BLASTX nr result

ID: Mentha22_contig00018408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00018408
         (361 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU18432.1| hypothetical protein MIMGU_mgv1a000132mg [Mimulus...    57   2e-06
ref|XP_004242685.1| PREDICTED: transcription initiation factor T...    57   4e-06
ref|XP_006420852.1| hypothetical protein CICLE_v100041252mg, par...    56   5e-06
ref|XP_006366188.1| PREDICTED: transcription initiation factor T...    55   8e-06
ref|XP_006366187.1| PREDICTED: transcription initiation factor T...    55   8e-06
ref|XP_006366186.1| PREDICTED: transcription initiation factor T...    55   8e-06

>gb|EYU18432.1| hypothetical protein MIMGU_mgv1a000132mg [Mimulus guttatus]
          Length = 1687

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/112 (33%), Positives = 46/112 (41%)
 Frame = -3

Query: 359  KRRTFERPYEEGNRRGEKLKMIEDQPKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 180
            KRR  ER   E NRR EK+++I+DQP Y                               E
Sbjct: 1583 KRRAAERQQAERNRRVEKMRLIDDQPAYELLRYEVAIRREREEEERKKAHAKKKMKRKAE 1642

Query: 179  IKDDYFDDLPSXXXXXXXXXXXIMVRRRVELDYGKHTPDYAPAIKRRRGGEV 24
            +KDDY DD+P              V RR E++         PA KRRRGGEV
Sbjct: 1643 VKDDYLDDIPPRRNDRRIADRERKVPRRAEIE--------TPATKRRRGGEV 1686


>ref|XP_004242685.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Solanum lycopersicum]
          Length = 1856

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/59 (47%), Positives = 34/59 (57%)
 Frame = -3

Query: 179  IKDDYFDDLPSXXXXXXXXXXXIMVRRRVELDYGKHTPDYAPAIKRRRGGEVGLSNILE 3
            I+DDY DD                V+RR   + G+H  ++AP  KRRRGGEVGLSNILE
Sbjct: 1691 IRDDYLDDFLPRRNDRRIPDRDRSVKRRQTFESGRHAKEHAPPTKRRRGGEVGLSNILE 1749


>ref|XP_006420852.1| hypothetical protein CICLE_v100041252mg, partial [Citrus
           clementina] gi|557522725|gb|ESR34092.1| hypothetical
           protein CICLE_v100041252mg, partial [Citrus clementina]
          Length = 803

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
 Frame = -3

Query: 359 KRRTFERPYEEGNRR--GEKLKMIEDQPKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           KRR  ER  EE  RR   E+ + +E++ ++                              
Sbjct: 571 KRRNAERIKEERARRIYEEERRFVEERERFAELRRYEESIRKEREEELLQKAKKKKKKKK 630

Query: 185 XEIKDDYFDDLPSXXXXXXXXXXXIMVRRRVELDYGKHTPDYAPAIKRRRGGEVGLSNIL 6
            EI DDY  D  +              +R+   + GKH+ DY P  KRRRGGEVGLSNIL
Sbjct: 631 PEIGDDYLQDYRAKRNDRRMPERDRGAKRKPGAELGKHSADYGPPTKRRRGGEVGLSNIL 690

Query: 5   E 3
           E
Sbjct: 691 E 691


>ref|XP_006366188.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
            isoform X3 [Solanum tuberosum]
          Length = 1856

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/59 (45%), Positives = 34/59 (57%)
 Frame = -3

Query: 179  IKDDYFDDLPSXXXXXXXXXXXIMVRRRVELDYGKHTPDYAPAIKRRRGGEVGLSNILE 3
            ++DDY DD                V+RR   + G+H  ++AP  KRRRGGEVGLSNILE
Sbjct: 1690 MRDDYLDDFLPRRNDRRIPDRDRSVKRRQTFESGRHAKEHAPPTKRRRGGEVGLSNILE 1748


>ref|XP_006366187.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
            isoform X2 [Solanum tuberosum]
          Length = 1857

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/59 (45%), Positives = 34/59 (57%)
 Frame = -3

Query: 179  IKDDYFDDLPSXXXXXXXXXXXIMVRRRVELDYGKHTPDYAPAIKRRRGGEVGLSNILE 3
            ++DDY DD                V+RR   + G+H  ++AP  KRRRGGEVGLSNILE
Sbjct: 1692 MRDDYLDDFLPRRNDRRIPDRDRSVKRRQTFESGRHAKEHAPPTKRRRGGEVGLSNILE 1750


>ref|XP_006366186.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
            isoform X1 [Solanum tuberosum]
          Length = 1858

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/59 (45%), Positives = 34/59 (57%)
 Frame = -3

Query: 179  IKDDYFDDLPSXXXXXXXXXXXIMVRRRVELDYGKHTPDYAPAIKRRRGGEVGLSNILE 3
            ++DDY DD                V+RR   + G+H  ++AP  KRRRGGEVGLSNILE
Sbjct: 1692 MRDDYLDDFLPRRNDRRIPDRDRSVKRRQTFESGRHAKEHAPPTKRRRGGEVGLSNILE 1750


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