BLASTX nr result

ID: Mentha22_contig00008375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00008375
         (314 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_002505433.1| fibrinogen-binding protein, partial [Staphyl...    59   9e-07
ref|WP_002494902.1| Gram-positive signal peptide protein, YSIRK ...    59   9e-07
ref|WP_002494305.1| Gram-positive signal peptide protein, YSIRK ...    59   9e-07
ref|WP_002505898.1| putative serine-aspartate repeat-containing ...    57   3e-06
ref|WP_002505240.1| hypothetical protein, partial [Staphylococcu...    57   3e-06
ref|WP_002494863.1| hypothetical protein, partial [Staphylococcu...    56   5e-06

>ref|WP_002505433.1| fibrinogen-binding protein, partial [Staphylococcus epidermidis]
           gi|394296422|gb|EJE40049.1| fibrinogen-binding protein,
           partial [Staphylococcus epidermidis NIH04003]
          Length = 974

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
 Frame = +3

Query: 12  APEDSELLDSEAKNLV----KTPSPDGVNEATNLEKTPSPDGPDGENEATHLEKTPSLDG 179
           AP   E   +EA N      + PS +  NEA + E+TPS +     NEA   E+TPS + 
Sbjct: 94  APSKEEAPSNEATNEAPSKEEAPSNEATNEAPSKEETPSNEAT---NEAPSKEETPSNEA 150

Query: 180 ENVVNNLEKMPSLDDGVNEAKNLERTPSPNRENEAKNSEKTPS 308
            N   + E+ PS ++  NEA + E  PS    NEA + E+TPS
Sbjct: 151 TNEAPSKEEAPS-NEATNEALSKEEAPSNEATNEAPSKEETPS 192



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
 Frame = +3

Query: 12  APEDSELLDSEAKNLV----KTPSPDGVNEATNLEKTPSPDGPDGENEATHLEKTPSLDG 179
           AP   E   +EA N      +TPS +  NEA + E+TPS +     NEA   E+ PS + 
Sbjct: 109 APSKEEAPSNEATNEAPSKEETPSNEATNEAPSKEETPSNEAT---NEAPSKEEAPSNEA 165

Query: 180 ENVVNNLEKMPSLDDGVNEAKNLERTPSPNRENEAKNSEKT 302
            N   + E+ PS ++  NEA + E TPS    NEA + EK+
Sbjct: 166 TNEALSKEEAPS-NEATNEAPSKEETPSNEATNEAPSKEKS 205



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/89 (38%), Positives = 49/89 (55%)
 Frame = +3

Query: 42  EAKNLVKTPSPDGVNEATNLEKTPSPDGPDGENEATHLEKTPSLDGENVVNNLEKMPSLD 221
           EA +  + PS +  NEA + E+ PS +     NEA   E+ PS +  N   + E+ PS +
Sbjct: 63  EAPSKEEAPSNEATNEALSKEEAPSNEAT---NEAPSKEEAPSNEATNEAPSKEEAPS-N 118

Query: 222 DGVNEAKNLERTPSPNRENEAKNSEKTPS 308
           +  NEA + E TPS    NEA + E+TPS
Sbjct: 119 EATNEAPSKEETPSNEATNEAPSKEETPS 147


>ref|WP_002494902.1| Gram-positive signal peptide protein, YSIRK family [Staphylococcus
           epidermidis] gi|394231267|gb|EJD76902.1| Gram-positive
           signal peptide protein, YSIRK family [Staphylococcus
           epidermidis NIHLM087]
          Length = 137

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = +3

Query: 81  VNEATNLEKTPSPDGPDGENEATHLEKTPSLDGENVVNNLEKMPSLDDGVNEAKNLERTP 260
           V EA++ E+TPS + P   NEA+  E+TPS +  N  ++ E+ PS ++  NEA + E TP
Sbjct: 61  VGEASSKEETPSDEAP---NEASSKEETPSNEAPNEASSKEETPS-NEAPNEASSKEETP 116

Query: 261 SPNRENEAKNSEKTPS 308
           S    NEA + E+TPS
Sbjct: 117 SNEAPNEASSKEETPS 132


>ref|WP_002494305.1| Gram-positive signal peptide protein, YSIRK family, partial
           [Staphylococcus epidermidis] gi|394231178|gb|EJD76823.1|
           Gram-positive signal peptide protein, YSIRK family,
           partial [Staphylococcus epidermidis NIHLM095]
          Length = 133

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = +3

Query: 81  VNEATNLEKTPSPDGPDGENEATHLEKTPSLDGENVVNNLEKMPSLDDGVNEAKNLERTP 260
           V EA++ E+TPS + P   NEA+  E+TPS +  N  ++ E+ PS ++  NEA + E TP
Sbjct: 61  VGEASSKEETPSDEAP---NEASSKEETPSNEAPNEASSKEETPS-NEAPNEASSKEETP 116

Query: 261 SPNRENEAKNSEKTPS 308
           S    NEA + E+TPS
Sbjct: 117 SNEAPNEASSKEETPS 132


>ref|WP_002505898.1| putative serine-aspartate repeat-containing protein E, partial
           [Staphylococcus epidermidis] gi|394302637|gb|EJE46076.1|
           putative serine-aspartate repeat-containing protein E,
           partial [Staphylococcus epidermidis NIH051475]
          Length = 931

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
 Frame = +3

Query: 12  APEDSELLDSEAKNLV----KTPSPDGVNEATNLEKTPSPDGPDGENEATHLEKTPSLDG 179
           AP   E  ++EA N      + PS +  NEA + E+ PS +     NEA   E+TPS + 
Sbjct: 94  APSKEEAPNNEATNEAPSKEEAPSNEATNEAPSKEEAPSNEAT---NEAPSKEETPSNEA 150

Query: 180 ENVVNNLEKMPSLDDGVNEAKNLERTPSPNRENEAKNSEKTPS 308
            N   + E+ PS ++  NEA + E  PS    NEA + E+TPS
Sbjct: 151 TNEAPSKEETPS-NEATNEAPSKEEVPSNEATNEALSKEETPS 192



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
 Frame = +3

Query: 12  APEDSELLDSEAKNLV----KTPSPDGVNEATNLEKTPSPDGPDGENEATHLEKTPSLDG 179
           AP   E   +EA N      + PS +  NEA + E+TPS +     NEA   E+TPS + 
Sbjct: 109 APSKEEAPSNEATNEAPSKEEAPSNEATNEAPSKEETPSNEAT---NEAPSKEETPSNEA 165

Query: 180 ENVVNNLEKMPSLDDGVNEAKNLERTPSPNRENEAKNSEKT 302
            N   + E++PS ++  NEA + E TPS    NEA + EK+
Sbjct: 166 TNEAPSKEEVPS-NEATNEALSKEETPSNEATNEAPSKEKS 205



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
 Frame = +3

Query: 12  APEDSELLDSEAKNLV----KTPSPDGVNEATNLEKTPSPDGPDGENEATHLEKTPSLDG 179
           AP   E   +EA N      + PS +  NEA + E+ P+ +     NEA   E+ PS + 
Sbjct: 64  APSKEEAPSNEATNEALSKEEAPSNEATNEAPSKEEAPNNEAT---NEAPSKEEAPSNEA 120

Query: 180 ENVVNNLEKMPSLDDGVNEAKNLERTPSPNRENEAKNSEKTPS 308
            N   + E+ PS ++  NEA + E TPS    NEA + E+TPS
Sbjct: 121 TNEAPSKEEAPS-NEATNEAPSKEETPSNEATNEAPSKEETPS 162


>ref|WP_002505240.1| hypothetical protein, partial [Staphylococcus epidermidis]
           gi|394291276|gb|EJE35096.1| hypothetical protein
           HMPREF1389_12740, partial [Staphylococcus epidermidis
           NIH06004]
          Length = 130

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
 Frame = +3

Query: 12  APEDSELLDSEAKNLV----KTPSPDGVNEATNLEKTPSPDGPDGENEATHLEKTPSLDG 179
           AP   E   +EA N      + PS +  NEA + E+TPS +     NEA   E+ PS + 
Sbjct: 24  APSKEEAPSNEATNEALSKEEAPSNEATNEAPSKEETPSNEAT---NEAPSKEEAPSNEA 80

Query: 180 ENVVNNLEKMPSLDDGVNEAKNLERTPSPNRENEAKNSEKTPS 308
            N   + E+ PS ++  NEA + E TPS    NEA + E+ PS
Sbjct: 81  TNEALSKEEAPS-NEATNEAPSKEETPSNEATNEAPSKEEAPS 122



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
 Frame = +3

Query: 39  SEAKNLVKTPSPDGVNEATNLEKTPS----------PDGPDGE--NEATHLEKTPSLDGE 182
           +EA +  +TPS +  NEA + E+ PS           + P  E  NEA   E+TPS +  
Sbjct: 7   NEAPSKEETPSNEATNEAPSKEEAPSNEATNEALSKEEAPSNEATNEAPSKEETPSNEAT 66

Query: 183 NVVNNLEKMPSLDDGVNEAKNLERTPSPNRENEAKNSEKTPS 308
           N   + E+ PS ++  NEA + E  PS    NEA + E+TPS
Sbjct: 67  NEAPSKEEAPS-NEATNEALSKEEAPSNEATNEAPSKEETPS 107


>ref|WP_002494863.1| hypothetical protein, partial [Staphylococcus epidermidis]
           gi|394233608|gb|EJD79207.1| hypothetical protein
           HMPREF9993_06848, partial [Staphylococcus epidermidis
           NIHLM087]
          Length = 82

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 32/77 (41%), Positives = 48/77 (62%)
 Frame = +3

Query: 60  KTPSPDGVNEATNLEKTPSPDGPDGENEATHLEKTPSLDGENVVNNLEKMPSLDDGVNEA 239
           +TPS +  NEA++ E+TPS + P   NEA+  E+TPS +  N  ++ E+ PS ++  NEA
Sbjct: 2   ETPSNEAPNEASSKEETPSNEAP---NEASSKEETPSNEAPNEASSKEETPS-NEAPNEA 57

Query: 240 KNLERTPSPNRENEAKN 290
            + E TPS    NEA +
Sbjct: 58  SSKEETPSNEAPNEASS 74


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