BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00017258
         (1227 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU25758.1| hypothetical protein MIMGU_mgv1a006671mg [Mimulus...   559   e-157
gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]       459   e-127
gb|EYU25759.1| hypothetical protein MIMGU_mgv1a006671mg [Mimulus...   429   e-119
ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-lik...   433   e-119
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik...   432   e-118
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik...   431   e-118
ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592...   431   e-118
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...   431   e-118
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...   428   e-117
ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma ...   427   e-117
ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma ...   422   e-115
emb|CBI33811.3| unnamed protein product [Vitis vinifera]              419   e-115
ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622...   416   e-113
ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citr...   416   e-113
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu...   412   e-112
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [...   410   e-112
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]        408   e-111
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi...   407   e-111
ref|XP_007160215.1| hypothetical protein PHAVU_002G302500g [Phas...   406   e-110
ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-lik...   405   e-110

>gb|EYU25758.1| hypothetical protein MIMGU_mgv1a006671mg [Mimulus guttatus]
          Length = 435

 Score =  559 bits (1441), Expect = e-157
 Identities = 267/380 (70%), Positives = 312/380 (82%), Gaps = 3/380 (0%)
 Frame = +3

Query: 42   MIKQPGTAAV-LRLRNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYARPWHRV 218
            MIKQP  AA  LRLRNLME+ APPPP+ Y+ YQH DACSL RW A+ESY+FMY +PW +V
Sbjct: 1    MIKQPAAAAAGLRLRNLMENSAPPPPKGYIHYQHNDACSLSRWNAKESYQFMYEKPWQKV 60

Query: 219  NDFYLDAVNGRRSLPQLFGKEVNT-NDGAEIIDDSDKPESECVPAKGRTGRWERVTFKIL 395
            NDFYLD VNGRRS+ +LF +E    +DGAE I+D DKP+   V AK R+GRW RVTFKI 
Sbjct: 61   NDFYLDVVNGRRSVSELFERETYAVHDGAETIEDCDKPDLMSVRAKDRSGRWARVTFKIR 120

Query: 396  ISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKG 575
            +SY+G+SFDGWQKQP LNTVQGL+E +LGKFVDE KAQ+LKEKKLP++ C  VAGRTDKG
Sbjct: 121  LSYHGSSFDGWQKQPGLNTVQGLIEKSLGKFVDEDKAQMLKEKKLPVDCCVTVAGRTDKG 180

Query: 576  VTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYI 755
            VTAL Q C+FYTWRKD+K +DIEDA+   APGKIR  SVSQV+RDFHPNFSAKWR Y YI
Sbjct: 181  VTALEQFCSFYTWRKDIKTVDIEDAINGVAPGKIRAISVSQVTRDFHPNFSAKWRRYLYI 240

Query: 756  FPFNDENEDDEVSECKKHNLDKTICHDDQYGERLGEQTCKDEDDDYVQTQ-QSGTKPFTF 932
            FPF+DEN DDE S+C+K+ LD  +CHD +YGE  G + C +E DDY QT+ Q+G KP +F
Sbjct: 241  FPFDDENVDDEASQCEKNVLDSDVCHDGRYGELPGVENCGNEIDDYEQTETQTGHKPLSF 300

Query: 933  EVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSK 1112
            +VS VN LLH LEGKLLSFRMFARDTKASRNIGPPTECF+ H+RA+EAY+ CPK G  SK
Sbjct: 301  DVSCVNRLLHHLEGKLLSFRMFARDTKASRNIGPPTECFIFHSRASEAYIRCPKEGTRSK 360

Query: 1113 VMCVELVANRFLRKMVRVLV 1172
            +MC+ELVANRFLRKMVRVLV
Sbjct: 361  IMCIELVANRFLRKMVRVLV 380


>gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]
          Length = 406

 Score =  459 bits (1182), Expect = e-127
 Identities = 236/371 (63%), Positives = 280/371 (75%), Gaps = 4/371 (1%)
 Frame = +3

Query: 72   LRLRNLMESPAPP---PPRDYVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAV 242
            +RLRNLME  A P   P +DYV YQH DA SL RWTA+ESY+FMY+RPW RVN FYL+ V
Sbjct: 1    MRLRNLMEGAALPSHTPAKDYVHYQHNDAFSLCRWTAKESYQFMYSRPWQRVNCFYLELV 60

Query: 243  NGRRSLPQLFGKEVNT-NDGAEIIDDSDKPESECVPAKGRTGRWERVTFKILISYNGNSF 419
            NGRR+L +LF KE +  +D    +D  + P S  +P + RTGRW R+TFKI++SY+G SF
Sbjct: 61   NGRRTLSELFPKEKHAIHDTDRTLDVYNYP-SASLPNEQRTGRWARLTFKIILSYHGYSF 119

Query: 420  DGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVC 599
            DGWQKQP LNTVQGL+E++LG F+DEKKA  LKEK LP +GCA+VAGRTDKGV+ALGQVC
Sbjct: 120  DGWQKQPGLNTVQGLIENSLGVFIDEKKALQLKEKNLPRDGCAVVAGRTDKGVSALGQVC 179

Query: 600  AFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENE 779
            +FYTWRK+V+A DI +A+  +APGK+RVTSVSQVSR+FHPNFSAKWR Y YIFP N E  
Sbjct: 180  SFYTWRKEVEAEDIMEAINDSAPGKLRVTSVSQVSREFHPNFSAKWRRYLYIFPLNHEYR 239

Query: 780  DDEVSECKKHNLDKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNHLL 959
            D E  + +K++     C DDQ G                   Q+G KP  FEVSRV+ LL
Sbjct: 240  DREAFKSEKNDFCGDNCLDDQSG------------------MQTGCKPLNFEVSRVSQLL 281

Query: 960  HQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVAN 1139
              LEGKLLSFRMFARDTKASR+IGPPTECF+ HARAAEAYLPC +    SK+MCVELVA+
Sbjct: 282  LHLEGKLLSFRMFARDTKASRSIGPPTECFIFHARAAEAYLPCSEEETKSKIMCVELVAD 341

Query: 1140 RFLRKMVRVLV 1172
            RFLRKMVRVLV
Sbjct: 342  RFLRKMVRVLV 352


>gb|EYU25759.1| hypothetical protein MIMGU_mgv1a006671mg [Mimulus guttatus]
          Length = 333

 Score =  429 bits (1102), Expect(2) = e-119
 Identities = 205/310 (66%), Positives = 246/310 (79%), Gaps = 3/310 (0%)
 Frame = +3

Query: 42  MIKQPGTAAV-LRLRNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYARPWHRV 218
           MIKQP  AA  LRLRNLME+ APPPP+ Y+ YQH DACSL RW A+ESY+FMY +PW +V
Sbjct: 1   MIKQPAAAAAGLRLRNLMENSAPPPPKGYIHYQHNDACSLSRWNAKESYQFMYEKPWQKV 60

Query: 219 NDFYLDAVNGRRSLPQLFGKEVNT-NDGAEIIDDSDKPESECVPAKGRTGRWERVTFKIL 395
           NDFYLD VNGRRS+ +LF +E    +DGAE I+D DKP+   V AK R+GRW RVTFKI 
Sbjct: 61  NDFYLDVVNGRRSVSELFERETYAVHDGAETIEDCDKPDLMSVRAKDRSGRWARVTFKIR 120

Query: 396 ISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKG 575
           +SY+G+SFDGWQKQP LNTVQGL+E +LGKFVDE KAQ+LKEKKLP++ C  VAGRTDKG
Sbjct: 121 LSYHGSSFDGWQKQPGLNTVQGLIEKSLGKFVDEDKAQMLKEKKLPVDCCVTVAGRTDKG 180

Query: 576 VTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYI 755
           VTAL Q C+FYTWRKD+K +DIEDA+   APGKIR  SVSQV+RDFHPNFSAKWR Y YI
Sbjct: 181 VTALEQFCSFYTWRKDIKTVDIEDAINGVAPGKIRAISVSQVTRDFHPNFSAKWRRYLYI 240

Query: 756 FPFNDENEDDEVSECKKHNLDKTICHDDQYGERLGEQTCKDEDDDYVQTQ-QSGTKPFTF 932
           FPF+DEN DDE S+C+K+ LD  +CHD +YGE  G + C +E DDY QT+ Q+G KP +F
Sbjct: 241 FPFDDENVDDEASQCEKNVLDSDVCHDGRYGELPGVENCGNEIDDYEQTETQTGHKPLSF 300

Query: 933 EVSRVNHLLH 962
           + S  N +L+
Sbjct: 301 DWS-TNRVLY 309



 Score = 28.1 bits (61), Expect(2) = e-119
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 1028 WSTNRVLCPSCPSCRGLFTMP*GWSRQQGNV 1120
            WSTNRVL       RGL+T+  G +  + NV
Sbjct: 302  WSTNRVLYLPFTGFRGLYTLSKGGNSLEDNV 332


>ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
          Length = 436

 Score =  433 bits (1113), Expect = e-119
 Identities = 230/398 (57%), Positives = 277/398 (69%), Gaps = 21/398 (5%)
 Frame = +3

Query: 42   MIKQPGTAAVLRLRNLMESPAPPPPRDYVQ--YQHTDACSLHRWTARESYEFMYARPWHR 215
            M++ P T  V  LRNLME+ +P   +  V   Y HTD+C   RWT+RE YEFMYARPWH+
Sbjct: 1    MLRYPTT--VRTLRNLMENSSPTATQQKVHFHYNHTDSCKFSRWTSRECYEFMYARPWHK 58

Query: 216  VNDFYLDAVNGRRSLPQLFGKEVNTN-DGAEIIDDSDKPESECVPAKGRT----GRWERV 380
            V DFY D V G  SL  LFGKE   + + AEI +D +K E   +P K ++    GRW R 
Sbjct: 59   VVDFYADMVKGHISLSGLFGKETPADHEDAEIREDHEKSELVNIPVKDKSRDKSGRWARA 118

Query: 381  TFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAG 560
             F I++SY+G SFDGWQKQP LNTVQGLVE +LG+FVDEKKAQ+LK+K LPLE CALVAG
Sbjct: 119  NFMIVLSYHGGSFDGWQKQPDLNTVQGLVERSLGEFVDEKKAQLLKDKNLPLEACALVAG 178

Query: 561  RTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWR 740
            RTDKGV+A  QVC+FYTWRKDVK  D++ AL  AAPGKIRV S+++VSR+FHPNFSAKWR
Sbjct: 179  RTDKGVSASQQVCSFYTWRKDVKIEDVKAALDKAAPGKIRVVSLTKVSREFHPNFSAKWR 238

Query: 741  HYFYIFPFND---ENEDDEV-----------SECKKHNLDKTICHDDQYGERLGEQTCKD 878
            HY YIFP +D   E +  ++           +EC K ++DK+  ++             +
Sbjct: 239  HYLYIFPIDDVLGEKQGGQIWIDDSTNVHQQNECDKSDVDKSNVNE-----------INN 287

Query: 879  EDDDYVQTQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHH 1058
            E+D  V     G KP  FEV +VN LL QLEGKLLS++MFARDTKASRNIGPPTECFV H
Sbjct: 288  ENDKLVH----GNKPTKFEVGKVNRLLGQLEGKLLSYKMFARDTKASRNIGPPTECFVFH 343

Query: 1059 ARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLV 1172
            ARA E  +PC K G   K MC+ELVANRFLRKMVRVLV
Sbjct: 344  ARAIETSIPCAKDGSHMKTMCIELVANRFLRKMVRVLV 381


>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  432 bits (1112), Expect = e-118
 Identities = 233/386 (60%), Positives = 269/386 (69%), Gaps = 7/386 (1%)
 Frame = +3

Query: 36   RGMIKQPGTAAVLRLRNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYARPWHR 215
            R  +  P +A    L+ LME+ A    +DY+ Y HTD C   RWTARESY+FMY RPW  
Sbjct: 6    RARLVSPSSAG-FGLKILMENRAQR--KDYLHYNHTDRCRSARWTARESYQFMYGRPWQE 62

Query: 216  VNDFYLDAVNGRRSLPQLFGKEV-NTNDGAEIIDDSDKPESECVPAKGRTGRWERVTFKI 392
            V DFY  AVNGR SL  L G E+   +D AE     +  E      K +TGRW R TFKI
Sbjct: 63   VLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATFKI 122

Query: 393  LISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDK 572
            ++SY+GNSFDGWQKQP LNTVQGLVE +LGKFVDEKKAQ+LK+K LPLEGCALVAGRTDK
Sbjct: 123  VLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDK 182

Query: 573  GVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFY 752
            GVTAL QVC+FYTWR DVK  DIED++ +AAPGK+R +SVSQVSR FHPNFSAKWR Y Y
Sbjct: 183  GVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLY 242

Query: 753  IFPFNDENEDDEVSECKKHNLDKTICHDDQYGERLGEQTCKDEDDDYV------QTQQSG 914
            I P ND  E+ E       N++     +    E    + C D   D +      Q   S 
Sbjct: 243  ILPLND-GENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPNDQELVSA 301

Query: 915  TKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPK 1094
             KP TF ++RVN LL +LEGKLLS++MFARDTKASRN GPPTECFV+HARAAE  LPC +
Sbjct: 302  DKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLE 361

Query: 1095 GGVGSKVMCVELVANRFLRKMVRVLV 1172
             GVG  VMCVELVANRFLRKMVRVLV
Sbjct: 362  QGVGRSVMCVELVANRFLRKMVRVLV 387


>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  431 bits (1109), Expect = e-118
 Identities = 232/386 (60%), Positives = 269/386 (69%), Gaps = 7/386 (1%)
 Frame = +3

Query: 36   RGMIKQPGTAAVLRLRNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYARPWHR 215
            R  +  P +A    L+ LME+ A    +DY+ Y HTD C   RWTARESY+FMY RPW  
Sbjct: 6    RARLVSPSSAG-FGLKILMENRAQR--KDYLHYNHTDRCRSARWTARESYQFMYGRPWQE 62

Query: 216  VNDFYLDAVNGRRSLPQLFGKEV-NTNDGAEIIDDSDKPESECVPAKGRTGRWERVTFKI 392
            V DFY  AVNGR SL  L G E+   +D AE     +  E      K +TGRW R TFKI
Sbjct: 63   VLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATFKI 122

Query: 393  LISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDK 572
            ++SY+GNSFDGWQKQP LNTVQGLVE +LGKFVDEKKAQ+LK+K LPLEGCALVAGRTDK
Sbjct: 123  VLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDK 182

Query: 573  GVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFY 752
            GVTAL QVC+FYTWR DVK  DIED++ +AAPGK+R +SVSQVSR FHPNFSAKWR Y Y
Sbjct: 183  GVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLY 242

Query: 753  IFPFNDENEDDEVSECKKHNLDKTICHDDQYGERLGEQTCKDEDDDYV------QTQQSG 914
            I P ND  E+ E       N++     +    E    + C D   D +      +   S 
Sbjct: 243  ILPLND-GENMEPDSTTWENVENREEENFVKIEASNGEKCVDGIHDNLVLSPNDEELVSA 301

Query: 915  TKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPK 1094
             KP TF ++RVN LL +LEGKLLS++MFARDTKASRN GPPTECFV+HARAAE  LPC +
Sbjct: 302  DKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLE 361

Query: 1095 GGVGSKVMCVELVANRFLRKMVRVLV 1172
             GVG  VMCVELVANRFLRKMVRVLV
Sbjct: 362  QGVGRSVMCVELVANRFLRKMVRVLV 387


>ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592314 [Solanum tuberosum]
          Length = 436

 Score =  431 bits (1108), Expect = e-118
 Identities = 228/398 (57%), Positives = 276/398 (69%), Gaps = 21/398 (5%)
 Frame = +3

Query: 42   MIKQPGTAAVLRLRNLMESPAPPPPRDYVQ--YQHTDACSLHRWTARESYEFMYARPWHR 215
            M++ P T  V  LRNLME+P+    +  V   Y HTD+C   RWT+RE YEFMYAR WH+
Sbjct: 1    MLRYPTT--VRTLRNLMENPSQTAAQQKVHFHYNHTDSCKFSRWTSRECYEFMYARLWHK 58

Query: 216  VNDFYLDAVNGRRSLPQLFGKEVNTN-DGAEIIDDSDKPESECVPAKGRT----GRWERV 380
            V DFY D V G  SL +LFGKE   + + AEI +D +K E   +P K ++    GRW R 
Sbjct: 59   VVDFYADMVKGHTSLSRLFGKETPADHEDAEIREDHEKSELVNIPVKDKSRDKSGRWARA 118

Query: 381  TFKILISYNGNSFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAG 560
             F I++SY+G SFDGWQKQP LNTVQGLVE +LG+FVDEKKAQ+LK+K LPLE CALVAG
Sbjct: 119  NFMIVLSYHGGSFDGWQKQPDLNTVQGLVERSLGEFVDEKKAQLLKDKNLPLEACALVAG 178

Query: 561  RTDKGVTALGQVCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWR 740
            RTDKGV+A  QVC+FYTWRKDVK  D++ AL  AAPGKIRV S+++VSR+FHPNFSAKWR
Sbjct: 179  RTDKGVSASQQVCSFYTWRKDVKIEDVKAALDKAAPGKIRVVSLTKVSREFHPNFSAKWR 238

Query: 741  HYFYIFPFND--------------ENEDDEVSECKKHNLDKTICHDDQYGERLGEQTCKD 878
            HY YIFP +D                +  + +EC K ++DK+  ++             D
Sbjct: 239  HYLYIFPIDDVLGEKQRGQIWIDGSTDVHQQNECGKSDIDKSNVNE-----------IND 287

Query: 879  EDDDYVQTQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHH 1058
            E+++ V     G KP  FEV +VN LL QLEGKLLS++MFARDTKASRNIGPPTECFV H
Sbjct: 288  ENNELVH----GNKPTKFEVGKVNRLLGQLEGKLLSYKMFARDTKASRNIGPPTECFVFH 343

Query: 1059 ARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLV 1172
            ARA E  +PC K G   K MC+ELVANRFLRKMVRVLV
Sbjct: 344  ARAIETSIPCAKDGSLMKTMCIELVANRFLRKMVRVLV 381


>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 443

 Score =  431 bits (1107), Expect = e-118
 Identities = 220/376 (58%), Positives = 270/376 (71%), Gaps = 10/376 (2%)
 Frame = +3

Query: 75   RLRNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRR 254
            ++  L ++      + Y  Y HTD+C   RWTARES++FMYARPW  V+DFY + VNGR 
Sbjct: 18   QMEKLTQTETKTQNKIYFHYNHTDSCKSFRWTARESFQFMYARPWQEVSDFYSNVVNGRL 77

Query: 255  SLPQLFGKEVN-TNDGAEIIDDSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQ 431
            S  +LF  +++   D A+I +DS+K E E    + R GRW RV FKI +SY+G SFDGWQ
Sbjct: 78   SFLELFRSQMHFVRDDAKIQEDSNKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQ 137

Query: 432  KQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYT 611
            KQP LNTVQGLVE +LGKFVDEKKAQ LKE   PLEGCA+VAGRTDKGV+AL QVC+FYT
Sbjct: 138  KQPGLNTVQGLVEKSLGKFVDEKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYT 197

Query: 612  WRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFND------- 770
            WRKDV+  +IEDA+ ++APGKIRV SVS+VSR FHPNFSAKWR Y YIFP ND       
Sbjct: 198  WRKDVRPHEIEDAINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQS 257

Query: 771  -ENED-DEVSECKKHNLDKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSR 944
             ++ED + +   +K++  +  C +    E + E    D+D+      +   KP  F + R
Sbjct: 258  FDSEDLENLRSYEKYDEQRNGCAELTSEEHVEELITSDKDE-----LEGAKKPRIFSICR 312

Query: 945  VNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCV 1124
            VN LL QLEGKLLS+++FARDTKASRN+GPPTECF++HARA EA LPCP  G G KVMCV
Sbjct: 313  VNQLLQQLEGKLLSYKIFARDTKASRNVGPPTECFIYHARATEARLPCPDHGEGRKVMCV 372

Query: 1125 ELVANRFLRKMVRVLV 1172
            ELVANRFLRKMVRVLV
Sbjct: 373  ELVANRFLRKMVRVLV 388


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score =  428 bits (1101), Expect = e-117
 Identities = 225/377 (59%), Positives = 273/377 (72%), Gaps = 13/377 (3%)
 Frame = +3

Query: 81   RNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSL 260
            R+LME+      + YV Y HT      RWTARES++FMY RPW +V DFY + V GR SL
Sbjct: 11   RDLMENEKEN--KVYVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSL 68

Query: 261  PQLFGKEVNTNDGAEIIDDSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQP 440
              L G E +     EI++ SDK E   V  K R GRW R+TFKI++SY+G SFDGWQKQP
Sbjct: 69   LGLLGIETHPIHDGEIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQP 128

Query: 441  SLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRK 620
             LNTVQGLVE++LG+FVDE+KAQ LKEK LP+EG   VAGRTDKGVTAL QVC+FYTW+K
Sbjct: 129  GLNTVQGLVEASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKK 188

Query: 621  DVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSEC 800
            DVK  DIEDA+  AAPGK+RV SVS+VSR FHPNFSAKWRHYFYIFP ND ++ +++SE 
Sbjct: 189  DVKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISE- 247

Query: 801  KKHNLD-KTICHDDQYGERLGEQTCK------------DEDDDYVQTQQSGTKPFTFEVS 941
              + +D + I  +++YGE+  E   +            D+D ++    +S  KP TF +S
Sbjct: 248  --NEMDIQKISFNEKYGEQGSECPAQYNGGENTENLIFDDDGEF----ESRKKPSTFSIS 301

Query: 942  RVNHLLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMC 1121
            RV+ LL QLEGKLLS+++FARDTKASRNIGPPTECFV HARA EA L     G G+KVMC
Sbjct: 302  RVDQLLRQLEGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARLQFSDDGEGTKVMC 361

Query: 1122 VELVANRFLRKMVRVLV 1172
            +ELVANRFLRKMVRVLV
Sbjct: 362  IELVANRFLRKMVRVLV 378


>ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
            gi|508784930|gb|EOY32186.1| Pseudouridine synthase
            isoform 1 [Theobroma cacao]
          Length = 444

 Score =  427 bits (1097), Expect = e-117
 Identities = 219/358 (61%), Positives = 261/358 (72%), Gaps = 8/358 (2%)
 Frame = +3

Query: 123  YVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGA 302
            YV Y H+D+CS  RWTARESY FMY R W  V DFY + VNGR +L  LFG E + +D +
Sbjct: 42   YVHYNHSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTLFGTETSIHDDS 101

Query: 303  EIIDDSDKPESECVPAKG-RTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESAL 479
            E ++ SD+        KG R+GRWERVTFKI+ISYNG +FDGWQKQP LNTVQ +VE +L
Sbjct: 102  ETVEVSDE--------KGERSGRWERVTFKIIISYNGGAFDGWQKQPGLNTVQEIVERSL 153

Query: 480  GKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKA 659
            G+FVDEKKAQ+LKEK  PLEGCA+VAGRTDKGV+A+ QVC+FYTWRKDVK  DIEDA+ +
Sbjct: 154  GRFVDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVKPWDIEDAINS 213

Query: 660  AAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDD 839
             APGK+RV SVS+VSR FHPNFSAKWRHY YIFP +  N++ E   C+     +    D 
Sbjct: 214  VAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLS--NQEIEKQSCENKKEVENFISDG 271

Query: 840  QYGERLG---EQTCKDEDDDYVQTQQSG----TKPFTFEVSRVNHLLHQLEGKLLSFRMF 998
             Y E+     E    +  ++ + +   G     KP  F V RVN LL QLE KLLS++MF
Sbjct: 272  NYNEQRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMF 331

Query: 999  ARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLV 1172
            ARDTKASRNIGPPTECF++HARAAEA +PC   G G +VMCVELVANRFLRKMVRVLV
Sbjct: 332  ARDTKASRNIGPPTECFMYHARAAEARIPCSDHGEGREVMCVELVANRFLRKMVRVLV 389


>ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
            gi|508784931|gb|EOY32187.1| Pseudouridine synthase
            isoform 2 [Theobroma cacao]
          Length = 446

 Score =  422 bits (1085), Expect = e-115
 Identities = 219/360 (60%), Positives = 261/360 (72%), Gaps = 10/360 (2%)
 Frame = +3

Query: 123  YVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNTNDGA 302
            YV Y H+D+CS  RWTARESY FMY R W  V DFY + VNGR +L  LFG E + +D +
Sbjct: 42   YVHYNHSDSCSSARWTARESYRFMYDRAWQDVIDFYSNVVNGRLTLSTLFGTETSIHDDS 101

Query: 303  EIIDDSDKPESECVPAKG-RTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESAL 479
            E ++ SD+        KG R+GRWERVTFKI+ISYNG +FDGWQKQP LNTVQ +VE +L
Sbjct: 102  ETVEVSDE--------KGERSGRWERVTFKIIISYNGGAFDGWQKQPGLNTVQEIVERSL 153

Query: 480  GKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKA 659
            G+FVDEKKAQ+LKEK  PLEGCA+VAGRTDKGV+A+ QVC+FYTWRKDVK  DIEDA+ +
Sbjct: 154  GRFVDEKKAQLLKEKSKPLEGCAVVAGRTDKGVSAIRQVCSFYTWRKDVKPWDIEDAINS 213

Query: 660  AAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDD 839
             APGK+RV SVS+VSR FHPNFSAKWRHY YIFP +  N++ E   C+     +    D 
Sbjct: 214  VAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLS--NQEIEKQSCENKKEVENFISDG 271

Query: 840  QYGERLG---EQTCKDEDDDYVQTQQSG----TKPFTFEVSRVNHLLHQLEGKLLSFRMF 998
             Y E+     E    +  ++ + +   G     KP  F V RVN LL QLE KLLS++MF
Sbjct: 272  NYNEQRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQLLQQLERKLLSYKMF 331

Query: 999  ARDTKASRNIGPPTECFVHHARAAEAYLPCPKG--GVGSKVMCVELVANRFLRKMVRVLV 1172
            ARDTKASRNIGPPTECF++HARAAEA +PC     G G +VMCVELVANRFLRKMVRVLV
Sbjct: 332  ARDTKASRNIGPPTECFMYHARAAEARIPCSVNDHGEGREVMCVELVANRFLRKMVRVLV 391


>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  419 bits (1078), Expect = e-115
 Identities = 217/364 (59%), Positives = 257/364 (70%)
 Frame = +3

Query: 81   RNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSL 260
            R+LME+      + YV Y HT      RWTARES++FMY RPW +V DFY + V GR SL
Sbjct: 11   RDLMENEKEN--KVYVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSL 68

Query: 261  PQLFGKEVNTNDGAEIIDDSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQP 440
              L G E +     EI++ SDK E   V  K R GRW R+TFKI++SY+G SFDGWQKQP
Sbjct: 69   LGLLGIETHPIHDGEIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQP 128

Query: 441  SLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRK 620
             LNTVQGLVE++LG+FVDE+KAQ LKEK LP+EG   VAGRTDKGVTAL QVC+FYTW+K
Sbjct: 129  GLNTVQGLVEASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKK 188

Query: 621  DVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSEC 800
            DVK  DIEDA+  AAPGK+RV SVS+VSR FHPNFSAKWRHYFYIFP ND ++ +++SE 
Sbjct: 189  DVKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISE- 247

Query: 801  KKHNLDKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNHLLHQLEGKL 980
                                     + D   +   ++  KP TF +SRV+ LL QLEGKL
Sbjct: 248  ------------------------NEMDIQKISFNENRKKPSTFSISRVDQLLRQLEGKL 283

Query: 981  LSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMV 1160
            LS+++FARDTKASRNIGPPTECFV HARA EA L     G G+KVMC+ELVANRFLRKMV
Sbjct: 284  LSYKIFARDTKASRNIGPPTECFVFHARATEARLQFSDDGEGTKVMCIELVANRFLRKMV 343

Query: 1161 RVLV 1172
            RVLV
Sbjct: 344  RVLV 347


>ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622951 [Citrus sinensis]
          Length = 454

 Score =  416 bits (1069), Expect = e-113
 Identities = 221/374 (59%), Positives = 264/374 (70%), Gaps = 13/374 (3%)
 Frame = +3

Query: 90   MESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQL 269
            MES +    + YV Y HTD+C   RWTA+ESYEFM ARPW  V DFY D V+GR +L  L
Sbjct: 34   MESQSRAEKKVYVHYNHTDSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSGRLTLSDL 93

Query: 270  FGKEVNTNDGAEIIDDSDKPE----SECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQ 437
            FG E  T   +   D+++ PE    S+    +  +GRW R  FKI++SY+G SFDGWQKQ
Sbjct: 94   FGTE-RTRTSSIHNDENEIPEVEAGSDANEDRAGSGRWARANFKIVVSYHGPSFDGWQKQ 152

Query: 438  PSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWR 617
            P LNTVQGLVE  LG FVDEK+A++LKEK  PLEGCALVAGRTDKGVTAL QVC+FYTWR
Sbjct: 153  PDLNTVQGLVEKCLGSFVDEKRAKLLKEKCKPLEGCALVAGRTDKGVTALQQVCSFYTWR 212

Query: 618  KDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSE 797
            KDVK  +IEDA+ +AAPGKIRV SVSQVSR FHPNFSAKWR Y YIFP ND        E
Sbjct: 213  KDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLND-------GE 265

Query: 798  CKKHNLDKTI-CHDDQYGERLGEQT--CKDEDDDYVQTQQSG----TKPFTFEVSRVNHL 956
             ++ ++D  +   +      +G+Q+  C +  ++ +   + G     KP  F + RVN L
Sbjct: 266  KREQSIDSEVEVENFHTSNNVGKQSNGCYENIENLLINDEGGFGSHEKPRNFTICRVNLL 325

Query: 957  LHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKG--GVGSKVMCVEL 1130
            L +LEGKLLS++ FARDTKASRNIGPPTECF++HARA EA LPCP    G G KVMCVEL
Sbjct: 326  LQRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPCPVNDHGEGRKVMCVEL 385

Query: 1131 VANRFLRKMVRVLV 1172
            VANRFLRKMVRVLV
Sbjct: 386  VANRFLRKMVRVLV 399


>ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citrus clementina]
            gi|557556408|gb|ESR66422.1| hypothetical protein
            CICLE_v10008288mg [Citrus clementina]
          Length = 447

 Score =  416 bits (1069), Expect = e-113
 Identities = 221/374 (59%), Positives = 264/374 (70%), Gaps = 13/374 (3%)
 Frame = +3

Query: 90   MESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQL 269
            MES +    + YV Y HTD+C   RWTA+ESYEFM ARPW  V DFY D V+GR +L  L
Sbjct: 27   MESQSRAEKKVYVHYNHTDSCKFARWTAKESYEFMRARPWQDVVDFYSDIVSGRLTLSDL 86

Query: 270  FGKEVNTNDGAEIIDDSDKPE----SECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQ 437
            FG E  T   +   D+++ PE    S+    +  +GRW R  FKI++SY+G SFDGWQKQ
Sbjct: 87   FGTE-RTRTSSIHNDENEIPEVEAGSDANEDRAGSGRWARANFKIVVSYHGPSFDGWQKQ 145

Query: 438  PSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWR 617
            P LNTVQGLVE  LG FVDEK+A++LKEK  PLEGCALVAGRTDKGVTAL QVC+FYTWR
Sbjct: 146  PDLNTVQGLVEKCLGSFVDEKRAKLLKEKCKPLEGCALVAGRTDKGVTALQQVCSFYTWR 205

Query: 618  KDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSE 797
            KDVK  +IEDA+ +AAPGKIRV SVSQVSR FHPNFSAKWR Y YIFP ND        E
Sbjct: 206  KDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLND-------GE 258

Query: 798  CKKHNLDKTI-CHDDQYGERLGEQT--CKDEDDDYVQTQQSG----TKPFTFEVSRVNHL 956
             ++ ++D  +   +      +G+Q+  C +  ++ +   + G     KP  F + RVN L
Sbjct: 259  KREQSIDSEVEVENFHTSNNVGKQSNGCYENIENLLINDEGGFGSHEKPRNFTICRVNLL 318

Query: 957  LHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKG--GVGSKVMCVEL 1130
            L +LEGKLLS++ FARDTKASRNIGPPTECF++HARA EA LPCP    G G KVMCVEL
Sbjct: 319  LQRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPCPVNDHGEGRKVMCVEL 378

Query: 1131 VANRFLRKMVRVLV 1172
            VANRFLRKMVRVLV
Sbjct: 379  VANRFLRKMVRVLV 392


>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
            gi|550318755|gb|ERP50021.1| hypothetical protein
            POPTR_0018s14400g [Populus trichocarpa]
          Length = 448

 Score =  412 bits (1059), Expect = e-112
 Identities = 214/365 (58%), Positives = 257/365 (70%), Gaps = 15/365 (4%)
 Frame = +3

Query: 123  YVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKE---VNTN 293
            YVQY HTD+C   RWTARES++FM+ARPW  V DFY  +VNG+ SL +LFG +   V+ +
Sbjct: 38   YVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLELFGTQAHDVHCD 97

Query: 294  DGAEIIDDSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVES 473
            D  E + + +    E V    ++GRW RVTFKI++SY+G SFDGWQKQP LNTVQGLVE 
Sbjct: 98   DKIEEVSN-ETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEK 156

Query: 474  ALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDAL 653
            +LG+FVDEKKAQ LKE+  PLEGCA VAGRTDKGV+AL QVC+FYTWRKDVK  +IEDA+
Sbjct: 157  SLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVKPHEIEDAI 216

Query: 654  KAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEV------------SE 797
               APGK+RV S+S+VSR FHPNFSAKWR Y YIFP ND    +E+              
Sbjct: 217  NDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIEGEGGIENFSSHEN 276

Query: 798  CKKHNLDKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNHLLHQLEGK 977
            C+K    +  C +    E +      DED+      Q   KP +F V RVN LL QLEGK
Sbjct: 277  CEK---QRNECGELASEENVENSIISDEDE-----LQGAKKPRSFSVCRVNQLLQQLEGK 328

Query: 978  LLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKM 1157
            LLS++MFARDTKASRN+GPPTECF++HARA E  LP P    G +VMCVEL+ANRFLRKM
Sbjct: 329  LLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELIANRFLRKM 388

Query: 1158 VRVLV 1172
            VRVLV
Sbjct: 389  VRVLV 393


>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
            gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
            family protein [Populus trichocarpa]
          Length = 457

 Score =  410 bits (1053), Expect = e-112
 Identities = 216/373 (57%), Positives = 255/373 (68%), Gaps = 23/373 (6%)
 Frame = +3

Query: 123  YVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKEVNTN--- 293
            YVQY HTD+C   RWTARES++FM+ARPW  V DFY  +VNG+ SL +LFG +V      
Sbjct: 38   YVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLELFGTQVFFTMEL 97

Query: 294  DGAEIIDDSDKPES--------ECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLN 449
              A  +   DK E         E V    ++GRW RVTFKI++SY+G SFDGWQKQP LN
Sbjct: 98   KKAHDVHCDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLN 157

Query: 450  TVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVK 629
            TVQGLVE +LG+FVDEKKAQ LKE+  PLEGCA VAGRTDKGV+AL QVC+FYTWRKDVK
Sbjct: 158  TVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVK 217

Query: 630  ALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEV------ 791
              +IEDA+   APGK+RV S+S+VSR FHPNFSAKWR Y YIFP ND    +E+      
Sbjct: 218  PHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIEGEGGI 277

Query: 792  ------SECKKHNLDKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNH 953
                    C+K    +  C +    E +      DED+      Q   KP +F V RVN 
Sbjct: 278  ENFSSHENCEK---QRNECGELASEENVENSIISDEDE-----LQGAKKPRSFSVCRVNQ 329

Query: 954  LLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELV 1133
            LL QLEGKLLS++MFARDTKASRN+GPPTECF++HARA E  LP P    G +VMCVEL+
Sbjct: 330  LLQQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSPDHEKGIRVMCVELI 389

Query: 1134 ANRFLRKMVRVLV 1172
            ANRFLRKMVRVLV
Sbjct: 390  ANRFLRKMVRVLV 402


>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
          Length = 446

 Score =  408 bits (1048), Expect = e-111
 Identities = 218/373 (58%), Positives = 263/373 (70%), Gaps = 5/373 (1%)
 Frame = +3

Query: 69   VLRLRNLMESPAPPPPRDYVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAVNG 248
            + R+  ++E       +DYV Y H+D C   RWTARESY+FMY RPW +V DFY + VNG
Sbjct: 20   IRRVGVVVEMETHSTNKDYVHYNHSDPCRFSRWTARESYQFMYGRPWQQVLDFYSNLVNG 79

Query: 249  RRSLPQLFG--KEVNTNDG---AEIIDDSDKPESECVPAKGRTGRWERVTFKILISYNGN 413
              S   LF   K+   +D    AEI + SD  + +   ++ R+GRW R TFK+++ Y+G 
Sbjct: 80   TTSFSSLFPLHKKYQVDDDDYDAEIPEISDD-KVKLKKSEERSGRWARATFKVVLGYHGA 138

Query: 414  SFDGWQKQPSLNTVQGLVESALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQ 593
            SFDGWQKQP LNTVQGLVE +LG+FVDEKKAQ+LK+K LPLE C +VAGRTDKGVTAL Q
Sbjct: 139  SFDGWQKQPGLNTVQGLVERSLGRFVDEKKAQLLKDKCLPLEACTVVAGRTDKGVTALQQ 198

Query: 594  VCAFYTWRKDVKALDIEDALKAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDE 773
            VC+FYTWRKD+   DIE+A+  AA GK++  SVS+VSR FHPNFSAKWR Y YIFPFNDE
Sbjct: 199  VCSFYTWRKDITCQDIEEAINNAALGKLKAKSVSEVSRVFHPNFSAKWRRYLYIFPFNDE 258

Query: 774  NEDDEVSECKKHNLDKTICHDDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNH 953
             ED+E S     NL+     +   GE   E       DD  +  +SG KP +F VSRV+ 
Sbjct: 259  -EDEEQSNKNGENLETYEKIESGCGEWNDESFGNLIIDD-SEELESGKKPSSFSVSRVDQ 316

Query: 954  LLHQLEGKLLSFRMFARDTKASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELV 1133
            LL  LEGKLLS++MFARDTKASRN GPPTECF++HARAAEA LP      G K+MCVELV
Sbjct: 317  LLRLLEGKLLSYKMFARDTKASRNEGPPTECFIYHARAAEARLPTSDCTEGRKIMCVELV 376

Query: 1134 ANRFLRKMVRVLV 1172
            ANRFLRKMVRVLV
Sbjct: 377  ANRFLRKMVRVLV 389


>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 444

 Score =  407 bits (1045), Expect = e-111
 Identities = 212/353 (60%), Positives = 249/353 (70%), Gaps = 3/353 (0%)
 Frame = +3

Query: 123  YVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKE---VNTN 293
            +V Y HT      RWTARES+EFMYARPW RVNDFYL+ V    SLP LFG +   V+ N
Sbjct: 50   HVHYNHTHPSKYARWTARESFEFMYARPWQRVNDFYLNIVRANLSLPLLFGAQTLVVDHN 109

Query: 294  DGAEIIDDSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVES 473
            D   I   S   E E V ++ R+GRW R TFKI++SY+G SFDGWQKQP LNTVQ +VE 
Sbjct: 110  DTG-IAALSGSSELESVASEDRSGRWARTTFKIILSYHGGSFDGWQKQPGLNTVQSIVEG 168

Query: 474  ALGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDAL 653
            +LGKFVDEKK Q+LK+K LP+EGCA+VAGRTDKGVT L QVC+FYTW+KDVK  DIEDA+
Sbjct: 169  SLGKFVDEKKTQLLKDKGLPIEGCAIVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAI 228

Query: 654  KAAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICH 833
              AAPGK+RV SVS+VSR FHPNFSAKWR Y YIFP  +    D+ S       D    +
Sbjct: 229  NHAAPGKLRVISVSEVSRVFHPNFSAKWRRYLYIFPLTNGGYTDQSS-------DNGEFY 281

Query: 834  DDQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTK 1013
            D      + +   KDE        ++  K + F +S+VN LL +LEGKLLS++MFARDTK
Sbjct: 282  DSFKYNEIHDSASKDE-------LENEKKSYAFSISKVNRLLRKLEGKLLSYKMFARDTK 334

Query: 1014 ASRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLV 1172
            ASRN GPPTECFV+HARA E  LP    G  +KVMCVELVANRFLRKMVRVLV
Sbjct: 335  ASRNDGPPTECFVYHARAMEVKLPATDHGEETKVMCVELVANRFLRKMVRVLV 387


>ref|XP_007160215.1| hypothetical protein PHAVU_002G302500g [Phaseolus vulgaris]
            gi|561033630|gb|ESW32209.1| hypothetical protein
            PHAVU_002G302500g [Phaseolus vulgaris]
          Length = 440

 Score =  406 bits (1043), Expect = e-110
 Identities = 211/351 (60%), Positives = 255/351 (72%), Gaps = 1/351 (0%)
 Frame = +3

Query: 123  YVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKE-VNTNDG 299
            +V Y HTD     RWTARES++FMYARPW RVNDFY + V    SL  LFG + +  ++ 
Sbjct: 48   HVHYNHTDPSEYARWTARESFQFMYARPWQRVNDFYFNVVRANLSLSLLFGPQTILDHND 107

Query: 300  AEIIDDSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESAL 479
              I   SD+ E E V ++ R+GRW R TFKI++SY+G SFDGWQKQP LNTVQG+VE++L
Sbjct: 108  TGIAALSDQSELESVASEDRSGRWARRTFKIILSYHGGSFDGWQKQPGLNTVQGIVEASL 167

Query: 480  GKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALKA 659
            GKFVDEKK Q+LK+K LP+EGCA+VAGRTDKGVT L QVC+FYTW+KDVK  DIEDA+  
Sbjct: 168  GKFVDEKKTQLLKDKGLPIEGCAVVAGRTDKGVTGLQQVCSFYTWKKDVKPRDIEDAINQ 227

Query: 660  AAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHDD 839
            AA GK+RV SVS+VSR FHPNFSAKWRHY YIFP  +   D       + N +   C   
Sbjct: 228  AALGKLRVISVSEVSRVFHPNFSAKWRHYLYIFPLTNGYRD-------QSNSNGESCDIS 280

Query: 840  QYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKAS 1019
            +Y E + + + KD     ++ Q+   K + F VS+VN LL +LEGKLLS++MFARDTKAS
Sbjct: 281  KYNE-MHDSSSKDG----IENQE---KSYLFSVSKVNVLLRKLEGKLLSYKMFARDTKAS 332

Query: 1020 RNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLV 1172
            RN GPPTECFV+HARA E  LP    G  +KVMCVELVANRFLRKMVRVLV
Sbjct: 333  RNDGPPTECFVYHARAMEVKLPTTDCGEETKVMCVELVANRFLRKMVRVLV 383


>ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-like [Cicer arietinum]
          Length = 422

 Score =  405 bits (1040), Expect = e-110
 Identities = 210/352 (59%), Positives = 252/352 (71%), Gaps = 1/352 (0%)
 Frame = +3

Query: 120  DYVQYQHTDACSLHRWTARESYEFMYARPWHRVNDFYLDAVNGRRSLPQLFGKE-VNTND 296
            ++V Y HT      RW ARES+EFMYARPW  VNDFYL+AV G  SLP LFG + V  +D
Sbjct: 29   NHVHYNHTHPSKYTRWNARESFEFMYARPWQLVNDFYLNAVRGNSSLPLLFGVQTVPDHD 88

Query: 297  GAEIIDDSDKPESECVPAKGRTGRWERVTFKILISYNGNSFDGWQKQPSLNTVQGLVESA 476
             + I   SDK E E   +K R GRW R+ FKI++SY+G SFDGWQKQPSLNTVQ +VE++
Sbjct: 89   DSGISVLSDKTELEKGVSKDRGGRWARINFKIVLSYHGESFDGWQKQPSLNTVQSVVEAS 148

Query: 477  LGKFVDEKKAQVLKEKKLPLEGCALVAGRTDKGVTALGQVCAFYTWRKDVKALDIEDALK 656
            LGKFVDE K Q+LKEK LP+EGCA VAGRTDKGVTAL QVC+FYTW+KD+   DIEDA+ 
Sbjct: 149  LGKFVDEMKTQLLKEKGLPIEGCASVAGRTDKGVTALQQVCSFYTWKKDINPRDIEDAIN 208

Query: 657  AAAPGKIRVTSVSQVSRDFHPNFSAKWRHYFYIFPFNDENEDDEVSECKKHNLDKTICHD 836
              APGK+RV SV +VSR FHPNFSAKWR Y YIFP  DE + D+ S   + + D+ I + 
Sbjct: 209  DGAPGKLRVISVHEVSRAFHPNFSAKWRRYLYIFPLTDEGDKDQ-SGSNEESCDRFIYN- 266

Query: 837  DQYGERLGEQTCKDEDDDYVQTQQSGTKPFTFEVSRVNHLLHQLEGKLLSFRMFARDTKA 1016
                     + C     D ++ +    K + F V +VN LL +LEGKLLS++MFARDTKA
Sbjct: 267  ---------EVCDSVSKDELENEM---KSYVFSVRKVNRLLQKLEGKLLSYKMFARDTKA 314

Query: 1017 SRNIGPPTECFVHHARAAEAYLPCPKGGVGSKVMCVELVANRFLRKMVRVLV 1172
            SRN GPPTECFV+HARA EA LP    G  ++VMC+ELVANRFLRKMVRVLV
Sbjct: 315  SRNDGPPTECFVYHARAMEARLPTTDNG-EARVMCIELVANRFLRKMVRVLV 365