BLASTX nr result
ID: Mentha22_contig00009838
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00009838
(625 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU42543.1| hypothetical protein MIMGU_mgv1a000463mg [Mimulus... 237 2e-60
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 202 7e-50
gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlise... 198 1e-48
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 197 2e-48
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 194 2e-47
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] 182 5e-44
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 178 1e-42
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 176 5e-42
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici... 176 7e-42
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 175 9e-42
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 175 1e-41
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 174 2e-41
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 173 3e-41
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 173 3e-41
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 171 2e-40
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 170 3e-40
ref|XP_007155403.1| hypothetical protein PHAVU_003G198500g [Phas... 165 1e-38
ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis tha... 164 2e-38
ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago trunc... 164 3e-38
ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutr... 163 3e-38
>gb|EYU42543.1| hypothetical protein MIMGU_mgv1a000463mg [Mimulus guttatus]
Length = 1135
Score = 237 bits (604), Expect = 2e-60
Identities = 114/179 (63%), Positives = 143/179 (79%), Gaps = 4/179 (2%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPN-PDLPNSI-PSNAFDPDLIVDGYEPFVEDAESYKEEY 174
+S LGKLYRATV FI ++N N D N I P + FD DL++DGYE FVE A+ +KE Y
Sbjct: 953 ISKGVLGKLYRATVQFIDQSNDNHSDEKNKISPHDYFDQDLVIDGYESFVEIAKEHKEMY 1012
Query: 175 LERMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWF 354
L+RM +L YYGA SEVEILTGN +KS YLQ DNRR+GEV++R+LV+VKSLMKEVKGW
Sbjct: 1013 LDRMDSLLRYYGAASEVEILTGNFRKKSDYLQRDNRRYGEVRDRVLVAVKSLMKEVKGWL 1072
Query: 355 ESSCSS--DEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKSNKNKMMVE 525
S C +E+++K+A++WYYVTYHPSY DGS +CLGFPWAVGDVLM+IKS+KN+M++E
Sbjct: 1073 RSGCDEAVEEDQRKLAAAWYYVTYHPSYVDGSEHCLGFPWAVGDVLMDIKSDKNRMLIE 1131
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 202 bits (514), Expect = 7e-50
Identities = 98/171 (57%), Positives = 125/171 (73%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S LGKLYRA V+ +N + +A+D L+ DGYE F+E A+++KE YL+
Sbjct: 947 ISEGVLGKLYRAIVNSSVRSNSDDLGSVRAIQDAYDHALLFDGYEAFIETAKNHKETYLD 1006
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
RM +L +YYGAE EVEILTGNL +KS YLQ DNRR+ E+K+RILVS KSL KEVKGWF
Sbjct: 1007 RMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTG 1066
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKSNKNK 513
C DE K K+AS+WY+VTYHPSY +GS NCLGFPW VGD+L++IK + +
Sbjct: 1067 CCKEDEHK-KLASAWYHVTYHPSYCEGSANCLGFPWVVGDILLDIKLHNTR 1116
>gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlisea aurea]
Length = 1094
Score = 198 bits (503), Expect = 1e-48
Identities = 104/172 (60%), Positives = 121/172 (70%), Gaps = 3/172 (1%)
Frame = +1
Query: 4 SHSALGKLYRATVHFIQETNPNPDLPNSIPSNAF-DPDLIVDGYEPFVEDAESYKEEYLE 180
S LGKLYRA + FI + N N IPS F D DL+ DG+E F+E A S++E Y E
Sbjct: 927 STGPLGKLYRAALRFIGQRNS----ANEIPSRGFFDGDLVADGHEAFLETALSHRERYSE 982
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
RM L YYGAE E EILTGN+ KSSYL DNRR+GEVK+RILVSVKSLMKE K WF
Sbjct: 983 RMGQLLSYYGAEDEAEILTGNIESKSSYLSRDNRRYGEVKDRILVSVKSLMKEAKVWFGD 1042
Query: 361 SCSSDEE--KQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKSNKN 510
SS++E +K+AS+WY VTYHP Y G RNC GFPWAVG VLM+IK+ KN
Sbjct: 1043 GLSSEKEGDDRKLASAWYVVTYHPRYGVGRRNCSGFPWAVGSVLMDIKAAKN 1094
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 197 bits (501), Expect = 2e-48
Identities = 94/171 (54%), Positives = 124/171 (72%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S LGKLYR + N + + +A+D DL+V+GYE F+E A+++KE YL+
Sbjct: 946 ISEGVLGKLYRGVIKSYIRRNSDDLSTDRAIQDAYDHDLLVEGYEAFIETAKTHKEMYLD 1005
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
M +L +YYGAE EVEILTGNL +KS YLQ DNRR+ E+K+RILVS KSL KEVKGWF S
Sbjct: 1006 SMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWF-S 1064
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKSNKNK 513
C ++++ QK+ S+WY+VTYHPSY S NCLGFPW VGD+L+ IKS+ +
Sbjct: 1065 GCCTEDDHQKLVSAWYHVTYHPSYCHESANCLGFPWVVGDILLNIKSHNTR 1115
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum]
Length = 1119
Score = 194 bits (493), Expect = 2e-47
Identities = 94/174 (54%), Positives = 122/174 (70%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S LGKLYR + N + + +A+D DL+V+GYE F E A+++K YL+
Sbjct: 946 ISEGVLGKLYRGVMKSYIRRNSDDLSADRAIQDAYDHDLLVEGYEAFTETAKTHKAMYLD 1005
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
M +L +YYGAE EVEILTGNL +KS YLQ DNRR+ E+K+RILVS KSL KEVKGWF S
Sbjct: 1006 SMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLHKEVKGWFTS 1065
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKSNKNKMMV 522
C D+ QK+AS+WY+VTYHPSY S NCLGFPW VGD+L+ +KS+ + +
Sbjct: 1066 CCQEDDH-QKLASAWYHVTYHPSYCHESANCLGFPWVVGDILLNMKSHNTRKTI 1118
>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
Length = 1115
Score = 182 bits (463), Expect = 5e-44
Identities = 88/167 (52%), Positives = 121/167 (72%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
VS+ ALGKLYRATV + + N A+D DL V+G+E F+ AES+++ Y++
Sbjct: 942 VSNGALGKLYRATVESESQGSSNLVWSEKTAEAAYDRDLEVNGFEEFIALAESHRDMYID 1001
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
+M + +YY ESE E+LTGNL ++++YLQ DNRR+ EVK+RIL++VKSL +E KGWFE
Sbjct: 1002 KMNGIMNYYELESEDEVLTGNLRKRAAYLQRDNRRYFEVKDRILLAVKSLQREAKGWFEG 1061
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKS 501
SC + E+QK+AS+WY+VTYHP+Y S NCL FPW GD+L+ IKS
Sbjct: 1062 SCEA-MEQQKMASAWYHVTYHPNYYQKSINCLSFPWIKGDILLNIKS 1107
>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
gi|462407047|gb|EMJ12511.1| hypothetical protein
PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 178 bits (452), Expect = 1e-42
Identities = 86/170 (50%), Positives = 119/170 (70%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S+ ALGKLYRA V + + N I A+D DL VDG E +E A+ +++ Y+E
Sbjct: 945 ISNGALGKLYRAVVGSVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVAKGHRDMYIE 1004
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
+M+ + +YYGA +E EILTGNL +++YLQ DNRR+G++K+RI +S+K+L KE KG FES
Sbjct: 1005 KMRTMMNYYGAVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQKEAKGLFES 1064
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKSNKN 510
SC E Q++AS+WY+VTYHPSY NCL FPW VGD+L+ IK+ N
Sbjct: 1065 SCPVSEH-QRMASAWYHVTYHPSYFQQDMNCLSFPWIVGDILLNIKALNN 1113
>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
Length = 1122
Score = 176 bits (446), Expect = 5e-42
Identities = 86/172 (50%), Positives = 114/172 (66%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S+ LGKLYRA V + N L A+D L V+G+E F+E A S+KE Y +
Sbjct: 950 ISNGVLGKLYRALVESTTQVRSNIVLSEKFAEEAYDHQLEVNGFEAFLETASSHKEMYAQ 1009
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
+M +L +Y AE+E E+LTGNL ++SYLQ DNRR+G++K+RIL+SVK L +E K WFES
Sbjct: 1010 KMSSLMSFYDAETEDEMLTGNLQNRASYLQRDNRRYGDMKDRILISVKDLQREAKEWFES 1069
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKSNKNKM 516
C E Q +AS+WY+VTYHP YS S L FPW VGD+L+ IKS K+
Sbjct: 1070 DC-QPHEYQLMASAWYHVTYHPKYSHESSTFLSFPWIVGDILLHIKSVNTKV 1120
>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 983
Score = 176 bits (445), Expect = 7e-42
Identities = 87/171 (50%), Positives = 114/171 (66%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S LGKLYR T+ ++ +I +D DL V G+E FVE A S+K+ Y+E
Sbjct: 794 ISGGVLGKLYRGTLDSTRQQRSKFVWTENIAEATYDHDLEVKGFEEFVEIAISHKDMYVE 853
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
++ L YY A+ E EILTGNL K+ YLQ DNRR+G+ K+RIL+SVKSL KE K WFES
Sbjct: 854 KLSGLMDYYEAKKEDEILTGNLQNKAMYLQRDNRRYGDTKDRILISVKSLQKEAKEWFES 913
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKSNKNK 513
C + +EKQ++AS+WY+VTYHPSY CL FPW V D+L+ IKS +K
Sbjct: 914 CCQA-KEKQRLASAWYHVTYHPSYFQEGITCLSFPWIVADILLNIKSANSK 963
>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 175 bits (444), Expect = 9e-42
Identities = 87/172 (50%), Positives = 115/172 (66%)
Frame = +1
Query: 4 SHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLER 183
S LGKLYRAT++ + + A+D DL V+G+E + AE++KE Y ER
Sbjct: 945 SSGVLGKLYRATINSTVQIRSKFVWTKEMAELAYDHDLEVNGFESLISVAETHKEMYEER 1004
Query: 184 MKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESS 363
M L YY E E EILTGN+ K+ +L DNRR+GE+KERI++SVK L +E K WF+SS
Sbjct: 1005 MSLLMSYYDVEYEDEILTGNMYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSS 1064
Query: 364 CSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKSNKNKMM 519
CS +E QK+AS+WYYVTYHP+Y + N L FPW VGD+L+ IKS +NK +
Sbjct: 1065 CSKADEHQKLASAWYYVTYHPNYFEERMNSLSFPWIVGDILLRIKS-RNKFL 1115
>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 175 bits (443), Expect = 1e-41
Identities = 86/172 (50%), Positives = 114/172 (66%)
Frame = +1
Query: 4 SHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLER 183
S LGKLYRAT++ +T + +D DL V+G+E + AE++KE Y ER
Sbjct: 945 SSGVLGKLYRATINSTVQTRSKFVWTKEMAELVYDHDLEVNGFESLISVAETHKEMYEER 1004
Query: 184 MKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFESS 363
M L YY E E EILTGN+ K+ +L DNRR+GE+KERI++SVK L +E K WF+SS
Sbjct: 1005 MSLLMSYYDVEYEDEILTGNIYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSS 1064
Query: 364 CSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKSNKNKMM 519
CS +E QK+AS+WYYVTYHP+Y N L FPW VGD+L+ +KS +NK +
Sbjct: 1065 CSKADEHQKLASAWYYVTYHPNYFQERMNSLSFPWIVGDILLRVKS-RNKFL 1115
>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
Length = 1131
Score = 174 bits (441), Expect = 2e-41
Identities = 88/167 (52%), Positives = 112/167 (67%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S LGKLYRAT+ I + N I ++D DL VDG+E F+ AES+KE Y E
Sbjct: 960 ISFGVLGKLYRATLDSIMQIRSNAIWSEKIAEASYDHDLEVDGFEAFLGVAESHKEMYEE 1019
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
M AL +YYGA +E EILTGNL ++SYLQ DNRR+G++K+RIL+S K+L E K WF S
Sbjct: 1020 EMNALMNYYGASTEDEILTGNLRNRASYLQRDNRRYGDMKDRILLSAKNLQNEAKEWFGS 1079
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKS 501
SC +E Q +AS+WY+VTY PSY L FPW VGD+L+ IKS
Sbjct: 1080 SCKENEHPQ-LASAWYHVTYSPSYCKERMALLSFPWIVGDILLNIKS 1125
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 173 bits (439), Expect = 3e-41
Identities = 86/167 (51%), Positives = 112/167 (67%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S LGKLYR ++ N I +D DL V G+E F+ A YKE+Y+E
Sbjct: 939 ISDGVLGKLYRDIHDSTRQERSNFMWSKKIAEATYDQDLEVKGFEDFLGIASIYKEKYME 998
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
+M L YYGA++E EILTGNL + +YLQ DNR++G+VK+RILVS+K+L KE K WFES
Sbjct: 999 KMSTLMDYYGAKTEDEILTGNLRHRPTYLQRDNRKYGDVKDRILVSLKNLKKEAKEWFES 1058
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKS 501
SC+ E Q +AS+WY+VTYHP+Y NCL FPW VGD+L+ IKS
Sbjct: 1059 SCNPTEH-QCMASAWYHVTYHPTYFHERMNCLSFPWIVGDILLNIKS 1104
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 173 bits (439), Expect = 3e-41
Identities = 89/171 (52%), Positives = 117/171 (68%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S+ ALGKLYRAT+ + +IP A+D DL VDG+E F+E A+ +KE Y E
Sbjct: 944 ISNGALGKLYRATIASRVNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAE 1003
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
+M L ++YGAESE E+LTGNL K YLQ DNRRF E+K+RIL+SVKSL KE K W
Sbjct: 1004 KMATLMNFYGAESEDEMLTGNLRNKLMYLQRDNRRFTEMKDRILISVKSLQKEAKEWLYG 1063
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKSNKNK 513
SC + QK+AS+WY+VTYH ++S + N L FPW VG+VL+ IKS ++
Sbjct: 1064 SC-KPHQHQKMASAWYHVTYHSTFSSQTPNFLSFPWIVGEVLLVIKSANSR 1113
>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca subsp.
vesca]
Length = 1136
Score = 171 bits (432), Expect = 2e-40
Identities = 82/167 (49%), Positives = 119/167 (71%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S+ ALGKLYRA + + A+D +L V G+E F+E AES++++Y+E
Sbjct: 947 ISNGALGKLYRAIRSSVVQEQTIVVWSQQRAEEAYDRELEVQGFESFLEMAESHRDKYIE 1006
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
+M++L +YY A +E EILTGNL +++YLQ DNRR+ ++K+RIL+S+K+L KE KGWFES
Sbjct: 1007 KMRSLMNYYEATTEDEILTGNLRNRAAYLQRDNRRYFDLKDRILLSLKTLQKEAKGWFES 1066
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKS 501
SC E+ Q++AS+WY+VTY+ +Y NCL FPW VGD+L+ IKS
Sbjct: 1067 SCKVSEQ-QRLASAWYHVTYNLAYFQEDMNCLSFPWIVGDILLNIKS 1112
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus]
Length = 1117
Score = 170 bits (431), Expect = 3e-40
Identities = 86/171 (50%), Positives = 116/171 (67%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S + LGKLYRA V I++ +D DL VDG+E F+E AE+YKE Y+E
Sbjct: 944 ISSNVLGKLYRAAVKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIE 1003
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
+M L +YYGAE E EIL G+L ++SYLQ DNR++G++K+RIL+SVK+L KEVK WFE+
Sbjct: 1004 KMSILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFEN 1063
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKSNKNK 513
SC ++ +AS+WY+VTYHPSY FPWAV DVL+ IK+ +K
Sbjct: 1064 SC-DPLNRRMMASAWYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSK 1113
>ref|XP_007155403.1| hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris]
gi|561028757|gb|ESW27397.1| hypothetical protein
PHAVU_003G198500g [Phaseolus vulgaris]
Length = 1119
Score = 165 bits (417), Expect = 1e-38
Identities = 81/168 (48%), Positives = 116/168 (69%), Gaps = 1/168 (0%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S LGKLYRA + + + + A+D L V+G+E F+E A S+KE Y +
Sbjct: 946 ISKGVLGKLYRAIIESQMQIKYSFVWSEKLAEEAYDRSLEVNGFEAFLETASSHKEMYAQ 1005
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
+M +L ++YGAE+E E+L GNL ++SYLQ DNRR+G++K+RIL+SVK+L +E K WFE+
Sbjct: 1006 KMSSLMNFYGAETEDEMLLGNLQNRASYLQRDNRRYGDMKDRILLSVKNLQREAKEWFET 1065
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNC-LGFPWAVGDVLMEIKS 501
SC E + +AS+WY+VTYHPSY +C L FPW VG+VL++IKS
Sbjct: 1066 SC-QPHEYRPMASAWYHVTYHPSYYCQESSCFLSFPWIVGEVLLQIKS 1112
>ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis thaliana]
gi|75318859|sp|O82504.1|RDR2_ARATH RecName:
Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2;
AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1;
AltName: Full=RNA-directed RNA polymerase 2
gi|3600048|gb|AAC35535.1| similar to hypothetical
proteins in Schizosaccharomyces pombe (GB:Z98533) and C.
elegans (GB:Z48334 and Z78419) [Arabidopsis thaliana]
gi|4850292|emb|CAB43048.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|7267812|emb|CAB81214.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|332657576|gb|AEE82976.1| RNA-dependent RNA polymerase
2 [Arabidopsis thaliana]
Length = 1133
Score = 164 bits (415), Expect = 2e-38
Identities = 80/176 (45%), Positives = 117/176 (66%), Gaps = 1/176 (0%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S S GKLYRA + + P + +++ A+D L G+E F+E A+++++ Y E
Sbjct: 952 ISESVFGKLYRAVKSSLAQRKPEAESEDTV---AYDVTLEEAGFESFIETAKAHRDMYGE 1008
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
++ +L YYGA +E EILTG L K YL DNRR+G++K+RI +SVK L KE GWFE
Sbjct: 1009 KLTSLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEK 1068
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKS-NKNKMMVE 525
SC +++K+K+AS+WYYVTY+P++ D L FPW VGDVL++IK+ N + VE
Sbjct: 1069 SCEDEQQKKKLASAWYYVTYNPNHRDEKLTFLSFPWIVGDVLLDIKAENAQRQSVE 1124
>ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago truncatula]
gi|355509999|gb|AES91141.1| Rna-dependent RNA polymerase
[Medicago truncatula]
Length = 1308
Score = 164 bits (414), Expect = 3e-38
Identities = 81/167 (48%), Positives = 110/167 (65%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S LGKLYRAT+ + + + A+D L VDG+E F+E A S+++ Y +
Sbjct: 951 ISKGVLGKLYRATIDSNLQVRFDMVMSEKFAKEAYDHQLEVDGFEVFLETALSHRDMYAQ 1010
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
+M +L +YGA +E E+LTGNL ++SYLQ DNRR+G++K+RIL+SVK L E K WFES
Sbjct: 1011 KMISLMSFYGATTEDEMLTGNLQNRASYLQRDNRRYGDMKDRILISVKDLQLEAKEWFES 1070
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKS 501
C E Q +AS+WY+VTYHP Y S L FPW VGD+L+ IKS
Sbjct: 1071 DC-QPHEYQLMASAWYHVTYHPKYYIESSTFLSFPWIVGDILLHIKS 1116
Score = 67.4 bits (163), Expect = 3e-09
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = +1
Query: 298 KERILVSVK--SLMKEVKGWFESSCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWA 471
K+ +++++K L EVK WFES C E Q +AS+WY+V +HP Y S N + FPW
Sbjct: 1232 KKHMIINLKLMDLQLEVKEWFESDCQPHEH-QLMASAWYHVIHHPKYYHKSSNFVSFPWI 1290
Query: 472 VGDVLMEIK 498
VGD+L+ +K
Sbjct: 1291 VGDILLYVK 1299
>ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum]
gi|557097970|gb|ESQ38406.1| hypothetical protein
EUTSA_v10028370mg [Eutrema salsugineum]
Length = 1124
Score = 163 bits (413), Expect = 3e-38
Identities = 77/167 (46%), Positives = 112/167 (67%)
Frame = +1
Query: 1 VSHSALGKLYRATVHFIQETNPNPDLPNSIPSNAFDPDLIVDGYEPFVEDAESYKEEYLE 180
+S S GKLYRA + + P S + A+D L G+E F+E A+++++ Y E
Sbjct: 950 ISESVFGKLYRAVKRSLAQRKPEE--AESEVTMAYDSTLEEAGFESFIETAKAHRDMYAE 1007
Query: 181 RMKALFHYYGAESEVEILTGNLSRKSSYLQYDNRRFGEVKERILVSVKSLMKEVKGWFES 360
++ +L +YYGA +E EILTG L K YLQ DNRR+G++K+RI +SVK L +E GWF+
Sbjct: 1008 KLSSLMNYYGAANEEEILTGILRTKEMYLQRDNRRYGDMKDRITLSVKDLQREAMGWFDK 1067
Query: 361 SCSSDEEKQKVASSWYYVTYHPSYSDGSRNCLGFPWAVGDVLMEIKS 501
SC +++++K+AS+WYYVTY+PS+ D L FPW VGDVL+ IK+
Sbjct: 1068 SCKEEQQRKKLASAWYYVTYNPSHRDEKPKFLSFPWIVGDVLLGIKA 1114