BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00010588
         (808 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42502.1| hypothetical protein MIMGU_mgv1a001452mg [Mimulus...   496   e-138
emb|CBI15105.3| unnamed protein product [Vitis vinifera]              450   e-124
ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi...   450   e-124
ref|XP_006344988.1| PREDICTED: pentatricopeptide repeat-containi...   444   e-122
ref|XP_004236160.1| PREDICTED: pentatricopeptide repeat-containi...   443   e-122
ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1...   438   e-120
ref|XP_006439718.1| hypothetical protein CICLE_v10018817mg [Citr...   437   e-120
ref|XP_006476695.1| PREDICTED: pentatricopeptide repeat-containi...   436   e-120
ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3...   430   e-118
ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2...   430   e-118
ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Popu...   424   e-116
ref|XP_007210369.1| hypothetical protein PRUPE_ppa001337mg [Prun...   420   e-115
ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containi...   417   e-114
ref|XP_002511477.1| pentatricopeptide repeat-containing protein,...   415   e-114
ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containi...   411   e-112
ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containi...   411   e-112
ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containi...   408   e-111
ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arab...   406   e-111
ref|XP_006579551.1| PREDICTED: pentatricopeptide repeat-containi...   403   e-110
ref|XP_006300609.1| hypothetical protein CARUB_v10019779mg [Caps...   403   e-110

>gb|EYU42502.1| hypothetical protein MIMGU_mgv1a001452mg [Mimulus guttatus]
          Length = 816

 Score =  496 bits (1277), Expect = e-138
 Identities = 238/268 (88%), Positives = 252/268 (94%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            TIETYN+LIHSFAKGGLYKE+EAILSRM ELGV RNRDSLNGVIEAYRQGGQFE+AIKAY
Sbjct: 450  TIETYNSLIHSFAKGGLYKESEAILSRMSELGVPRNRDSLNGVIEAYRQGGQFEEAIKAY 509

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEKVRCDPDEYTLEAVLSVYCF GLVDESEEQF+QIKELGIQPSVMCYCMMLAVYAK 
Sbjct: 510  VNMEKVRCDPDEYTLEAVLSVYCFVGLVDESEEQFRQIKELGIQPSVMCYCMMLAVYAKA 569

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
            +RWD A+ELLNEM+TNR SNIHQVIGQMIKGDFDD  NWQMVEY FDKLNSEGCG GIRF
Sbjct: 570  DRWDMANELLNEMHTNRTSNIHQVIGQMIKGDFDDAGNWQMVEYVFDKLNSEGCGLGIRF 629

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +NTILEALWCLGQK+RAA+VL EATKRG+YPELYRKNKLIWSVDVHRMWPGGACTA SVW
Sbjct: 630  YNTILEALWCLGQKKRAAKVLSEATKRGLYPELYRKNKLIWSVDVHRMWPGGACTATSVW 689

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            LN+MQEL+ NG ELPQLAT VVVRG ME
Sbjct: 690  LNDMQELLINGGELPQLATAVVVRGQME 717



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 38/131 (29%), Positives = 66/131 (50%)
 Frame = +3

Query: 9   ETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVD 188
           +TYN LI  F +GG +KE   +   M E  V+ N ++  G+I +  +GG  EDA +  + 
Sbjct: 347 DTYNILIEVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIYSCGKGGLHEDAKRILLH 406

Query: 189 MEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTER 368
           M +    P       V+  Y  A L +E+   F  + E+G  P++  Y  ++  +AK   
Sbjct: 407 MSEKGLVPSCKAYTGVIESYGQAALYEEALVAFNTMNEVGSMPTIETYNSLIHSFAKGGL 466

Query: 369 WDEADELLNEM 401
           + E++ +L+ M
Sbjct: 467 YKESEAILSRM 477



 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 39/129 (30%), Positives = 62/129 (48%)
 Frame = +3

Query: 15  YNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDME 194
           Y+ +I    + GL  ++  I   M    V R   S   +I AY + GQ+E A++    M+
Sbjct: 144 YSLIIGILGREGLLDKSAEIFDEMAAHSVARTVLSYTAIINAYGRNGQYEVAMELLERMK 203

Query: 195 KVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWD 374
                PD  T   +LS     GL DE+E  F+ + E G+ P +  Y  ++  + K E+ +
Sbjct: 204 -----PDLVTYNTLLSACSNRGLGDEAEMVFRTMNESGVLPDITTYSYLVDTFGKLEKLE 258

Query: 375 EADELLNEM 401
           +  ELL EM
Sbjct: 259 KVSELLGEM 267



 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 47/208 (22%), Positives = 94/208 (45%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TYN L+ + +  GL  E E +   M E GV  +  + + +++ + +  + E   +   +M
Sbjct: 208 TYNTLLSACSNRGLGDEAEMVFRTMNESGVLPDITTYSYLVDTFGKLEKLEKVSELLGEM 267

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
           E     P+  +   +L  Y  +G + ES   F+Q++  G  P+   Y ++L+++ K  R+
Sbjct: 268 EAEGNLPEIMSYNVLLDAYAHSGKIKESMVVFRQMQGAGCIPNAGTYSILLSLFGKNGRY 327

Query: 372 DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
           DE  EL  EM  +           +I+  F +   ++ V   F  +  E     +  +  
Sbjct: 328 DEVRELFLEMKVSNTEPDADTYNILIE-VFGEGGYFKEVVTLFHDMVEENVEPNMETYEG 386

Query: 552 ILEALWCLGQKERAARVLDEATKRGMYP 635
           ++ +    G  E A R+L   +++G+ P
Sbjct: 387 LIYSCGKGGLHEDAKRILLHMSEKGLVP 414


>emb|CBI15105.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  450 bits (1158), Expect = e-124
 Identities = 210/268 (78%), Positives = 242/268 (90%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            T+ETYN+LI  FAKGGLYKE+EAIL +MG+ GV RNRD+ NGVIEA+RQGGQFE+AIKAY
Sbjct: 254  TVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAY 313

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEK RCDPDE TLEAVLSVYCFAGLV+ESEEQF +IK LGI PSVMCYCMMLAVYAK 
Sbjct: 314  VEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKA 373

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
            +RWD+A +LL+EM+TNRVSNIHQVIGQMI+GD+DD SNWQMVEY F+KL SEGC  G+RF
Sbjct: 374  DRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRF 433

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +NT+LEALW LGQKERA RVL+EATKRG++PEL+RKNKL+WSVDVHRMW G ACTAISVW
Sbjct: 434  YNTLLEALWWLGQKERATRVLNEATKRGLFPELFRKNKLVWSVDVHRMWEGAACTAISVW 493

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            LNNM E+  +G++LPQLA+ VVVRGHME
Sbjct: 494  LNNMHEMFISGDDLPQLASAVVVRGHME 521



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 52/210 (24%), Positives = 93/210 (44%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TYN LI+ F +GG +KE   +   M E  V+ N ++  G+I A  +GG  EDA K  + M
Sbjct: 152 TYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHM 211

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
            +    P       V+  Y  A L +E+   F  + E+G +P+V  Y  ++ ++AK   +
Sbjct: 212 NEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLY 271

Query: 372 DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
            E++ +L +M  + V+        +I+  F     ++    A+ ++    C    +    
Sbjct: 272 KESEAILLKMGQSGVARNRDTFNGVIEA-FRQGGQFEEAIKAYVEMEKARCDPDEQTLEA 330

Query: 552 ILEALWCLGQKERAARVLDEATKRGMYPEL 641
           +L      G  E +     E    G+ P +
Sbjct: 331 VLSVYCFAGLVEESEEQFGEIKALGILPSV 360



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I TYN L+ + A+ GL  E E +   M E G+  +  + + ++E + +  + E   +   
Sbjct: 10  IVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLK 69

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +ME     PD  +   +L  +  +G + E+   F+Q++  G  P+   Y ++L +Y +  
Sbjct: 70  EMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHG 129

Query: 366 RWDEADELLNEMYTNRVSNI--HQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIR 539
           R+D+  +L  EM   +VSN   +     ++   F +   ++ V   F  +  E     + 
Sbjct: 130 RYDDVRDLFLEM---KVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNME 186

Query: 540 FFNTILEALWCLGQKERAARVLDEATKRGMYP 635
            +  ++ A    G  E A ++L    ++G+ P
Sbjct: 187 TYEGLIFACGKGGLHEDAKKILLHMNEKGVVP 218


>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic [Vitis vinifera]
          Length = 869

 Score =  450 bits (1158), Expect = e-124
 Identities = 210/268 (78%), Positives = 242/268 (90%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            T+ETYN+LI  FAKGGLYKE+EAIL +MG+ GV RNRD+ NGVIEA+RQGGQFE+AIKAY
Sbjct: 496  TVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAY 555

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEK RCDPDE TLEAVLSVYCFAGLV+ESEEQF +IK LGI PSVMCYCMMLAVYAK 
Sbjct: 556  VEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKA 615

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
            +RWD+A +LL+EM+TNRVSNIHQVIGQMI+GD+DD SNWQMVEY F+KL SEGC  G+RF
Sbjct: 616  DRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRF 675

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +NT+LEALW LGQKERA RVL+EATKRG++PEL+RKNKL+WSVDVHRMW G ACTAISVW
Sbjct: 676  YNTLLEALWWLGQKERATRVLNEATKRGLFPELFRKNKLVWSVDVHRMWEGAACTAISVW 735

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            LNNM E+  +G++LPQLA+ VVVRGHME
Sbjct: 736  LNNMHEMFISGDDLPQLASAVVVRGHME 763



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 52/210 (24%), Positives = 93/210 (44%)
 Frame = +3

Query: 12   TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
            TYN LI+ F +GG +KE   +   M E  V+ N ++  G+I A  +GG  EDA K  + M
Sbjct: 394  TYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHM 453

Query: 192  EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
             +    P       V+  Y  A L +E+   F  + E+G +P+V  Y  ++ ++AK   +
Sbjct: 454  NEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLY 513

Query: 372  DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
             E++ +L +M  + V+        +I+  F     ++    A+ ++    C    +    
Sbjct: 514  KESEAILLKMGQSGVARNRDTFNGVIEA-FRQGGQFEEAIKAYVEMEKARCDPDEQTLEA 572

Query: 552  ILEALWCLGQKERAARVLDEATKRGMYPEL 641
            +L      G  E +     E    G+ P +
Sbjct: 573  VLSVYCFAGLVEESEEQFGEIKALGILPSV 602



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 49/198 (24%), Positives = 96/198 (48%), Gaps = 8/198 (4%)
 Frame = +3

Query: 93  LGVQRNRDSLNG---VIEAYRQGGQFEDAIKAYVDMEK-VRCDPDEYTLEAVLSVYCFAG 260
           L V +N+ SLN    V + + Q G ++ +++ +  M++ + C P+E+    ++ V    G
Sbjct: 101 LDVFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREG 160

Query: 261 LVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWDEADELLNEMYTNRVS----NIH 428
           L+++ +E F ++   G+ PSV  +  ++  Y +  ++  + ELL+ M   RVS      +
Sbjct: 161 LLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYN 220

Query: 429 QVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNTILEALWCLGQKERAARVLD 608
            VI    +G  D    W+ +   F ++  EG    I  +NT+L A    G  + A  V  
Sbjct: 221 TVINSCARGGLD----WEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFR 276

Query: 609 EATKRGMYPELYRKNKLI 662
              + G+ P++   + L+
Sbjct: 277 TMNEGGILPDITTYSYLV 294



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           ++ ++ ALI+++ + G YK +  +L RM +  V  +  + N VI +  +GG  +E+ +  
Sbjct: 180 SVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGL 239

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           +  M       D  T   +LS     GL DE+E  F+ + E GI P +  Y  ++  + K
Sbjct: 240 FAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGK 299

Query: 360 TERWDEADELLNEM 401
             R ++  ELL EM
Sbjct: 300 LNRLEKVSELLKEM 313



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I TYN L+ + A+ GL  E E +   M E G+  +  + + ++E + +  + E   +   
Sbjct: 252 IVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLK 311

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +ME     PD  +   +L  +  +G + E+   F+Q++  G  P+   Y ++L +Y +  
Sbjct: 312 EMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHG 371

Query: 366 RWDEADELLNEMYTNRVSNI--HQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIR 539
           R+D+  +L  EM   +VSN   +     ++   F +   ++ V   F  +  E     + 
Sbjct: 372 RYDDVRDLFLEM---KVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNME 428

Query: 540 FFNTILEALWCLGQKERAARVLDEATKRGMYP 635
            +  ++ A    G  E A ++L    ++G+ P
Sbjct: 429 TYEGLIFACGKGGLHEDAKKILLHMNEKGVVP 460


>ref|XP_006344988.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like [Solanum tuberosum]
          Length = 860

 Score =  444 bits (1141), Expect = e-122
 Identities = 206/267 (77%), Positives = 241/267 (90%)
 Frame = +3

Query: 6    IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
            +ET+N+LIH+FAKGGLYKE+EAI  RMGE+GV RNRDS NG+IE YRQGGQFE+AIKAYV
Sbjct: 487  VETFNSLIHTFAKGGLYKESEAIWFRMGEVGVPRNRDSFNGLIEGYRQGGQFEEAIKAYV 546

Query: 186  DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            +MEK RCDPDE TLEAVLSVYCFAGLVDESEEQFQ+IK LGIQPS++C CMMLA+YAK+E
Sbjct: 547  EMEKARCDPDERTLEAVLSVYCFAGLVDESEEQFQEIKSLGIQPSIICCCMMLAIYAKSE 606

Query: 366  RWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
            RWD A ELLN++ TN+ S++HQ+IG+MI GDFDD +NWQMVEY FDKL SEGCG  +RF+
Sbjct: 607  RWDMARELLNDVMTNKTSDMHQIIGRMIHGDFDDENNWQMVEYVFDKLKSEGCGLSMRFY 666

Query: 546  NTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVWL 725
            NT++EALW LGQKERAARVL+EATKRG++PEL+R+NKL+WSVDVHRMWPGGACTAISVWL
Sbjct: 667  NTLIEALWWLGQKERAARVLNEATKRGLFPELFRRNKLVWSVDVHRMWPGGACTAISVWL 726

Query: 726  NNMQELVTNGEELPQLATTVVVRGHME 806
            N+M+EL   GEELPQLA+ VVVRG  E
Sbjct: 727  NDMEELFHKGEELPQLASIVVVRGQTE 753



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 50/211 (23%), Positives = 88/211 (41%)
 Frame = +3

Query: 9    ETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVD 188
            +TYN LI  F +GG +KE   +   M E  V+ N ++  G+I A  +GG  EDA +  + 
Sbjct: 383  DTYNILIQVFGEGGYFKEVVTLFHDMVEEKVEPNMETYEGLIYACGKGGLHEDAKRILLH 442

Query: 189  MEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTER 368
            M      P      AV+  Y  A L +E+   F  + E+G +P V  +  ++  +AK   
Sbjct: 443  MNGQGLVPSSKVYTAVIEAYGQAALYEEAVVAFNTMNEVGSRPMVETFNSLIHTFAKGGL 502

Query: 369  WDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFN 548
            + E++ +   M    V         +I+G +     ++    A+ ++    C    R   
Sbjct: 503  YKESEAIWFRMGEVGVPRNRDSFNGLIEG-YRQGGQFEEAIKAYVEMEKARCDPDERTLE 561

Query: 549  TILEALWCLGQKERAARVLDEATKRGMYPEL 641
             +L      G  + +     E    G+ P +
Sbjct: 562  AVLSVYCFAGLVDESEEQFQEIKSLGIQPSI 592



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 48/208 (23%), Positives = 92/208 (44%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TYN L+ + +   L  E E +   M E GV  +  + + ++E + + G+ E   +  ++M
Sbjct: 244 TYNTLLSACSSRELEDEAEMVFRTMNEAGVLPDVTTYSYLVETFGKLGKLEKVSELLMEM 303

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
           E     P+  +   +L  Y   G + E+ + F+Q++  G   +   Y ++L +Y K  R+
Sbjct: 304 EAGGTSPEVTSYNVLLEAYAHLGSMKEAMDVFRQMQAAGCVANAETYSILLNLYGKNGRY 363

Query: 372 DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
           D+  EL  EM T+           +I+  F +   ++ V   F  +  E     +  +  
Sbjct: 364 DQVRELFLEMKTSNTEPDADTYNILIQ-VFGEGGYFKEVVTLFHDMVEEKVEPNMETYEG 422

Query: 552 ILEALWCLGQKERAARVLDEATKRGMYP 635
           ++ A    G  E A R+L     +G+ P
Sbjct: 423 LIYACGKGGLHEDAKRILLHMNGQGLVP 450



 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           T+ +Y A+I+++ + G Y+ +  +L +M +  +  +  + N VI +  +GG ++E  +  
Sbjct: 170 TVFSYTAIINAYGRNGQYETSLQLLEKMKQENIVPSILTYNTVINSCARGGYEWEGLLGL 229

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +LS      L DE+E  F+ + E G+ P V  Y  ++  + K
Sbjct: 230 FAEMRHEGIQPDLVTYNTLLSACSSRELEDEAEMVFRTMNEAGVLPDVTTYSYLVETFGK 289

Query: 360 TERWDEADELLNEM 401
             + ++  ELL EM
Sbjct: 290 LGKLEKVSELLMEM 303



 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 38/132 (28%), Positives = 70/132 (53%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           +ETY  LI++  KGGL+++ + IL  M   G+  +      VIEAY Q   +E+A+ A+ 
Sbjct: 417 METYEGLIYACGKGGLHEDAKRILLHMNGQGLVPSSKVYTAVIEAYGQAALYEEAVVAFN 476

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            M +V   P   T  +++  +   GL  ESE  + ++ E+G+  +   +  ++  Y +  
Sbjct: 477 TMNEVGSRPMVETFNSLIHTFAKGGLYKESEAIWFRMGEVGVPRNRDSFNGLIEGYRQGG 536

Query: 366 RWDEADELLNEM 401
           +++EA +   EM
Sbjct: 537 QFEEAIKAYVEM 548


>ref|XP_004236160.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like [Solanum lycopersicum]
          Length = 860

 Score =  443 bits (1140), Expect = e-122
 Identities = 205/267 (76%), Positives = 241/267 (90%)
 Frame = +3

Query: 6    IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
            +ET+N+LIH+FAKGGLYKE+EAI  RMGE+GV RNRDS NG+IE YRQGGQFE+AIKAYV
Sbjct: 487  VETFNSLIHTFAKGGLYKESEAIWFRMGEVGVPRNRDSFNGMIEGYRQGGQFEEAIKAYV 546

Query: 186  DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            +MEK RCDPDE TLEAVLSVYCFAGLVDESEEQFQ+IK LGIQPS++C CMMLA+YAK+E
Sbjct: 547  EMEKARCDPDERTLEAVLSVYCFAGLVDESEEQFQEIKSLGIQPSIICCCMMLAIYAKSE 606

Query: 366  RWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
            RWD A ELLN++ TN+ S++HQ+IG+MI GDFDD +NWQMVEY FDKL SEGCG  +RF+
Sbjct: 607  RWDMARELLNDVMTNKTSDMHQIIGRMIHGDFDDENNWQMVEYVFDKLKSEGCGLSMRFY 666

Query: 546  NTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVWL 725
            NT++EALW LGQKERAARVL+EATKRG++PEL+R+NKL+WSVDVHRMWPGGACTAIS+WL
Sbjct: 667  NTLIEALWWLGQKERAARVLNEATKRGLFPELFRRNKLVWSVDVHRMWPGGACTAISIWL 726

Query: 726  NNMQELVTNGEELPQLATTVVVRGHME 806
            N+M+EL   GEELPQLA+ VVVRG  E
Sbjct: 727  NDMEELFHKGEELPQLASIVVVRGQTE 753



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 51/211 (24%), Positives = 88/211 (41%)
 Frame = +3

Query: 9    ETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVD 188
            +TYN LI  F +GG +KE   +   M E  V+ N ++  G+I A  +GG  EDA +  + 
Sbjct: 383  DTYNILIQVFGEGGYFKEVVTLFHDMVEEKVEPNMETYEGLIYACGKGGLHEDAKRILLH 442

Query: 189  MEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTER 368
            M      P      AV+  Y  A L +E+   F  + E+G +P V  +  ++  +AK   
Sbjct: 443  MNGQGLVPSSKVYTAVIEAYGQAALYEEAVVAFNTMNEVGSRPVVETFNSLIHTFAKGGL 502

Query: 369  WDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFN 548
            + E++ +   M    V         MI+G +     ++    A+ ++    C    R   
Sbjct: 503  YKESEAIWFRMGEVGVPRNRDSFNGMIEG-YRQGGQFEEAIKAYVEMEKARCDPDERTLE 561

Query: 549  TILEALWCLGQKERAARVLDEATKRGMYPEL 641
             +L      G  + +     E    G+ P +
Sbjct: 562  AVLSVYCFAGLVDESEEQFQEIKSLGIQPSI 592



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 48/208 (23%), Positives = 92/208 (44%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TYN L+ + +   L  E E +   M E GV  +  + + ++E + + G+ E   +  ++M
Sbjct: 244 TYNTLLSACSSRELEDEAEMVFRTMNEAGVLPDVTTYSYLVETFGKLGKLEKVSELLMEM 303

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
           E     P+  +   +L  Y   G + E+ + F+Q++  G   +   Y ++L +Y K  R+
Sbjct: 304 EAGGTSPEVTSYNVLLEAYAHLGSMKEAMDVFRQMQAAGCVANAETYSILLNLYGKNGRY 363

Query: 372 DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
           D+  EL  EM T+           +I+  F +   ++ V   F  +  E     +  +  
Sbjct: 364 DQVRELFLEMKTSNTEPDADTYNILIQ-VFGEGGYFKEVVTLFHDMVEEKVEPNMETYEG 422

Query: 552 ILEALWCLGQKERAARVLDEATKRGMYP 635
           ++ A    G  E A R+L     +G+ P
Sbjct: 423 LIYACGKGGLHEDAKRILLHMNGQGLVP 450



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           T+ +Y A+I+S+ + G Y+ +  +L +M +  +  +  + N VI +  +GG ++E  +  
Sbjct: 170 TVFSYTAIINSYGRNGQYETSLQLLEKMKQENIVPSILTYNTVINSCARGGYEWEGLLGL 229

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +LS      L DE+E  F+ + E G+ P V  Y  ++  + K
Sbjct: 230 FAEMRHEGIQPDLVTYNTLLSACSSRELEDEAEMVFRTMNEAGVLPDVTTYSYLVETFGK 289

Query: 360 TERWDEADELLNEM 401
             + ++  ELL EM
Sbjct: 290 LGKLEKVSELLMEM 303



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 39/132 (29%), Positives = 70/132 (53%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           +ETY  LI++  KGGL+++ + IL  M   G+  +      VIEAY Q   +E+A+ A+ 
Sbjct: 417 METYEGLIYACGKGGLHEDAKRILLHMNGQGLVPSSKVYTAVIEAYGQAALYEEAVVAFN 476

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            M +V   P   T  +++  +   GL  ESE  + ++ E+G+  +   +  M+  Y +  
Sbjct: 477 TMNEVGSRPVVETFNSLIHTFAKGGLYKESEAIWFRMGEVGVPRNRDSFNGMIEGYRQGG 536

Query: 366 RWDEADELLNEM 401
           +++EA +   EM
Sbjct: 537 QFEEAIKAYVEM 548


>ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1 [Theobroma cacao]
            gi|508773299|gb|EOY20555.1| Plastid transcriptionally
            active 2 isoform 1 [Theobroma cacao]
          Length = 859

 Score =  438 bits (1126), Expect = e-120
 Identities = 204/268 (76%), Positives = 238/268 (88%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            TIETYN+L+ +FA+GGLYKE  AILSRM E GV +NRDS N +IEA+RQGGQFEDAIKAY
Sbjct: 486  TIETYNSLLQTFARGGLYKEANAILSRMNETGVAKNRDSFNALIEAFRQGGQFEDAIKAY 545

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEK RCDPDE TLEAVLSVYCFAGLVDES EQFQ+IK LG+ PSVMCYCMMLAVYAK 
Sbjct: 546  VEMEKARCDPDERTLEAVLSVYCFAGLVDESNEQFQEIKALGVLPSVMCYCMMLAVYAKC 605

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
            +RWD+A +L +EM TN+VSNIHQVIG+MI+GD+DD +NWQMVEY FDKLNSEGCGFGIRF
Sbjct: 606  DRWDDAYQLFDEMLTNKVSNIHQVIGKMIRGDYDDDANWQMVEYVFDKLNSEGCGFGIRF 665

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +N +LEALW L QKERAARVL+EATKRG++PEL+RKNKL+WSVDVHRMW GG  TA+S+W
Sbjct: 666  YNALLEALWWLRQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMWEGGTYTAVSIW 725

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            LN+MQ++  +G++LPQLAT VV RG ME
Sbjct: 726  LNSMQKMFLSGDDLPQLATVVVARGQME 753



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 50/210 (23%), Positives = 87/210 (41%)
 Frame = +3

Query: 12   TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
            TYN LI  F +GG +KE   +   M E  ++ N  + +G+I A  +GG  EDA K  + M
Sbjct: 384  TYNILIQVFGEGGYFKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGLHEDAKKILLHM 443

Query: 192  EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
             +    P       V+  Y  A L +E    F  + E+   P++  Y  +L  +A+   +
Sbjct: 444  NEKCIVPSSRAYTGVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGLY 503

Query: 372  DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
             EA+ +L+ M    V+        +I+  F     ++    A+ ++    C    R    
Sbjct: 504  KEANAILSRMNETGVAKNRDSFNALIEA-FRQGGQFEDAIKAYVEMEKARCDPDERTLEA 562

Query: 552  ILEALWCLGQKERAARVLDEATKRGMYPEL 641
            +L      G  + +     E    G+ P +
Sbjct: 563  VLSVYCFAGLVDESNEQFQEIKALGVLPSV 592



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 48/210 (22%), Positives = 96/210 (45%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I TYN L+ + A  GL  E E +   M E G+  +  + + ++E++ + G+ E   +   
Sbjct: 242 IVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVESFGKLGKLEKVSELLK 301

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +ME     PD  +   +L  Y  +G + E+   F+Q++  G  P+   Y ++L +Y +  
Sbjct: 302 EMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQMQVAGCAPNATTYSILLNLYGRNG 361

Query: 366 RWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
           R+D+  EL  EM  +           +I+  F +   ++ V   F  +  E     ++ +
Sbjct: 362 RYDDVRELFLEMKESNTEPDAATYNILIQ-VFGEGGYFKEVVTLFHDMVEENIEPNVKTY 420

Query: 546 NTILEALWCLGQKERAARVLDEATKRGMYP 635
           + ++ A    G  E A ++L    ++ + P
Sbjct: 421 DGLIFACGKGGLHEDAKKILLHMNEKCIVP 450



 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 8/200 (4%)
 Frame = +3

Query: 93  LGVQRNRDSLNG---VIEAYRQGGQFEDAIKAYVDMEK-VRCDPDEYTLEAVLSVYCFAG 260
           L V RN+ SLN    V + +   G ++ +++ +  M++ + C P+E+    ++S+    G
Sbjct: 91  LDVFRNKLSLNDFALVFKEFAHRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREG 150

Query: 261 LVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWDEADELLNEMYTNRVS----NIH 428
           L+++  E F ++   G+  SV  Y  ++  Y +   ++ + ELL++M  ++V       +
Sbjct: 151 LLEKCREVFDEMPSQGVTRSVFAYTALINAYGRNGAYNISLELLDKMKKDKVLPSILTYN 210

Query: 429 QVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNTILEALWCLGQKERAARVLD 608
            VI    +G  D    W+ +   F ++  EG    I  +NT+L A    G    A  V  
Sbjct: 211 TVINACARGGLD----WEGLLGLFAEMRHEGIQPDIVTYNTLLSACANRGLGNEAEMVFR 266

Query: 609 EATKRGMYPELYRKNKLIWS 668
              + G+ P+L   + L+ S
Sbjct: 267 TMNEGGILPDLTTYSYLVES 286



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           ++  Y ALI+++ + G Y  +  +L +M +  V  +  + N VI A  +GG  +E  +  
Sbjct: 170 SVFAYTALINAYGRNGAYNISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGL 229

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +LS     GL +E+E  F+ + E GI P +  Y  ++  + K
Sbjct: 230 FAEMRHEGIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVESFGK 289

Query: 360 TERWDEADELLNEM 401
             + ++  ELL EM
Sbjct: 290 LGKLEKVSELLKEM 303


>ref|XP_006439718.1| hypothetical protein CICLE_v10018817mg [Citrus clementina]
            gi|557541980|gb|ESR52958.1| hypothetical protein
            CICLE_v10018817mg [Citrus clementina]
          Length = 871

 Score =  437 bits (1123), Expect = e-120
 Identities = 207/268 (77%), Positives = 237/268 (88%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            TIETYN+L+H+FA+GGLYKE +AILSRM E GV RN DS N VIEA+RQGG+FE+AIKAY
Sbjct: 497  TIETYNSLLHTFARGGLYKECQAILSRMSESGVARNSDSFNAVIEAFRQGGRFEEAIKAY 556

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEKVRCDP+E TLEAVLSVYCFAGLVDES+EQFQ+IK  GI PSVMCYCM+LAVYAK+
Sbjct: 557  VEMEKVRCDPNERTLEAVLSVYCFAGLVDESKEQFQEIKSSGILPSVMCYCMLLAVYAKS 616

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
             RWD+A  LL+EM+TNR+SNIHQV GQMIKG+FDD SNWQMVEY FDKLN EG G G+RF
Sbjct: 617  NRWDDAYGLLDEMHTNRISNIHQVTGQMIKGEFDDESNWQMVEYVFDKLNCEGYGLGMRF 676

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +N ++EALWCLGQ+ERAARVLDEATKRG++PEL+R NKL+WSVDVHRMW GGA TAISVW
Sbjct: 677  YNALMEALWCLGQRERAARVLDEATKRGLFPELFRHNKLVWSVDVHRMWEGGAYTAISVW 736

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            LN M E+   GE+LPQLAT VVVRG ME
Sbjct: 737  LNKMYEMFMMGEDLPQLATVVVVRGQME 764



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 49/210 (23%), Positives = 87/210 (41%)
 Frame = +3

Query: 12   TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
            TYN LI  F +GG +KE   +   M E  V+ N ++  G+I A  +GG  ED  K  + M
Sbjct: 395  TYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDVKKILLYM 454

Query: 192  EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
             +    P       V+  Y  A L +E+   F  + E+  +P++  Y  +L  +A+   +
Sbjct: 455  NERGTVPSSKAYTGVIEAYGLAALYEEALVAFNTMNEVESKPTIETYNSLLHTFARGGLY 514

Query: 372  DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
             E   +L+ M  + V+        +I+  F     ++    A+ ++    C    R    
Sbjct: 515  KECQAILSRMSESGVARNSDSFNAVIEA-FRQGGRFEEAIKAYVEMEKVRCDPNERTLEA 573

Query: 552  ILEALWCLGQKERAARVLDEATKRGMYPEL 641
            +L      G  + +     E    G+ P +
Sbjct: 574  VLSVYCFAGLVDESKEQFQEIKSSGILPSV 603



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 38/132 (28%), Positives = 67/132 (50%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           +ETY  LI +  KGGL+++ + IL  M E G   +  +  GVIEAY     +E+A+ A+ 
Sbjct: 428 METYEGLIFACGKGGLHEDVKKILLYMNERGTVPSSKAYTGVIEAYGLAALYEEALVAFN 487

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            M +V   P   T  ++L  +   GL  E +    ++ E G+  +   +  ++  + +  
Sbjct: 488 TMNEVESKPTIETYNSLLHTFARGGLYKECQAILSRMSESGVARNSDSFNAVIEAFRQGG 547

Query: 366 RWDEADELLNEM 401
           R++EA +   EM
Sbjct: 548 RFEEAIKAYVEM 559



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           ++ +Y ALI+++ + G Y+ +  +L RM    +  N  + N VI A  +GG  +ED +  
Sbjct: 181 SVFSYTALINAYGRHGQYETSLELLDRMKREKIAPNILTYNTVINACVRGGLDWEDLLGL 240

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +LS     GL DE+E  F+ + E G+ P +  +  ++  + K
Sbjct: 241 FAEMRHEGIQPDIVTYNTLLSACGGRGLGDEAEMVFRTMNEGGVLPDLTTFSYLVETFGK 300

Query: 360 TERWDEADELLNEM 401
             + ++  ELL EM
Sbjct: 301 LGKLEKVSELLREM 314



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 45/191 (23%), Positives = 93/191 (48%), Gaps = 8/191 (4%)
 Frame = +3

Query: 93  LGVQRNRDSLNG---VIEAYRQGGQFEDAIKAYVDMEK-VRCDPDEYTLEAVLSVYCFAG 260
           L + +N+ SLN    V + + Q G ++ +++ +  M++ + C P E     ++S+     
Sbjct: 102 LDMFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPSEQIYTIMISLLGREN 161

Query: 261 LVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWDEADELLNEMYTNRVS----NIH 428
           L+D++ E F+++   G+  SV  Y  ++  Y +  +++ + ELL+ M   +++      +
Sbjct: 162 LLDKASEVFEEMPSQGVARSVFSYTALINAYGRHGQYETSLELLDRMKREKIAPNILTYN 221

Query: 429 QVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNTILEALWCLGQKERAARVLD 608
            VI   ++G  D    W+ +   F ++  EG    I  +NT+L A    G  + A  V  
Sbjct: 222 TVINACVRGGLD----WEDLLGLFAEMRHEGIQPDIVTYNTLLSACGGRGLGDEAEMVFR 277

Query: 609 EATKRGMYPEL 641
              + G+ P+L
Sbjct: 278 TMNEGGVLPDL 288



 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 47/210 (22%), Positives = 89/210 (42%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I TYN L+ +    GL  E E +   M E GV  +  + + ++E + + G+ E   +   
Sbjct: 253 IVTYNTLLSACGGRGLGDEAEMVFRTMNEGGVLPDLTTFSYLVETFGKLGKLEKVSELLR 312

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +ME     PD      +L  +   G + E+ + F+Q++  G   +   Y ++L +Y +  
Sbjct: 313 EMESGGNLPDVTCYNVLLEAHAKMGSIKEAMDVFRQMQAAGSVANATTYSILLNLYGRNG 372

Query: 366 RWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
           R+D+  EL  EM  +           +I+  F +   ++ V   F  +  E     +  +
Sbjct: 373 RYDDVRELFLEMKASNTEPNAATYNILIQ-VFGEGGYFKEVVTLFHDMVEENVEPNMETY 431

Query: 546 NTILEALWCLGQKERAARVLDEATKRGMYP 635
             ++ A    G  E   ++L    +RG  P
Sbjct: 432 EGLIFACGKGGLHEDVKKILLYMNERGTVP 461


>ref|XP_006476695.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like [Citrus sinensis]
          Length = 871

 Score =  436 bits (1120), Expect = e-120
 Identities = 207/268 (77%), Positives = 236/268 (88%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            TIETYN+L+H+F++GGLYKE +AILSRM E GV RN DS N VIEA+RQGG+FE+AIKAY
Sbjct: 497  TIETYNSLLHTFSRGGLYKECQAILSRMSESGVARNSDSFNAVIEAFRQGGRFEEAIKAY 556

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEKVRCDP+E TLEAVLSVYCFAGLVDES+EQFQ+IK  GI PSVMCYCM+LAVYAK+
Sbjct: 557  VEMEKVRCDPNERTLEAVLSVYCFAGLVDESKEQFQEIKSSGILPSVMCYCMLLAVYAKS 616

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
             RWD+A  LL+EMYTNR+SNIHQV GQMIKG+FDD SNWQMVEY FDKLN EG G G+RF
Sbjct: 617  NRWDDAYGLLDEMYTNRISNIHQVTGQMIKGEFDDESNWQMVEYVFDKLNCEGYGLGMRF 676

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +N +LEALWCLG +ERAARVLDEATKRG++PEL+R NKL+WSVDVHRMW GGA TAISVW
Sbjct: 677  YNALLEALWCLGLRERAARVLDEATKRGLFPELFRHNKLVWSVDVHRMWEGGAYTAISVW 736

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            LN M E+   GE+LPQLAT VVVRG ME
Sbjct: 737  LNKMYEMFMMGEDLPQLATVVVVRGRME 764



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 48/210 (22%), Positives = 87/210 (41%)
 Frame = +3

Query: 12   TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
            TYN LI  F +GG +KE   +   M E  V+ N ++  G+I A  +GG  ED  K  + M
Sbjct: 395  TYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDVKKILLYM 454

Query: 192  EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
             +    P       V+  Y  A L +E+   F  + E+  +P++  Y  +L  +++   +
Sbjct: 455  NERGTVPSSKAYTGVIEAYGLAALYEEALVAFNTMNEVESKPTIETYNSLLHTFSRGGLY 514

Query: 372  DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
             E   +L+ M  + V+        +I+  F     ++    A+ ++    C    R    
Sbjct: 515  KECQAILSRMSESGVARNSDSFNAVIEA-FRQGGRFEEAIKAYVEMEKVRCDPNERTLEA 573

Query: 552  ILEALWCLGQKERAARVLDEATKRGMYPEL 641
            +L      G  + +     E    G+ P +
Sbjct: 574  VLSVYCFAGLVDESKEQFQEIKSSGILPSV 603



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           ++ +Y ALI+++ + G Y+ +  +L RM    +  N  + N VI A  +GG  +ED +  
Sbjct: 181 SVFSYTALINAYGRHGQYETSLELLDRMKREKIAPNILTYNTVINACVRGGLDWEDLLGL 240

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +LS     GL DE+E  F+ + E G+ P +  +  ++  + K
Sbjct: 241 FAEMRHEGIQPDIVTYNTLLSACGSRGLGDEAEMVFRTMNEGGVLPDLTTFSYLVETFGK 300

Query: 360 TERWDEADELLNEM 401
             + ++  ELL EM
Sbjct: 301 LGKLEKVSELLREM 314



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 38/132 (28%), Positives = 67/132 (50%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           +ETY  LI +  KGGL+++ + IL  M E G   +  +  GVIEAY     +E+A+ A+ 
Sbjct: 428 METYEGLIFACGKGGLHEDVKKILLYMNERGTVPSSKAYTGVIEAYGLAALYEEALVAFN 487

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            M +V   P   T  ++L  +   GL  E +    ++ E G+  +   +  ++  + +  
Sbjct: 488 TMNEVESKPTIETYNSLLHTFSRGGLYKECQAILSRMSESGVARNSDSFNAVIEAFRQGG 547

Query: 366 RWDEADELLNEM 401
           R++EA +   EM
Sbjct: 548 RFEEAIKAYVEM 559



 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 45/191 (23%), Positives = 93/191 (48%), Gaps = 8/191 (4%)
 Frame = +3

Query: 93  LGVQRNRDSLNG---VIEAYRQGGQFEDAIKAYVDMEK-VRCDPDEYTLEAVLSVYCFAG 260
           L + +N+ SLN    V + + Q G ++ +++ +  M++ + C P E     ++S+     
Sbjct: 102 LDMFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPSEQIYTIMISLLGREN 161

Query: 261 LVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWDEADELLNEMYTNRVS----NIH 428
           L+D++ E F+++   G+  SV  Y  ++  Y +  +++ + ELL+ M   +++      +
Sbjct: 162 LLDKASEVFEEMPSQGVPRSVFSYTALINAYGRHGQYETSLELLDRMKREKIAPNILTYN 221

Query: 429 QVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNTILEALWCLGQKERAARVLD 608
            VI   ++G  D    W+ +   F ++  EG    I  +NT+L A    G  + A  V  
Sbjct: 222 TVINACVRGGLD----WEDLLGLFAEMRHEGIQPDIVTYNTLLSACGSRGLGDEAEMVFR 277

Query: 609 EATKRGMYPEL 641
              + G+ P+L
Sbjct: 278 TMNEGGVLPDL 288



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 47/210 (22%), Positives = 89/210 (42%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I TYN L+ +    GL  E E +   M E GV  +  + + ++E + + G+ E   +   
Sbjct: 253 IVTYNTLLSACGSRGLGDEAEMVFRTMNEGGVLPDLTTFSYLVETFGKLGKLEKVSELLR 312

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +ME     PD      +L  +   G + E+ + F+Q++  G   +   Y ++L +Y +  
Sbjct: 313 EMESGGNLPDVTCYNVLLEAHAKMGSIKEAMDVFRQMQAAGSVANATTYSILLNLYGRNG 372

Query: 366 RWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
           R+D+  EL  EM  +           +I+  F +   ++ V   F  +  E     +  +
Sbjct: 373 RYDDVRELFLEMKASNTEPNAATYNILIQ-VFGEGGYFKEVVTLFHDMVEENVEPNMETY 431

Query: 546 NTILEALWCLGQKERAARVLDEATKRGMYP 635
             ++ A    G  E   ++L    +RG  P
Sbjct: 432 EGLIFACGKGGLHEDVKKILLYMNERGTVP 461


>ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3 [Theobroma cacao]
            gi|508773301|gb|EOY20557.1| Plastid transcriptionally
            active 2 isoform 3 [Theobroma cacao]
          Length = 811

 Score =  430 bits (1105), Expect = e-118
 Identities = 200/262 (76%), Positives = 234/262 (89%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            TIETYN+L+ +FA+GGLYKE  AILSRM E GV +NRDS N +IEA+RQGGQFEDAIKAY
Sbjct: 486  TIETYNSLLQTFARGGLYKEANAILSRMNETGVAKNRDSFNALIEAFRQGGQFEDAIKAY 545

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEK RCDPDE TLEAVLSVYCFAGLVDES EQFQ+IK LG+ PSVMCYCMMLAVYAK 
Sbjct: 546  VEMEKARCDPDERTLEAVLSVYCFAGLVDESNEQFQEIKALGVLPSVMCYCMMLAVYAKC 605

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
            +RWD+A +L +EM TN+VSNIHQVIG+MI+GD+DD +NWQMVEY FDKLNSEGCGFGIRF
Sbjct: 606  DRWDDAYQLFDEMLTNKVSNIHQVIGKMIRGDYDDDANWQMVEYVFDKLNSEGCGFGIRF 665

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +N +LEALW L QKERAARVL+EATKRG++PEL+RKNKL+WSVDVHRMW GG  TA+S+W
Sbjct: 666  YNALLEALWWLRQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMWEGGTYTAVSIW 725

Query: 723  LNNMQELVTNGEELPQLATTVV 788
            LN+MQ++  +G++LPQLAT VV
Sbjct: 726  LNSMQKMFLSGDDLPQLATVVV 747



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 50/210 (23%), Positives = 87/210 (41%)
 Frame = +3

Query: 12   TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
            TYN LI  F +GG +KE   +   M E  ++ N  + +G+I A  +GG  EDA K  + M
Sbjct: 384  TYNILIQVFGEGGYFKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGLHEDAKKILLHM 443

Query: 192  EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
             +    P       V+  Y  A L +E    F  + E+   P++  Y  +L  +A+   +
Sbjct: 444  NEKCIVPSSRAYTGVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGLY 503

Query: 372  DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
             EA+ +L+ M    V+        +I+  F     ++    A+ ++    C    R    
Sbjct: 504  KEANAILSRMNETGVAKNRDSFNALIEA-FRQGGQFEDAIKAYVEMEKARCDPDERTLEA 562

Query: 552  ILEALWCLGQKERAARVLDEATKRGMYPEL 641
            +L      G  + +     E    G+ P +
Sbjct: 563  VLSVYCFAGLVDESNEQFQEIKALGVLPSV 592



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 48/210 (22%), Positives = 96/210 (45%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I TYN L+ + A  GL  E E +   M E G+  +  + + ++E++ + G+ E   +   
Sbjct: 242 IVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVESFGKLGKLEKVSELLK 301

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +ME     PD  +   +L  Y  +G + E+   F+Q++  G  P+   Y ++L +Y +  
Sbjct: 302 EMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQMQVAGCAPNATTYSILLNLYGRNG 361

Query: 366 RWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
           R+D+  EL  EM  +           +I+  F +   ++ V   F  +  E     ++ +
Sbjct: 362 RYDDVRELFLEMKESNTEPDAATYNILIQ-VFGEGGYFKEVVTLFHDMVEENIEPNVKTY 420

Query: 546 NTILEALWCLGQKERAARVLDEATKRGMYP 635
           + ++ A    G  E A ++L    ++ + P
Sbjct: 421 DGLIFACGKGGLHEDAKKILLHMNEKCIVP 450



 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 8/200 (4%)
 Frame = +3

Query: 93  LGVQRNRDSLNG---VIEAYRQGGQFEDAIKAYVDMEK-VRCDPDEYTLEAVLSVYCFAG 260
           L V RN+ SLN    V + +   G ++ +++ +  M++ + C P+E+    ++S+    G
Sbjct: 91  LDVFRNKLSLNDFALVFKEFAHRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREG 150

Query: 261 LVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWDEADELLNEMYTNRVS----NIH 428
           L+++  E F ++   G+  SV  Y  ++  Y +   ++ + ELL++M  ++V       +
Sbjct: 151 LLEKCREVFDEMPSQGVTRSVFAYTALINAYGRNGAYNISLELLDKMKKDKVLPSILTYN 210

Query: 429 QVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNTILEALWCLGQKERAARVLD 608
            VI    +G  D    W+ +   F ++  EG    I  +NT+L A    G    A  V  
Sbjct: 211 TVINACARGGLD----WEGLLGLFAEMRHEGIQPDIVTYNTLLSACANRGLGNEAEMVFR 266

Query: 609 EATKRGMYPELYRKNKLIWS 668
              + G+ P+L   + L+ S
Sbjct: 267 TMNEGGILPDLTTYSYLVES 286



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           ++  Y ALI+++ + G Y  +  +L +M +  V  +  + N VI A  +GG  +E  +  
Sbjct: 170 SVFAYTALINAYGRNGAYNISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGL 229

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +LS     GL +E+E  F+ + E GI P +  Y  ++  + K
Sbjct: 230 FAEMRHEGIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVESFGK 289

Query: 360 TERWDEADELLNEM 401
             + ++  ELL EM
Sbjct: 290 LGKLEKVSELLKEM 303


>ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2 [Theobroma cacao]
            gi|508773300|gb|EOY20556.1| Plastid transcriptionally
            active 2 isoform 2 [Theobroma cacao]
          Length = 770

 Score =  430 bits (1105), Expect = e-118
 Identities = 200/262 (76%), Positives = 234/262 (89%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            TIETYN+L+ +FA+GGLYKE  AILSRM E GV +NRDS N +IEA+RQGGQFEDAIKAY
Sbjct: 486  TIETYNSLLQTFARGGLYKEANAILSRMNETGVAKNRDSFNALIEAFRQGGQFEDAIKAY 545

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEK RCDPDE TLEAVLSVYCFAGLVDES EQFQ+IK LG+ PSVMCYCMMLAVYAK 
Sbjct: 546  VEMEKARCDPDERTLEAVLSVYCFAGLVDESNEQFQEIKALGVLPSVMCYCMMLAVYAKC 605

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
            +RWD+A +L +EM TN+VSNIHQVIG+MI+GD+DD +NWQMVEY FDKLNSEGCGFGIRF
Sbjct: 606  DRWDDAYQLFDEMLTNKVSNIHQVIGKMIRGDYDDDANWQMVEYVFDKLNSEGCGFGIRF 665

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +N +LEALW L QKERAARVL+EATKRG++PEL+RKNKL+WSVDVHRMW GG  TA+S+W
Sbjct: 666  YNALLEALWWLRQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMWEGGTYTAVSIW 725

Query: 723  LNNMQELVTNGEELPQLATTVV 788
            LN+MQ++  +G++LPQLAT VV
Sbjct: 726  LNSMQKMFLSGDDLPQLATVVV 747



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 50/210 (23%), Positives = 87/210 (41%)
 Frame = +3

Query: 12   TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
            TYN LI  F +GG +KE   +   M E  ++ N  + +G+I A  +GG  EDA K  + M
Sbjct: 384  TYNILIQVFGEGGYFKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGLHEDAKKILLHM 443

Query: 192  EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
             +    P       V+  Y  A L +E    F  + E+   P++  Y  +L  +A+   +
Sbjct: 444  NEKCIVPSSRAYTGVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGLY 503

Query: 372  DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
             EA+ +L+ M    V+        +I+  F     ++    A+ ++    C    R    
Sbjct: 504  KEANAILSRMNETGVAKNRDSFNALIEA-FRQGGQFEDAIKAYVEMEKARCDPDERTLEA 562

Query: 552  ILEALWCLGQKERAARVLDEATKRGMYPEL 641
            +L      G  + +     E    G+ P +
Sbjct: 563  VLSVYCFAGLVDESNEQFQEIKALGVLPSV 592



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 48/210 (22%), Positives = 96/210 (45%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I TYN L+ + A  GL  E E +   M E G+  +  + + ++E++ + G+ E   +   
Sbjct: 242 IVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVESFGKLGKLEKVSELLK 301

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +ME     PD  +   +L  Y  +G + E+   F+Q++  G  P+   Y ++L +Y +  
Sbjct: 302 EMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQMQVAGCAPNATTYSILLNLYGRNG 361

Query: 366 RWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
           R+D+  EL  EM  +           +I+  F +   ++ V   F  +  E     ++ +
Sbjct: 362 RYDDVRELFLEMKESNTEPDAATYNILIQ-VFGEGGYFKEVVTLFHDMVEENIEPNVKTY 420

Query: 546 NTILEALWCLGQKERAARVLDEATKRGMYP 635
           + ++ A    G  E A ++L    ++ + P
Sbjct: 421 DGLIFACGKGGLHEDAKKILLHMNEKCIVP 450



 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 8/200 (4%)
 Frame = +3

Query: 93  LGVQRNRDSLNG---VIEAYRQGGQFEDAIKAYVDMEK-VRCDPDEYTLEAVLSVYCFAG 260
           L V RN+ SLN    V + +   G ++ +++ +  M++ + C P+E+    ++S+    G
Sbjct: 91  LDVFRNKLSLNDFALVFKEFAHRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREG 150

Query: 261 LVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWDEADELLNEMYTNRVS----NIH 428
           L+++  E F ++   G+  SV  Y  ++  Y +   ++ + ELL++M  ++V       +
Sbjct: 151 LLEKCREVFDEMPSQGVTRSVFAYTALINAYGRNGAYNISLELLDKMKKDKVLPSILTYN 210

Query: 429 QVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNTILEALWCLGQKERAARVLD 608
            VI    +G  D    W+ +   F ++  EG    I  +NT+L A    G    A  V  
Sbjct: 211 TVINACARGGLD----WEGLLGLFAEMRHEGIQPDIVTYNTLLSACANRGLGNEAEMVFR 266

Query: 609 EATKRGMYPELYRKNKLIWS 668
              + G+ P+L   + L+ S
Sbjct: 267 TMNEGGILPDLTTYSYLVES 286



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           ++  Y ALI+++ + G Y  +  +L +M +  V  +  + N VI A  +GG  +E  +  
Sbjct: 170 SVFAYTALINAYGRNGAYNISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGL 229

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +LS     GL +E+E  F+ + E GI P +  Y  ++  + K
Sbjct: 230 FAEMRHEGIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVESFGK 289

Query: 360 TERWDEADELLNEM 401
             + ++  ELL EM
Sbjct: 290 LGKLEKVSELLKEM 303


>ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Populus trichocarpa]
            gi|550322283|gb|EEF06266.2| hypothetical protein
            POPTR_0015s08030g [Populus trichocarpa]
          Length = 866

 Score =  424 bits (1091), Expect = e-116
 Identities = 204/268 (76%), Positives = 232/268 (86%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            TIETYN LI+ FA+GGLYKETEAIL +MG+ GV R RDS NGVIE +RQGGQFE+AIKAY
Sbjct: 493  TIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAY 552

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEK R  PDE TLEAVLSVYC AGLVDES EQFQ+IK  GI P+VMCYCMMLAVYAK+
Sbjct: 553  VEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKS 612

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
            +RW+EA ELL+EM TNR SNIHQVIGQMIKGDFDD SNWQMVEY FDKLNSEGCG G+RF
Sbjct: 613  DRWNEAYELLDEMLTNRASNIHQVIGQMIKGDFDDDSNWQMVEYVFDKLNSEGCGLGMRF 672

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +NT+LEALW LGQKERA RVL EATKRG +PEL+RK+KL+WSVD+HRMW G A TAISVW
Sbjct: 673  YNTLLEALWWLGQKERAVRVLGEATKRGHFPELFRKSKLVWSVDIHRMWEGSAYTAISVW 732

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            LNNM E+  N +++PQLA+ +VVRG +E
Sbjct: 733  LNNMYEIFMNRQDIPQLASVIVVRGLLE 760



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           ++ +Y ALI+S+ + G Y+ +  +L RM +  V  +  + N VI +  +GG  +E  +  
Sbjct: 177 SVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGL 236

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +L      GL DE+E  F+ + E G+ P +  Y  ++  + K
Sbjct: 237 FAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGK 296

Query: 360 TERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIR 539
             R D+  ELL EM +               G+  + S++ ++  A+ ++ +     G+ 
Sbjct: 297 LNRLDKVSELLKEMAST--------------GNVPEISSYNVLLEAYARIGNIEDATGV- 341

Query: 540 FFNTILEALWCLGQKERAARVLDEATKRGMYPEL 641
            F  + EA  C+   E  + +L    K G Y E+
Sbjct: 342 -FRLMQEA-GCVPNAETYSILLGLYGKHGRYDEV 373



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 47/210 (22%), Positives = 89/210 (42%)
 Frame = +3

Query: 12   TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
            TYN LI  F +GG +KE   +   M E  V+ N ++  G+I A  +GG  +DA K  + M
Sbjct: 391  TYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHM 450

Query: 192  EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
             +    P       V+  Y  A + +E+      + E+G +P++  Y  ++ ++A+   +
Sbjct: 451  SEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLY 510

Query: 372  DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
             E + +L +M    V+        +I+G F     ++    A+ ++         R    
Sbjct: 511  KETEAILLKMGDFGVARERDSFNGVIEG-FRQGGQFEEAIKAYVEMEKSRLVPDERTLEA 569

Query: 552  ILEALWCLGQKERAARVLDEATKRGMYPEL 641
            +L      G  + +     E    G+ P +
Sbjct: 570  VLSVYCIAGLVDESVEQFQEIKASGILPNV 599



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 47/191 (24%), Positives = 93/191 (48%), Gaps = 8/191 (4%)
 Frame = +3

Query: 93  LGVQRNRDSLNG---VIEAYRQGGQFEDAIKAYVDMEK-VRCDPDEYTLEAVLSVYCFAG 260
           L V +N+ SLN    V + + Q G ++ +++ +  M++ + C P+E+    ++S+    G
Sbjct: 98  LDVFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREG 157

Query: 261 LVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWDEADELLNEMYTNRVS----NIH 428
           L+++  + F+++   G+  SV  Y  ++  Y +  +++ + ELL  M   RVS      +
Sbjct: 158 LLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYN 217

Query: 429 QVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNTILEALWCLGQKERAARVLD 608
            VI    +G  D    W+ +   F ++  EG    I  +NT+L A    G  + A  V  
Sbjct: 218 TVINSCARGGLD----WEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFR 273

Query: 609 EATKRGMYPEL 641
              + G+ P++
Sbjct: 274 TMNEGGVVPDI 284



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 52/224 (23%), Positives = 91/224 (40%), Gaps = 4/224 (1%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I TY  L+ +F K     +   +L  M   G      S N ++EAY + G  EDA   + 
Sbjct: 284 ITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFR 343

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            M++  C P+  T   +L +Y   G  DE  E F ++K    +P    Y  ++ V+ +  
Sbjct: 344 LMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGG 403

Query: 366 RWDEADELLNEMYTNRVSNIHQVIGQMI----KGDFDDTSNWQMVEYAFDKLNSEGCGFG 533
            + E   L ++M    V    +    +I    KG   D +   ++      ++ +G    
Sbjct: 404 YFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLH-----MSEKGMIPS 458

Query: 534 IRFFNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIW 665
            + +  ++EA       E A   L+   + G  P +   N LI+
Sbjct: 459 SKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIY 502



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 45/210 (21%), Positives = 91/210 (43%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I TYN L+ + +  GL  E E +   M E GV  +  +   +++ + +  + +   +   
Sbjct: 249 IVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLK 308

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +M      P+  +   +L  Y   G ++++   F+ ++E G  P+   Y ++L +Y K  
Sbjct: 309 EMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHG 368

Query: 366 RWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
           R+DE  EL  EM  +           +I   F +   ++ V   F  +  E     +  +
Sbjct: 369 RYDEVRELFLEMKVSNTEPDAATYNTLI-DVFGEGGYFKEVVTLFHDMAEENVEPNMETY 427

Query: 546 NTILEALWCLGQKERAARVLDEATKRGMYP 635
             ++ A    G  + A ++L   +++GM P
Sbjct: 428 EGLIFACGKGGLHDDAKKILLHMSEKGMIP 457


>ref|XP_007210369.1| hypothetical protein PRUPE_ppa001337mg [Prunus persica]
            gi|462406104|gb|EMJ11568.1| hypothetical protein
            PRUPE_ppa001337mg [Prunus persica]
          Length = 850

 Score =  420 bits (1079), Expect = e-115
 Identities = 197/268 (73%), Positives = 235/268 (87%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            ++E+YN+LI++FA+GGLY+ETEA+LS MGE+G  RN  + NG+IEA+RQGGQFE+AIKAY
Sbjct: 476  SVESYNSLIYAFARGGLYRETEAVLSIMGEVGAARNVHTFNGMIEAFRQGGQFEEAIKAY 535

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEK RCD DE+TLEAVLSVYC AGLV+E EE FQ++K  GI PSVMCYCMMLAVYA+ 
Sbjct: 536  VEMEKRRCDHDEWTLEAVLSVYCVAGLVNECEEHFQEMKASGILPSVMCYCMMLAVYARN 595

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
            +RWD+A+ELLNEM TNR SNIHQVIGQMIKGD+DD SNWQMVEY FDKL SEGCG G+RF
Sbjct: 596  DRWDDANELLNEMLTNRASNIHQVIGQMIKGDYDDDSNWQMVEYVFDKLKSEGCGLGMRF 655

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +NT+LEALW LGQK+RA RVL+EAT+RG++PEL+RKNKL+ SVDVHRMW GGA  A+SVW
Sbjct: 656  YNTLLEALWWLGQKQRAVRVLNEATQRGLFPELFRKNKLVGSVDVHRMWQGGAYAAMSVW 715

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            LNNM E+  NGE+LP +AT VVVRG ME
Sbjct: 716  LNNMYEMFLNGEDLPNIATVVVVRGKME 743



 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 53/211 (25%), Positives = 87/211 (41%), Gaps = 1/211 (0%)
 Frame = +3

Query: 12   TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
            TYN LI  F +GG +KE   +   M E  ++ N ++  G+I A  +GG  EDA    + M
Sbjct: 374  TYNILIQVFGEGGYFKEVVTLFHDMVEENIEPNMETYEGLIYACGKGGLHEDAKNILLHM 433

Query: 192  EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
             +    P       V+  Y  A L DE+   F  + E+G +PSV  Y  ++  +A+   +
Sbjct: 434  SEKGIVPSSKAYTGVIEAYGQAALYDEALVAFNTMNEVGSKPSVESYNSLIYAFARGGLY 493

Query: 372  DEADELLNEM-YTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFN 548
             E + +L+ M       N+H   G MI+  F     ++    A+ ++    C        
Sbjct: 494  RETEAVLSIMGEVGAARNVHTFNG-MIEA-FRQGGQFEEAIKAYVEMEKRRCDHDEWTLE 551

Query: 549  TILEALWCLGQKERAARVLDEATKRGMYPEL 641
             +L      G          E    G+ P +
Sbjct: 552  AVLSVYCVAGLVNECEEHFQEMKASGILPSV 582



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 39/136 (28%), Positives = 72/136 (52%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           +ETY  LI++  KGGL+++ + IL  M E G+  +  +  GVIEAY Q   +++A+ A+ 
Sbjct: 407 METYEGLIYACGKGGLHEDAKNILLHMSEKGIVPSSKAYTGVIEAYGQAALYDEALVAFN 466

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            M +V   P   +  +++  +   GL  E+E     + E+G   +V  +  M+  + +  
Sbjct: 467 TMNEVGSKPSVESYNSLIYAFARGGLYRETEAVLSIMGEVGAARNVHTFNGMIEAFRQGG 526

Query: 366 RWDEADELLNEMYTNR 413
           +++EA +   EM   R
Sbjct: 527 QFEEAIKAYVEMEKRR 542



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 1/214 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           ++ +Y ALI+++ + G Y+ +   L RM +  V  +  + N V+ A  +GG ++E  +  
Sbjct: 160 SVFSYTALINAYGRNGQYETSLQFLDRMKKDKVSPSILTYNTVLNACARGGLEWEGLLGL 219

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +LS     GL DE+E  F+ + E GI P +  Y  ++  + K
Sbjct: 220 FAEMRHEGIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITTYRYLVETFGK 279

Query: 360 TERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIR 539
            ++ ++  ELL EM +               G+  D +++ ++  A+ +L S     G+ 
Sbjct: 280 LDKLEKVSELLKEMESG--------------GNLPDITSYNVLLEAYAQLGSIRESMGV- 324

Query: 540 FFNTILEALWCLGQKERAARVLDEATKRGMYPEL 641
            F   ++A  C+      + +L+   + G Y ++
Sbjct: 325 -FRQ-MQAAGCMPNAATYSILLNLYGRHGRYDDV 356



 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 48/208 (23%), Positives = 90/208 (43%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TYN L+ + A  GL  E E +   M E G+  +  +   ++E + +  + E   +   +M
Sbjct: 234 TYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITTYRYLVETFGKLDKLEKVSELLKEM 293

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
           E     PD  +   +L  Y   G + ES   F+Q++  G  P+   Y ++L +Y +  R+
Sbjct: 294 ESGGNLPDITSYNVLLEAYAQLGSIRESMGVFRQMQAAGCMPNAATYSILLNLYGRHGRY 353

Query: 372 DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
           D+  EL  EM  +           +I+  F +   ++ V   F  +  E     +  +  
Sbjct: 354 DDVRELFLEMKISNTEPDPATYNILIQ-VFGEGGYFKEVVTLFHDMVEENIEPNMETYEG 412

Query: 552 ILEALWCLGQKERAARVLDEATKRGMYP 635
           ++ A    G  E A  +L   +++G+ P
Sbjct: 413 LIYACGKGGLHEDAKNILLHMSEKGIVP 440


>ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 862

 Score =  417 bits (1071), Expect = e-114
 Identities = 194/268 (72%), Positives = 232/268 (86%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            ++E++N+LIH++A+GGLYKETE +LS MGE G+  N  S NG+IEA+RQGGQFE+AIK Y
Sbjct: 488  SVESFNSLIHAYARGGLYKETEQVLSIMGEFGIAINASSFNGMIEAFRQGGQFEEAIKTY 547

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEK RCDPDE TLEAVLSVY  AGLV+E EE F++IK  GI PSVMCYCMMLAVYAKT
Sbjct: 548  VEMEKRRCDPDECTLEAVLSVYSVAGLVNECEEHFEEIKASGILPSVMCYCMMLAVYAKT 607

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
            +RWD+A++LLNEM TNRVSNIHQV+GQMIKGD+DD SNWQMVEY FDKL SEGCG G+RF
Sbjct: 608  DRWDDANKLLNEMLTNRVSNIHQVMGQMIKGDYDDESNWQMVEYVFDKLKSEGCGLGMRF 667

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +NT++EALW LGQK+RA RVL EAT+RG++PEL RKNKL+WS+DVHRMW GGA  A+SVW
Sbjct: 668  YNTLIEALWWLGQKQRAVRVLSEATQRGLFPELLRKNKLVWSIDVHRMWEGGAYAAMSVW 727

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            LN+M E+  NGE+LP +AT VVVRG ME
Sbjct: 728  LNDMYEMFLNGEDLPHVATVVVVRGKME 755



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 38/130 (29%), Positives = 63/130 (48%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TYN LI  F +GG ++E   +   M E  ++ N ++  G+I A  +GG  EDA    + M
Sbjct: 386 TYNILIQVFGEGGYFREVVTLFHDMVEENIEPNMETYEGLIYACGKGGLHEDAKNILLHM 445

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
            +    P        +  Y  A L DE+   F  + E+G  PSV  +  ++  YA+   +
Sbjct: 446 NEKGIVPSSKAYTGAIEAYGQAALYDEALVAFNTMNEVGSSPSVESFNSLIHAYARGGLY 505

Query: 372 DEADELLNEM 401
            E +++L+ M
Sbjct: 506 KETEQVLSIM 515



 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 1/214 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           ++ +Y ALI+++ + G ++ +  +L RM +  V  N  + N V+ A  +GG  +E  +  
Sbjct: 172 SVFSYTALINAYGRNGQFEMSLQLLDRMKKDKVSPNILTYNTVLNACARGGLDWEGLLGL 231

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +LS     GL DE+E  F+ + E GI P +  Y  ++  + K
Sbjct: 232 FAEMRHEGVQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITTYSYLVETFGK 291

Query: 360 TERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIR 539
               ++  ELL  M +               G+  D +++ ++  A+ +L S     G+ 
Sbjct: 292 LNNLEKVSELLKGMESG--------------GNLPDITSYNVLLEAYAQLGSIKEAMGV- 336

Query: 540 FFNTILEALWCLGQKERAARVLDEATKRGMYPEL 641
            F  + EA  C+      + +L+   + G Y ++
Sbjct: 337 -FRQMQEA-GCMANAATYSILLNLYGRLGRYDDV 368



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 39/186 (20%), Positives = 84/186 (45%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I +YN L+ ++A+ G  KE   +  +M E G   N  + + ++  Y + G+++D  + ++
Sbjct: 314 ITSYNVLLEAYAQLGSIKEAMGVFRQMQEAGCMANAATYSILLNLYGRLGRYDDVRELFL 373

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +M+    +PD  T   ++ V+   G   E    F  + E  I+P++  Y  ++    K  
Sbjct: 374 EMKVSNAEPDAATYNILIQVFGEGGYFREVVTLFHDMVEENIEPNMETYEGLIYACGKGG 433

Query: 366 RWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
             ++A  +L  M    +    +     I+  +   + +     AF+ +N  G    +  F
Sbjct: 434 LHEDAKNILLHMNEKGIVPSSKAYTGAIEA-YGQAALYDEALVAFNTMNEVGSSPSVESF 492

Query: 546 NTILEA 563
           N+++ A
Sbjct: 493 NSLIHA 498



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 47/208 (22%), Positives = 88/208 (42%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TYN L+ + A  GL  E E +   M E G+  +  + + ++E + +    E   +    M
Sbjct: 246 TYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITTYSYLVETFGKLNNLEKVSELLKGM 305

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
           E     PD  +   +L  Y   G + E+   F+Q++E G   +   Y ++L +Y +  R+
Sbjct: 306 ESGGNLPDITSYNVLLEAYAQLGSIKEAMGVFRQMQEAGCMANAATYSILLNLYGRLGRY 365

Query: 372 DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
           D+  EL  EM  +           +I+  F +   ++ V   F  +  E     +  +  
Sbjct: 366 DDVRELFLEMKVSNAEPDAATYNILIQ-VFGEGGYFREVVTLFHDMVEENIEPNMETYEG 424

Query: 552 ILEALWCLGQKERAARVLDEATKRGMYP 635
           ++ A    G  E A  +L    ++G+ P
Sbjct: 425 LIYACGKGGLHEDAKNILLHMNEKGIVP 452



 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 44/198 (22%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
 Frame = +3

Query: 93  LGVQRNRDSLNG---VIEAYRQGGQFEDAIKAYVDMEK-VRCDPDEYTLEAVLSVYCFAG 260
           L + +N+ SLN    V + +   G ++ +++ +  M++ + C P E+    ++S+    G
Sbjct: 93  LDIFKNKLSLNDFALVFKEFAARGDWQRSLRLFKYMQRQIWCKPSEHIYTIMISLLGREG 152

Query: 261 LVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWDEADELLNEMYTNRVS----NIH 428
           L+D+  E F ++   G+  SV  Y  ++  Y +  +++ + +LL+ M  ++VS      +
Sbjct: 153 LLDKCAEIFDEMPTQGVIRSVFSYTALINAYGRNGQFEMSLQLLDRMKKDKVSPNILTYN 212

Query: 429 QVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNTILEALWCLGQKERAARVLD 608
            V+    +G  D    W+ +   F ++  EG    +  +NT+L A    G  + A  V  
Sbjct: 213 TVLNACARGGLD----WEGLLGLFAEMRHEGVQPDLVTYNTLLSACAGRGLGDEAEMVFR 268

Query: 609 EATKRGMYPELYRKNKLI 662
              + G+ P++   + L+
Sbjct: 269 TMNEGGIVPDITTYSYLV 286


>ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550592|gb|EEF52079.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 754

 Score =  415 bits (1067), Expect = e-114
 Identities = 193/263 (73%), Positives = 230/263 (87%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            T+ETYN+LI+ FA+GGLYKE+EAI+ +MGE GV R+RDS NGVIE YRQGGQFE+AIK Y
Sbjct: 492  TVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTY 551

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V++EK R  PDE T EAVLSVYC AGLVDESEEQF++I+  GI PSVMCYCMM+AVYA++
Sbjct: 552  VELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARS 611

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
             RWD+A E+L+EM TN+VSNIHQV+G+M+KGD+DD SNWQMVEY FDKLNSEGCG G+RF
Sbjct: 612  NRWDDAYEVLDEMVTNKVSNIHQVVGKMMKGDYDDYSNWQMVEYVFDKLNSEGCGLGMRF 671

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +NT+LEALW LGQKERAARVL EA KRG++PEL+RK+KL+WSVDVHRMW GGACTAISVW
Sbjct: 672  YNTLLEALWWLGQKERAARVLSEAIKRGLFPELFRKSKLVWSVDVHRMWEGGACTAISVW 731

Query: 723  LNNMQELVTNGEELPQLATTVVV 791
            LNNM E+   GE+LP +A+ V V
Sbjct: 732  LNNMHEMFLKGEDLPHVASVVAV 754



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 41/150 (27%), Positives = 74/150 (49%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           + TYN LI  F +GG +KE   +   M E  V+ N  +  G+I A  +GG  EDA K  +
Sbjct: 388 VGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILL 447

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            M++    P       V+  Y  A   +E+   F  + E+G +P+V  Y  ++ ++A+  
Sbjct: 448 HMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGG 507

Query: 366 RWDEADELLNEMYTNRVSNIHQVIGQMIKG 455
            + E++ ++ +M  + V+        +I+G
Sbjct: 508 LYKESEAIMWKMGESGVARDRDSFNGVIEG 537



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 46/194 (23%), Positives = 93/194 (47%), Gaps = 4/194 (2%)
 Frame = +3

Query: 93  LGVQRNRDSLNG---VIEAYRQGGQFEDAIKAYVDMEK-VRCDPDEYTLEAVLSVYCFAG 260
           L + +N+ SLN    V + + Q G ++ +++ +  M++ + C P+E+    ++S+    G
Sbjct: 97  LEIFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREG 156

Query: 261 LVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWDEADELLNEMYTNRVSNIHQVIG 440
           L+++S E F+++   G+  SV  Y  ++  Y +  +++ + ELL  M   +V+       
Sbjct: 157 LLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYN 216

Query: 441 QMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNTILEALWCLGQKERAARVLDEATK 620
            +I        NW+ +   F ++  EG    I  +NT+L A    G  + A  V     +
Sbjct: 217 TVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNE 276

Query: 621 RGMYPELYRKNKLI 662
            GM P++     L+
Sbjct: 277 GGMVPDITTYRNLV 290



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           ++ +Y ALI+S+ + G Y+ +  +L RM +  V  +  + N VI +  +GG  +E  +  
Sbjct: 176 SVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSL 235

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +L+     GL DE+E  F+ + E G+ P +  Y  ++  + K
Sbjct: 236 FAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGK 295

Query: 360 TERWDEADELLNEM 401
             + ++  ELL EM
Sbjct: 296 LNKLEKVSELLKEM 309



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 2/212 (0%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I TYN L+++ A  GL  E E +   M E G+  +  +   ++E + +  + E   +   
Sbjct: 248 IITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLK 307

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +ME     PD  +   +L  Y   G +  +   F+Q++E    P+ + Y M+L +Y    
Sbjct: 308 EMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHG 367

Query: 366 RWDEADELLNEMYTNRVSNIHQVIG--QMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIR 539
           R+D+  EL  EM   +VSN    +G   ++   F +   ++ V   F  +  E     + 
Sbjct: 368 RYDDVRELFLEM---KVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMG 424

Query: 540 FFNTILEALWCLGQKERAARVLDEATKRGMYP 635
            +  ++ A    G  E A ++L    ++G+ P
Sbjct: 425 TYEGLIYACGKGGLHEDAKKILLHMDEKGIVP 456



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 4/223 (1%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I TY  L+ +F K    ++   +L  M   G   +  S N ++EAY   G    A+  + 
Sbjct: 283 ITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFR 342

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            M++ RC P+  T   +L++Y   G  D+  E F ++K    +P V  Y +++ V+ +  
Sbjct: 343 QMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGG 402

Query: 366 RWDEADELLNEMYTNRV----SNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFG 533
            + E   L ++M    V         +I    KG   + +   ++      ++ +G    
Sbjct: 403 YFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLH-----MDEKGIVPS 457

Query: 534 IRFFNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLI 662
            + +  ++EA       E A  + +   + G  P +   N LI
Sbjct: 458 TKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLI 500


>ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  411 bits (1057), Expect = e-112
 Identities = 193/268 (72%), Positives = 231/268 (86%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            TI+TYN+LIH+FA+GGLYKE EAILSRM E G+ RN  S +G+IE YRQ GQ+E+AIKA+
Sbjct: 498  TIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAF 557

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEK+RC+ DE TLE VL VYCFAGLVDES+EQF +IK  GI PSV+CYCMMLAVYAK 
Sbjct: 558  VEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKN 617

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
             RWD+A ELL+EM   RVS+IHQVIGQMIKGD+DD SNWQMVEY FDKLN+EGCGFG+RF
Sbjct: 618  GRWDDASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRF 677

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +NT+LEALW LGQK RAARVL EATKRG++PEL+R++KL+WSVDVHRMW GGA TA+S+W
Sbjct: 678  YNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRQSKLVWSVDVHRMWEGGAYTAVSLW 737

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            +N M E++ +GE+LPQLA  VV RG +E
Sbjct: 738  VNKMNEMLMDGEDLPQLAAVVVGRGSLE 765



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
 Frame = +3

Query: 6    IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
            +ETY  L+ +  KGGL+++ + IL  M   G+  +  + +G+IEAY Q   +++A+ A+ 
Sbjct: 429  METYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFN 488

Query: 186  DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
             M +V       T  +++  +   GL  E E    +++E GI  +   +  ++  Y ++ 
Sbjct: 489  TMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSG 548

Query: 366  RWDEADELLNEMYTNRV----SNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFG 533
            +++EA +   EM   R       +  V+G        D S  Q +E     + + G    
Sbjct: 549  QYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIE-----IKASGILPS 603

Query: 534  IRFFNTILEALWCLGQKERAARVLDEATK 620
            +  +  +L      G+ + A+ +LDE  K
Sbjct: 604  VLCYCMMLAVYAKNGRWDDASELLDEMIK 632



 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 8/191 (4%)
 Frame = +3

Query: 93  LGVQRNRDSLNG---VIEAYRQGGQFEDAIKAYVDMEK-VRCDPDEYTLEAVLSVYCFAG 260
           L + +NR SLN    V + +   G ++ +++ +  M++ + C P+E+    ++S+    G
Sbjct: 103 LDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREG 162

Query: 261 LVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWDEADELLNEMYTNRVS----NIH 428
           L+++  E F ++   G+  SV  Y  ++  Y +  +++ + ELL  M   RVS      +
Sbjct: 163 LLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYN 222

Query: 429 QVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNTILEALWCLGQKERAARVLD 608
            VI    +GD D    W+ +   F ++  EG    +  +NT+L A    G  + A  V  
Sbjct: 223 TVINACARGDLD----WEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFK 278

Query: 609 EATKRGMYPEL 641
              + G+ PE+
Sbjct: 279 TMIEGGIVPEI 289



 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 45/210 (21%), Positives = 88/210 (41%)
 Frame = +3

Query: 12   TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
            TYN LI  F +GG +KE   +   + +  +  N ++  G++ A  +GG  EDA K    M
Sbjct: 396  TYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHM 455

Query: 192  EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
                  P       ++  Y  A L DE+   F  + E+G + ++  Y  ++  +A+   +
Sbjct: 456  NGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLY 515

Query: 372  DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
             E + +L+ M    +S   +    +I+G +  +  ++    AF ++    C    +    
Sbjct: 516  KEFEAILSRMREYGISRNAKSFSGIIEG-YRQSGQYEEAIKAFVEMEKMRCELDEQTLEG 574

Query: 552  ILEALWCLGQKERAARVLDEATKRGMYPEL 641
            +L      G  + +     E    G+ P +
Sbjct: 575  VLGVYCFAGLVDESKEQFIEIKASGILPSV 604



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 4/207 (1%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TY+ L++ + K G Y +   +  +M E   + +  + N +I  + +GG F++ +  + D+
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
                DP+  T E ++      GL +++++    +   GI PS   Y  ++  Y +   +
Sbjct: 421 VDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALY 480

Query: 372 DEADELLNEM----YTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIR 539
           DEA    N M      + +   + +I    +G       ++  E    ++   G     +
Sbjct: 481 DEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGL-----YKEFEAILSRMREYGISRNAK 535

Query: 540 FFNTILEALWCLGQKERAARVLDEATK 620
            F+ I+E     GQ E A +   E  K
Sbjct: 536 SFSGIIEGYRQSGQYEEAIKAFVEMEK 562



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 47/208 (22%), Positives = 90/208 (43%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TYN L+ + A  GL  E E +   M E G+     + + ++E + + G+ E       +M
Sbjct: 256 TYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEM 315

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
           E     PD  +   ++  +   G + E+ + F+Q++  G  P+   Y ++L +Y K  R+
Sbjct: 316 ESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRY 375

Query: 372 DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
           D+  EL  +M  +           +I+  F +   ++ V   F  L  E     +  +  
Sbjct: 376 DDVRELFLQMKESSAEPDATTYNILIR-VFGEGGYFKEVVTLFHDLVDENIDPNMETYEG 434

Query: 552 ILEALWCLGQKERAARVLDEATKRGMYP 635
           ++ A    G  E A ++L     +G+ P
Sbjct: 435 LVFACGKGGLHEDAKKILFHMNGKGIVP 462



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 34/137 (24%), Positives = 67/137 (48%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I TY+ ++ +F K G  ++   +L  M   G   +  S N +IEA+ + G  ++A+  + 
Sbjct: 289 ITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFK 348

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            M+   C P+  T   +L++Y   G  D+  E F Q+KE   +P    Y +++ V+ +  
Sbjct: 349 QMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGG 408

Query: 366 RWDEADELLNEMYTNRV 416
            + E   L +++    +
Sbjct: 409 YFKEVVTLFHDLVDENI 425



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           ++ +Y ALI+++ + G Y+ +  +L RM    V  N  + N VI A  +G   +E  +  
Sbjct: 182 SVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGL 241

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +LS     GL DE+E  F+ + E GI P +  Y  ++  + K
Sbjct: 242 FAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGK 301

Query: 360 TERWDEADELLNEM 401
             + ++   LL EM
Sbjct: 302 LGKLEKVAMLLKEM 315


>ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  411 bits (1057), Expect = e-112
 Identities = 193/268 (72%), Positives = 231/268 (86%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            TI+TYN+LIH+FA+GGLYKE EAILSRM E G+ RN  S +G+IE YRQ GQ+E+AIKA+
Sbjct: 498  TIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAF 557

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEK+RC+ DE TLE VL VYCFAGLVDES+EQF +IK  GI PSV+CYCMMLAVYAK 
Sbjct: 558  VEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKN 617

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
             RWD+A ELL+EM   RVS+IHQVIGQMIKGD+DD SNWQMVEY FDKLN+EGCGFG+RF
Sbjct: 618  GRWDDASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRF 677

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +NT+LEALW LGQK RAARVL EATKRG++PEL+R++KL+WSVDVHRMW GGA TA+S+W
Sbjct: 678  YNTLLEALWWLGQKGRAARVLTEATKRGLFPELFRQSKLVWSVDVHRMWEGGAYTAVSLW 737

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            +N M E++ +GE+LPQLA  VV RG +E
Sbjct: 738  VNKMNEMLMDGEDLPQLAAVVVGRGSLE 765



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
 Frame = +3

Query: 6    IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
            +ETY  L+ +  KGGL+++ + IL  M   G+  +  + +G+IEAY Q   +++A+ A+ 
Sbjct: 429  METYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFN 488

Query: 186  DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
             M +V       T  +++  +   GL  E E    +++E GI  +   +  ++  Y ++ 
Sbjct: 489  TMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSG 548

Query: 366  RWDEADELLNEMYTNRV----SNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFG 533
            +++EA +   EM   R       +  V+G        D S  Q +E     + + G    
Sbjct: 549  QYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIE-----IKASGILPS 603

Query: 534  IRFFNTILEALWCLGQKERAARVLDEATK 620
            +  +  +L      G+ + A+ +LDE  K
Sbjct: 604  VLCYCMMLAVYAKNGRWDDASELLDEMIK 632



 Score = 67.4 bits (163), Expect = 6e-09
 Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 8/191 (4%)
 Frame = +3

Query: 93  LGVQRNRDSLNG---VIEAYRQGGQFEDAIKAYVDMEK-VRCDPDEYTLEAVLSVYCFAG 260
           L + +NR SLN    V + +   G ++ +++ +  M++ + C P+E+    ++S+    G
Sbjct: 103 LDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREG 162

Query: 261 LVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWDEADELLNEMYTNRVS----NIH 428
           L+++  E F ++   G+  SV  Y  ++  Y +  +++ + ELL  M   RVS      +
Sbjct: 163 LLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYN 222

Query: 429 QVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNTILEALWCLGQKERAARVLD 608
            VI    +GD D    W+ +   F ++  EG    +  +NT+L A    G  + A  V  
Sbjct: 223 TVINACARGDLD----WEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFK 278

Query: 609 EATKRGMYPEL 641
              + G+ PE+
Sbjct: 279 TMIEGGIVPEI 289



 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 45/210 (21%), Positives = 88/210 (41%)
 Frame = +3

Query: 12   TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
            TYN LI  F +GG +KE   +   + +  +  N ++  G++ A  +GG  EDA K    M
Sbjct: 396  TYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHM 455

Query: 192  EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
                  P       ++  Y  A L DE+   F  + E+G + ++  Y  ++  +A+   +
Sbjct: 456  NGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLY 515

Query: 372  DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
             E + +L+ M    +S   +    +I+G +  +  ++    AF ++    C    +    
Sbjct: 516  KEFEAILSRMREYGISRNAKSFSGIIEG-YRQSGQYEEAIKAFVEMEKMRCELDEQTLEG 574

Query: 552  ILEALWCLGQKERAARVLDEATKRGMYPEL 641
            +L      G  + +     E    G+ P +
Sbjct: 575  VLGVYCFAGLVDESKEQFIEIKASGILPSV 604



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 4/207 (1%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TY+ L++ + K G Y +   +  +M E   + +  + N +I  + +GG F++ +  + D+
Sbjct: 361 TYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDL 420

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
                DP+  T E ++      GL +++++    +   GI PS   Y  ++  Y +   +
Sbjct: 421 VDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALY 480

Query: 372 DEADELLNEM----YTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIR 539
           DEA    N M      + +   + +I    +G       ++  E    ++   G     +
Sbjct: 481 DEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGL-----YKEFEAILSRMREYGISRNAK 535

Query: 540 FFNTILEALWCLGQKERAARVLDEATK 620
            F+ I+E     GQ E A +   E  K
Sbjct: 536 SFSGIIEGYRQSGQYEEAIKAFVEMEK 562



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 47/208 (22%), Positives = 90/208 (43%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TYN L+ + A  GL  E E +   M E G+     + + ++E + + G+ E       +M
Sbjct: 256 TYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEM 315

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
           E     PD  +   ++  +   G + E+ + F+Q++  G  P+   Y ++L +Y K  R+
Sbjct: 316 ESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRY 375

Query: 372 DEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNT 551
           D+  EL  +M  +           +I+  F +   ++ V   F  L  E     +  +  
Sbjct: 376 DDVRELFLQMKESSAEPDATTYNILIR-VFGEGGYFKEVVTLFHDLVDENIDPNMETYEG 434

Query: 552 ILEALWCLGQKERAARVLDEATKRGMYP 635
           ++ A    G  E A ++L     +G+ P
Sbjct: 435 LVFACGKGGLHEDAKKILFHMNGKGIVP 462



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 34/137 (24%), Positives = 67/137 (48%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I TY+ ++ +F K G  ++   +L  M   G   +  S N +IEA+ + G  ++A+  + 
Sbjct: 289 ITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFK 348

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            M+   C P+  T   +L++Y   G  D+  E F Q+KE   +P    Y +++ V+ +  
Sbjct: 349 QMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGG 408

Query: 366 RWDEADELLNEMYTNRV 416
            + E   L +++    +
Sbjct: 409 YFKEVVTLFHDLVDENI 425



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           ++ +Y ALI+++ + G Y+ +  +L RM    V  N  + N VI A  +G   +E  +  
Sbjct: 182 SVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGL 241

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +LS     GL DE+E  F+ + E GI P +  Y  ++  + K
Sbjct: 242 FAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGK 301

Query: 360 TERWDEADELLNEM 401
             + ++   LL EM
Sbjct: 302 LGKLEKVAMLLKEM 315


>ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 857

 Score =  408 bits (1048), Expect = e-111
 Identities = 190/268 (70%), Positives = 234/268 (87%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            T+ETYN+LIH+FA+GGLYKE EAILSRM E G++R+  S NGVIEA+RQGGQ+E+A+K+Y
Sbjct: 484  TVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSY 543

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEK  C+P+E TLEAVLS+YC AGLVDE EEQFQ+IK  GI PSVMCYCMMLA+YAK 
Sbjct: 544  VEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKN 603

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
            +R ++A  L++ M T RVS+IHQVIGQMIKGDFDD SNWQ+VEY FDKLNSEGCG G+RF
Sbjct: 604  DRLNDAYNLIDAMITMRVSDIHQVIGQMIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRF 663

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +N +LEALWC+ Q+ERAARVL+EA+KRG++PEL+RK+KL+WSVDVHRM  GGA TA+SVW
Sbjct: 664  YNALLEALWCMFQRERAARVLNEASKRGLFPELFRKSKLVWSVDVHRMSEGGALTALSVW 723

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            LNN+ E+   G++LP++AT VVVRGHME
Sbjct: 724  LNNVHEMSMTGDDLPEVATVVVVRGHME 751



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 40/130 (30%), Positives = 65/130 (50%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TYN LI  F +GG +KE   +   M E  V+ N  +  G+I A  +GG +EDA K  + M
Sbjct: 382 TYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHM 441

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
            +    P       V+  +  A L +E+   F  + E+G  P+V  Y  ++  +A+   +
Sbjct: 442 NEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLY 501

Query: 372 DEADELLNEM 401
            EA+ +L+ M
Sbjct: 502 KEAEAILSRM 511



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 1/214 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           T+ +Y A+I+++ + G +  +  +L+ M +  V  +  + N VI A  +GG  +E  +  
Sbjct: 168 TVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGL 227

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +L      GL DE+E  F+ + E GI P +  Y  ++  + K
Sbjct: 228 FAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGK 287

Query: 360 TERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIR 539
             R ++  ELL EM                 G+  D +++ ++  A+ +L S     G+ 
Sbjct: 288 LNRLEKVSELLREMECG--------------GNLPDITSYNVLLEAYAELGSIKEAMGV- 332

Query: 540 FFNTILEALWCLGQKERAARVLDEATKRGMYPEL 641
            F   ++A  C+      + +L+   K G Y ++
Sbjct: 333 -FRQ-MQAAGCVANAATYSVLLNLYGKHGRYDDV 364



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 44/219 (20%), Positives = 99/219 (45%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I +YN L+ ++A+ G  KE   +  +M   G   N  + + ++  Y + G+++D    ++
Sbjct: 310 ITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFL 369

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +M+    DPD  T   ++ V+   G   E    F  + E  ++P++  Y  ++    K  
Sbjct: 370 EMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGG 429

Query: 366 RWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
            +++A ++L  M    V    +    +I+  F   + ++     F+ +N  G    +  +
Sbjct: 430 LYEDAKKILLHMNEKGVVPSSKAYTGVIEA-FGQAALYEEALVMFNTMNEVGSNPTVETY 488

Query: 546 NTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLI 662
           N+++ A    G  + A  +L    + G+  +++  N +I
Sbjct: 489 NSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVI 527



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 46/194 (23%), Positives = 93/194 (47%), Gaps = 8/194 (4%)
 Frame = +3

Query: 105 RNRDSLNG---VIEAYRQGGQFEDAIKAYVDMEK-VRCDPDEYTLEAVLSVYCFAGLVDE 272
           +N+ SLN    V + + Q G ++ +++ +  M++ + C P+E+    ++++    GL+D+
Sbjct: 93  KNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDK 152

Query: 273 SEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWDEADELLNEMYTNRVS----NIHQVIG 440
             E F ++   G+  +V  Y  ++  Y +  ++  + ELLN M   RVS      + VI 
Sbjct: 153 CREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVIN 212

Query: 441 QMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNTILEALWCLGQKERAARVLDEATK 620
              +G  D    W+ +   F ++  EG    +  +NT+L A    G  + A  V     +
Sbjct: 213 ACARGGLD----WEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNE 268

Query: 621 RGMYPELYRKNKLI 662
            G+ P++   + L+
Sbjct: 269 SGIVPDINTYSYLV 282



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 2/210 (0%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TYN L+ + A  GL  E E +   M E G+  + ++ + +++ + +  + E   +   +M
Sbjct: 242 TYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREM 301

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
           E     PD  +   +L  Y   G + E+   F+Q++  G   +   Y ++L +Y K  R+
Sbjct: 302 ECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRY 361

Query: 372 DEADELLNEMYTNRVSNIHQVIG--QMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
           D+  +L  EM   +VSN     G   ++   F +   ++ V   F  +  E     ++ +
Sbjct: 362 DDVRDLFLEM---KVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTY 418

Query: 546 NTILEALWCLGQKERAARVLDEATKRGMYP 635
             ++ A    G  E A ++L    ++G+ P
Sbjct: 419 EGLIFACGKGGLYEDAKKILLHMNEKGVVP 448


>ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
            lyrata] gi|297334836|gb|EFH65254.1| hypothetical protein
            ARALYDRAFT_476621 [Arabidopsis lyrata subsp. lyrata]
          Length = 863

 Score =  406 bits (1044), Expect = e-111
 Identities = 191/268 (71%), Positives = 230/268 (85%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            +IETY++L++SFA+GGL KE+EAILSR+ + G+ RNRD+ N  IEAY+QGG+FE+A+K Y
Sbjct: 491  SIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 550

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            VDMEK RCDPDE TLEAVLSVY FA LVDE  EQF+++K   I PS+MCYCMMLAVY KT
Sbjct: 551  VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 610

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
            ERWD+ +ELL EM +NRVSNIHQVIGQMIKGD+DD SNWQ+VEY  DKLNSEGCG GIRF
Sbjct: 611  ERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRF 670

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +N +L+ALW LGQKERAARVL+EATKRG++PEL+RKNKL+WSVDVHRM  GG  TA+SVW
Sbjct: 671  YNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVW 730

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            LN+M +++ NGE+LPQLA  V VRG +E
Sbjct: 731  LNDMNDMLLNGEDLPQLAVVVSVRGQLE 758



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 52/228 (22%), Positives = 106/228 (46%), Gaps = 18/228 (7%)
 Frame = +3

Query: 33  SFAKGGLYKETEAILSRMGEL----------GVQRNRDSLNG---VIEAYRQGGQFEDAI 173
           S  KG    + E++++++  L           + +N+ SLN    V + +   G ++ ++
Sbjct: 66  SVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSL 125

Query: 174 KAYVDMEK-VRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAV 350
           + +  M++ + C P+E+    ++S+    GL+D+  E F ++   G+  SV  Y  ++  
Sbjct: 126 RLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINA 185

Query: 351 YAKTERWDEADELLNEMYTNRVS----NIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSE 518
           Y +  R++ + ELL+ M  +++S      + VI    +G  D    W+ +   F ++  E
Sbjct: 186 YGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLD----WEGLLGLFAEMRHE 241

Query: 519 GCGFGIRFFNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLI 662
           G    I  +NT+L A    G  + A  V       G+ P+L   + L+
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 43/208 (20%), Positives = 94/208 (45%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I +YN L+ ++AK G  KE   +  +M   G   N ++ + ++  + Q G+++D  + ++
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +M+    DPD  T   ++ V+   G   E    F  + E  I+P +  Y  ++    K  
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436

Query: 366 RWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
             ++A ++L  M  N +    +    +I+  F   + ++    AF+ ++  G    I  +
Sbjct: 437 LHEDARKILQYMTANDIVPSSKAYTGVIEA-FGQAALYEEALVAFNTMHEVGSNPSIETY 495

Query: 546 NTILEALWCLGQKERAARVLDEATKRGM 629
           +++L +    G  + +  +L      G+
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGI 523



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           ++ +Y ALI+++ + G Y+ +  +L RM    +  +  + N VI A  +GG  +E  +  
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGL 234

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +LS     GL DE+E  F+ + + GI P +  Y  ++  + K
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294

Query: 360 TERWDEADELLNEM 401
             R ++  +LL+EM
Sbjct: 295 LRRLEKVSDLLSEM 308



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 31/137 (22%), Positives = 66/137 (48%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           + TY+ L+ +F K    ++   +LS M   G   +  S N ++EAY + G  ++A+  + 
Sbjct: 282 LTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            M+   C P+  T   +L+++  +G  D+  + F ++K     P    Y +++ V+ +  
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGG 401

Query: 366 RWDEADELLNEMYTNRV 416
            + E   L ++M    +
Sbjct: 402 YFKEVVTLFHDMVEENI 418


>ref|XP_006579551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 858

 Score =  403 bits (1036), Expect = e-110
 Identities = 190/269 (70%), Positives = 234/269 (86%), Gaps = 1/269 (0%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            T+ETYN+LIH+FA+GGLYKE EAILSRM E G++R+  S NGVIEA+RQGGQ+E+A+K+Y
Sbjct: 484  TVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSY 543

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            V+MEK  C+P+E TLEAVLS+YC AGLVDE EEQFQ+IK  GI PSVMCYCMMLA+YAK 
Sbjct: 544  VEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKN 603

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
            +R ++A  L++ M T RVS+IHQVIGQMIKGDFDD SNWQ+VEY FDKLNSEGCG G+RF
Sbjct: 604  DRLNDAYNLIDAMITMRVSDIHQVIGQMIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRF 663

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +N +LEALWC+ Q+ERAARVL+EA+KRG++PEL+RK+KL+WSVDVHRM  GGA TA+SVW
Sbjct: 664  YNALLEALWCMFQRERAARVLNEASKRGLFPELFRKSKLVWSVDVHRMSEGGALTALSVW 723

Query: 723  LNNMQELVTNGEELPQLATTVVV-RGHME 806
            LNN+ E+   G++LP++AT VVV RGHME
Sbjct: 724  LNNVHEMSMTGDDLPEVATVVVVSRGHME 752



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 40/130 (30%), Positives = 65/130 (50%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TYN LI  F +GG +KE   +   M E  V+ N  +  G+I A  +GG +EDA K  + M
Sbjct: 382 TYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHM 441

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
            +    P       V+  +  A L +E+   F  + E+G  P+V  Y  ++  +A+   +
Sbjct: 442 NEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLY 501

Query: 372 DEADELLNEM 401
            EA+ +L+ M
Sbjct: 502 KEAEAILSRM 511



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 1/214 (0%)
 Frame = +3

Query: 3   TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGG-QFEDAIKA 179
           T+ +Y A+I+++ + G +  +  +L+ M +  V  +  + N VI A  +GG  +E  +  
Sbjct: 168 TVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGL 227

Query: 180 YVDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAK 359
           + +M      PD  T   +L      GL DE+E  F+ + E GI P +  Y  ++  + K
Sbjct: 228 FAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGK 287

Query: 360 TERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIR 539
             R ++  ELL EM                 G+  D +++ ++  A+ +L S     G+ 
Sbjct: 288 LNRLEKVSELLREMECG--------------GNLPDITSYNVLLEAYAELGSIKEAMGV- 332

Query: 540 FFNTILEALWCLGQKERAARVLDEATKRGMYPEL 641
            F   ++A  C+      + +L+   K G Y ++
Sbjct: 333 -FRQ-MQAAGCVANAATYSVLLNLYGKHGRYDDV 364



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 44/219 (20%), Positives = 99/219 (45%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I +YN L+ ++A+ G  KE   +  +M   G   N  + + ++  Y + G+++D    ++
Sbjct: 310 ITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFL 369

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +M+    DPD  T   ++ V+   G   E    F  + E  ++P++  Y  ++    K  
Sbjct: 370 EMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGG 429

Query: 366 RWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
            +++A ++L  M    V    +    +I+  F   + ++     F+ +N  G    +  +
Sbjct: 430 LYEDAKKILLHMNEKGVVPSSKAYTGVIEA-FGQAALYEEALVMFNTMNEVGSNPTVETY 488

Query: 546 NTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLI 662
           N+++ A    G  + A  +L    + G+  +++  N +I
Sbjct: 489 NSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVI 527



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 46/194 (23%), Positives = 93/194 (47%), Gaps = 8/194 (4%)
 Frame = +3

Query: 105 RNRDSLNG---VIEAYRQGGQFEDAIKAYVDMEK-VRCDPDEYTLEAVLSVYCFAGLVDE 272
           +N+ SLN    V + + Q G ++ +++ +  M++ + C P+E+    ++++    GL+D+
Sbjct: 93  KNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDK 152

Query: 273 SEEQFQQIKELGIQPSVMCYCMMLAVYAKTERWDEADELLNEMYTNRVS----NIHQVIG 440
             E F ++   G+  +V  Y  ++  Y +  ++  + ELLN M   RVS      + VI 
Sbjct: 153 CREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVIN 212

Query: 441 QMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFFNTILEALWCLGQKERAARVLDEATK 620
              +G  D    W+ +   F ++  EG    +  +NT+L A    G  + A  V     +
Sbjct: 213 ACARGGLD----WEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNE 268

Query: 621 RGMYPELYRKNKLI 662
            G+ P++   + L+
Sbjct: 269 SGIVPDINTYSYLV 282



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 2/210 (0%)
 Frame = +3

Query: 12  TYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYVDM 191
           TYN L+ + A  GL  E E +   M E G+  + ++ + +++ + +  + E   +   +M
Sbjct: 242 TYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREM 301

Query: 192 EKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTERW 371
           E     PD  +   +L  Y   G + E+   F+Q++  G   +   Y ++L +Y K  R+
Sbjct: 302 ECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRY 361

Query: 372 DEADELLNEMYTNRVSNIHQVIG--QMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
           D+  +L  EM   +VSN     G   ++   F +   ++ V   F  +  E     ++ +
Sbjct: 362 DDVRDLFLEM---KVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTY 418

Query: 546 NTILEALWCLGQKERAARVLDEATKRGMYP 635
             ++ A    G  E A ++L    ++G+ P
Sbjct: 419 EGLIFACGKGGLYEDAKKILLHMNEKGVVP 448


>ref|XP_006300609.1| hypothetical protein CARUB_v10019779mg [Capsella rubella]
            gi|482569319|gb|EOA33507.1| hypothetical protein
            CARUB_v10019779mg [Capsella rubella]
          Length = 865

 Score =  403 bits (1036), Expect = e-110
 Identities = 190/268 (70%), Positives = 228/268 (85%)
 Frame = +3

Query: 3    TIETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAY 182
            +IETY++L++SFA+GGL KE+EAILSR+ + G+ RNRD+ N  IEAY+QGG+FE+A+K Y
Sbjct: 491  SIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGRFEEAVKTY 550

Query: 183  VDMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKT 362
            VDMEK RCDPDE TLEAVLSVY FA LVDE  EQF+++K   I PS+MCYCMMLAVY KT
Sbjct: 551  VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 610

Query: 363  ERWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRF 542
            ERWD+ +ELL EM +NRVSNIHQVIGQMIKGD+DD SNWQ+VEY  DKLNSEGCG GIRF
Sbjct: 611  ERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRF 670

Query: 543  FNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLIWSVDVHRMWPGGACTAISVW 722
            +N +L+ALW LGQKERAARVL+EATKRG++PEL+RKNKL+WSVDVHRM  GG  TA+SVW
Sbjct: 671  YNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVW 730

Query: 723  LNNMQELVTNGEELPQLATTVVVRGHME 806
            LN+M ++   GE+LPQLA  V VRG +E
Sbjct: 731  LNDMNDMFLTGEDLPQLAVVVSVRGQLE 758



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 43/208 (20%), Positives = 95/208 (45%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           I +YN L+ ++AK G  KE+  +  +M   G   N ++ + ++  + Q G+++D  + ++
Sbjct: 317 ITSYNVLLEAYAKSGSIKESMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
           +M+    DPD  T   ++ V+   G   E    F  + E  I+P +  Y  ++    K  
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436

Query: 366 RWDEADELLNEMYTNRVSNIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSEGCGFGIRFF 545
             ++A ++L  M  N +    +    +I+  F   + ++    AF+ ++  G    I  +
Sbjct: 437 LQEDARKILQYMTANDIVPSSKAYTGVIEA-FGQAALYEEALVAFNTMHEVGSNPSIETY 495

Query: 546 NTILEALWCLGQKERAARVLDEATKRGM 629
           +++L +    G  + +  +L      G+
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGI 523



 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 51/228 (22%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
 Frame = +3

Query: 33  SFAKGGLYKETEAILSRMGEL----------GVQRNRDSLNG---VIEAYRQGGQFEDAI 173
           S  KG    + E++++++  L           + +N+ SLN    V + +     ++ ++
Sbjct: 66  SVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRSDWQRSL 125

Query: 174 KAYVDMEK-VRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAV 350
           + +  M++ + C P+E+    ++S+    GL+D+  E F ++   G+  SV  Y  ++  
Sbjct: 126 RLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPGQGVSRSVFSYTALINA 185

Query: 351 YAKTERWDEADELLNEMYTNRVS----NIHQVIGQMIKGDFDDTSNWQMVEYAFDKLNSE 518
           Y +  R++ + ELL+ M   ++S      + VI    +G  D    W+ +   F ++  E
Sbjct: 186 YGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD----WEGLLGLFAEMRHE 241

Query: 519 GCGFGIRFFNTILEALWCLGQKERAARVLDEATKRGMYPELYRKNKLI 662
           G    I  +NT+L A    G  + A  V       G+ P+L   + L+
Sbjct: 242 GIQSDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289



 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 31/137 (22%), Positives = 67/137 (48%)
 Frame = +3

Query: 6   IETYNALIHSFAKGGLYKETEAILSRMGELGVQRNRDSLNGVIEAYRQGGQFEDAIKAYV 185
           + TY+ L+ +F K G  ++   +LS M   G   +  S N ++EAY + G  ++++  + 
Sbjct: 282 LTTYSHLVETFGKLGRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKESMGVFH 341

Query: 186 DMEKVRCDPDEYTLEAVLSVYCFAGLVDESEEQFQQIKELGIQPSVMCYCMMLAVYAKTE 365
            M+   C P+  T   +L+++  +G  D+  + F ++K     P    Y +++ V+ +  
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGG 401

Query: 366 RWDEADELLNEMYTNRV 416
            + E   L ++M    +
Sbjct: 402 YFKEVVTLFHDMVEENI 418