BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00008113
         (1201 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU35379.1| hypothetical protein MIMGU_mgv1a000476mg [Mimulus...   654   0.0  
gb|AAR08426.1| phytochrome A [Orobanche minor]                        632   e-178
gb|EYU19354.1| hypothetical protein MIMGU_mgv1a000485mg [Mimulus...   629   e-177
ref|XP_006339917.1| PREDICTED: type A phytochrome [Solanum tuber...   614   e-173
sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb...   612   e-172
ref|NP_001234490.1| alternative transcript type 3 [Solanum lycop...   609   e-172
ref|NP_001275384.1| phytochrome A [Solanum tuberosum] gi|7657416...   609   e-172
sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|e...   607   e-171
ref|XP_007031301.1| Phytochrome A [Theobroma cacao] gi|508719906...   602   e-169
gb|AGT50254.1| phytochrome A2 [Ipomoea batatas]                       599   e-169
gb|AGT50253.1| phytochrome A1 [Ipomoea batatas]                       598   e-168
gb|AGT50255.1| phytochrome A3 [Ipomoea batatas]                       597   e-168
gb|ACC60969.1| phytochrome A [Vitis riparia]                          593   e-167
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...   593   e-167
gb|AAR08425.1| phytochrome A [Cuscuta pentagona]                      590   e-166
ref|XP_006423945.1| hypothetical protein CICLE_v10027712mg [Citr...   587   e-165
ref|XP_002512596.1| phytochrome A, putative [Ricinus communis] g...   582   e-164
ref|XP_004302312.1| PREDICTED: phytochrome A-like [Fragaria vesc...   582   e-163
dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]                   581   e-163
gb|EXB57569.1| Phytochrome type A [Morus notabilis]                   578   e-162

>gb|EYU35379.1| hypothetical protein MIMGU_mgv1a000476mg [Mimulus guttatus]
          Length = 1129

 Score =  654 bits (1686), Expect = 0.0
 Identities = 319/401 (79%), Positives = 365/401 (91%), Gaps = 2/401 (0%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            TLVVNACAS+DVKEN+VGVCFIAQD+TAQK++MDKFTRI+GDYK+I+QNPNPLIPPIFG+
Sbjct: 714  TLVVNACASKDVKENIVGVCFIAQDITAQKTIMDKFTRIQGDYKSIIQNPNPLIPPIFGS 773

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRAS-CRLKNQEAYVNLGIVLNNA 359
            DEFGWCSEWN AMTK+SGW +DDV+NKML+GE+FGTN+++ CR+KNQEAYVNLGI LNNA
Sbjct: 774  DEFGWCSEWNPAMTKISGWRKDDVINKMLVGEIFGTNKSNYCRIKNQEAYVNLGIALNNA 833

Query: 360  VTGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRL 539
            VTGQ +EK+PFGF SR GKYVECLLCVSKK+D EG+V GVFCF            HVQRL
Sbjct: 834  VTGQHSEKMPFGFLSRGGKYVECLLCVSKKMDPEGSVTGVFCFLQLASPELQRALHVQRL 893

Query: 540  SEQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKIL 719
            SE+ A+KR +VL+Y+R+E+RNPLSGIIFSRKMMEGT++D+EQKNLLRTS HCQRQLNKIL
Sbjct: 894  SEENALKRSRVLAYIRREIRNPLSGIIFSRKMMEGTDLDDEQKNLLRTSGHCQRQLNKIL 953

Query: 720  DDTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGD 899
            DDTDLDHIIEGYLDLEMVEF LH+VLIASISQVM+KSNGKGI+I D+LAPNLS+ETLYGD
Sbjct: 954  DDTDLDHIIEGYLDLEMVEFNLHEVLIASISQVMMKSNGKGIVIADNLAPNLSNETLYGD 1013

Query: 900  SLRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQV 1079
            SLRLQQVLAAFLLISVT TPS G +G+AA LTKDSIG+++QLGHLE RITHSGGGV QQV
Sbjct: 1014 SLRLQQVLAAFLLISVTSTPSGGSVGVAAKLTKDSIGQSVQLGHLELRITHSGGGVAQQV 1073

Query: 1080 LSQMF-GDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            L QMF GD+ +A +EGISLFISRKLVKLMNGDVQYLREAG+
Sbjct: 1074 LDQMFGGDEAEASDEGISLFISRKLVKLMNGDVQYLREAGK 1114


>gb|AAR08426.1| phytochrome A [Orobanche minor]
          Length = 1123

 Score =  632 bits (1629), Expect = e-178
 Identities = 309/400 (77%), Positives = 361/400 (90%), Gaps = 1/400 (0%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +L+VNACAS+DVKENVVGVCFIAQD+T QKSMMDKFTRIEGDY++I+QNPNPLIPPIFGT
Sbjct: 708  SLIVNACASKDVKENVVGVCFIAQDITTQKSMMDKFTRIEGDYRSIIQNPNPLIPPIFGT 767

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            DEFGWCSEWNAAM K+SGW R+ V++KMLLGEVFG N+A CRLKNQEAYVNLG+VLNN V
Sbjct: 768  DEFGWCSEWNAAMIKLSGWGREAVIDKMLLGEVFGLNKACCRLKNQEAYVNLGVVLNNTV 827

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TGQ++ K+ FGFFSRSGKYV CLLCVSKK+D+EG+V G+FCF            H+QR+S
Sbjct: 828  TGQESGKVSFGFFSRSGKYVACLLCVSKKVDSEGSVTGLFCFLQLASPELQQALHIQRIS 887

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTA KRL+VL+Y+R+E+R+PLSGIIFSRK+MEGT++++EQKN++RTSLHCQ Q+NKIL+
Sbjct: 888  EQTASKRLRVLAYIRREIRSPLSGIIFSRKLMEGTDLNDEQKNIVRTSLHCQSQMNKILE 947

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            DTDLDHIIEGYLDLEMVEFKLH+VLIASISQV+ KSNGKGI IVD+LAPNLS+ETLYGDS
Sbjct: 948  DTDLDHIIEGYLDLEMVEFKLHEVLIASISQVISKSNGKGIKIVDNLAPNLSNETLYGDS 1007

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
            LRLQQVLAAFLLI+V  TPS GQLG+AA+L KDSIG+ +QLG LE RITH GGGVPQ++L
Sbjct: 1008 LRLQQVLAAFLLIAVDSTPSGGQLGVAATLAKDSIGEFVQLGRLECRITH-GGGVPQEIL 1066

Query: 1083 SQMFGDD-VDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            +QMFGD+  DA E+GISLFISRKLVKLM GD+QYLREAGR
Sbjct: 1067 NQMFGDEPTDASEDGISLFISRKLVKLMKGDIQYLREAGR 1106


>gb|EYU19354.1| hypothetical protein MIMGU_mgv1a000485mg [Mimulus guttatus]
          Length = 1125

 Score =  629 bits (1621), Expect = e-177
 Identities = 310/400 (77%), Positives = 355/400 (88%), Gaps = 1/400 (0%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +LVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEG+YKAIVQNPNPLIPPIFGT
Sbjct: 709  SLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGEYKAIVQNPNPLIPPIFGT 768

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGT-NRASCRLKNQEAYVNLGIVLNNA 359
            DEFGWCSEWN +M K+SGW R D+++KML+GEVFG  N+A C LKNQEA VNLGI LN+A
Sbjct: 769  DEFGWCSEWNPSMIKLSGWDRQDMIDKMLIGEVFGVHNKACCCLKNQEALVNLGIALNSA 828

Query: 360  VTGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRL 539
            VTGQD+EK+PFGFFSR+GKY+ECLL VSKKLD EGAV G+FCF            H+QRL
Sbjct: 829  VTGQDSEKIPFGFFSRNGKYIECLLSVSKKLDGEGAVTGLFCFLHLASQELQQAIHIQRL 888

Query: 540  SEQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKIL 719
            SEQTA+K+ +VL+Y++KE+ NP++GI F+RKMMEGT +DEEQK LL+ SLHCQ QLNKIL
Sbjct: 889  SEQTALKKSRVLAYIKKEISNPVAGIKFTRKMMEGTELDEEQKKLLQISLHCQHQLNKIL 948

Query: 720  DDTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGD 899
            +DTDLDHIIEGYLDLEM EFKLHDVLIASISQVM+KSN KGIMIVD LAPNLS+E  +GD
Sbjct: 949  EDTDLDHIIEGYLDLEMTEFKLHDVLIASISQVMMKSNEKGIMIVDKLAPNLSTELFFGD 1008

Query: 900  SLRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQV 1079
            S RLQQVLA FLL+SVTYTPS GQL IAA+L K+SIG++++LGHLEFRITHSGGGV Q++
Sbjct: 1009 SARLQQVLATFLLVSVTYTPSGGQLTIAATLAKNSIGQSVKLGHLEFRITHSGGGVAQEL 1068

Query: 1080 LSQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            LS+MFGD+ +A EEGI+LFISRKLVKLMNGDVQYLREAGR
Sbjct: 1069 LSEMFGDEEEASEEGINLFISRKLVKLMNGDVQYLREAGR 1108


>ref|XP_006339917.1| PREDICTED: type A phytochrome [Solanum tuberosum]
          Length = 1123

 Score =  614 bits (1583), Expect = e-173
 Identities = 294/399 (73%), Positives = 352/399 (88%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +L+VNACAS+DV+++VVGVCFIAQD+T QKS+MDKFTRIEGDY+AI+QNP+PLIPPIFGT
Sbjct: 709  SLIVNACASKDVRDSVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGT 768

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            D+FGWCSEWN+AMTK++GW RDDVM+KMLLGEVFGT  A CRLKNQEA+VN G++LNNA+
Sbjct: 769  DQFGWCSEWNSAMTKLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAI 828

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TGQ++EK+PFGFF+R GKYVECLLCVSK+LD EGAV G+FCF            HVQRLS
Sbjct: 829  TGQESEKIPFGFFARYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLS 888

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTA+KRLKVL+Y+R+++RNPLSGIIFSRKM+EGT++ EEQKN+L TS  CQRQL+KILD
Sbjct: 889  EQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILD 948

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            DTDLD IIEGYLDLEM+EFKLH+VL+ASISQVM+KSNGK IMI +D+  +L +ETLYGDS
Sbjct: 949  DTDLDSIIEGYLDLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDS 1008

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
             RLQQVLA FLL+SV  TPS G+L I+  LTKD IG+++QL  LEFRI H+GGGVP+++L
Sbjct: 1009 PRLQQVLANFLLVSVNSTPSGGKLSISGKLTKDRIGESVQLALLEFRIRHTGGGVPEELL 1068

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            SQMFG + DA EEGISL +SRKLVKLMNG+VQYLREAGR
Sbjct: 1069 SQMFGSEADASEEGISLLVSRKLVKLMNGEVQYLREAGR 1107


>sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb|AAB21533.2| type A
            phytochrome [Solanum tuberosum]
          Length = 1123

 Score =  612 bits (1577), Expect = e-172
 Identities = 293/399 (73%), Positives = 351/399 (87%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +L+VNACAS+DV+++VVGVCFIAQD+T QKS+MDKFTRIEGDY+AI+QNP+PLIPPIFGT
Sbjct: 709  SLIVNACASKDVRDSVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGT 768

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            D+FGWCSEWN+AMT ++GW RDDVM+KMLLGEVFGT  A CRLKNQEA+VN G++LNNA+
Sbjct: 769  DQFGWCSEWNSAMTMLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAI 828

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TGQ++EK+PFGFF+R GKYVECLLCVSK+LD EGAV G+FCF            HVQRLS
Sbjct: 829  TGQESEKIPFGFFARYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLS 888

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTA+KRLKVL+Y+R+++RNPLSGIIFSRKM+EGT++ EEQKN+L TS  CQRQL+KILD
Sbjct: 889  EQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILD 948

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            DTDLD IIEGYLDLEM+EFKLH+VL+ASISQVM+KSNGK IMI +D+  +L +ETLYGDS
Sbjct: 949  DTDLDSIIEGYLDLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDS 1008

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
             RLQQVLA FLL+SV  TPS G+L I+  LTKD IG+++QL  LEFRI H+GGGVP+++L
Sbjct: 1009 PRLQQVLANFLLVSVNSTPSGGKLSISGKLTKDRIGESVQLALLEFRIRHTGGGVPEELL 1068

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            SQMFG + DA EEGISL +SRKLVKLMNG+VQYLREAGR
Sbjct: 1069 SQMFGSEADASEEGISLLVSRKLVKLMNGEVQYLREAGR 1107


>ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
            gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
            gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
            gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
            gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
          Length = 1123

 Score =  609 bits (1571), Expect = e-172
 Identities = 292/399 (73%), Positives = 349/399 (87%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +L+VNACAS+DV++NVVGVCF+A D+T QKS+MDKFTRIEGDY+AI+QNP+PLIPPIFGT
Sbjct: 709  SLIVNACASKDVRDNVVGVCFMAHDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGT 768

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            D+FGWCSEWN AMTK++GW RDDVM+KMLLGEVFGT  A CRLKNQEA+VN G+VLNNA+
Sbjct: 769  DQFGWCSEWNTAMTKLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAI 828

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TGQ++EK+PFGFF+R GKYVECLLCVSK+LD EGAV G+FCF            +VQRLS
Sbjct: 829  TGQESEKIPFGFFARYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALYVQRLS 888

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTA+KRLKVL+Y+R+++RNPLSGIIFSRKM+EGT++ EEQKN+L TS  CQRQLNKILD
Sbjct: 889  EQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLNKILD 948

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            DTDLD II+GYLDLEM+EFKLH+VL+ASISQVM+KSNGK IMI +D+  +L +ETLYGDS
Sbjct: 949  DTDLDSIIDGYLDLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDS 1008

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
             RLQQVLA FLL+SV  TPS GQL I+  LTKD IG+++QL  LEFRI H+GGGVP+++L
Sbjct: 1009 PRLQQVLANFLLVSVNATPSGGQLSISGRLTKDRIGESVQLALLEFRIRHTGGGVPEELL 1068

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
             QMFG + DA EEGISL +SRKLVKLMNG+VQYLREAG+
Sbjct: 1069 GQMFGSEADASEEGISLLVSRKLVKLMNGEVQYLREAGQ 1107


>ref|NP_001275384.1| phytochrome A [Solanum tuberosum] gi|76574169|gb|ABA46868.1|
            phytochrome A [Solanum tuberosum]
          Length = 1123

 Score =  609 bits (1571), Expect = e-172
 Identities = 293/399 (73%), Positives = 349/399 (87%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +L+VNACAS+DV+++VVGVCFIAQD+T QKS+MDKFTRIEGDY+AI+QNP+PLIPPIFGT
Sbjct: 709  SLIVNACASKDVRDSVVGVCFIAQDITGQKSIMDKFTRIEGDYRAIIQNPHPLIPPIFGT 768

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            D+FGWCSEWN+AMTK++GW RDDVM+KMLLGEVFGT  A CRLKNQEA+VN G++LNNA+
Sbjct: 769  DQFGWCSEWNSAMTKLTGWRRDDVMDKMLLGEVFGTQAACCRLKNQEAFVNFGVILNNAI 828

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TGQ++EK+PFGFF R GKYVECLLCVSK+LD EGAV G+FCF            HVQRLS
Sbjct: 829  TGQESEKIPFGFFGRYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLS 888

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTA+KRLKVL+Y+R++++NPLSGIIFS KM+EGT++ EEQKN+L TS  CQRQLNKILD
Sbjct: 889  EQTALKRLKVLAYIRRQIKNPLSGIIFSWKMLEGTSLGEEQKNILHTSAQCQRQLNKILD 948

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            DTDLD IIEGYLDLEM+EFKLH+VL+ASISQVM+KSNGK IMI +D+  +L +ETLYGDS
Sbjct: 949  DTDLDSIIEGYLDLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDS 1008

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
             RLQQVLA FLL+SV  TPS GQL I+  LTKD IG+++QL  LEFRI H+GGGVP+++L
Sbjct: 1009 PRLQQVLANFLLVSVNSTPSGGQLSISGRLTKDRIGESVQLALLEFRIRHTGGGVPEELL 1068

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            SQM G +VDA EEGI L +SRKLVKLMNG+VQYLREAGR
Sbjct: 1069 SQMLGSEVDASEEGIFLLVSRKLVKLMNGEVQYLREAGR 1107


>sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|emb|CAA47284.1| type-A
            phytochrome [Nicotiana tabacum]
          Length = 1124

 Score =  607 bits (1565), Expect = e-171
 Identities = 292/399 (73%), Positives = 351/399 (87%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +L+VNACASRDV ++VVGVCFIAQD+T QK++MDKFTRIEGDY+AI+QNP+PLIPPIFGT
Sbjct: 709  SLIVNACASRDVGDSVVGVCFIAQDITGQKNIMDKFTRIEGDYRAIIQNPHPLIPPIFGT 768

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            D+FGWCSEWN+AMTK++GW RDDV++KMLLGEVFGT  A CRLKNQEA+VN G+VLNNA+
Sbjct: 769  DQFGWCSEWNSAMTKLTGWRRDDVIDKMLLGEVFGTQAACCRLKNQEAFVNFGVVLNNAM 828

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TGQ+  K+ FGFF+R+GKYVECLLCVSK+LD EGAV G+FCF            H+QRLS
Sbjct: 829  TGQECAKISFGFFARNGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALHIQRLS 888

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTA+KRLKVL+Y+R+++RNPLSGIIFSRKM+EGTN+ EEQKN+LRTS  CQRQLNKILD
Sbjct: 889  EQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILD 948

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            DTDLD II+GYLDLEM+EFKLH+VL+ASISQ+M+KSNGK IMIV+D+  +L +ETLYGDS
Sbjct: 949  DTDLDSIIDGYLDLEMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDS 1008

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
             RLQQVLA FLL+ V  TPS GQL I+ +LTKD IG+++QL  LE RI+H+GGGVP+++L
Sbjct: 1009 PRLQQVLANFLLVCVNSTPSGGQLSISGTLTKDRIGESVQLALLEVRISHTGGGVPEELL 1068

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            SQMFG + +A EEGISL ISRKLVKLMNG+VQYLREAGR
Sbjct: 1069 SQMFGTEAEASEEGISLLISRKLVKLMNGEVQYLREAGR 1107


>ref|XP_007031301.1| Phytochrome A [Theobroma cacao] gi|508719906|gb|EOY11803.1|
            Phytochrome A [Theobroma cacao]
          Length = 1121

 Score =  602 bits (1552), Expect = e-169
 Identities = 292/399 (73%), Positives = 345/399 (86%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +LVVNACA+RD+ ENVVGVCF+AQD+T QK +MDKFTRIEGDYKAIVQNPNPLIPPIFG 
Sbjct: 706  SLVVNACANRDLHENVVGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNPNPLIPPIFGM 765

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            DEFGWCSEWN AMTK++GW RD+V++KMLLGEVFGT+ A CRLK+Q+++VNLG+VLNNA+
Sbjct: 766  DEFGWCSEWNPAMTKLTGWKRDEVVDKMLLGEVFGTHIACCRLKSQDSFVNLGVVLNNAM 825

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TG + EK+PFGFF+RSGKYVECLLCV+KKLD E AV GVFCF            HVQRLS
Sbjct: 826  TGHEPEKVPFGFFARSGKYVECLLCVNKKLDREDAVTGVFCFLQLASHELQQALHVQRLS 885

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTAMKRLK L+Y+++++RNPLSGIIFSRKMMEGT +  EQK LL+TS  CQRQL+KILD
Sbjct: 886  EQTAMKRLKALAYLKRQIRNPLSGIIFSRKMMEGTELGPEQKRLLQTSTLCQRQLSKILD 945

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            D+DLD II+GYLDLEM++F LH+VL+ASISQVM+KSNGKGI IV+D    + +ETLYGDS
Sbjct: 946  DSDLDSIIDGYLDLEMIDFTLHEVLVASISQVMMKSNGKGIRIVNDTEEEVMTETLYGDS 1005

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
            +RLQQVLA FLLISV +TP+ GQL + ASLTKD +G+++ L HLE RITH+GGGVP+ +L
Sbjct: 1006 VRLQQVLADFLLISVNFTPNGGQLVVVASLTKDQLGQSVHLAHLELRITHAGGGVPEALL 1065

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            SQMFG D DA EEGISL ISRKLVKLMNGD+QYLREAGR
Sbjct: 1066 SQMFGSDGDASEEGISLLISRKLVKLMNGDIQYLREAGR 1104


>gb|AGT50254.1| phytochrome A2 [Ipomoea batatas]
          Length = 1127

 Score =  599 bits (1545), Expect = e-169
 Identities = 286/399 (71%), Positives = 349/399 (87%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +L+VNACASRDV+E+VVGVCFIAQD+T QK++MDKFTRIEGDY+AI+QNPNPLIPPIFGT
Sbjct: 712  SLIVNACASRDVQESVVGVCFIAQDITGQKTIMDKFTRIEGDYRAIIQNPNPLIPPIFGT 771

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            DEFGWCSEWN+AMT +SGW RD+VM+KMLLGEVFGT +A CRLKNQEA+VNLG+VLNNA+
Sbjct: 772  DEFGWCSEWNSAMTNLSGWCRDEVMDKMLLGEVFGTQKACCRLKNQEAFVNLGVVLNNAI 831

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TGQ +EK  FGFF+R+GKYVECLL VSK+LD EGAV G+FCF            H Q+LS
Sbjct: 832  TGQVSEKTRFGFFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQALHFQKLS 891

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTAMKRLKVL+Y+R++V+NPLSGI+FSRKM+EGT + ++QK++L TS  CQ+QL+K+LD
Sbjct: 892  EQTAMKRLKVLAYIRRQVKNPLSGIMFSRKMLEGTELGKDQKSILHTSAQCQQQLSKVLD 951

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            DTDLD IIEGYLDLEMVEFKL +VL ASISQVM KSNGK + I++D+A N+  ETLYGDS
Sbjct: 952  DTDLDCIIEGYLDLEMVEFKLDEVLQASISQVMTKSNGKSLRIINDIADNILCETLYGDS 1011

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
            LRLQQ+L+ FL ++V +TPS GQL +++ LTKD+ G++IQL HLEFR+TH+GGGVP+++L
Sbjct: 1012 LRLQQILSEFLSVAVNFTPSGGQLALSSKLTKDNFGESIQLAHLEFRLTHTGGGVPEELL 1071

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            +QMFG + DA E+GISL ISRKLVKLMNGDVQYLREAGR
Sbjct: 1072 TQMFGSEADASEDGISLLISRKLVKLMNGDVQYLREAGR 1110


>gb|AGT50253.1| phytochrome A1 [Ipomoea batatas]
          Length = 1127

 Score =  598 bits (1541), Expect = e-168
 Identities = 285/399 (71%), Positives = 349/399 (87%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +L+VNACASRDV+E+VVGVC IAQD+T QK++MDKFTRIEGDY+AI+QNPNPLIPPIFGT
Sbjct: 712  SLIVNACASRDVQESVVGVCLIAQDITGQKTIMDKFTRIEGDYRAIIQNPNPLIPPIFGT 771

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            DEFGWCSEWN+AMT +SGW RD+VM+KMLLGEVFGT +A CRLKNQEA+VNLG+VLNNA+
Sbjct: 772  DEFGWCSEWNSAMTNLSGWCRDEVMDKMLLGEVFGTQKACCRLKNQEAFVNLGVVLNNAI 831

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TGQ +EK  FGFF+R+GKYVECLL VSK+LD EGAV G+FCF            H Q+LS
Sbjct: 832  TGQVSEKTRFGFFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQALHFQKLS 891

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTAMKRLKVL+Y+R++V+NPLSGI+FSRKM+EGT + ++QK++L TS  CQ+QL+K+LD
Sbjct: 892  EQTAMKRLKVLAYIRRQVKNPLSGIMFSRKMLEGTELGKDQKSILHTSAQCQQQLSKVLD 951

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            DTDLD IIEGYLDLEMVEFKL +VL ASISQVM KSNGK + I++D+A N+  ETLYGDS
Sbjct: 952  DTDLDCIIEGYLDLEMVEFKLDEVLQASISQVMTKSNGKSLRIINDIADNILCETLYGDS 1011

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
            LRLQQ+L+ FL ++V +TPS GQL +++ LTKD++G++IQL HLEFR+TH+GGGVP+++L
Sbjct: 1012 LRLQQILSEFLSVAVNFTPSGGQLALSSKLTKDNLGESIQLAHLEFRLTHTGGGVPEELL 1071

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            +QMFG + DA E+GISL ISRKLVKLMNGDVQYLREAGR
Sbjct: 1072 TQMFGSEADASEDGISLLISRKLVKLMNGDVQYLREAGR 1110


>gb|AGT50255.1| phytochrome A3 [Ipomoea batatas]
          Length = 1127

 Score =  597 bits (1538), Expect = e-168
 Identities = 284/399 (71%), Positives = 349/399 (87%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +L+VNACASRDV+E+VVGVCFIAQD+T QK++MDKFTRIEGDY+AI+QNPNPLIPPIFGT
Sbjct: 712  SLIVNACASRDVQESVVGVCFIAQDITGQKTIMDKFTRIEGDYRAIIQNPNPLIPPIFGT 771

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            DEFGWCSEWN+AMT +SGW RD+VM+KMLLGEVFGT +A CRLKNQEA+VNLG+VLNNA+
Sbjct: 772  DEFGWCSEWNSAMTNLSGWCRDEVMDKMLLGEVFGTQKACCRLKNQEAFVNLGVVLNNAI 831

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TGQ +EK  FGFF+R+GKYVECLL VSK+LD EGAV G+FCF              Q+LS
Sbjct: 832  TGQVSEKTRFGFFARNGKYVECLLSVSKRLDREGAVTGLFCFLQLASQELQQALRFQKLS 891

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTAMKRLKVL+Y+R++V+NPLSGI+FSRKM+EGT + ++QK++L TS  CQ+QL+K+LD
Sbjct: 892  EQTAMKRLKVLAYIRRQVKNPLSGIMFSRKMLEGTELGKDQKSILHTSAQCQQQLSKVLD 951

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            DTDLD IIEGYLDLEMVEFKL +VL ASISQVM KSNGK + I++D+A N+  ETLYGDS
Sbjct: 952  DTDLDCIIEGYLDLEMVEFKLDEVLQASISQVMTKSNGKSLRIINDIADNILCETLYGDS 1011

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
            LRLQQ+L+ FL ++V +TPS GQL +++ LTKD++G++IQL HLEFR+TH+GGGVP+++L
Sbjct: 1012 LRLQQILSEFLSVAVNFTPSGGQLALSSKLTKDNLGESIQLAHLEFRLTHTGGGVPEELL 1071

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            +QMFG + DA E+GISL ISRKLVKLMNGD+QYLREAGR
Sbjct: 1072 TQMFGSEADASEDGISLLISRKLVKLMNGDIQYLREAGR 1110


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score =  593 bits (1530), Expect = e-167
 Identities = 290/399 (72%), Positives = 343/399 (85%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +LVVNACASRD+ ENVVGVCF+AQD+T+QK++MDKFTRIEGDYKAIVQNPNPLIPPIFGT
Sbjct: 708  SLVVNACASRDLDENVVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGT 767

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            DEFGWCSEWN AM K+SGW R++VM+KMLLGEVFGT+ A CRLKN+EA+V LGIVLN+ +
Sbjct: 768  DEFGWCSEWNPAMVKLSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVM 827

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TG+++EK+ FGFFS+SGKYVECLL VSKKLD EGAV GVFCF            H+QRLS
Sbjct: 828  TGRESEKVSFGFFSKSGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLS 887

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTA+KRLK L+Y++++++NPLSGIIFSRKMME T++ EEQ+ +L TS  CQRQL+KILD
Sbjct: 888  EQTALKRLKALAYIKRQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILD 947

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            D DLD IIEGYLDLEMVEF L +VL+ASISQVMIKSNGKGI IV+D    + +ETLYGD 
Sbjct: 948  DHDLDSIIEGYLDLEMVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDG 1007

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
            LRLQQVLA FLLISV +TP  GQL +AASL KD +G+++ L HLE RITH+G GVP+Q+L
Sbjct: 1008 LRLQQVLADFLLISVNFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGVPEQLL 1067

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            +QMFG++ DA EEGISL ISRKLVKLMNGDVQYLREAG+
Sbjct: 1068 NQMFGNNGDASEEGISLLISRKLVKLMNGDVQYLREAGK 1106


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score =  593 bits (1530), Expect = e-167
 Identities = 290/399 (72%), Positives = 343/399 (85%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +LVVNACASRD+ ENVVGVCF+AQD+T+QK++MDKFTRIEGDYKAIVQNPNPLIPPIFGT
Sbjct: 708  SLVVNACASRDLHENVVGVCFVAQDITSQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGT 767

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            DEFGWCSEWN AM K+SGW R++VM+KMLLGEVFGT+ A CRLKN+EA+V LGIVLN+ +
Sbjct: 768  DEFGWCSEWNPAMVKLSGWNREEVMDKMLLGEVFGTHMACCRLKNREAFVGLGIVLNSVM 827

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TG+++EK+ FGFFS+SGKYVECLL VSKKLD EGAV GVFCF            H+QRLS
Sbjct: 828  TGRESEKVSFGFFSKSGKYVECLLSVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLS 887

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTA+KRLK L+Y++++++NPLSGIIFSRKMME T++ EEQ+ +L TS  CQRQL+KILD
Sbjct: 888  EQTALKRLKALAYIKRQIKNPLSGIIFSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILD 947

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            D DLD IIEGYLDLEMVEF L +VL+ASISQVMIKSNGKGI IV+D    + +ETLYGD 
Sbjct: 948  DHDLDSIIEGYLDLEMVEFTLREVLVASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDG 1007

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
            LRLQQVLA FLLISV +TP  GQL +AASL KD +G+++ L HLE RITH+G GVP+Q+L
Sbjct: 1008 LRLQQVLADFLLISVNFTPGGGQLSVAASLIKDRLGESVHLVHLELRITHAGNGVPEQLL 1067

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            +QMFG++ DA EEGISL ISRKLVKLMNGDVQYLREAG+
Sbjct: 1068 NQMFGNNGDASEEGISLLISRKLVKLMNGDVQYLREAGK 1106


>gb|AAR08425.1| phytochrome A [Cuscuta pentagona]
          Length = 1119

 Score =  590 bits (1521), Expect = e-166
 Identities = 280/399 (70%), Positives = 347/399 (86%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +LVVNACASRDV+E+VVGVCFIAQD+T QK++MDKFTRIEGDY+AI+QNPNPLIPPIFGT
Sbjct: 704  SLVVNACASRDVQESVVGVCFIAQDITGQKTVMDKFTRIEGDYRAIIQNPNPLIPPIFGT 763

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            DEFGWCSEWN+AMTK+SGW RD+V++KM+LGEVFGT +A CRLK+ EA+V LG+VLNNA+
Sbjct: 764  DEFGWCSEWNSAMTKLSGWRRDEVIDKMVLGEVFGTQKACCRLKSHEAFVTLGVVLNNAI 823

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TG +++K  FGF +R+GKYVECLL V+K+L+ +GAVIG+FCF            H Q+LS
Sbjct: 824  TGHESDKTVFGFCTRNGKYVECLLSVTKRLNQDGAVIGLFCFLQLASQELQQALHFQKLS 883

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTA KRLKVL+Y+RK+V+NPLSGI+FSRKM+EGT +  +Q+N+L TS  CQ+QL+K+LD
Sbjct: 884  EQTATKRLKVLAYLRKQVKNPLSGIMFSRKMLEGTELGNDQQNILHTSAQCQQQLSKVLD 943

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            DTDLD IIEGYLDLEMVEFKL +VL+ASISQVM KSNGK + +++D+A N+  ETLYGDS
Sbjct: 944  DTDLDCIIEGYLDLEMVEFKLDEVLLASISQVMTKSNGKSLRVINDVAENVLCETLYGDS 1003

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
            LRLQQVLA FL ++V +TPS GQL +++SLTKD +G+++QL HLEFR+THSGGGVP+++L
Sbjct: 1004 LRLQQVLAEFLSVAVNFTPSGGQLAVSSSLTKDHLGQSVQLAHLEFRVTHSGGGVPEELL 1063

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            +QMFG DVDA EEGISL +SR LVKLMNGDVQY REAGR
Sbjct: 1064 TQMFGSDVDALEEGISLLVSRNLVKLMNGDVQYHREAGR 1102


>ref|XP_006423945.1| hypothetical protein CICLE_v10027712mg [Citrus clementina]
            gi|568853345|ref|XP_006480323.1| PREDICTED: phytochrome
            A-like [Citrus sinensis] gi|557525879|gb|ESR37185.1|
            hypothetical protein CICLE_v10027712mg [Citrus
            clementina]
          Length = 1117

 Score =  587 bits (1513), Expect = e-165
 Identities = 282/399 (70%), Positives = 339/399 (84%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            TL+VNACASRD+ +NVVGVCF+AQD+T QK++MDKFTRIEGDYKAIVQNPNPLIPPIFG+
Sbjct: 706  TLIVNACASRDLHDNVVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGS 765

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            DEFGWC EWN AM K++GW R++V++K+LL EVFGTN A CRLKNQEA+VNLGIVLN A+
Sbjct: 766  DEFGWCCEWNPAMVKLTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAM 825

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            +GQD EK+PFGFF+R+GKY ECLLCV+KKLD EGAV GVFCF            HVQRLS
Sbjct: 826  SGQDPEKVPFGFFARNGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLS 885

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTA+KRLK L+Y ++++RNPLSGIIFSRKMMEGT +  EQK LL TS  CQRQL+KILD
Sbjct: 886  EQTALKRLKALAYTKRQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILD 945

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            D+DLD II+GYLDLEMVEF L++VL+ASISQVM+KSN KGI IV++ A  + SETLYGDS
Sbjct: 946  DSDLDSIIDGYLDLEMVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDS 1005

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
            +RLQQVLA FL IS+ + P+ GQL +++SLTKD +G+++ L +LE RITH+GGG+P+ +L
Sbjct: 1006 IRLQQVLADFLSISINFVPNGGQLMVSSSLTKDQLGRSVHLAYLELRITHAGGGIPEPLL 1065

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
             QMFG + D  EEGISL ISRKLVKLMNGDVQYLREAG+
Sbjct: 1066 DQMFGSEGDTSEEGISLLISRKLVKLMNGDVQYLREAGK 1104


>ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
            gi|223548557|gb|EEF50048.1| phytochrome A, putative
            [Ricinus communis]
          Length = 1124

 Score =  582 bits (1501), Expect = e-164
 Identities = 282/399 (70%), Positives = 336/399 (84%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +LVVNACASRD+ ENVVGVCF+AQD+T QK++MDKFTRIEGDYKAIVQNPNPLIPPIFGT
Sbjct: 709  SLVVNACASRDISENVVGVCFVAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGT 768

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            DEFGWCSEWN AM K++GW R++VM+KMLLGEVFG NRA C LKNQEA+VNLG+++NNA+
Sbjct: 769  DEFGWCSEWNPAMAKLTGWKREEVMDKMLLGEVFGINRACCCLKNQEAFVNLGVLINNAM 828

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            T Q  EK+ F FF+R+ KYVECLLCVSKKLD EGAV GVFCF            H+QRLS
Sbjct: 829  TSQVPEKVSFSFFARNKKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHIQRLS 888

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTA+KRLK L+Y++++++NPLSGI+FSRK+ME T +D EQK LL TS  CQRQL+KILD
Sbjct: 889  EQTALKRLKTLAYIKRQIQNPLSGIMFSRKLMEITELDAEQKQLLHTSAQCQRQLSKILD 948

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            D+D+D I+EGYLDLEMVEF LH+VLIA+ISQV IKS GKGI IV+D A  + +ETLYGDS
Sbjct: 949  DSDIDSIVEGYLDLEMVEFTLHEVLIAAISQVTIKSKGKGIRIVNDAAEVIMTETLYGDS 1008

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
            +RLQQVLA FL  SV +TP  GQL IAA  TKD +G+++ L HLE RITH+GGG+P+ +L
Sbjct: 1009 IRLQQVLADFLAASVDFTPPGGQLTIAAKFTKDQLGQSVHLVHLELRITHAGGGIPEPLL 1068

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            +QMFG D D  +EG+SLFISRKLVKLMNGDVQYLREAG+
Sbjct: 1069 NQMFGSDGDVSDEGVSLFISRKLVKLMNGDVQYLREAGK 1107


>ref|XP_004302312.1| PREDICTED: phytochrome A-like [Fragaria vesca subsp. vesca]
          Length = 1124

 Score =  582 bits (1499), Expect = e-163
 Identities = 281/399 (70%), Positives = 336/399 (84%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +LVVNACASRD+ ENVVGVCF+AQD+T QK++MDKFTRIEGDYKAIVQNPNPLIPPIFGT
Sbjct: 709  SLVVNACASRDIHENVVGVCFVAQDITGQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGT 768

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            DEFGWCSEWN AMTK +GW R++VM+KMLLGEVFG + A C LKNQEA+VNLG+V+N A+
Sbjct: 769  DEFGWCSEWNPAMTKSTGWKREEVMDKMLLGEVFGIHMACCPLKNQEAFVNLGVVINRAM 828

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TG+ +EK+PFGF++R GKY ECLLCVSKKLD+EGAV GVFCF            HVQRLS
Sbjct: 829  TGEVSEKVPFGFWNRGGKYTECLLCVSKKLDSEGAVTGVFCFLQLASLELQQALHVQRLS 888

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTA+KR K L+Y+++++RNPLSGI+FSRKM+EGT +  EQK L+ TS  CQ+QL+KILD
Sbjct: 889  EQTAVKRFKALAYIKRQIRNPLSGILFSRKMIEGTELGAEQKQLIHTSAQCQQQLSKILD 948

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            D+DLD II+GYLDLEMVEF L +VL+ASISQVMIKS+ K I IV D    + +ETLYGDS
Sbjct: 949  DSDLDSIIDGYLDLEMVEFTLQEVLVASISQVMIKSSAKSIRIVQDANEEIMTETLYGDS 1008

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
            LRLQQVLA FL +SV Y PS GQL +A +LTKD +G+++ L HLEFRI+H+GGG+P+ +L
Sbjct: 1009 LRLQQVLADFLSVSVNYMPSGGQLTLATNLTKDQLGQSVHLAHLEFRISHAGGGIPEGLL 1068

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            +QMFG D D  EEGISL ISRKLVKLMNGDVQYLREAG+
Sbjct: 1069 NQMFGTDGDISEEGISLLISRKLVKLMNGDVQYLREAGK 1107


>dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]
          Length = 1124

 Score =  581 bits (1497), Expect = e-163
 Identities = 280/399 (70%), Positives = 335/399 (83%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +LVVNACASRD+ ENVVGVCF+AQD+T QK +MDKFTRIEGDYKAIVQNPNPLIPPIFGT
Sbjct: 709  SLVVNACASRDIHENVVGVCFVAQDITGQKIVMDKFTRIEGDYKAIVQNPNPLIPPIFGT 768

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            DEFGWCSEWN AMTK++GW R++VM+KMLLGEVFG + A C LKNQEA+VNLG+V+N A+
Sbjct: 769  DEFGWCSEWNPAMTKLTGWKREEVMDKMLLGEVFGIHMACCPLKNQEAFVNLGVVINRAM 828

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TG+ +EK+PFGF++R GKY ECLLCVSKKLD+EGAV GVFCF            HVQRLS
Sbjct: 829  TGEVSEKVPFGFWNRGGKYTECLLCVSKKLDSEGAVTGVFCFLQLASPELQQALHVQRLS 888

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQTA+KR K L+Y+++++RNPLSGI+FSRKM+EGT +  EQK L+ TS  CQ+QL+KILD
Sbjct: 889  EQTAVKRFKALAYIKRQIRNPLSGILFSRKMIEGTELGAEQKQLIHTSAQCQQQLSKILD 948

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            D+DLD II+GYLDLEMVEF L +VL+ASISQVMIKSN K I  V D    + +ETLYGDS
Sbjct: 949  DSDLDSIIDGYLDLEMVEFTLQEVLVASISQVMIKSNAKSIRTVQDANEEIMTETLYGDS 1008

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
            LRLQQVLA F+ +SV Y P  GQL +A +LTKD +G+++ L HLEFRI+H+GGGVP+++L
Sbjct: 1009 LRLQQVLADFISVSVNYMPPGGQLTLATNLTKDQLGQSVHLAHLEFRISHAGGGVPEELL 1068

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            +QMFG D D  EEGISL ISRKLVKLMNGDVQYLREAG+
Sbjct: 1069 NQMFGTDGDISEEGISLLISRKLVKLMNGDVQYLREAGK 1107


>gb|EXB57569.1| Phytochrome type A [Morus notabilis]
          Length = 1130

 Score =  578 bits (1489), Expect = e-162
 Identities = 278/399 (69%), Positives = 337/399 (84%)
 Frame = +3

Query: 3    TLVVNACASRDVKENVVGVCFIAQDVTAQKSMMDKFTRIEGDYKAIVQNPNPLIPPIFGT 182
            +LVVNACASRD+  NVVGVCF+AQD+TAQK+MMDKFTRIEGDYKAIVQN NPLIPPIFG 
Sbjct: 709  SLVVNACASRDLNGNVVGVCFVAQDLTAQKTMMDKFTRIEGDYKAIVQNRNPLIPPIFGA 768

Query: 183  DEFGWCSEWNAAMTKVSGWTRDDVMNKMLLGEVFGTNRASCRLKNQEAYVNLGIVLNNAV 362
            DEFGWCSEWN AMTK++GW R++V++KMLLGEVFG +   CRLKNQEA+VNLG+VLNNA+
Sbjct: 769  DEFGWCSEWNPAMTKITGWKREEVIDKMLLGEVFGVSMTCCRLKNQEAFVNLGVVLNNAM 828

Query: 363  TGQDNEKLPFGFFSRSGKYVECLLCVSKKLDAEGAVIGVFCFXXXXXXXXXXXXHVQRLS 542
            TGQ++EK+PFGFF+R+GKY+ECLLCVSKKLD +GAV GVFCF            HVQRL 
Sbjct: 829  TGQESEKVPFGFFARNGKYIECLLCVSKKLDRDGAVTGVFCFLQLASLELQQALHVQRLM 888

Query: 543  EQTAMKRLKVLSYMRKEVRNPLSGIIFSRKMMEGTNMDEEQKNLLRTSLHCQRQLNKILD 722
            EQ A KRLK L+Y+++++RNPLSGIIFSRKMMEGT +  EQK LL TS  CQRQL+KILD
Sbjct: 889  EQIATKRLKALAYIKRQIRNPLSGIIFSRKMMEGTELGLEQKQLLHTSAQCQRQLSKILD 948

Query: 723  DTDLDHIIEGYLDLEMVEFKLHDVLIASISQVMIKSNGKGIMIVDDLAPNLSSETLYGDS 902
            D+DLD+IIEGY DLEMVEF LH++L+A+ SQVM+K   KGI +V+D +   +++TLYGDS
Sbjct: 949  DSDLDNIIEGYSDLEMVEFTLHEILVAATSQVMMKIKAKGIRLVEDASEETTNDTLYGDS 1008

Query: 903  LRLQQVLAAFLLISVTYTPSRGQLGIAASLTKDSIGKTIQLGHLEFRITHSGGGVPQQVL 1082
            LRLQQVLA FLLISV +TP+ GQ+ IAA+LTKD +G+++ L  LE R+TH+G G+P+ +L
Sbjct: 1009 LRLQQVLADFLLISVNFTPNGGQIVIAANLTKDHLGESVHLVRLELRLTHTGSGIPESLL 1068

Query: 1083 SQMFGDDVDACEEGISLFISRKLVKLMNGDVQYLREAGR 1199
            +QMFG D D  EEGISL ISRKLVKLMNGDVQYL+EAG+
Sbjct: 1069 NQMFGTDGDVSEEGISLLISRKLVKLMNGDVQYLKEAGK 1107