BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00024830
         (1356 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]   715   0.0  
gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus...   652   0.0  
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   599   e-168
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   597   e-168
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...   597   e-168
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     596   e-168
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    595   e-167
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     594   e-167
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]       592   e-166
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    590   e-166
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   588   e-165
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   588   e-165
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   587   e-165
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   585   e-164
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   584   e-164
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   584   e-164
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   584   e-164
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   584   e-164
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   582   e-163
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   580   e-163

>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
          Length = 1195

 Score =  715 bits (1845), Expect = 0.0
 Identities = 343/389 (88%), Positives = 366/389 (94%)
 Frame = -1

Query: 1356 VLEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAV 1177
            VLEYGQCFIQVS PSLEDCFA HGSEFS+TKK+LEVIKGLVVIAKNPCLHPGDVRILEAV
Sbjct: 774  VLEYGQCFIQVSKPSLEDCFANHGSEFSETKKDLEVIKGLVVIAKNPCLHPGDVRILEAV 833

Query: 1176 DVPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPG 997
            DV GL HL+DCL+FPQKGERPH NEASGSDLDGDLYFVTWDD LIPPSK+SW PMDYEPG
Sbjct: 834  DVRGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDDTLIPPSKRSWLPMDYEPG 893

Query: 996  EVKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIA 817
            EVK KPR VTHSDIIEFFTKNMVNESLGTICNAHVVHAD S+YGALDEKCIKLAELAAIA
Sbjct: 894  EVKLKPREVTHSDIIEFFTKNMVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIA 953

Query: 816  VDFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQL 637
            VDFPKTGKIV+MPP+LKP++YPDFMGKEELQSYKSTKILGKLYRR+RDAYN DYE S QL
Sbjct: 954  VDFPKTGKIVTMPPDLKPQMYPDFMGKEELQSYKSTKILGKLYRRVRDAYNLDYEASSQL 1013

Query: 636  TYPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMP 457
            TYP++ I YD+ELE+TGS+DFIADAWSCKCSYDGQL GLLGQYKVNSEDEVVTGHIWSMP
Sbjct: 1014 TYPAD-ISYDQELEVTGSKDFIADAWSCKCSYDGQLAGLLGQYKVNSEDEVVTGHIWSMP 1072

Query: 456  KSSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSY 277
            K SSKKQGELKERLKHAY+ALRKDYRKVFECM P FDQL DHEKNV YEQKASAWYQV+Y
Sbjct: 1073 KFSSKKQGELKERLKHAYNALRKDYRKVFECMAPGFDQLPDHEKNVLYEQKASAWYQVTY 1132

Query: 276  HESWVEKSKELQKVDDPGKTVLLSFAWIA 190
             ++WV+KSKELQ++DD GKTVLLSFAWIA
Sbjct: 1133 QDNWVKKSKELQELDDSGKTVLLSFAWIA 1161


>gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus guttatus]
          Length = 1196

 Score =  652 bits (1682), Expect = 0.0
 Identities = 317/390 (81%), Positives = 348/390 (89%), Gaps = 1/390 (0%)
 Frame = -1

Query: 1356 VLEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAV 1177
            VLE+GQCFIQVS PSLEDCF KHGSEFS  KK LEVIKGLV IAKNPCLHPGDVRILEAV
Sbjct: 776  VLEHGQCFIQVSNPSLEDCFVKHGSEFSGAKKKLEVIKGLVAIAKNPCLHPGDVRILEAV 835

Query: 1176 DVPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPG 997
            D PGL HL+DCL+FPQKGERPH NEASGSDLDGDLYFVTWD+NL+PPSK+SW PM+Y PG
Sbjct: 836  DCPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLMPPSKRSWTPMEYAPG 895

Query: 996  EVKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIA 817
            EVK+ PR V H+DIIEFFTKNMVNESLG ICNAHVVHAD+S+YGALDEKCIKLAELAAIA
Sbjct: 896  EVKQLPREVKHTDIIEFFTKNMVNESLGAICNAHVVHADSSEYGALDEKCIKLAELAAIA 955

Query: 816  VDFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQL 637
            VDFPKTGKIV+MP ELKPKLYPDFMGK+E Q+YKS+KILGKLYR+I+D+ N DYE S + 
Sbjct: 956  VDFPKTGKIVTMPAELKPKLYPDFMGKDEFQTYKSSKILGKLYRKIKDS-NYDYEESSEN 1014

Query: 636  TYPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMP 457
            T  S NI YD+ELEI GS  FI DAW+CKCSYDGQL GLLGQYKVNSE+EVVTGHIWSMP
Sbjct: 1015 T--SVNIAYDQELEIAGSESFITDAWNCKCSYDGQLTGLLGQYKVNSEEEVVTGHIWSMP 1072

Query: 456  KSSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSY 277
            K SSKKQGELKERLKHAYS LRKD+RKVFE M  +FDQLSD EKN  +E+KASAWYQV+Y
Sbjct: 1073 KYSSKKQGELKERLKHAYSTLRKDFRKVFESMDAEFDQLSDDEKNTMFERKASAWYQVTY 1132

Query: 276  HESWVEKSKELQKVDDP-GKTVLLSFAWIA 190
            +ESWV+KSK+LQ VDD  GKTV+LSFAWIA
Sbjct: 1133 NESWVKKSKDLQVVDDEVGKTVMLSFAWIA 1162


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  599 bits (1544), Expect = e-168
 Identities = 288/388 (74%), Positives = 327/388 (84%)
 Frame = -1

Query: 1353 LEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAVD 1174
            LE GQCFIQVS+PSLE+CF KHG +FS  KKNL+V+KGLVVIAKNPCLHPGDVRILEAVD
Sbjct: 776  LEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 1173 VPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGE 994
            VPGL HL+DCL+FPQKG+RPH NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM+YEP E
Sbjct: 836  VPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAE 895

Query: 993  VKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAV 814
            VK+  R V H DII+FF+KNMV ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AV
Sbjct: 896  VKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAV 955

Query: 813  DFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLT 634
            DFPKTGK+V+MP +LKPK+YPDFMGKEE QSYKS KILGKLYR+++D  + + E S  L 
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLE 1015

Query: 633  YPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPK 454
                +I YD  LEI GS  F+ DAW+CKCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK
Sbjct: 1016 LVPNDIPYDSSLEIPGSTVFMGDAWNCKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPK 1075

Query: 453  SSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYH 274
             S+KKQGELKERLKHAY+ LRK++R VFE M PDFD L D EKN  YE+KASAWYQV+Y+
Sbjct: 1076 YSAKKQGELKERLKHAYNMLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYN 1135

Query: 273  ESWVEKSKELQKVDDPGKTVLLSFAWIA 190
              WV +S ELQ  D    TV+LSFAWIA
Sbjct: 1136 PHWVARSLELQLPDAVSSTVMLSFAWIA 1163


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  597 bits (1540), Expect = e-168
 Identities = 288/388 (74%), Positives = 327/388 (84%)
 Frame = -1

Query: 1353 LEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAVD 1174
            LE GQCFIQVS+PSLE+CF KHGS+FS  KKNL+V+KGLVVIAKNPCLHPGDVRILEAVD
Sbjct: 776  LEQGQCFIQVSSPSLENCFVKHGSKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 1173 VPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGE 994
            VP L HL+DCL+FPQKG+RPH NEASGSDLDGDLYFVTWD+N+IPPSKKSW PM+YEP E
Sbjct: 836  VPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENIIPPSKKSWIPMNYEPAE 895

Query: 993  VKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAV 814
            VK+  R V H DII+FF+KNMV ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AV
Sbjct: 896  VKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAV 955

Query: 813  DFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLT 634
            DFPKTGK+V+MP +LKPK+YPDFMGKEE QSYKS KILGKLYR+++D  + + E S  L 
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLE 1015

Query: 633  YPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPK 454
               ++I YD  LEI GS  FI DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK
Sbjct: 1016 VVPKDIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPK 1075

Query: 453  SSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYH 274
             S+KKQGELKERLKHAY+ LRK++R VFE M PDFD L D EKN  YE+KASAWYQV+YH
Sbjct: 1076 YSAKKQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYH 1135

Query: 273  ESWVEKSKELQKVDDPGKTVLLSFAWIA 190
              WV +S ELQ  D    TV+LSFAWIA
Sbjct: 1136 PHWVARSLELQIPDAVSSTVMLSFAWIA 1163


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
            gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
            6 [Theobroma cacao]
          Length = 1197

 Score =  597 bits (1539), Expect = e-168
 Identities = 282/389 (72%), Positives = 323/389 (83%)
 Frame = -1

Query: 1356 VLEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAV 1177
            VLE GQCFIQVS PS+E+CF KHGS F++TKKN EVI+GLVVIAKNPCLHPGD+RILEAV
Sbjct: 775  VLEQGQCFIQVSNPSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEAV 834

Query: 1176 DVPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPG 997
            D PGL HL+DCL+FPQKGERPH NEASGSDLDGDLYFVTW+D LIPP KKSWPPM Y+PG
Sbjct: 835  DAPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDPG 894

Query: 996  EVKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIA 817
            E KE  R V H DII+FF KNMVNE LGTICNAHVVHAD S+YGALDEKCI LAELAA A
Sbjct: 895  ETKEIQREVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATA 954

Query: 816  VDFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQL 637
            VDFPKTGKIVSMP  LKPKLYPDFMGKEE QSYKS KILG+LYR I+D Y++D   S ++
Sbjct: 955  VDFPKTGKIVSMPANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDVYDEDLSESSEI 1014

Query: 636  TYPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMP 457
               S +I YD +LE+TGS D+I DAW  KCSYD QL+GLLGQYKV  E+EVVTGHIWSMP
Sbjct: 1015 NLDSPDINYDTDLEVTGSADYIDDAWVKKCSYDRQLIGLLGQYKVKREEEVVTGHIWSMP 1074

Query: 456  KSSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSY 277
            K +S+K G+LKE+L H+Y ALRK++R++FE M  + +QL++ E+N  YE+KASAWYQV+Y
Sbjct: 1075 KYTSRKLGDLKEKLGHSYGALRKEFRQIFESMDSEIEQLNEDERNELYERKASAWYQVTY 1134

Query: 276  HESWVEKSKELQKVDDPGKTVLLSFAWIA 190
            H  WVEK  ELQK D     V+LSFAWIA
Sbjct: 1135 HPKWVEKKLELQKSDGADPVVMLSFAWIA 1163


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  596 bits (1537), Expect = e-168
 Identities = 288/388 (74%), Positives = 326/388 (84%)
 Frame = -1

Query: 1353 LEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAVD 1174
            LE GQCFIQVS+PSLE+CF KHG +FS  KKNL+V+KGLVVIAKNPCLHPGDVRILEAVD
Sbjct: 776  LEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 1173 VPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGE 994
            VPGL HL+DCL+FPQKG+RPH NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM+YEP E
Sbjct: 836  VPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAE 895

Query: 993  VKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAV 814
            VK+  R V H DII+FF+KNMV ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AV
Sbjct: 896  VKQMGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAV 955

Query: 813  DFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLT 634
            DFPKTGK+V+MP +LKPK+YPDFMGKEE QSYKS KILGKLYR+++D  + + E S  L 
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLE 1015

Query: 633  YPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPK 454
                +I YD  LEI GS  FI DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK
Sbjct: 1016 LVPNDIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPK 1075

Query: 453  SSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYH 274
             S+KKQGELKERLKHAY+ LRK++R VFE M PDFD L D EKN  YE+KASAWYQV+Y+
Sbjct: 1076 YSAKKQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYN 1135

Query: 273  ESWVEKSKELQKVDDPGKTVLLSFAWIA 190
              WV +S ELQ  D    TV+LSFAWIA
Sbjct: 1136 PHWVARSLELQLPDAVSSTVMLSFAWIA 1163


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  595 bits (1534), Expect = e-167
 Identities = 287/388 (73%), Positives = 326/388 (84%)
 Frame = -1

Query: 1353 LEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAVD 1174
            LE GQCFIQVS+PSLE+CF KHG +FS  K+NL+V+KGLVVIAKNPCLHPGDVRILEAVD
Sbjct: 776  LEQGQCFIQVSSPSLENCFVKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 1173 VPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGE 994
            VP L HL+DCL+FPQKG+RPH NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM+YEP E
Sbjct: 836  VPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAE 895

Query: 993  VKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAV 814
            VK+  R V H DII+FF+KNMV ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AV
Sbjct: 896  VKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAV 955

Query: 813  DFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLT 634
            DFPKTGK+V+MP +LKPK+YPDFMGKEE QSYKS KILGKLYR+++D  + + E S  L 
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLE 1015

Query: 633  YPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPK 454
               ++I YD  LEI GS  FI DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK
Sbjct: 1016 VVPKDIPYDSTLEILGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPK 1075

Query: 453  SSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYH 274
             S+KKQGELKERLKHAY+ LRK++R VFE M PDFD L D EKN  YE+KASAWYQV+YH
Sbjct: 1076 YSAKKQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYH 1135

Query: 273  ESWVEKSKELQKVDDPGKTVLLSFAWIA 190
              WV +S ELQ  D    TV+LSFAWIA
Sbjct: 1136 PHWVARSLELQLPDAVSNTVMLSFAWIA 1163


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  594 bits (1531), Expect = e-167
 Identities = 286/388 (73%), Positives = 326/388 (84%)
 Frame = -1

Query: 1353 LEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAVD 1174
            LE GQCFIQVS+PSLE+CF KHG +FS  KKNL+V+KGLVVIAKNPCLHPGDVRILEAVD
Sbjct: 776  LEQGQCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 1173 VPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGE 994
            VP L HL+DCL+FPQKG+RPH NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM+YEP E
Sbjct: 836  VPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAE 895

Query: 993  VKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAV 814
            VK+  R V H DII+FF+KNMV ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AV
Sbjct: 896  VKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAV 955

Query: 813  DFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLT 634
            DFPKTGK+V+MP +LKPK+YPDFMGKEE QSYKS KILGKLYR+++D  + + E S  L 
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLE 1015

Query: 633  YPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPK 454
               ++I YD  LEI GS  FI DAW+ KCSYDGQL GLLGQYKVN E+EVVTG+IWSMPK
Sbjct: 1016 VVPKDIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGYIWSMPK 1075

Query: 453  SSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYH 274
             ++KKQGELKERLKHAY+ LRK++R VFE M PDFD L D EKN  YE+KASAWYQV+YH
Sbjct: 1076 YNAKKQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYH 1135

Query: 273  ESWVEKSKELQKVDDPGKTVLLSFAWIA 190
              WV +S ELQ  D    TV+LSFAWIA
Sbjct: 1136 PHWVARSLELQLADAVSNTVMLSFAWIA 1163


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score =  592 bits (1525), Expect = e-166
 Identities = 276/390 (70%), Positives = 331/390 (84%), Gaps = 1/390 (0%)
 Frame = -1

Query: 1356 VLEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAV 1177
            VLE GQCFIQVSTPSLE+CF+KHGS FS+TK NLEVIKG VVIAKNPCLHPGD+RILEAV
Sbjct: 771  VLEQGQCFIQVSTPSLENCFSKHGSRFSETKNNLEVIKGFVVIAKNPCLHPGDIRILEAV 830

Query: 1176 DVPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPG 997
            DVPGL HL+DCL+FPQKG+RPH NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM Y+P 
Sbjct: 831  DVPGLHHLYDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKKSWNPMQYDPA 890

Query: 996  EVKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIA 817
            + +  PR VT  DII+FF++NMVNESLG ICNAHVVHAD S YGALDEKC+ LAELAAIA
Sbjct: 891  KPRTLPRDVTQKDIIDFFSRNMVNESLGAICNAHVVHADLSDYGALDEKCLSLAELAAIA 950

Query: 816  VDFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQL 637
            VDFPKTG IV+MP  LKPK+YPDFMGKEE QSYKSTKI+G+LYR+I+D Y+ D  PS +L
Sbjct: 951  VDFPKTGIIVTMPAHLKPKIYPDFMGKEEYQSYKSTKIMGRLYRQIKDEYSDDVSPSSEL 1010

Query: 636  TYPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMP 457
               S NI +D +LE+ G+ DF+ DAW  KCSYDGQL GL+ QYKV  E+EVVTG IWSMP
Sbjct: 1011 NIVSSNIPFDTDLEVPGAADFLDDAWEKKCSYDGQLKGLMIQYKVKREEEVVTGQIWSMP 1070

Query: 456  KSSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSY 277
            K +S+K+G+LKERLKH+Y+ LRK++R+VFE +  DF+QL+D EKNV YE++ASAWYQ++Y
Sbjct: 1071 KHNSRKEGDLKERLKHSYTGLRKEFRQVFEKVDSDFEQLTDDEKNVLYEKRASAWYQITY 1130

Query: 276  HESWVEKSKEL-QKVDDPGKTVLLSFAWIA 190
            H  WV+KS+++  ++++    V+LSFAWIA
Sbjct: 1131 HPKWVKKSQDMHDQLEEVKNVVMLSFAWIA 1160


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  590 bits (1522), Expect = e-166
 Identities = 286/388 (73%), Positives = 325/388 (83%)
 Frame = -1

Query: 1353 LEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAVD 1174
            LE GQCFIQVS+PSLE+CF KHG +FS  KKNL+V+KGLVVIAKNPCLHPGDVRILEAVD
Sbjct: 776  LEQGQCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 1173 VPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGE 994
            VP L HL+DCL+FPQKG+RPH NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM+YEP E
Sbjct: 836  VPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAE 895

Query: 993  VKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAV 814
            VK+  R V H DII+FF+KNMV ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AV
Sbjct: 896  VKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAV 955

Query: 813  DFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLT 634
            DFPKTGK+V+MP +LKPK+YPDFMGKEE QSYKS KILGKLYR+++D  + + E S  L 
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLE 1015

Query: 633  YPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPK 454
               ++I YD  L I GS  FI DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK
Sbjct: 1016 VVPKDIPYDTTLVIPGSTVFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPK 1075

Query: 453  SSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYH 274
             S+KKQGELKERLKHAY+ LRK++R VFE M PDFD L D EKN  YE+KASAWYQV+Y+
Sbjct: 1076 YSAKKQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYN 1135

Query: 273  ESWVEKSKELQKVDDPGKTVLLSFAWIA 190
              WV +S ELQ  D    TV+LSFAWIA
Sbjct: 1136 PHWVARSLELQLPDAISSTVMLSFAWIA 1163


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  588 bits (1516), Expect = e-165
 Identities = 277/390 (71%), Positives = 326/390 (83%), Gaps = 1/390 (0%)
 Frame = -1

Query: 1356 VLEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAV 1177
            VL+ GQCFIQVSTP LE CF+KHGS F++TK NL V++G VVIAKNPCLHPGDVRILEAV
Sbjct: 774  VLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAV 833

Query: 1176 DVPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPG 997
            D P L HL+DCL+FP+ GERPH NEASGSDLDGDLYF TWD NLIPPSKKSWPPM+Y P 
Sbjct: 834  DAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPA 893

Query: 996  EVKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIA 817
            EVK   R +T  DI+EFF KNM+NESLGTICNAHVVHAD SK+GALDE CI+L+ELAA A
Sbjct: 894  EVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATA 953

Query: 816  VDFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAY-NQDYEPSPQ 640
            VDFPKTGK+V+MPP LKPKLYPDFMGKE  QSYKSTKILGK+YRRIRDAY + D   S +
Sbjct: 954  VDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRE 1013

Query: 639  LTYPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSM 460
            L +   ++ YD +LE+ G+ DFIA+AW  KCSYDGQL GLLGQYKVN E+E+VTGHIWSM
Sbjct: 1014 LNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSM 1073

Query: 459  PKSSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVS 280
            PK  S+KQGELKE+LKH+YS L+KD+R+VFE +GP+F+QL+  E+N  YE+KASAWYQV+
Sbjct: 1074 PKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVA 1133

Query: 279  YHESWVEKSKELQKVDDPGKTVLLSFAWIA 190
            YH +W++KS EL++ D P    +LSF WIA
Sbjct: 1134 YHPTWLKKSLELREPDAPEAVPMLSFPWIA 1163


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score =  588 bits (1516), Expect = e-165
 Identities = 277/390 (71%), Positives = 326/390 (83%), Gaps = 1/390 (0%)
 Frame = -1

Query: 1356 VLEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAV 1177
            VL+ GQCFIQVSTP LE CF+KHGS F++TK NL V++G VVIAKNPCLHPGDVRILEAV
Sbjct: 774  VLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAV 833

Query: 1176 DVPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPG 997
            D P L HL+DCL+FP+ GERPH NEASGSDLDGDLYF TWD NLIPPSKKSWPPM+Y P 
Sbjct: 834  DAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPA 893

Query: 996  EVKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIA 817
            EVK   R +T  DI+EFF KNM+NESLGTICNAHVVHAD SK+GALDE CI+L+ELAA A
Sbjct: 894  EVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATA 953

Query: 816  VDFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAY-NQDYEPSPQ 640
            VDFPKTGK+V+MPP LKPKLYPDFMGKE  QSYKSTKILGK+YRRIRDAY + D   S +
Sbjct: 954  VDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRE 1013

Query: 639  LTYPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSM 460
            L +   ++ YD +LE+ G+ DFIA+AW  KCSYDGQL GLLGQYKVN E+E+VTGHIWSM
Sbjct: 1014 LNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSM 1073

Query: 459  PKSSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVS 280
            PK  S+KQGELKE+LKH+YS L+KD+R+VFE +GP+F+QL+  E+N  YE+KASAWYQV+
Sbjct: 1074 PKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVA 1133

Query: 279  YHESWVEKSKELQKVDDPGKTVLLSFAWIA 190
            YH +W++KS EL++ D P    +LSF WIA
Sbjct: 1134 YHPTWLKKSLELREPDAPEAVPMLSFPWIA 1163


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score =  587 bits (1514), Expect = e-165
 Identities = 282/388 (72%), Positives = 323/388 (83%)
 Frame = -1

Query: 1353 LEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAVD 1174
            LE GQCFIQVS+PSLE CF KHG +FS+ KKNL+VIKGLVVIAKNPCLHPGDVRILEAVD
Sbjct: 777  LEQGQCFIQVSSPSLETCFVKHGPKFSEIKKNLQVIKGLVVIAKNPCLHPGDVRILEAVD 836

Query: 1173 VPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGE 994
            VPGL HL+DCL+FPQKG+RPH NEASGSDLDGDLYFVTWD+NLIPPSKKSW PMDY P E
Sbjct: 837  VPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMDYAPAE 896

Query: 993  VKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAV 814
             K+  R V H+DII+FF+KNMV ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AV
Sbjct: 897  AKQLGRQVQHTDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAV 956

Query: 813  DFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLT 634
            DFPKTGK+V+MP +LKPK+YPDFMGKE  Q+Y+S KILGKLYR++ D Y+ +   S  L 
Sbjct: 957  DFPKTGKLVTMPFDLKPKMYPDFMGKEPFQTYESKKILGKLYRQVIDVYDAEGGESSGLE 1016

Query: 633  YPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPK 454
            +  ++I YD  +EI G  DFI DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK
Sbjct: 1017 FVPKDIPYDTNIEILGYEDFIDDAWNHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPK 1076

Query: 453  SSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYH 274
             S+KKQGELKERLKHAY+ LRK++R VFE M PDFD L   EKN  YE+KASAWY+V+YH
Sbjct: 1077 YSAKKQGELKERLKHAYNTLRKEFRNVFEQMEPDFDMLPVDEKNDMYERKASAWYRVTYH 1136

Query: 273  ESWVEKSKELQKVDDPGKTVLLSFAWIA 190
              WV +S ELQ  D     V+LSFAWIA
Sbjct: 1137 PHWVTRSLELQLPDAVSNGVMLSFAWIA 1164


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score =  585 bits (1508), Expect = e-164
 Identities = 277/390 (71%), Positives = 324/390 (83%), Gaps = 1/390 (0%)
 Frame = -1

Query: 1356 VLEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAV 1177
            VLE GQCFIQVS   LE+CF KHGS+FS+TKKNL+V+KG VVIAKNPCLHPGD+RILEAV
Sbjct: 775  VLEQGQCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAV 834

Query: 1176 DVPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPG 997
            D PGL HL+DCL+FPQKGERPH NEASGSDLDGDLYFVTWD+NLIPPSK+SW PM Y+  
Sbjct: 835  DAPGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAA 894

Query: 996  EVKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIA 817
            E K+  R V H DI+EFF KNM NE+LG ICNAHVV AD S+YGALDEKC+ LAELAA A
Sbjct: 895  EAKQLTRPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATA 954

Query: 816  VDFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAY-NQDYEPSPQ 640
            VDFPKTGKIVSMP +LKPK+YPDFMGKEE QSYKS KILG+LYR+I+DAY + D   S +
Sbjct: 955  VDFPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSE 1014

Query: 639  LTYPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSM 460
            L +   +I YD +LE+ G+ DFI+DAW  KCSYDGQL GLL QYKV  E+EVVTGH+WSM
Sbjct: 1015 LNFVRGDIPYDLDLEVLGATDFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSM 1074

Query: 459  PKSSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVS 280
            PK SS+KQG+LKERLKH+Y+ L++++R+VFE M  DF QL D EKN+ YE+KASAWYQV+
Sbjct: 1075 PKGSSRKQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVT 1134

Query: 279  YHESWVEKSKELQKVDDPGKTVLLSFAWIA 190
            YH  W++KS ELQ  D  G +V+LSFAWIA
Sbjct: 1135 YHPHWIQKSLELQDSDGAGISVMLSFAWIA 1164


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
            vesca]
          Length = 1197

 Score =  584 bits (1506), Expect = e-164
 Identities = 270/389 (69%), Positives = 320/389 (82%)
 Frame = -1

Query: 1356 VLEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAV 1177
            VLE GQCF+QVSTPSLE+CFAKHGS F +T KNL+VIKG VV+AKNPCLHPGD+RILEAV
Sbjct: 775  VLEQGQCFVQVSTPSLENCFAKHGSRFDQTDKNLQVIKGFVVVAKNPCLHPGDIRILEAV 834

Query: 1176 DVPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPG 997
            D PGL HLHDCL+FPQKG RPH +EASGSDLDGDLYFVTWD+NLIPP KKSW PM+YEP 
Sbjct: 835  DAPGLHHLHDCLVFPQKGHRPHTDEASGSDLDGDLYFVTWDENLIPPRKKSWQPMEYEPA 894

Query: 996  EVKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIA 817
            E K   R VT  D+IEFF +NMVNE+LG ICNAHVVH+D S+YGA DE C+KLAELAA+A
Sbjct: 895  EAKLSGRSVTSQDLIEFFVRNMVNENLGAICNAHVVHSDRSEYGAFDENCLKLAELAAVA 954

Query: 816  VDFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQL 637
            VDFPKTGKIV+MPP LKPKLYPDFMGK++ QSYKS KILG+LYR+I DAY++D   S + 
Sbjct: 955  VDFPKTGKIVTMPPHLKPKLYPDFMGKQDYQSYKSNKILGRLYRKICDAYDEDVANSSEQ 1014

Query: 636  TYPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMP 457
             +   ++ YD +LE+  + DFIADAW  KCSYD QL GL+ QYK+  E+E+VTGH+WSMP
Sbjct: 1015 NHVPSDVKYDMDLEVPKAADFIADAWERKCSYDSQLRGLMTQYKIMREEEIVTGHVWSMP 1074

Query: 456  KSSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSY 277
            K +S+KQGEL+ERLKH+YSAL+K++R+ FE M   F+ L D +KN  YEQKASAWYQV+Y
Sbjct: 1075 KYTSRKQGELQERLKHSYSALKKEFRQFFEKMDTGFESLIDDQKNSFYEQKASAWYQVTY 1134

Query: 276  HESWVEKSKELQKVDDPGKTVLLSFAWIA 190
            H  WV+KS +L   D PG  V+LSFAWIA
Sbjct: 1135 HPDWVKKSLDLHGPDGPGDVVMLSFAWIA 1163


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  584 bits (1506), Expect = e-164
 Identities = 276/389 (70%), Positives = 323/389 (83%)
 Frame = -1

Query: 1356 VLEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAV 1177
            +LE GQCFIQVS  SLE CF KHG++FS+ +KNL+VIKG VVIAKNPCLHPGDVR+LEAV
Sbjct: 778  MLEQGQCFIQVSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAV 837

Query: 1176 DVPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPG 997
            DVPGL HL+DCL+FPQKGERPH NEASGSDLDGDLYFVTWD+NLIPPSK+SW PM Y+  
Sbjct: 838  DVPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAA 897

Query: 996  EVKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIA 817
            E K   R V H DIIEFF KNMVN++LG ICNAHVVHAD S+YGA D+ C+ LAELAA A
Sbjct: 898  EAKLLARPVNHQDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATA 957

Query: 816  VDFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQL 637
            VDFPKTGK+VSMPP LKPK+YPDFMGKEE QSYKS KILG+LYR+I+DAY++D   S +L
Sbjct: 958  VDFPKTGKVVSMPPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSEL 1017

Query: 636  TYPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMP 457
                 +I YD +LE+ G+ D+I+DAW  KCSYDGQL GLL QYKV  E+EVVTGHIWSMP
Sbjct: 1018 NLVPGDIPYDSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMP 1077

Query: 456  KSSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSY 277
            K SS+KQGELK+RLKH+Y++L+K++R++FE M  +F+QL D EKN  YEQKASAWYQV Y
Sbjct: 1078 KYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVY 1137

Query: 276  HESWVEKSKELQKVDDPGKTVLLSFAWIA 190
            H  WV+KS ELQ  D  G +V+LSFAWIA
Sbjct: 1138 HPHWVKKSLELQDPDGAGTSVMLSFAWIA 1166


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score =  584 bits (1505), Expect = e-164
 Identities = 282/388 (72%), Positives = 320/388 (82%)
 Frame = -1

Query: 1353 LEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAVD 1174
            LE GQCFIQVS+PSLE CF KHG EFS+ KKNL+V+KGLVVIAKNPCLHPGDVRILEAVD
Sbjct: 776  LEQGQCFIQVSSPSLETCFVKHGPEFSEIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 1173 VPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGE 994
            VPGL HL+DCL+FPQKG+RPH NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM Y P E
Sbjct: 836  VPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMAYAPAE 895

Query: 993  VKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAV 814
             K+  R V H+DII+FF KNMV ESLG ICNAHVVHAD S++GA+DEKC+KLAELAA+AV
Sbjct: 896  AKQLGRQVQHTDIIDFFLKNMVQESLGEICNAHVVHADLSEFGAMDEKCLKLAELAALAV 955

Query: 813  DFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLT 634
            DFPKTGK+V+MP +LKPK+YPDFMGKE  QSY+S KILGKLYR++ D Y+ +   S  L 
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEPFQSYESKKILGKLYRQVIDVYDAEGGESSGLE 1015

Query: 633  YPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPK 454
            Y  ++I YD  LEI G  DFI DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK
Sbjct: 1016 YVPKDIPYDTNLEIPGYEDFIDDAWNHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPK 1075

Query: 453  SSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYH 274
             S+KKQGELKERLKHAY+ LRK++R VFE M PDFD L   EKN  YE+KA AWY+V+YH
Sbjct: 1076 YSAKKQGELKERLKHAYNMLRKEFRNVFEQMEPDFDLLPIDEKNDMYERKAFAWYRVTYH 1135

Query: 273  ESWVEKSKELQKVDDPGKTVLLSFAWIA 190
              WV +S ELQ  D     V+LSFAWIA
Sbjct: 1136 PHWVTRSLELQLPDAVSNGVMLSFAWIA 1163


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  584 bits (1505), Expect = e-164
 Identities = 276/395 (69%), Positives = 322/395 (81%), Gaps = 6/395 (1%)
 Frame = -1

Query: 1356 VLEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAV 1177
            VLE+GQCFIQVS PSLE CF KHGS FS++KK L+V+KG VV+AKNPCLHPGD+RILEAV
Sbjct: 775  VLEHGQCFIQVSNPSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRILEAV 834

Query: 1176 DVPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPG 997
            D P L HLHDCL+FPQKG+RPH NEASGSDLDGDLYFVTWD+NLIPPSK+SW PM Y+  
Sbjct: 835  DAPELHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAA 894

Query: 996  EVKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIA 817
            E K+  R V H DII+FF KNMVNE+LG ICNAHVVHAD S+YGALDE CIKLAELAA A
Sbjct: 895  EAKQLNRPVNHQDIIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATA 954

Query: 816  VDFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQL 637
            VDFPKTGK+V+MPP LKPKLYPDFMGKE+ QSY S KILG+LYR+++D YN D +     
Sbjct: 955  VDFPKTGKLVTMPPHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDA 1014

Query: 636  TYPSE------NIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTG 475
               SE      +I YD++LE++GS D+I DAW  KCSYDGQL GLL QYKV  E+EVVTG
Sbjct: 1015 ATSSELNLVRGDIPYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTG 1074

Query: 474  HIWSMPKSSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASA 295
            HIWSMPK +S+KQGELKERLK +Y +L+K++R+VFE M  DF+QL++ EKN+ YEQKASA
Sbjct: 1075 HIWSMPKCNSRKQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASA 1134

Query: 294  WYQVSYHESWVEKSKELQKVDDPGKTVLLSFAWIA 190
            WYQV+YH  WV KS ELQ+ D  G   +LSFAWIA
Sbjct: 1135 WYQVAYHPKWVNKSMELQEPDAAGCASMLSFAWIA 1169


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571459266|ref|XP_006581359.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  582 bits (1499), Expect = e-163
 Identities = 281/396 (70%), Positives = 327/396 (82%), Gaps = 7/396 (1%)
 Frame = -1

Query: 1356 VLEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAV 1177
            VLE GQCF+QVSTPSLE+CF+KHGS FS+TK NL V+KG V+IAKNPCLHPGDVR+LEAV
Sbjct: 775  VLEQGQCFVQVSTPSLENCFSKHGSRFSETK-NLHVVKGFVIIAKNPCLHPGDVRVLEAV 833

Query: 1176 DVPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPG 997
            D P L HL+DCL+FPQKG+RPH NEASGSDLDGDLYFVTWD+NLIPPSK+SW PM+Y P 
Sbjct: 834  DAPDLHHLNDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMEYAPQ 893

Query: 996  EVKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIA 817
            E K K R V   DIIEFF +NMVNE LG ICNAHVVHAD+S YGALDEKCI LAELAA A
Sbjct: 894  ESKLKTRQVMTRDIIEFFVRNMVNEHLGAICNAHVVHADSSDYGALDEKCIHLAELAATA 953

Query: 816  VDFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQL 637
            VDFPKTGK+V+MPP LKPKLYPDFMGKE  QSY+S KILG+LYRRI+DAY++D + +P L
Sbjct: 954  VDFPKTGKLVTMPPHLKPKLYPDFMGKERHQSYRSKKILGRLYRRIKDAYDEDID-APYL 1012

Query: 636  TYPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMP 457
             + + +I YD++LE+ GS DFIADAW  KCSYDGQL GLLGQYKV  E+EVVTG IWSMP
Sbjct: 1013 NFVTGDIPYDKDLEVPGSADFIADAWEQKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMP 1072

Query: 456  KSSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSY 277
            K +S+KQGELKERLKH+YSAL+K++R  FE +  D  +LS+ EKN+ YEQKASAWYQV+Y
Sbjct: 1073 KYNSRKQGELKERLKHSYSALKKEFRHTFEKLNSDVGELSEEEKNLFYEQKASAWYQVTY 1132

Query: 276  HESWVEKSKEL-------QKVDDPGKTVLLSFAWIA 190
            H  WV+KS +L       Q+ D  G TV+LSF WIA
Sbjct: 1133 HPEWVKKSLDLQDKSSENQEADSLGSTVMLSFPWIA 1168


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
            gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
            6 [Gossypium hirsutum]
          Length = 1196

 Score =  580 bits (1494), Expect = e-163
 Identities = 277/389 (71%), Positives = 324/389 (83%)
 Frame = -1

Query: 1356 VLEYGQCFIQVSTPSLEDCFAKHGSEFSKTKKNLEVIKGLVVIAKNPCLHPGDVRILEAV 1177
            VLE GQCFIQVS PSL++CF KHGS F++TKKN EVIKGLVVIAKNPCLHPGD+RILEAV
Sbjct: 774  VLEQGQCFIQVSNPSLQNCFLKHGSRFAETKKNFEVIKGLVVIAKNPCLHPGDIRILEAV 833

Query: 1176 DVPGLRHLHDCLIFPQKGERPHPNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPG 997
            D PGL HL+DCL+FPQKGERPH NEASGSDLDGDLYFVTW++ LIPPSKKS  PM Y+  
Sbjct: 834  DAPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEEALIPPSKKSSQPMQYDLD 893

Query: 996  EVKEKPRGVTHSDIIEFFTKNMVNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIA 817
              +E  R VTH DIIEFF+KNMVNE LG+ICNAHVVH+D S++GA DEKCI LAELAAIA
Sbjct: 894  APRELNRSVTHKDIIEFFSKNMVNEHLGSICNAHVVHSDLSEHGASDEKCIHLAELAAIA 953

Query: 816  VDFPKTGKIVSMPPELKPKLYPDFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQL 637
            VDFPKTGKIVSMP +LKPKLYPDFMGKEE QSYKS KILG+LYR I+DAY++D   S +L
Sbjct: 954  VDFPKTGKIVSMPAQLKPKLYPDFMGKEEFQSYKSNKILGRLYRYIKDAYDKDVSESSEL 1013

Query: 636  TYPSENIFYDRELEITGSRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMP 457
             + + +I YD +LEITGS D+I DAW+ KCSYDGQL+GLL QYKV  E+EVVTG IWSMP
Sbjct: 1014 NFGASDINYDADLEITGSADYITDAWAKKCSYDGQLIGLLKQYKVKREEEVVTGQIWSMP 1073

Query: 456  KSSSKKQGELKERLKHAYSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSY 277
            K +SKK G+LKE+L H+Y +LRK++R++FE M  +F+QL++ EKN  YE+KASAWYQV+Y
Sbjct: 1074 KYASKKLGDLKEKLGHSYGSLRKEFRQLFENMDSEFEQLNEDEKNKLYERKASAWYQVTY 1133

Query: 276  HESWVEKSKELQKVDDPGKTVLLSFAWIA 190
            H  WV+K  E QK D     V+LSFAWIA
Sbjct: 1134 HPEWVQKKLEFQKPDGDEGVVMLSFAWIA 1162