BLASTX nr result

ID: Mentha22_contig00021497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00021497
         (475 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670...   100   3e-19
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...    89   5e-16
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...    87   2e-15
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    85   1e-14
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668...    84   3e-14
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    82   1e-13
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    79   5e-13
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    79   6e-13
gb|AAF79357.1|AC007887_16 F15O4.34 [Arabidopsis thaliana]              79   8e-13
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...    78   1e-12
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...    76   4e-12
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    75   7e-12
ref|XP_006586315.1| PREDICTED: uncharacterized protein LOC102664...    75   1e-11
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    72   6e-11
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            72   6e-11
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    72   6e-11
gb|AAF81336.1|AC007767_16 Strong similarity to a putative non-LT...    72   8e-11
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    72   8e-11
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    72   8e-11
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                72   1e-10

>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
          Length = 383

 Score =  100 bits (248), Expect = 3e-19
 Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
 Frame = +3

Query: 3   WNIHAKTDSLWIKWIHAEYLRGLDIWEFPYPRRDAPHMTNILRIRDQLISDCGGNLNDAK 182
           W++H+K DSLW++ +H  Y +G ++W+F     D+      + IRD +IS    N+  AK
Sbjct: 203 WDLHSKKDSLWVRLVHHYYFKGGNVWDFISSSSDSV----FIHIRDIIISK-EENIEVAK 257

Query: 183 AKLG-WFAGKGT--SEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDR 353
             L  W   + T   + Y++ R       W   +W   IP K S  LWLA   RL   DR
Sbjct: 258 LMLNSWGCNEQTLAGKMYDYIRGTRPVVHWSSIIWNPVIPSKMSFILWLATKNRLLALDR 317

Query: 354 MKYFDIARGCVLCESTDETHDHLFFKCDKAMAVWSGICSW 473
             + +    C LC +  E+H HLFF C  ++ VW+ I  W
Sbjct: 318 AAFLNKGFLCPLCTNEAESHAHLFFSCRTSLRVWAHIRDW 357


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
 Frame = +3

Query: 3   WNIHAKTDSLWIKWIHAEYLRGLDIWEFPYPRRDAPHMTNILRIRDQLISDCGGNLNDAK 182
           WN+ +K DSLW+KWI A Y++  ++        D+  M  IL+ R+ L  +   N+ +  
Sbjct: 263 WNLSSKEDSLWVKWIQAYYVKRSELMHIEMKNTDSWIMKAILKQREDL--EKIDNMEELM 320

Query: 183 AKLGWFAGKGTSEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRM-K 359
            +     GK     Y   +  G++K W   ++ +   P+ +  LWLA HGRL T DR+ K
Sbjct: 321 IRGSINMGK----LYRKLQDCGQRKEWKNLLYGNTARPRANFILWLACHGRLSTKDRLCK 376

Query: 360 YFDI-ARGCVLCESTDETHDHLFFKCDKAMAVWSGICSW 473
           Y  I  + C  C S +E+ +HLFF CD +  VW  +  W
Sbjct: 377 YGMIDDKSCCFC-SEEESMNHLFFVCDNSKRVWMEVLQW 414


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 2/159 (1%)
 Frame = +3

Query: 3    WNIHAKTDSLWIKWIHAEYLRGLDIWEFPYPRRDAPHMTNILRIRDQLISDCGGNLNDAK 182
            WN+  K+D+LWIKW+H  Y+RG  IW     +  +  M++++++R  L+       +  K
Sbjct: 705  WNVCNKSDNLWIKWLHTYYIRGQSIWSMVLKKSHSWIMSSMMKLRPLLLQYQSRMQDVFK 764

Query: 183  AKLGWFAGKGTSEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKY 362
             K          + Y     + EK  W   M  +   P+    LW A H RL + DR+  
Sbjct: 765  MK----------KIYLALFEESEKMSWRTLMCNNLARPRALFCLWQACHFRLASKDRLIK 814

Query: 363  F--DIARGCVLCESTDETHDHLFFKCDKAMAVWSGICSW 473
            F  ++   C  C S  E+H+HLFF C +   +W+ + +W
Sbjct: 815  FGLNVDANCAFCSSM-ESHEHLFFGCIELKTIWTAVLNW 852


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
 Frame = +3

Query: 3    WNIHAKTDSLWIKWIHAEYLRGLDIWEFPYPRRDAPHMTNILRIRDQL--ISD----CGG 164
            W I  K D LW++WIH+ Y++  DI       +    +  I++ RD L  I D    C G
Sbjct: 877  WAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQTTWILRKIVKARDHLSNIGDWDEICIG 936

Query: 165  NLNDAKAKLGWFAGKGTSEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKT 344
            +    K            +AY+     GE+  W + +  +Y  PK    LW+ LH RL T
Sbjct: 937  DKFSMK------------KAYKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPT 984

Query: 345  FDRMKYFDIA--RGCVLCESTDETHDHLFFKCDKAMAVWSGIC 467
             DR+  + +       LC +  ET  HLFF C  +  VWS IC
Sbjct: 985  VDRISRWGVQCDLNYRLCRNDGETIQHLFFSCSYSAGVWSKIC 1027


>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
          Length = 477

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
 Frame = +3

Query: 30  LWIKW-IHAEYLRGLDIWEFPYPRRDAPHMTNILRIRDQLISDCGGNLNDAKAKLG-WFA 203
           LW K  +H  Y +G ++W+F     D+  +  I+ IRD +I+    N+  AK  L  W +
Sbjct: 236 LWGKAEVHHNYFKGGNVWDFISSASDSVLIKKIIHIRD-IITIKEDNVEAAKQTLNSWNS 294

Query: 204 GKG--TSEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKYFDIAR 377
            +     +AY++ R       W   +W   IP K S  LWLA    L T DR  + +   
Sbjct: 295 NEQLLAGKAYDYIRGVKPAVNWNSVVWNPAIPSKMSFILWLATKNHLLTLDRAAFLNKGL 354

Query: 378 GCVLCESTDETHDHLFFKCDKAMAVWSGICSW 473
            C LC +  ++H HLFF C  ++ VW+ I  W
Sbjct: 355 LCPLCRTKAKSHAHLFFSCRISLQVWANIRDW 386


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
 Frame = +3

Query: 3    WNIHAKTDSLWIKWIHAEYLRGLDIWEFPYPRRDAPHMTNILRIRDQLISD--CGGNLND 176
            W + +   SLW+ WI    +R   + E     R   H  +IL   ++ +    C G   +
Sbjct: 1147 WRLVSAKHSLWVNWIQNNLIR--TVAEALSSHRRRSHRDDILNDIEEELEKLLCRGICTE 1204

Query: 177  AKAKL-----GWFAGKGTS-EAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRL 338
                L     G F  K  S E +   R +G  K W+KA+W S   PKF+   WLA H RL
Sbjct: 1205 QDRSLCRSIGGQFKAKFFSPEIWHQIREQGLVKQWHKAIWFSGATPKFTFISWLAAHDRL 1264

Query: 339  KTFDRMKYFD--IARGCVLCESTDETHDHLFFKCDKAMAVW 455
             T D+M  ++  I+  CVLC  + E+ DHLFF C+ +  +W
Sbjct: 1265 TTGDKMASWNRGISSVCVLCNISAESRDHLFFSCNFSSHIW 1305


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
 Frame = +3

Query: 96   RRDAPHMTNILRIRDQLISDCGGNLNDAKAKLGWFAGKG--------TSEAYEHFRAKGE 251
            RR   H  ++  + +  +        + + K+ W  GK         T + + H R+   
Sbjct: 994  RRQRRHRNDVYNVIEDALKKSWDTRTETEDKVLW-RGKSDVFRTTFSTRDTWHHTRSTSA 1052

Query: 252  KKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKYF--DIARGCVLCESTDETHDHLF 425
            +  W+K +W S+  PK+S   WLA HGRL T DRM  +   IA  C+ C+ T ET DHLF
Sbjct: 1053 RVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCIFCQGTLETRDHLF 1112

Query: 426  FKCDKAMAVW 455
            F C     +W
Sbjct: 1113 FTCSFTSVIW 1122


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
 Frame = +3

Query: 96  RRDAPHMTNIL-RIRDQLISDCGGNLNDAKAKLGWFAGK--------GTSEAYEHFRAKG 248
           RR   H TN L R+ ++LI       N A+ +  W  GK         T + + H R   
Sbjct: 243 RRRRRHRTNFLNRVEERLILSWNSR-NQAEDRALW-KGKENRFRSIFSTKDTWNHIRTVS 300

Query: 249 EKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKYFD--IARGCVLCESTDETHDHL 422
            K  WYK +W +   PK +  +WLA+H RL T DRM  ++  +   C+LC    E+ DHL
Sbjct: 301 NKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILCNKALESRDHL 360

Query: 423 FFKCDKAMAVW 455
           FF C  A  +W
Sbjct: 361 FFSCPFATEIW 371


>gb|AAF79357.1|AC007887_16 F15O4.34 [Arabidopsis thaliana]
          Length = 236

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
 Frame = +3

Query: 213 TSEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKYFD--IARGCV 386
           T E   H R       WYK +W  +  PK+S  +WLA+  RL T DRM +++   +  CV
Sbjct: 86  TKETLNHMRTISMDVDWYKGVWFGHSTPKYSFCVWLAVLNRLSTGDRMTHWNGGQSAACV 145

Query: 387 LCESTDETHDHLFFKCDKAMAVWSGI 464
           LC +  ET DHLFF CD A  VWS +
Sbjct: 146 LCHNAPETRDHLFFSCDFASIVWSNL 171


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
 Frame = +3

Query: 3   WNIHAKTDSLWIKWIHAEYLRGLDIWEFPYPRRDAPHMTNILRIRDQLISDCGGNLNDAK 182
           WNI +K D+LW+KWIHA +L+G ++            + ++++ R Q+      NL    
Sbjct: 366 WNICSKEDNLWVKWIHAYFLKGDNVMSATIKSNSTWILKSVMKQRPQV-----NNLQLVW 420

Query: 183 AKLGWFAGKGTSEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKY 362
            ++         + Y        K  W++ +  +   P+ +VTLWLA   RL T  R+K 
Sbjct: 421 IEMLRKRKFSMKQVYMELVEDHNKIDWFRLLRYNRARPRANVTLWLACQNRLATKTRLKN 480

Query: 363 FDIARG--CVLCESTDETHDHLFFKCDKAMAVW 455
            ++ +   C LC+  DE  DHL F C    A+W
Sbjct: 481 MNMIQCSLCSLCKEQDEDLDHLMFSCRVTKAIW 513


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
 Frame = +3

Query: 3    WNIHAKTDSLWIKWIHAEYLRGLDIWEFPYPRRDAPHMTNILRIRD---QLISDCGGNLN 173
            WN+  K D+LW+KWIHA Y++   +         +  + N+L  R+    L       LN
Sbjct: 705  WNLCKKVDNLWVKWIHAHYIKNSSVMNTMVTNNFSWVLKNVLSQREYIHTLQPVWDELLN 764

Query: 174  DAKAKLGWFAGKGTSEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDR 353
              + K+         +AY+    + ++  W   M ++   P+   T WLA HGRL T DR
Sbjct: 765  SERFKM--------KKAYDKM-MEADRVHWSGLMRKNCARPRAIHTTWLACHGRLGTKDR 815

Query: 354  MKYFDIARGCV--LCESTDETHDHLFFKCDKAMAVWSGI 464
            +  F +    +  LC+  +ET +H+ F C  A  +WS +
Sbjct: 816  LVRFGMITDKIWSLCKEVEETQNHILFSCKVATDIWSNV 854


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
 Frame = +3

Query: 213  TSEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKYFD--IARGCV 386
            T + + H R    ++ W+K +W ++  PKFS   WLA+  RL T DRM  ++      CV
Sbjct: 762  TKDTWNHIRTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCV 821

Query: 387  LCESTDETHDHLFFKCDKAMAVWSGI 464
             C S  ET DHLFF+C  +  +W+ I
Sbjct: 822  FCSSPMETRDHLFFQCCYSSEIWTSI 847


>ref|XP_006586315.1| PREDICTED: uncharacterized protein LOC102664837 [Glycine max]
          Length = 97

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
 Frame = +3

Query: 261 WYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKYFDIARG--CVLCESTDETHDHLFFKC 434
           W    +R+Y  P+ S T WLA HGRL T DR+  F + +   C LC   DE+HDHLFF C
Sbjct: 10  WRHLFYRNYARPRASHTTWLACHGRLATKDRLCRFGLIQEKICSLCNEVDESHDHLFFAC 69

Query: 435 DKAMAVWSGICSW 473
            ++  VWS + +W
Sbjct: 70  SESKKVWSEVLNW 82


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
 Frame = +3

Query: 213 TSEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKYFD--IARGCV 386
           T E +   R +  +  WY+ +W S+  PK+S   WLA   RL T DRM  ++  +   CV
Sbjct: 259 TKETWADTREQKPRNEWYQGIWFSHATPKYSFITWLATKNRLSTGDRMMSWNAGVNLSCV 318

Query: 387 LCESTDETHDHLFFKCDKAMAVWSGICS 470
            C+   ET +HLFF C  +  VWSG+ S
Sbjct: 319 FCQEQTETRNHLFFTCRYSREVWSGLTS 346


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 49/132 (37%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
 Frame = +3

Query: 93  PRRDAPHMTNILRIRDQLISDCGGNLNDAKAKLGWFAGKG--------TSEAYEHFRAKG 248
           PRR   H T +LRI D +       L   +  + W  G G        T E +   R   
Sbjct: 251 PRRHR-HDT-LLRIEDVIAEVRHQGLTSGEDTVRW-KGNGDIFKPCFNTKETWAATREPK 307

Query: 249 EKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKYFDIA--RGCVLCESTDETHDHL 422
            K  WYK +W S+  PK+SV  W+A+  RL T DRM  ++      CVLC    ET DHL
Sbjct: 308 LKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRDHL 367

Query: 423 FFKCDKAMAVWS 458
           FF C  +  VWS
Sbjct: 368 FFTCPYSAEVWS 379


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
 Frame = +3

Query: 213 TSEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKYFDIARG--CV 386
           T + +   R K  +  WYK +W S+  PK+    WLAL  RL T  RM+ ++      C 
Sbjct: 446 TKDTWNQVRKKSNEVAWYKGVWFSHSTPKYQFCTWLALRNRLSTGYRMQLWNNGSDVKCT 505

Query: 387 LCESTDETHDHLFFKCDKAMAVWSGI 464
            C ++ ET DHLFF C  A A+W+ I
Sbjct: 506 FCSTSIETRDHLFFSCSYASAIWTAI 531


>gb|AAF81336.1|AC007767_16 Strong similarity to a putative non-LTR retroelement reverse
           transcriptase At2g23880 gi|3738337 from Arabidopsis
           thaliana BAC F27L4 gb|AC005170 [Arabidopsis thaliana]
          Length = 206

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
 Frame = +3

Query: 213 TSEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKYFD--IARGCV 386
           T + + H R    ++ W+  +W ++  PKFS   WLA+  RL   DRM  ++      CV
Sbjct: 49  TKDTWNHIRTSSNQRAWHTGVWFAHATPKFSFCAWLAVRNRLSMVDRMMTWNNGTPTTCV 108

Query: 387 LCESTDETHDHLFFKCDKAMAVWSGI 464
            C S  ET DHLFF+C  +  +W+ I
Sbjct: 109 FCSSPMETRDHLFFQCHYSSEIWTSI 134


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
 Frame = +3

Query: 213  TSEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKYFDIAR--GCV 386
            T   + + R    ++ WYK +W  Y  PK+S  LWL +  RL T DR+K ++  +   C 
Sbjct: 1338 TKVTWNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCT 1397

Query: 387  LCESTDETHDHLFFKCDKAMAVWSGI 464
            LC + +ET DHLFF C     VW  +
Sbjct: 1398 LCNNAEETRDHLFFSCQYTSYVWEAL 1423


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
 Frame = +3

Query: 159  GGNLNDAKAKLGWFAGKGTSEAYEHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRL 338
            G  L+  KAK+ W A             K +K+ W+K +W ++  PK S  +WLA+  +L
Sbjct: 738  GTELSSNKAKVSWEA-----------ICKPKKEAWHKGVWFAHETPKHSFCVWLAIWNKL 786

Query: 339  KTFDRMKYFDI--ARGCVLCESTDETHDHLFFKCDKAMAVWSGI 464
             T  RM+++++  + GCVLC +  ET DHLFF C     +W  +
Sbjct: 787  STGQRMQHWNLQSSVGCVLCNNNLETRDHLFFSCAYTSGIWEAL 830


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
 Frame = +3

Query: 72   DIWEFPYPRRDAPHMTNILRIRDQLISDCGGNLNDAKAKLGWFAGKG--------TSEAY 227
            D W     RR   H T++L   +++++    + +DA+  + W  GK         T + +
Sbjct: 636  DAWTRRSRRR---HRTSLLNEIEEMMAYQRIHHSDAEDTVLW-RGKNDVFKPHFSTRDTW 691

Query: 228  EHFRAKGEKKFWYKAMWRSYIPPKFSVTLWLALHGRLKTFDRMKYFD----IARGCVLCE 395
               +A      W+K +W  +  PK+++  WLA+H RL T DRM  ++    ++  CVLC 
Sbjct: 692  HLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNRLPTGDRMLKWNSSGSVSGNCVLCT 751

Query: 396  STDETHDHLFFKCDKAMAVWSGI 464
            +  +T +HLFF C  A  VW+ +
Sbjct: 752  NNSKTLEHLFFSCSYASTVWAAL 774


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