BLASTX nr result

ID: Mentha22_contig00010359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00010359
         (442 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]    67   3e-09
gb|EXB35423.1| Retrovirus-related Pol polyprotein from transposo...    59   7e-07

>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
          Length = 961

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
 Frame = -1

Query: 376 QNKRNGRVPILRRKVLQNQKENVSIVARMDIGKEIAQCTLLS*RRKRKALDSYEELVEGS 197
           Q K+ G++ +L  +    + +  S++  +D G     C  L      K L+S ++L EG+
Sbjct: 196 QKKKQGKLDLLVMETCLVENDFSSLI--IDSGASNHVCISL------KMLESSKDLEEGA 247

Query: 196 FIMXXXXXXXXXXXXXXXXKLNFMD-RILILNNVYFIPSFRRNLISVSKLHEQLFSLSFD 20
           F+M                 L+F + + L+L+NVYFIP F+RNLISVSKLHEQ   +SFD
Sbjct: 248 FMMRVGSGARVSATTVGTVXLSFANNKYLLLHNVYFIPDFKRNLISVSKLHEQFIXVSFD 307

Query: 19  NNGIII 2
            + + I
Sbjct: 308 IDSVSI 313


>gb|EXB35423.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 443

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -1

Query: 235 KALDSYEELVEGSFIMXXXXXXXXXXXXXXXXKLNFMD-RILILNNVYFIPSFRRNLISV 59
           ++L SY EL +G +++                +L+F + + L+LNNVYFIP  RRNLIS+
Sbjct: 220 QSLSSYTELADGDYMIKVGNGARVTAKAVGEVRLHFRENKFLVLNNVYFIPDIRRNLISM 279

Query: 58  SKLHEQLFSLSFDNNGIII 2
           SKL EQ F + F N+ + I
Sbjct: 280 SKLFEQFFKVYFVNDFVHI 298


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