BLASTX nr result

ID: Mentha22_contig00021183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00021183
         (435 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007011277.1| F-box/RNI-like superfamily protein [Theobrom...    57   2e-06
ref|XP_007011275.1| F-box/RNI-like superfamily protein [Theobrom...    55   8e-06

>ref|XP_007011277.1| F-box/RNI-like superfamily protein [Theobroma cacao]
           gi|508728190|gb|EOY20087.1| F-box/RNI-like superfamily
           protein [Theobroma cacao]
          Length = 185

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = +3

Query: 54  SFSKDPFPGFPALEKLSLRRSITL--YGLVISAPKLRFLEIIQDKLYSEVMEGISAPLLT 227
           +F    F G P LE + L   +T+   GL I A  LR L ++      E    I AP LT
Sbjct: 28  NFEPATFSGCPNLETMQLFDILTVGSEGLCIDADNLRSL-VLSFAFLGEGKVEIYAPRLT 86

Query: 228 SFTYEGYFPLECSNVNLPNLEEVYVNVHKKLGGNSRLNQKQMALKCVSLLQQLRNAKIVA 407
           +F Y G  P+ C   NL +++ VY ++        R N+++  L+ ++ L + R+AK + 
Sbjct: 87  TFKYSGTPPIVCLTDNLASVDYVYFDIKTP---KFRHNEEEYVLRLINTLNEFRHAKSLT 143

Query: 408 LTLDTLKVL 434
           L+  T++VL
Sbjct: 144 LSSSTVQVL 152


>ref|XP_007011275.1| F-box/RNI-like superfamily protein [Theobroma cacao]
           gi|508728188|gb|EOY20085.1| F-box/RNI-like superfamily
           protein [Theobroma cacao]
          Length = 383

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
 Frame = +3

Query: 54  SFSKDPFPGFPALEKLSLRRSITL--YGLVISAPKLRFLEIIQDKLYSEVMEGISAPLLT 227
           +F    F G P LE L L   + +   GL I A KL  L +    L    +E I AP LT
Sbjct: 199 NFEPTAFSGCPNLETLQLFDILAVGSEGLCIDALKLTSLVLSFASLCHGKVE-IYAPRLT 257

Query: 228 SFTYEGYFPLECSNVNLPNLEEVYVNVHKKLGGNSRLNQKQMALKCVSLLQQLRNAKIVA 407
           +F Y G  P+ C   +L ++++VY ++  K  G  R N+++  L+ +  L + R+AK + 
Sbjct: 258 TFKYSGIPPIVCLTDHLASVDDVYFDI--KTPGFKR-NEEESVLRLIKTLNEFRHAKSLT 314

Query: 408 LTLDTLKVL 434
           L+  T++VL
Sbjct: 315 LSSSTVQVL 323


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