BLASTX nr result

ID: Mentha22_contig00014357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00014357
         (488 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39873.1| hypothetical protein MIMGU_mgv1a011311mg [Mimulus...    61   1e-07
ref|XP_004142412.1| PREDICTED: uncharacterized protein LOC101202...    60   3e-07
emb|CBI31404.3| unnamed protein product [Vitis vinifera]               59   7e-07
ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleop...    59   7e-07
emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]    59   7e-07
ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [...    55   8e-06

>gb|EYU39873.1| hypothetical protein MIMGU_mgv1a011311mg [Mimulus guttatus]
          Length = 286

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/81 (46%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
 Frame = +3

Query: 3   RYAGGRESRDRFLNDRYPPPGDRFAAERYVAXXXXXXXXXXXNGYGIDRAYDRDV--XXX 176
           RYA    SRDRF NDRY P GDRF  +RY             NGYG DR Y+RDV     
Sbjct: 196 RYA----SRDRFANDRYVPAGDRFPIDRY-----GGSERFPQNGYGKDRGYERDVGPRGG 246

Query: 177 XXXXXXXXXXTRYDGRSYRER 239
                      RY+GRSYRER
Sbjct: 247 GDRYGGGGGPARYEGRSYRER 267


>ref|XP_004142412.1| PREDICTED: uncharacterized protein LOC101202917 [Cucumis sativus]
           gi|449487254|ref|XP_004157539.1| PREDICTED:
           uncharacterized protein LOC101231083 [Cucumis sativus]
          Length = 286

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/74 (43%), Positives = 38/74 (51%)
 Frame = +3

Query: 24  SRDRFLNDRYPPPGDRFAAERYVAXXXXXXXXXXXNGYGIDRAYDRDVXXXXXXXXXXXX 203
           SRDR+++DRYPP GDRF + RY             NGYG DR Y RD             
Sbjct: 200 SRDRYVSDRYPPGGDRFGSSRYT----NDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGG 255

Query: 204 XTRYDGRSYRERPS 245
             R +GRSYR RP+
Sbjct: 256 PARDEGRSYRNRPA 269


>emb|CBI31404.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +3

Query: 24  SRDRFLNDRYPPPGDRFAAERYVAXXXXXXXXXXXNGYGIDRAYDRDVXXXXXXXXXXXX 203
           +RDR++NDRY P GDRF+ +RY             NGYG DR YDRD             
Sbjct: 208 TRDRYVNDRYAPSGDRFSGDRY-----GGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGG 262

Query: 204 XT-RYDGRSYRERP 242
            + R +GRSYR RP
Sbjct: 263 GSARNEGRSYRNRP 276


>ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis
           vinifera]
          Length = 278

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +3

Query: 24  SRDRFLNDRYPPPGDRFAAERYVAXXXXXXXXXXXNGYGIDRAYDRDVXXXXXXXXXXXX 203
           +RDR++NDRY P GDRF+ +RY             NGYG DR YDRD             
Sbjct: 192 TRDRYVNDRYAPSGDRFSGDRY-----GGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGG 246

Query: 204 XT-RYDGRSYRERP 242
            + R +GRSYR RP
Sbjct: 247 GSARNEGRSYRNRP 260


>emb|CAN66927.1| hypothetical protein VITISV_011831 [Vitis vinifera]
          Length = 240

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +3

Query: 24  SRDRFLNDRYPPPGDRFAAERYVAXXXXXXXXXXXNGYGIDRAYDRDVXXXXXXXXXXXX 203
           +RDR++NDRY P GDRF+ +RY             NGYG DR YDRD             
Sbjct: 154 TRDRYVNDRYAPSGDRFSGDRY-----GGSDRYPQNGYGKDRGYDRDAAPRGGGDRYAGG 208

Query: 204 XT-RYDGRSYRERP 242
            + R +GRSYR RP
Sbjct: 209 GSARNEGRSYRNRP 222


>ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223526781|gb|EEF29005.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 276

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 36/92 (39%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
 Frame = +3

Query: 3   RYAGGR------------ESRDRFLNDRYPPPGDRFAAERYVAXXXXXXXXXXXNGYGID 146
           RY GGR             SRDR+ ++RYPP GDRFA++RY             N YG D
Sbjct: 173 RYDGGRFGDRDRFDSRDKYSRDRYASERYPPSGDRFASDRY-----GGSDRYAHNSYGKD 227

Query: 147 RAYDRDVXXXXXXXXXXXXXTRYDGRSYRERP 242
           R Y+RD               R D RSYR RP
Sbjct: 228 RGYERDAVTRGGSDRYGNGGPRGD-RSYRSRP 258


Top