BLASTX nr result

ID: Mentha22_contig00021579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00021579
         (447 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    62   8e-08
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     59   5e-07
emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]    57   3e-06
ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily prot...    56   4e-06
ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobrom...    56   6e-06
emb|CAN60569.1| hypothetical protein VITISV_000226 [Vitis vinifera]    55   8e-06
emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]    55   8e-06

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/77 (42%), Positives = 45/77 (58%)
 Frame = -1

Query: 231 KYELVKFDGKNDFSYWRMQMKNLLISQXXXXXXXXXXXKPESMSDEDWEELDLEARAAII 52
           KYE+ KF+G N FS W+ +M++LLI Q           KP++M  EDW +LD  A +AI 
Sbjct: 5   KYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIR 64

Query: 51  LCLEMDIAFLVDGEDTA 1
           L L  D+   +  EDTA
Sbjct: 65  LHLSDDVVNNIIDEDTA 81


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = -1

Query: 231 KYELVKFDG-KNDFSYWRMQMKNLLISQXXXXXXXXXXXKPESMSDEDWEELDLEARAAI 55
           KYE+ KF+G K  FS W+ +MK+LLI Q           KPESM  EDWEELD +A +AI
Sbjct: 5   KYEVAKFNGDKPVFSMWQRRMKDLLIQQGLHKALGGKSKKPESMKLEDWEELDEKAASAI 64

Query: 54  ILCLEMDIAFLVDGEDTA 1
            L L  D+   +  E++A
Sbjct: 65  RLHLTDDVVNNIVDEESA 82


>emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]
          Length = 347

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/73 (35%), Positives = 43/73 (58%)
 Frame = -1

Query: 243 VKVGKYELVKFDGKNDFSYWRMQMKNLLISQXXXXXXXXXXXKPESMSDEDWEELDLEAR 64
           +   K+++VKFDG  +FS W  ++K+LL+ Q           +PE M+D DW++L+ +  
Sbjct: 4   ISSAKFDVVKFDGSGNFSLWHRRVKDLLVQQ--GMVKALYGKQPEGMNDIDWKDLEAKVA 61

Query: 63  AAIILCLEMDIAF 25
           A I LCL  D+ +
Sbjct: 62  ATIRLCLANDVMY 74


>ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
           gi|508775449|gb|EOY22705.1| Transducin/WD40 repeat-like
           superfamily protein [Theobroma cacao]
          Length = 1029

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/77 (35%), Positives = 46/77 (59%)
 Frame = -1

Query: 231 KYELVKFDGKNDFSYWRMQMKNLLISQXXXXXXXXXXXKPESMSDEDWEELDLEARAAII 52
           KYE+ KF+G+NDFS WR++M+ LL+ Q            P ++SD + ++L  +A + I+
Sbjct: 129 KYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEKDDLMKKAHSVIL 188

Query: 51  LCLEMDIAFLVDGEDTA 1
           L L  ++   V  E++A
Sbjct: 189 LALSDEVLREVTDEESA 205


>ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
           gi|508717229|gb|EOY09126.1| Uncharacterized protein
           TCM_024518 [Theobroma cacao]
          Length = 277

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/77 (36%), Positives = 46/77 (59%)
 Frame = -1

Query: 231 KYELVKFDGKNDFSYWRMQMKNLLISQXXXXXXXXXXXKPESMSDEDWEELDLEARAAII 52
           KYE+ KF+G+NDFS WR++M  LL+ Q            P ++SD + ++L  +A +AI+
Sbjct: 7   KYEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEKAHSAIL 66

Query: 51  LCLEMDIAFLVDGEDTA 1
           L L  ++   V  E++A
Sbjct: 67  LTLSDEVLREVTDEESA 83


>emb|CAN60569.1| hypothetical protein VITISV_000226 [Vitis vinifera]
          Length = 105

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/80 (32%), Positives = 45/80 (56%)
 Frame = -1

Query: 243 VKVGKYELVKFDGKNDFSYWRMQMKNLLISQXXXXXXXXXXXKPESMSDEDWEELDLEAR 64
           +   K+++VKF+G  +F  W+ ++K+LL+ Q            PE M D DW++L+ +  
Sbjct: 4   ISSAKFDVVKFNGSGNFGLWQRRVKDLLVQQGMVKALYEKQ--PEGMDDMDWKDLEAKVE 61

Query: 63  AAIILCLEMDIAFLVDGEDT 4
           A I LCL  D+ + V  E++
Sbjct: 62  ATIRLCLVDDVMYHVMDEES 81


>emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]
          Length = 127

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/80 (32%), Positives = 47/80 (58%)
 Frame = -1

Query: 243 VKVGKYELVKFDGKNDFSYWRMQMKNLLISQXXXXXXXXXXXKPESMSDEDWEELDLEAR 64
           +   K+++VKFDG  +F  W+ ++K+LL+ Q            PE M++ DW++L+++  
Sbjct: 4   ISSAKFDVVKFDGFGNFDLWQRRVKDLLVQQGMVKALYGKQ--PEGMNNMDWKDLEVKVA 61

Query: 63  AAIILCLEMDIAFLVDGEDT 4
           A I LCL  D+ + V  E++
Sbjct: 62  ATIRLCLADDVMYHVMDEES 81


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