BLASTX nr result
ID: Mentha22_contig00018380
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00018380
(687 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea] 313 3e-83
ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, I... 302 8e-80
ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V sub... 301 2e-79
ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, I... 293 4e-77
ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, I... 293 4e-77
ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, I... 293 5e-77
ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V sub... 290 2e-76
ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phas... 287 3e-75
ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prun... 287 3e-75
ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri... 287 3e-75
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I... 286 4e-75
ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citr... 284 2e-74
emb|CBI30093.3| unnamed protein product [Vitis vinifera] 282 6e-74
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I... 282 6e-74
ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ... 282 8e-74
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin... 280 2e-73
gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subun... 280 4e-73
gb|AFK43162.1| unknown [Medicago truncatula] 280 4e-73
ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit famil... 279 5e-73
ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Popu... 277 3e-72
>gb|EPS63634.1| hypothetical protein M569_11151 [Genlisea aurea]
Length = 241
Score = 313 bits (802), Expect = 3e-83
Identities = 156/228 (68%), Positives = 186/228 (81%), Gaps = 12/228 (5%)
Frame = -1
Query: 660 EEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDL 481
++ N G+CLSS +D G++ESHRYYLARKTL EML+DRGFA+ +++++LQEFRI+H +
Sbjct: 14 DDENLGTCLSSFVDKGSLESHRYYLARKTLLEMLKDRGFAISPADIDITLQEFRIRHSES 73
Query: 480 PDVDTLRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIVQDG-LSKLMLVVQGKIT 304
P VD L+I++LH DDPSIK LVLFC PGIVKVN +R I + +G +S L+LV Q KIT
Sbjct: 74 PSVDGLKITALHGDDPSIKVLVLFCGPGIVKVNQIRAIAGDVYNNGTISSLILVAQSKIT 133
Query: 303 SQALKAVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIEEKQ---- 136
SQALKAV +L +KVEIFQITDLLVNITKH+LKPKHQ+L+A+EK DLL +YSIEEKQ
Sbjct: 134 SQALKAVNILKFKVEIFQITDLLVNITKHDLKPKHQILSAEEKADLLSKYSIEEKQASKS 193
Query: 135 -------LPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
LPRMLQKDAIARYYGLEKGQVVKVTY GELTQLHVTYRCVW
Sbjct: 194 KKASEAFLPRMLQKDAIARYYGLEKGQVVKVTYGGELTQLHVTYRCVW 241
>ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Solanum lycopersicum]
Length = 227
Score = 302 bits (773), Expect = 8e-80
Identities = 145/225 (64%), Positives = 189/225 (84%), Gaps = 1/225 (0%)
Frame = -1
Query: 684 AMDVDGAGEEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQE 505
AMDVDG N G+CL+S +D GTVESHRY+LAR+T+ EML+DRGFA+PN E++ +LQE
Sbjct: 7 AMDVDGE----NLGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQE 62
Query: 504 FRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLM 328
FR K+G PDV+ LR+S++H++D + K LV+FC P VKVN++R I+++I+ ++ LS+L+
Sbjct: 63 FREKYGQTPDVERLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSRLI 122
Query: 327 LVVQGKITSQALKAVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSI 148
LV+Q ++T+ ALKAVEL +KVEIFQITDLLVNITKH LKP+H++LT EKE LLK+Y++
Sbjct: 123 LVIQNQMTNPALKAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKYNL 182
Query: 147 EEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
EEKQLPRM QKDAIARYYGLEKGQVVKVTY+ E+ + HVTYRCVW
Sbjct: 183 EEKQLPRMSQKDAIARYYGLEKGQVVKVTYSSEIIETHVTYRCVW 227
>ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 301 bits (770), Expect = 2e-79
Identities = 144/225 (64%), Positives = 189/225 (84%), Gaps = 1/225 (0%)
Frame = -1
Query: 684 AMDVDGAGEEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQE 505
AMDVDG N G+CL+S +D GTVESHRY+LAR+T+ EML+DRGFA+PN E++ +LQE
Sbjct: 7 AMDVDGD----NLGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQE 62
Query: 504 FRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLM 328
FR K+G PDV+ LR+S++H++D + K LV+FC P VKVN++R I+++I+ ++ LS+L+
Sbjct: 63 FREKYGQTPDVERLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSRLI 122
Query: 327 LVVQGKITSQALKAVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSI 148
LV+Q ++T+ A+KAVEL +KVEIFQITDLLVNITKH LKP+H++LT EKE LLK+Y++
Sbjct: 123 LVIQNQMTNPAMKAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKYNL 182
Query: 147 EEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
EEKQLPRM QKDAIARYYGLEKGQVVKVTY+ E+ + HVTYRCVW
Sbjct: 183 EEKQLPRMSQKDAIARYYGLEKGQVVKVTYSSEIIETHVTYRCVW 227
>ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 244
Score = 293 bits (750), Expect = 4e-77
Identities = 145/212 (68%), Positives = 178/212 (83%), Gaps = 1/212 (0%)
Frame = -1
Query: 645 GSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDT 466
G CL + ID G+VESHRYYL+R+T EML+DRG+++P E+++SL EFR HG PDVD
Sbjct: 33 GKCLITKIDDGSVESHRYYLSRRTTLEMLKDRGYSIPPSEIQLSLHEFRQTHGHSPDVDR 92
Query: 465 LRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALK 289
LR ++ H +PS + LV+F PGIVKVN+VR I +IV +D L+ L+L+VQ +ITSQALK
Sbjct: 93 LRFTATHTTNPSKRILVIFSGPGIVKVNVVRNIAGQIVNRDTLTGLILIVQSQITSQALK 152
Query: 288 AVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIEEKQLPRMLQKDA 109
AV LL +KVEIFQITDLLVNITKH LKPKHQVLT K+K++LLK+Y+I+EKQLPRMLQ DA
Sbjct: 153 AVNLLSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKKNLLKKYNIQEKQLPRMLQTDA 212
Query: 108 IARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
IARYYGLE+GQVVKVTYTGE+TQ+HVTYRCVW
Sbjct: 213 IARYYGLERGQVVKVTYTGEITQMHVTYRCVW 244
>ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Fragaria vesca subsp. vesca]
Length = 225
Score = 293 bits (750), Expect = 4e-77
Identities = 140/221 (63%), Positives = 185/221 (83%), Gaps = 1/221 (0%)
Frame = -1
Query: 672 DGAGEEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIK 493
+G G+EV G CLS +D G+ ESHRY+L+R+T+ EMLRDRG++VP+ E+++SLQ+FR
Sbjct: 5 NGNGDEVVAGPCLSGFVDDGSTESHRYFLSRRTVLEMLRDRGYSVPSSEIDLSLQDFRSL 64
Query: 492 HGDLPDVDTLRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLMLVVQ 316
HG PD D L S++H DPS + LV++C PGIVKVN++RG+ S+I +D LS L+L++Q
Sbjct: 65 HGQNPDADRLCFSTVHSSDPSERMLVIYCGPGIVKVNVIRGLHSQIANKDTLSGLILILQ 124
Query: 315 GKITSQALKAVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIEEKQ 136
G+ITSQALK ++L P+KVEIFQITDLLVNITKH LKP+HQVLT + K+ LLK+++IEEKQ
Sbjct: 125 GQITSQALKTLDLYPFKVEIFQITDLLVNITKHVLKPQHQVLTEQAKQALLKKFNIEEKQ 184
Query: 135 LPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
LPR+ QKDAIA+YYGLE+GQVVKVTY+G++T+ HVTYRCVW
Sbjct: 185 LPRISQKDAIAKYYGLERGQVVKVTYSGDITKGHVTYRCVW 225
>ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Solanum lycopersicum]
Length = 227
Score = 293 bits (749), Expect = 5e-77
Identities = 142/227 (62%), Positives = 183/227 (80%), Gaps = 4/227 (1%)
Frame = -1
Query: 681 MDVDGAGEEV---NFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSL 511
MDV+G+ EV N CL+S +D GTVESHRY+LARKT+ EML+DRGFA+PN E+E +L
Sbjct: 1 MDVNGSAMEVDVVNVSPCLTSFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIETTL 60
Query: 510 QEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSK 334
QEFR K+G PDV+ LRIS++H+ D + K LV+FC P VK+N++R I+S+I+ ++ LS+
Sbjct: 61 QEFREKYGQRPDVERLRISAMHRTDLTNKVLVIFCGPNSVKMNVIRNILSQIMNKESLSR 120
Query: 333 LMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQY 154
L+L+++ +T+ A+K VE P+K EIFQITDLLVNITKH LKPKH++LT EKE LLK+Y
Sbjct: 121 LILIIENPMTNPAMKVVEDSPFKTEIFQITDLLVNITKHVLKPKHELLTNAEKEQLLKKY 180
Query: 153 SIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
++EEKQLPRM QKDAIARYYGLEKGQVVKVTY E+ + H TYRCVW
Sbjct: 181 NLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYNNEIIETHATYRCVW 227
>ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 290 bits (743), Expect = 2e-76
Identities = 140/227 (61%), Positives = 183/227 (80%), Gaps = 4/227 (1%)
Frame = -1
Query: 681 MDVDGAGEEV---NFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSL 511
MDV+G+ EV N CL+S +D GTVESHRY+LARKT+ EML+DRGFA+PN E++ +L
Sbjct: 1 MDVNGSAMEVDVVNVSPCLASFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIDTTL 60
Query: 510 QEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSK 334
QEFR K+G PD + LRIS++H+ D + K LV+FC P VK+N++R I+S+I+ ++ LS+
Sbjct: 61 QEFREKYGQRPDAERLRISAMHRTDLTNKVLVIFCGPNSVKMNVIRSILSQIMNKESLSR 120
Query: 333 LMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQY 154
L+L+++ +T+ A+K VE P+K EIFQITDLLVNITKH LKPKH++LT EKE LLK+Y
Sbjct: 121 LILIIENPMTNPAMKVVEDSPFKTEIFQITDLLVNITKHVLKPKHELLTNTEKEQLLKKY 180
Query: 153 SIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
++E+KQLPRM QKDAIARYYGLEKGQVVKVTY E+ + HVTYRCVW
Sbjct: 181 NLEDKQLPRMSQKDAIARYYGLEKGQVVKVTYNNEIIETHVTYRCVW 227
>ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phaseolus vulgaris]
gi|561035580|gb|ESW34110.1| hypothetical protein
PHAVU_001G125200g [Phaseolus vulgaris]
Length = 242
Score = 287 bits (734), Expect = 3e-75
Identities = 143/228 (62%), Positives = 181/228 (79%), Gaps = 3/228 (1%)
Frame = -1
Query: 687 EAMDVDGAGEEVN--FGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVS 514
E + +GA +E CLS ID GTVESHRYYL+R+T EML+DRG+++P+ E+++S
Sbjct: 15 ELAEQEGAEQEETEQVKGCLSKFIDDGTVESHRYYLSRRTTLEMLKDRGYSIPSNEIDLS 74
Query: 513 LQEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLS 337
L +FR HG PD D LR+S H +PS + LV+FC PG+VKV +R I +IV +D LS
Sbjct: 75 LSQFRHMHGHSPDPDRLRLSLAHATNPSKRILVIFCGPGVVKVTAIRNIAGQIVNRDTLS 134
Query: 336 KLMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQ 157
L+L+V+ +TSQALKAV L +KVEIFQITDLLVNITKH LKPKHQVLT ++K++LLK+
Sbjct: 135 GLILIVENHVTSQALKAVGLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKKNLLKK 194
Query: 156 YSIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
++IEEKQLPRMLQ DAIARYYGLE+GQVVKVTY+GE+TQ+HVTYRCVW
Sbjct: 195 FNIEEKQLPRMLQTDAIARYYGLERGQVVKVTYSGEITQMHVTYRCVW 242
>ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prunus persica]
gi|462398060|gb|EMJ03728.1| hypothetical protein
PRUPE_ppa010980mg [Prunus persica]
Length = 228
Score = 287 bits (734), Expect = 3e-75
Identities = 134/212 (63%), Positives = 177/212 (83%), Gaps = 1/212 (0%)
Frame = -1
Query: 645 GSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDT 466
G CL+ +D G+ ESHRYYL+R+T+ EM+RDRG++VP+ E+++SLQ+FR HG PDV+
Sbjct: 17 GPCLTGYVDDGSPESHRYYLSRRTVLEMIRDRGYSVPSSEIDLSLQDFRALHGQNPDVER 76
Query: 465 LRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALK 289
LR S+ H+ DPS + +V++C PGIVKVN++RG+ S+I +D L+ L+L+ Q +ITSQALK
Sbjct: 77 LRFSATHRTDPSDRIMVIYCGPGIVKVNVIRGLHSQIANKDTLNGLILITQNQITSQALK 136
Query: 288 AVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIEEKQLPRMLQKDA 109
+EL P+K EIFQITDLLVNITKH LKPKH VLT +EK+ LLK+Y+IEE QLPR+ +KDA
Sbjct: 137 TMELYPFKTEIFQITDLLVNITKHVLKPKHHVLTEQEKQKLLKKYNIEENQLPRLSRKDA 196
Query: 108 IARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
IA+YYGLEKGQVVKVTYTG++T+ HVTYRC+W
Sbjct: 197 IAQYYGLEKGQVVKVTYTGDITESHVTYRCIW 228
>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 238
Score = 287 bits (734), Expect = 3e-75
Identities = 140/212 (66%), Positives = 175/212 (82%), Gaps = 1/212 (0%)
Frame = -1
Query: 645 GSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDT 466
G C SS D GT E+HRYYL+R+T+ EMLRDRG++VP+ E+++SLQEFR HG PD+D
Sbjct: 27 GKCFSSYADDGTHETHRYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGPNPDIDR 86
Query: 465 LRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALK 289
L+ S+ H DPS + LVLF PGI+KV+ +R I +IV +D L+ L+LV+Q +IT+QA+K
Sbjct: 87 LKFSATHTSDPSKRMLVLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQITNQAMK 146
Query: 288 AVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIEEKQLPRMLQKDA 109
AV+L +KVE+FQITDLLVNITKH LKPKHQVLT +EK+ LLK Y IEEKQLPR+L+KDA
Sbjct: 147 AVDLFKFKVEMFQITDLLVNITKHVLKPKHQVLTDREKQKLLKDYCIEEKQLPRLLRKDA 206
Query: 108 IARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
IARYYGLEKGQVVKVTY+GE+T+ HVTYRCVW
Sbjct: 207 IARYYGLEKGQVVKVTYSGEITESHVTYRCVW 238
>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
[Cucumis sativus]
Length = 227
Score = 286 bits (732), Expect = 4e-75
Identities = 143/227 (62%), Positives = 177/227 (77%), Gaps = 4/227 (1%)
Frame = -1
Query: 681 MDVDGAGEEVN---FGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSL 511
M+ DG E N FG+CLSS ID GT ESHRY+L+R+T+ EML+DRG+ + + ++ SL
Sbjct: 1 MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSL 60
Query: 510 QEFRIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSK 334
Q+FR G PDVD L++S+ H DPS + LV+FC G VKVN +R I +I +D L
Sbjct: 61 QQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHG 120
Query: 333 LMLVVQGKITSQALKAVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQY 154
L+L+VQ +IT+QA+KAVEL +KVEIFQITDLLVNITKH LKP HQVLT +EK+ LLKQY
Sbjct: 121 LILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQY 180
Query: 153 SIEEKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
SIEEKQLPRML+ DAIARYYGLEKGQVVKVTY G++T+ H+TYRCVW
Sbjct: 181 SIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHITYRCVW 227
>ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
gi|568879109|ref|XP_006492520.1| PREDICTED: DNA-directed
RNA polymerase V subunit 5A-like isoform X1 [Citrus
sinensis] gi|557544341|gb|ESR55319.1| hypothetical
protein CICLE_v10021999mg [Citrus clementina]
Length = 236
Score = 284 bits (726), Expect = 2e-74
Identities = 142/211 (67%), Positives = 177/211 (83%), Gaps = 1/211 (0%)
Frame = -1
Query: 642 SCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTL 463
SCLS +D G+ +S RYYL+R+T+ EML+DRG+AV E+ +S+Q+FR +G PDVD L
Sbjct: 26 SCLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIYGQDPDVDRL 85
Query: 462 RISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKA 286
RIS H+ DPS + LV+FC PGIVKVN++R IIS+IV +D L+ L+L++Q +ITSQA KA
Sbjct: 86 RISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIVNRDTLTGLILILQNQITSQATKA 145
Query: 285 VELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIEEKQLPRMLQKDAI 106
V L +KVE+FQITDLLVNITKH LKPKHQVLT +EKE LLK+YSIEEKQLPRML+KDAI
Sbjct: 146 VGLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKLLKKYSIEEKQLPRMLKKDAI 205
Query: 105 ARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
A+YYGLE+GQVVKVTY+GE+T+ HVTYRCVW
Sbjct: 206 AQYYGLERGQVVKVTYSGEITESHVTYRCVW 236
>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 282 bits (722), Expect = 6e-74
Identities = 140/210 (66%), Positives = 171/210 (81%), Gaps = 1/210 (0%)
Frame = -1
Query: 639 CLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLR 460
CLSS +D G +ESHRYYLAR+TL EMLRDRG+++P ++++SLQ+FR + PD D LR
Sbjct: 121 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180
Query: 459 ISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAV 283
IS+ + DPS K LV+FC P +VKVN +R I ++IV +D LSKL+LV+Q ITSQALKAV
Sbjct: 181 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 240
Query: 282 ELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIA 103
+L ++VE FQITDLLVNITKH LKPKH+VLT +EK LLK+YS+ EKQLPRMLQ+DAIA
Sbjct: 241 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 300
Query: 102 RYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
RYYGLEKGQVVKV Y GE+T HVTYRCVW
Sbjct: 301 RYYGLEKGQVVKVIYNGEITGSHVTYRCVW 330
>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Vitis vinifera]
Length = 229
Score = 282 bits (722), Expect = 6e-74
Identities = 140/210 (66%), Positives = 171/210 (81%), Gaps = 1/210 (0%)
Frame = -1
Query: 639 CLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLR 460
CLSS +D G +ESHRYYLAR+TL EMLRDRG+++P ++++SLQ+FR + PD D LR
Sbjct: 20 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 79
Query: 459 ISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAV 283
IS+ + DPS K LV+FC P +VKVN +R I ++IV +D LSKL+LV+Q ITSQALKAV
Sbjct: 80 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 139
Query: 282 ELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIA 103
+L ++VE FQITDLLVNITKH LKPKH+VLT +EK LLK+YS+ EKQLPRMLQ+DAIA
Sbjct: 140 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 199
Query: 102 RYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
RYYGLEKGQVVKV Y GE+T HVTYRCVW
Sbjct: 200 RYYGLEKGQVVKVIYNGEITGSHVTYRCVW 229
>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Medicago truncatula] gi|124359979|gb|ABN07995.1| RNA
polymerase subunit, RPB5; RNA polymerase Rpb5,
N-terminal [Medicago truncatula]
gi|355500048|gb|AES81251.1| DNA-directed RNA polymerases
I, II, and III subunit RPABC1 [Medicago truncatula]
Length = 248
Score = 282 bits (721), Expect = 8e-74
Identities = 138/210 (65%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Frame = -1
Query: 639 CLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLR 460
CL + D G++ESHRYYL+R+T+ EML+DRG+++P+ E+++SL +FR HG PDVD LR
Sbjct: 39 CLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLR 98
Query: 459 ISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAV 283
+++ H +PS + LV+F PGIVKVN VR I +IV ++ L+ L+L+VQ +ITSQALKAV
Sbjct: 99 LTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAV 158
Query: 282 ELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIA 103
LL +KVEIFQITDLLVN TKH LKPKHQVLT K+K++LLK+Y I+EKQLPRMLQ DAIA
Sbjct: 159 NLLSFKVEIFQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAIA 218
Query: 102 RYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
RYYGL++GQVVKVTYTGE+TQ+HVTYRCVW
Sbjct: 219 RYYGLQRGQVVKVTYTGEITQMHVTYRCVW 248
>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
gi|255627335|gb|ACU14012.1| unknown [Glycine max]
Length = 237
Score = 280 bits (717), Expect = 2e-73
Identities = 136/210 (64%), Positives = 171/210 (81%), Gaps = 1/210 (0%)
Frame = -1
Query: 639 CLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLR 460
CLS +D G+VESHRYYL+R+T EML+DRG+++P+ E+++SL +FR HG PD D LR
Sbjct: 28 CLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQFPDPDRLR 87
Query: 459 ISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAV 283
+S H + S + LV+FC PG+VKV +R +I+ +D L+ L+L+V+ ITSQALKAV
Sbjct: 88 LSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHITSQALKAV 147
Query: 282 ELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIA 103
L +KVEIFQITDLLVNITKH LKPKHQVLT K+K +LLK+Y+IEEKQLPRMLQ DAIA
Sbjct: 148 NLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKINLLKKYNIEEKQLPRMLQTDAIA 207
Query: 102 RYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
RYYGLE+GQVVKVTY+GE+TQ+HVTYRCVW
Sbjct: 208 RYYGLERGQVVKVTYSGEVTQMHVTYRCVW 237
>gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 231
Score = 280 bits (715), Expect = 4e-73
Identities = 140/223 (62%), Positives = 179/223 (80%), Gaps = 4/223 (1%)
Frame = -1
Query: 669 GAGEEVN---FGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFR 499
G G E N G+CLSSLID G+VESHRY+L+R TL EML+DRG++VP+ ++ +SL +FR
Sbjct: 9 GGGGEPNGETLGTCLSSLIDKGSVESHRYFLSRITLLEMLKDRGYSVPSSDINLSLHDFR 68
Query: 498 IKHGDLPDVDTLRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLMLV 322
+G +PDVD LR S H DPS + LV+FC PG+VKV VRGI +IV ++ L+ L+LV
Sbjct: 69 QIYGQIPDVDRLRFSVTHLSDPSKRILVIFCEPGVVKVTSVRGIAGQIVNRNTLTGLILV 128
Query: 321 VQGKITSQALKAVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIEE 142
+Q ++T+QA KAVELLP+KVEIFQITDLL+NITKH L+PKH+VLT +EK+ LLK+YSIE
Sbjct: 129 LQSQMTNQAQKAVELLPFKVEIFQITDLLINITKHLLRPKHRVLTDQEKQKLLKKYSIEV 188
Query: 141 KQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
KQLPRM + DAIARYYGLEKGQVVK+ Y+G +T ++TYRCVW
Sbjct: 189 KQLPRMSKNDAIARYYGLEKGQVVKIIYSGGITDSYITYRCVW 231
>gb|AFK43162.1| unknown [Medicago truncatula]
Length = 248
Score = 280 bits (715), Expect = 4e-73
Identities = 137/210 (65%), Positives = 175/210 (83%), Gaps = 1/210 (0%)
Frame = -1
Query: 639 CLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDVDTLR 460
CL + D G++ESHRYYL+R+T+ EML+DRG+++P+ E+++SL +FR HG PDVD LR
Sbjct: 39 CLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLR 98
Query: 459 ISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQALKAV 283
+++ H +PS + LV+F PGIVKVN VR I +IV ++ L+ L+L+VQ +ITSQALKAV
Sbjct: 99 LTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAV 158
Query: 282 ELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIEEKQLPRMLQKDAIA 103
LL +KVEI QITDLLVN TKH LKPKHQVLT K+K++LLK+Y I+EKQLPRMLQ DAIA
Sbjct: 159 NLLSFKVEILQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAIA 218
Query: 102 RYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
RYYGL++GQVVKVTYTGE+TQ+HVTYRCVW
Sbjct: 219 RYYGLQRGQVVKVTYTGEITQMHVTYRCVW 248
>ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao] gi|508717149|gb|EOY09046.1| Eukaryotic
rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 228
Score = 279 bits (714), Expect = 5e-73
Identities = 141/224 (62%), Positives = 178/224 (79%), Gaps = 1/224 (0%)
Frame = -1
Query: 681 MDVDGAGEEVNFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEF 502
++ DG+ E G CLS ++D G+ ESHRYYL+R+T+ EMLRDRG+AVP E+ +SLQEF
Sbjct: 6 LEGDGSNGEA-LGKCLSGVVDDGSTESHRYYLSRRTVLEMLRDRGYAVPISEINLSLQEF 64
Query: 501 RIKHGDLPDVDTLRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLML 325
R +G PD D LR+S+ HK DPS + LV+F PG+VKV+ +R I I ++ L+ L+L
Sbjct: 65 RAIYGQSPDFDRLRLSATHKTDPSKRILVVFYGPGMVKVSGIRLIAGLITNKESLTGLIL 124
Query: 324 VVQGKITSQALKAVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIE 145
V+Q IT+QALKA++L +KVEIFQITDLLVNITKH LKPKHQVLT +EK+ LL++YSIE
Sbjct: 125 VLQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPKHQVLTEQEKQKLLQKYSIE 184
Query: 144 EKQLPRMLQKDAIARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
EKQLPR+L+KDAIARYYG E+GQVVKV Y GE+TQ HVTYRCVW
Sbjct: 185 EKQLPRLLKKDAIARYYGYERGQVVKVMYDGEITQSHVTYRCVW 228
>ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Populus trichocarpa]
gi|550320761|gb|EEF05018.2| hypothetical protein
POPTR_0016s03800g [Populus trichocarpa]
Length = 243
Score = 277 bits (708), Expect = 3e-72
Identities = 132/214 (61%), Positives = 176/214 (82%), Gaps = 1/214 (0%)
Frame = -1
Query: 651 NFGSCLSSLIDTGTVESHRYYLARKTLFEMLRDRGFAVPNCEVEVSLQEFRIKHGDLPDV 472
+ G CLSS +D G+ ESHRYYL+R+T+ EML+DRG++VP+ E+++SLQ+FR +G PD+
Sbjct: 30 SLGRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDI 89
Query: 471 DTLRISSLHKDDPSIKALVLFCPPGIVKVNMVRGIISRIV-QDGLSKLMLVVQGKITSQA 295
+ L+ S+ HK DPS + LV+FC G+VKV M+R I +I +D L+ L+LV+Q IT+QA
Sbjct: 90 ELLKFSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQA 149
Query: 294 LKAVELLPYKVEIFQITDLLVNITKHELKPKHQVLTAKEKEDLLKQYSIEEKQLPRMLQK 115
+KA++L +K+EIFQITDLLVNITKH LKPKHQVL+ + K+ LLK+YSIEEKQLPR+L+K
Sbjct: 150 MKALDLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSIEEKQLPRLLKK 209
Query: 114 DAIARYYGLEKGQVVKVTYTGELTQLHVTYRCVW 13
DAI+RYYGLE+GQVVKVTY G++T HVTYRCVW
Sbjct: 210 DAISRYYGLERGQVVKVTYDGDITGSHVTYRCVW 243