BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00017044
         (729 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFV61856.1| Ycf2 (chloroplast) [Origanum vulgare subsp. vulga...    41   2e-06
ref|YP_007507155.1| hypothetical chloroplast RF2 (chloroplast) [...    40   4e-06

>gb|AFV61856.1| Ycf2 (chloroplast) [Origanum vulgare subsp. vulgare]
            gi|410176216|gb|AFV61875.1| Ycf2 (chloroplast) [Origanum
            vulgare subsp. vulgare]
          Length = 2261

 Score = 40.8 bits (94), Expect(2) = 2e-06
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -3

Query: 220  LHCQISSKCFHNLLLFEEMIHRH 152
            L  +ISSKCFHNLLL EEMIHR+
Sbjct: 1283 LRSEISSKCFHNLLLSEEMIHRN 1305



 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 19/25 (76%), Positives = 20/25 (80%), Gaps = 3/25 (12%)
 Frame = -2

Query: 173  RRNDS---STHPRLPNVREFLYSIL 108
            R N+S   STHPR PNVREFLYSIL
Sbjct: 1304 RNNESPLISTHPRSPNVREFLYSIL 1328


>ref|YP_007507155.1| hypothetical chloroplast RF2 (chloroplast) [Salvia miltiorrhiza]
            gi|459014556|ref|YP_007507174.1| hypothetical chloroplast
            RF2 (chloroplast) [Salvia miltiorrhiza]
            gi|401879785|gb|AFQ30972.1| hypothetical chloroplast RF2
            (chloroplast) [Salvia miltiorrhiza]
            gi|401879806|gb|AFQ30993.1| hypothetical chloroplast RF2
            (chloroplast) [Salvia miltiorrhiza]
            gi|573461995|emb|CCQ71664.1| Ycf2 (chloroplast) [Salvia
            miltiorrhiza] gi|573462016|emb|CCQ71685.1| Ycf2
            (chloroplast) [Salvia miltiorrhiza]
          Length = 2283

 Score = 39.7 bits (91), Expect(2) = 4e-06
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = -3

Query: 211  QISSKCFHNLLLFEEMIHRH 152
            +ISSKCFHNLLL EEMIHR+
Sbjct: 1292 EISSKCFHNLLLSEEMIHRN 1311



 Score = 37.7 bits (86), Expect(2) = 4e-06
 Identities = 19/25 (76%), Positives = 20/25 (80%), Gaps = 3/25 (12%)
 Frame = -2

Query: 173  RRNDS---STHPRLPNVREFLYSIL 108
            R N+S   STHPR PNVREFLYSIL
Sbjct: 1310 RNNESPLISTHPRSPNVREFLYSIL 1334