BLASTX nr result

ID: Mentha22_contig00022623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00022623
         (635 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44036.1| hypothetical protein MIMGU_mgv1a026149mg [Mimulus...    65   2e-08
ref|XP_007032935.1| Pentatricopeptide repeat (PPR) superfamily p...    58   3e-06

>gb|EYU44036.1| hypothetical protein MIMGU_mgv1a026149mg [Mimulus guttatus]
          Length = 258

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 31/54 (57%), Positives = 42/54 (77%), Gaps = 3/54 (5%)
 Frame = -1

Query: 635 IAAFDNAIQVQKKRRRAAEEELASVKYHPLRDSANTS---SGCQVRSKRLKHTS 483
           IA FD A++++K+R  AA+EELASVKYHPLRD  ++S   + C+ R K+LKHTS
Sbjct: 184 IAGFDKALRIEKRRLNAAKEELASVKYHPLRDFGSSSFQPNDCRTRPKKLKHTS 237


>ref|XP_007032935.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508711964|gb|EOY03861.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 860

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
 Frame = +3

Query: 87  SMHKQSIITRSDVANAGHAKQTYAQVIKQKLQSHI---SRLVDMHPKCGHVHDSLMMFRN 257
           S+ K+ I T +++A  G  KQ +AQ+IK +LQS +   S LVDM+ KCG++HDS +MF  
Sbjct: 554 SLQKEIIDTCANLATVGLGKQIHAQIIKLELQSDVYICSTLVDMYSKCGNMHDSKLMFEK 613

Query: 258 SSD 266
           ++D
Sbjct: 614 ATD 616


Top