 1052 VAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKS 1111
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKDPGQIKKL 429
KL ++ DK SK ++E LH LKS L KV+VKGI T+ER +I +++ K+
Sbjct: 1112 KLRIYPAGIDK-SKLLYE----LHHLKSMLPKVIVKGIPTVERAVISETGEEND---KRY 1163
Query: 428 KLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTID 249
KLLVEGT LLAVMGT GVD T SNHI+EV + LGIEAAR+ IIDEIQYTM SHGM ID
Sbjct: 1164 KLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNID 1223
Query: 248 IRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEGV 69
RHMMLLADLMT+KGE+LGITRYG+ +M+ SVLMLASFEKTA+HLFNA+ +GR D+IEGV
Sbjct: 1224 SRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGV 1283
Query: 68 SECIIMGIPMQLGTGMLKVRQ 6
SECIIMGIPMQLGTG+LKVRQ
Sbjct: 1284 SECIIMGIPMQLGTGILKVRQ 1304
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 294 bits (753), Expect = 2e-77
Identities = 159/261 (60%), Positives = 197/261 (75%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VA++IK S +++V LD RI + I A SV+ SIL PK+KL+++H+ ++D
Sbjct: 1114 VAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKS 1173
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKDPGQIKKL 429
KL ++ DK SK ++E LH LKS L KV+VKGI T+ER +I +++ K+
Sbjct: 1174 KLRIYPAGIDK-SKLLYE----LHHLKSMLPKVIVKGIPTVERAVISETGEEND---KRY 1225
Query: 428 KLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTID 249
KLLVEGT LLAVMGT GVD T SNHI+EV + LGIEAAR+ IIDEIQYTM SHGM ID
Sbjct: 1226 KLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNID 1285
Query: 248 IRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEGV 69
RHMMLLADLMT+KGE+LGITRYG+ +M+ SVLMLASFEKTA+HLFNA+ +GR D+IEGV
Sbjct: 1286 SRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGV 1345
Query: 68 SECIIMGIPMQLGTGMLKVRQ 6
SECIIMGIPMQLGTG+LKVRQ
Sbjct: 1346 SECIIMGIPMQLGTGILKVRQ 1366
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 289 bits (740), Expect = 7e-76
Identities = 158/261 (60%), Positives = 192/261 (73%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VA+ IK S +++V LD RI + I A SV+ SIL P++KL+++H+ ++D
Sbjct: 1124 VAEDIKIVLKSSQPNLVVKLDMQRIEDLHMGISADSVQLSILNHPRIKLKSEHVRVIDKA 1183
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKDPGQIKKL 429
KL V+ DK SK ++E LH LKS L KV+VKGI T+ER +I K
Sbjct: 1184 KLRVYPTAIDK-SKLLYE----LHNLKSMLPKVIVKGIPTVERAVISQTGDK-------Y 1231
Query: 428 KLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTID 249
LLVEGT LLAVMGT GVD T SNHI+EV + LGIEAAR+ IIDEIQYTM+SHGM ID
Sbjct: 1232 SLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMNID 1291
Query: 248 IRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEGV 69
RHMMLLADLMT+KGE+LGITRYG+ +M+ SVLMLASFEKTA+HLFNA+ +GR D+IEGV
Sbjct: 1292 SRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGV 1351
Query: 68 SECIIMGIPMQLGTGMLKVRQ 6
SECIIMGIPMQLGTG+LKVRQ
Sbjct: 1352 SECIIMGIPMQLGTGILKVRQ 1372
>tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 336
Score = 288 bits (737), Expect = 2e-75
Identities = 157/261 (60%), Positives = 192/261 (73%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VA +I+T S +++V LD I + I A SVK SIL PK+KL+++H+ ++D
Sbjct: 66 VAATIQTVLKSSLPNLVVKLDMQLIETLHMGISADSVKLSILNHPKLKLKSEHVRVIDRA 125
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKDPGQIKKL 429
KL ++ DK + Q LH LKS L KV+VKGI T+ERV+I + K ++
Sbjct: 126 KLRIYPAGTDK-----LKLQLELHNLKSILPKVIVKGIPTVERVVI--DEVKVNNATERY 178
Query: 428 KLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTID 249
+LLVEGT LLAVMGT GVD T SNHI+E Q LGIEAAR+ IIDEIQYTM SHGM ID
Sbjct: 179 QLLVEGTNLLAVMGTPGVDARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNID 238
Query: 248 IRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEGV 69
RHMMLLADLMT+KGE+LGITRYG+ +M+ SVLMLASFEKTA+HLFNA+ +GR D+IEGV
Sbjct: 239 RRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGV 298
Query: 68 SECIIMGIPMQLGTGMLKVRQ 6
SECIIMGIPMQLGTG+LKVRQ
Sbjct: 299 SECIIMGIPMQLGTGILKVRQ 319
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 287 bits (735), Expect = 3e-75
Identities = 154/261 (59%), Positives = 192/261 (73%)
Frame = -2
Query: 788 VAKSIKTSQTSRSASILVTLDKDRINGAKLCIDAYSVKESILRTPKMKLQAQHINILDDQ 609
VA +I+ S +++V LD I + I A SV+ SIL PK+KL+++H+ ++D
Sbjct: 1121 VAVAIQIVLKSSQPNLIVKLDMQLIESLHMGISADSVQLSILNHPKIKLKSEHVRVIDRA 1180
Query: 608 KLEVFLNPPDKKSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKDPGQIKKL 429
KL ++ DK+ Q LH LKS L KV+VKGI T+ERV+I + K + ++
Sbjct: 1181 KLRIYPAGTDKRKL-----QLELHNLKSILPKVIVKGIPTVERVVI--DEVKVKNETERY 1233
Query: 428 KLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTID 249
+LLVEGT LLAVMGT GVD T SNHI+E Q LGIEAAR+ IIDEIQYTM SHGM ID
Sbjct: 1234 QLLVEGTNLLAVMGTPGVDATKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNID 1293
Query: 248 IRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEGV 69
RHMMLLADLMT+KGE+LGITRYG+ +M+ SVLMLASFEKT++HLFNA+ +GR D+IEGV
Sbjct: 1294 RRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIEGV 1353
Query: 68 SECIIMGIPMQLGTGMLKVRQ 6
SECIIMGIPMQLGTG+LKVRQ
Sbjct: 1354 SECIIMGIPMQLGTGILKVRQ 1374