BLASTX nr result

ID: Mentha22_contig00010122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00010122
         (715 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus...    85   3e-14
gb|EPS64499.1| sigma factor, partial [Genlisea aurea]                  57   6e-06
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac...    57   6e-06

>gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus guttatus]
          Length = 589

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 72/221 (32%), Positives = 94/221 (42%), Gaps = 13/221 (5%)
 Frame = -3

Query: 707 AAKSRDTINFRTQCILXXXXXXXXXXXXV--LELEKLQLXXXXXXXXXXXXXT------- 555
           ++KSR++INFRTQC+L               LE EKLQL                     
Sbjct: 29  SSKSRESINFRTQCVLSTTSPPPTMAATTTLLEFEKLQLSPLETIPNSLPADRSWTTPRA 88

Query: 554 ----LELEKVPSLDTHWIPFVAERPLTYVGAVGPPSEIHLGPNMDETNLLTSEDTVITXX 387
               L+L+K+ SL     P  + + LTYVG+VGPPSEI+LG N+D+  L+TS++ VIT  
Sbjct: 89  KTSLLDLDKLTSL-----PVASNKTLTYVGSVGPPSEINLGANLDKEALITSDEAVITAA 143

Query: 386 XXXXXXXXXXXXXXXXXXSMMISLHXXXXXXXXXTGVLPEVDTHPVETIFREAKVGEIGL 207
                             +MM+SLH              EVDT     + REA++G    
Sbjct: 144 ASEALALAKAAVKVAKDAAMMVSLHRSTKPDTKS---FLEVDTSAERVVVREAEIGSGEN 200

Query: 206 SGKFLASDPVAEPDEVEPXXXXXXXXXXXXXXSIAVRSKRQ 84
               L        D  EP              SIAVRSKRQ
Sbjct: 201 DDHVLGE----SDDSEEPSAEELELLDLQLSSSIAVRSKRQ 237


>gb|EPS64499.1| sigma factor, partial [Genlisea aurea]
          Length = 431

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 2/159 (1%)
 Frame = -3

Query: 554 LELEKVPSLDTHWIPFVAERPLTYVGAVGPPSEIHLGPNMDETNLLTSEDTVITXXXXXX 375
           L+LEK+PSLD + +P  +++  TYVG +G PS++     +D+ +LLTSE+ +I       
Sbjct: 89  LDLEKIPSLDAYPVPLASDQTWTYVGGIGSPSQV-----LDKESLLTSEEAIIAAAASEA 143

Query: 374 XXXXXXXXXXXXXXSMMISLHXXXXXXXXXTGVLPEVDTHPVETIFREAKVGEIGL--SG 201
                         +++I+           TG LP V+   V       K G   L  SG
Sbjct: 144 LALAKAAVQVAKDAAVIINNRKSIKPNGAETGTLPIVEASSV------GKNGTTKLHWSG 197

Query: 200 KFLASDPVAEPDEVEPXXXXXXXXXXXXXXSIAVRSKRQ 84
           +   S    E D+VEP              +I VRSKRQ
Sbjct: 198 RD-CSSMHEESDDVEPAAEELEILEVQLSENITVRSKRQ 235


>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
           gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit
           2 [Theobroma cacao]
          Length = 623

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 37/104 (35%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
 Frame = -3

Query: 704 AKSRDTINFRTQCILXXXXXXXXXXXXV-LELEKLQLXXXXXXXXXXXXXTLELEKVPSL 528
           AK ++ I FRTQC+L              L++EKL+L                    PS 
Sbjct: 63  AKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRL--------------------PSF 102

Query: 527 DTHWIPFVAERPLTYVGAVGPPSEIHLGPNMDETNLLTSEDTVI 396
           + H      +RP TY+GA GPPSE  LG  +   NLLTS++ VI
Sbjct: 103 EAHPNSVAVDRPWTYIGATGPPSEASLGATLATDNLLTSDEAVI 146


Top