BLASTX nr result
ID: Mentha22_contig00003139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha22_contig00003139
(378 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI32444.3| unnamed protein product [Vitis vinifera] 72 8e-11
ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding prote... 72 8e-11
emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera] 72 8e-11
ref|XP_007199852.1| hypothetical protein PRUPE_ppa005661mg [Prun... 72 1e-10
gb|EYU37704.1| hypothetical protein MIMGU_mgv1a006826mg [Mimulus... 71 1e-10
ref|XP_006349628.1| PREDICTED: polyadenylate-binding protein RBP... 69 7e-10
ref|XP_006349627.1| PREDICTED: polyadenylate-binding protein RBP... 69 7e-10
ref|XP_002302445.2| RNA-binding protein 47 [Populus trichocarpa]... 69 7e-10
ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP... 69 7e-10
ref|XP_004153627.1| PREDICTED: polyadenylate-binding protein RBP... 69 7e-10
ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP... 69 7e-10
ref|NP_001275430.1| DNA-binding protein-like [Solanum tuberosum]... 69 7e-10
ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] g... 69 7e-10
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote... 69 9e-10
emb|CBI19566.3| unnamed protein product [Vitis vinifera] 69 9e-10
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote... 69 9e-10
ref|XP_007017331.1| RNA-binding protein 47C isoform 3 [Theobroma... 68 1e-09
ref|XP_007017329.1| RNA-binding protein 47C isoform 1 [Theobroma... 68 1e-09
ref|XP_002518798.1| nuclear acid binding protein, putative [Rici... 68 2e-09
ref|XP_006374988.1| RNA-binding protein 47 [Populus trichocarpa]... 68 2e-09
>emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/42 (78%), Positives = 34/42 (80%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
QRLNGTVIGKQTVRLSWGR +KQ R D N QWNGAYYG Q
Sbjct: 274 QRLNGTVIGKQTVRLSWGRNPASKQWRNDSNNQWNGAYYGGQ 315
>ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/42 (78%), Positives = 34/42 (80%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
QRLNGTVIGKQTVRLSWGR +KQ R D N QWNGAYYG Q
Sbjct: 348 QRLNGTVIGKQTVRLSWGRNPASKQWRNDSNNQWNGAYYGGQ 389
>emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/42 (78%), Positives = 34/42 (80%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
QRLNGTVIGKQTVRLSWGR +KQ R D N QWNGAYYG Q
Sbjct: 366 QRLNGTVIGKQTVRLSWGRNPASKQWRNDSNNQWNGAYYGGQ 407
>ref|XP_007199852.1| hypothetical protein PRUPE_ppa005661mg [Prunus persica]
gi|462395252|gb|EMJ01051.1| hypothetical protein
PRUPE_ppa005661mg [Prunus persica]
Length = 449
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
Q LNGTVIGKQTVRLSWGR+ GNKQ R D + QWNGA+YG Q
Sbjct: 381 QMLNGTVIGKQTVRLSWGRSQGNKQWRSDSSNQWNGAHYGGQ 422
>gb|EYU37704.1| hypothetical protein MIMGU_mgv1a006826mg [Mimulus guttatus]
Length = 430
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/43 (79%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQ-WNGAYYGRQ 126
+RLNG VIGKQTVRLSWGR MGNKQ R D NGQ +NG YYGRQ
Sbjct: 365 ERLNGAVIGKQTVRLSWGRNMGNKQFRTDQNGQGYNGGYYGRQ 407
>ref|XP_006349628.1| PREDICTED: polyadenylate-binding protein RBP47 isoform X2 [Solanum
tuberosum]
Length = 424
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/42 (71%), Positives = 32/42 (76%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
++LNGTVIG QTVRLSWGR NKQ R D QWNG YYGRQ
Sbjct: 345 EKLNGTVIGTQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQ 386
>ref|XP_006349627.1| PREDICTED: polyadenylate-binding protein RBP47 isoform X1 [Solanum
tuberosum]
Length = 428
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/42 (71%), Positives = 32/42 (76%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
++LNGTVIG QTVRLSWGR NKQ R D QWNG YYGRQ
Sbjct: 349 EKLNGTVIGTQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQ 390
>ref|XP_002302445.2| RNA-binding protein 47 [Populus trichocarpa]
gi|550344888|gb|EEE81718.2| RNA-binding protein 47
[Populus trichocarpa]
Length = 429
Score = 68.9 bits (167), Expect = 7e-10
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
Q+LNGTVIGKQTVRLSWGR G+KQ R D + WNGAYYG Q
Sbjct: 352 QKLNGTVIGKQTVRLSWGRNPGHKQHRADFSSPWNGAYYGGQ 393
>ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
Q LNGTVIGKQTVRLSWGR+ GNKQ R D N QWNG YG Q
Sbjct: 364 QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQ 405
>ref|XP_004153627.1| PREDICTED: polyadenylate-binding protein RBP47C'-like, partial
[Cucumis sativus]
Length = 81
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
Q LNGTVIGKQTVRLSWGR+ GNKQ R D N QWNG YG Q
Sbjct: 8 QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQ 49
>ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/42 (76%), Positives = 33/42 (78%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
Q LNGTVIGKQTVRLSWGR+ GNKQ R D N QWNG YG Q
Sbjct: 363 QGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQ 404
>ref|NP_001275430.1| DNA-binding protein-like [Solanum tuberosum]
gi|82621116|gb|ABB86246.1| DNA-binding protein-like
[Solanum tuberosum]
Length = 423
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/42 (71%), Positives = 32/42 (76%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
++LNGTVIG QTVRLSWGR NKQ R D QWNG YYGRQ
Sbjct: 344 EKLNGTVIGTQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQ 385
>ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum
lycopersicum]
Length = 428
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/42 (71%), Positives = 32/42 (76%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
++LNGTVIG QTVRLSWGR NKQ R D QWNG YYGRQ
Sbjct: 349 EKLNGTVIGAQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQ 390
>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 68.6 bits (166), Expect = 9e-10
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
Q+LNGTVIGKQTVRLSWGR NKQ R D QW+GAYYG Q
Sbjct: 332 QKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQ 373
>emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 68.6 bits (166), Expect = 9e-10
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
Q+LNGTVIGKQTVRLSWGR NKQ R D QW+GAYYG Q
Sbjct: 247 QKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQ 288
>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 68.6 bits (166), Expect = 9e-10
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
Q+LNGTVIGKQTVRLSWGR NKQ R D QW+GAYYG Q
Sbjct: 341 QKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQ 382
>ref|XP_007017331.1| RNA-binding protein 47C isoform 3 [Theobroma cacao]
gi|508722659|gb|EOY14556.1| RNA-binding protein 47C
isoform 3 [Theobroma cacao]
Length = 436
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
Q+LNGTVIGKQTVRLSWGR NKQ R D QW+GAYYG Q
Sbjct: 356 QKLNGTVIGKQTVRLSWGRNPANKQFRADYGNQWSGAYYGGQ 397
>ref|XP_007017329.1| RNA-binding protein 47C isoform 1 [Theobroma cacao]
gi|508722657|gb|EOY14554.1| RNA-binding protein 47C
isoform 1 [Theobroma cacao]
Length = 435
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
Q+LNGTVIGKQTVRLSWGR NKQ R D QW+GAYYG Q
Sbjct: 355 QKLNGTVIGKQTVRLSWGRNPANKQFRADYGNQWSGAYYGGQ 396
>ref|XP_002518798.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542179|gb|EEF43723.1| nuclear acid binding
protein, putative [Ricinus communis]
Length = 438
Score = 67.8 bits (164), Expect = 2e-09
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
Q LNGT IGKQTVRLSWGR+ NKQ R D N QWNGAY+G Q
Sbjct: 370 QSLNGTTIGKQTVRLSWGRSPANKQWRGDHNNQWNGAYFGGQ 411
>ref|XP_006374988.1| RNA-binding protein 47 [Populus trichocarpa]
gi|550323302|gb|ERP52785.1| RNA-binding protein 47
[Populus trichocarpa]
Length = 429
Score = 67.8 bits (164), Expect = 2e-09
Identities = 31/42 (73%), Positives = 32/42 (76%)
Frame = +1
Query: 1 QRLNGTVIGKQTVRLSWGRTMGNKQSRMDGNGQWNGAYYGRQ 126
Q+LNGTVIGKQTVRLSWGR NKQ R D WNGAYYG Q
Sbjct: 349 QKLNGTVIGKQTVRLSWGRNPANKQFRADFGSPWNGAYYGGQ 390