BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha22_contig00002542
         (2764 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus...  1635   0.0  
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su...  1608   0.0  
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su...  1606   0.0  
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...  1597   0.0  
ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun...  1593   0.0  
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ...  1588   0.0  
ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su...  1583   0.0  
ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II su...  1578   0.0  
ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phas...  1576   0.0  
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su...  1573   0.0  
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1573   0.0  
ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II su...  1572   0.0  
emb|CBI18915.3| unnamed protein product [Vitis vinifera]             1570   0.0  
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su...  1570   0.0  
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su...  1570   0.0  
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su...  1570   0.0  
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su...  1570   0.0  
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr...  1570   0.0  
ref|XP_002530639.1| DNA-directed RNA polymerase II largest subun...  1568   0.0  
ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [A...  1565   0.0  

>gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus guttatus]
          Length = 1842

 Score = 1635 bits (4234), Expect = 0.0
 Identities = 803/868 (92%), Positives = 832/868 (95%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MDLRFPFSPAEVAKVR+VQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETCMANMA+CPGHFGHLELAKPM+HIGF+K VLSILRCVCFNCSKILA+ EEPK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQAMRIRNPKNRL+KIL+ACK+K+KC+GGDEIDGH QD EEPVKKSRGGCGAQQPK+++
Sbjct: 121  FKQAMRIRNPKNRLRKILDACKNKTKCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            DGMK+VA+YK           MPEPVERKQ LSAEKVLSILKRITDEDC+ LGLNPKFAR
Sbjct: 181  DGMKMVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFHVATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            LLRYSAWHQE EKGFITPGDTQVRIEKGELL+GTLCKK LG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFSMGIGDTIAD  TM KI+ETI+ AKNEV ELIRAAQEKQL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            E EPGRTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
            lycopersicum]
          Length = 1846

 Score = 1608 bits (4163), Expect = 0.0
 Identities = 784/868 (90%), Positives = 825/868 (95%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MDLRFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETCMANMA+CPGHFGHLELAKPM+HIGF+K VLSILRCVCFNCSKILA+ ++PK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQAMRIRNPKNRL+K+L+ACK+K+KCEGGDEID  GQD EEPVKKSRGGCGAQQPK+++
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            DGMK+VA+YK           MPEPVERKQ LSAE+VLSILKR++DEDC  LGLNP+FAR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQ L         SVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFH+ATYFDNDLPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRK+TKRDTFI+KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            LLRYSAWH + EKG+ITPGDTQVRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQ AFS+GIGDTIAD  TM KI+ETI+ AK +V ELI+AAQEK L
Sbjct: 661  RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
            tuberosum]
          Length = 1839

 Score = 1606 bits (4158), Expect = 0.0
 Identities = 783/868 (90%), Positives = 824/868 (94%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MDLRFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETCMANMA+CPGHFGHLELAKPM+HIGF+K VLSILRCVCFNCSKILA+ ++PK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQAMRIRNPKNRL+K+L+ACK+K+KCEGGDEID  G D EEPVKKSRGGCGAQQPK+++
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            DGMK+VA+YK           MPEPVERKQ LSAE+VLSILKR++DEDC  LGLNP+FAR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQ L         SVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFH+ATYFDNDLPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRK+TKRDTFI+KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            LLRYSAWH + EKG+ITPGDTQVRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQ AFS+GIGDTIAD  TM KI+ETI+ AK +V ELI+AAQEK L
Sbjct: 661  RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
            vinifera]
          Length = 1848

 Score = 1597 bits (4134), Expect = 0.0
 Identities = 779/868 (89%), Positives = 824/868 (94%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCSKILA+ E+ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA +IRNPKNRLKKIL+ACK+KSKCEGGDEI+    D++EPVKKSRGGCGAQQPKLT+
Sbjct: 121  FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK++A+YK           +PEPVERKQ LSAE+VL++LKRI+DEDC  LGLNPK+AR
Sbjct: 181  EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFHVATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            +DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI+KDVFMNILMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            LLR SAWH E E GFITPGDTQVRIEKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQN FS+GIGDTIAD  TM KI+ETI+KAKNEV ELIRAAQE+QL
Sbjct: 661  RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
            [Populus trichocarpa] gi|550338614|gb|ERP60834.1|
            DNA-directed RNA polymerase II largest subunit family
            protein [Populus trichocarpa]
          Length = 1837

 Score = 1593 bits (4125), Expect = 0.0
 Identities = 774/868 (89%), Positives = 825/868 (95%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSV+ IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCSKILA+ E+ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA++I+NPK+RLKKIL+ACK+K+KCEGGDEID  GQDNEEPVKKSRGGCGAQQPKLT+
Sbjct: 121  FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK++A+YK           +PEPVERKQ L+AE+VLS+LKRI+DEDC+ LGL+PK+AR
Sbjct: 181  EGMKMIAEYKVQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQER+GAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFHVATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVPAPTI+KP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            L+R +AWH + E+G ITPGDT VRIEKGELLSGTLCKKTLG+SSGSLIHVIWEEVGPDAA
Sbjct: 601  LIRTAAWHMDSERGMITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFS+GIGDTIAD  TM KI+ETI+ AKNEV +LIR AQ K+L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKNEVKDLIRKAQNKEL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
            cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|590702285|ref|XP_007046586.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
          Length = 1861

 Score = 1588 bits (4112), Expect = 0.0
 Identities = 776/868 (89%), Positives = 817/868 (94%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MDLRFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+GGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCSKILA+ EE K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA++I+NPKNRLKKIL+ACK+KSKCEGGDEID  GQD EEPVKKSRGGCGAQQPKL++
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            DGMK++A+YK           +PEPVERKQ L+AE+VLS+LKRI+DEDC+ LGLNPKFAR
Sbjct: 181  DGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTH LAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFHVATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            LLR SAWH E E GFITPGDTQVRIEKGELLSGTLCKK LG+SSGSLIHVIWEEVGPDAA
Sbjct: 601  LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFS+GIGDTIAD  TM KI+ETI+KAK EV  LI  AQ K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKDL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            E EPGRTMMESFEN+VNQVLNKARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine
            max]
          Length = 1827

 Score = 1583 bits (4098), Expect = 0.0
 Identities = 767/868 (88%), Positives = 820/868 (94%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+GGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRK+KCETC A+MA+CPGHFGHLELAKPM+HIGF+KTVL+I+RCVCFNCSKILA+  + K
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA+RIRNPKNRLKKIL+ACK+KSKCEGGDEID  GQD +EPVKKSRGGCGAQQPK+T+
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK++A+YKA          +PEPVERKQ LSAE+VL +LKRI+DEDC+ LGLNPK+AR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFH+ATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            L+RYS+WH E E+G ITPGDT VRIEKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFS+GIGDTIAD  TM  I++TI+ AK +V +LIR AQEK+L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIREAQEKKL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            EAEPGRTMM+SFENRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer
            arietinum]
          Length = 1834

 Score = 1578 bits (4085), Expect = 0.0
 Identities = 764/868 (88%), Positives = 821/868 (94%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPKIGGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETC A+MA+CPGHFG+LELAKPM+HIGF+KTVLSI+RCVCFNCSKILA+ ++ K
Sbjct: 61   DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEQDHK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA+RI++PKNRL+KIL+ACK+K+KCEGGD+ID  G D EEPVKKSRGGCGAQQPK+T+
Sbjct: 121  FKQALRIKSPKNRLRKILDACKNKTKCEGGDDIDMPGHDTEEPVKKSRGGCGAQQPKITI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK++A+YKA          +PEPVERKQ LSAE+VL +LKRI+DEDC+ LGLNPK+AR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDW+ILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNG+PAHIIS
Sbjct: 241  PDWLILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFH+ATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD+
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDS 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI KDVFMNILMWWEDFDGKVP PTILKP+P+WTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFISKDVFMNILMWWEDFDGKVPTPTILKPEPMWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            L+RYS+WH E EKG ITPGDT VRIEKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LIRYSSWHNENEKGPITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFS+GIGDTIAD  TM  I++TI++AK +V +LIR AQEK+L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISQAKEKVKQLIREAQEKKL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            EAEPGRTMMESFENRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMESFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris]
            gi|561031277|gb|ESW29856.1| hypothetical protein
            PHAVU_002G104500g [Phaseolus vulgaris]
          Length = 1834

 Score = 1576 bits (4082), Expect = 0.0
 Identities = 764/868 (88%), Positives = 817/868 (94%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRK+KCETC A+MA+CPGHFGHLELAKPM+HIGF+KTVL+I+RCVCFNCSKILA+  + K
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA+RIRNPKNRLKKIL+ACK+KSKCEGGDEID  GQD +EPVKKSRGGCGAQQPK+T+
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK++A+YKA          +PEPVERKQ LSAE+VL +LKRI+DEDC+ LGLNPK+AR
Sbjct: 181  EGMKIIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFH+ATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI KDVFMN LMWWEDFDGKVP PTILKP+PLWTGKQVFNLIIP+ IN
Sbjct: 541  LLGCRKITKRDTFISKDVFMNTLMWWEDFDGKVPTPTILKPEPLWTGKQVFNLIIPKPIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            L+RYS+WH E E+G ITPGDT VRIEKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFS+GIGDTIAD  TM  I++TI+ AK +V +LIR AQEK+L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIRDAQEKKL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            EAEPGRTMM+SFENRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
            sativus]
          Length = 1853

 Score = 1573 bits (4074), Expect = 0.0
 Identities = 765/868 (88%), Positives = 814/868 (93%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MDLRFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVL+I+R VCFNCSKIL + E+PK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA+RI+NPKNRL+KIL+ACK+K+KCEGGDEID  GQD+++PVKKSRGGCGAQQPK+++
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK+ A+YKA          +PEPVERKQ L+AE+VL ILKRITDEDCK LGLNPK+AR
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFH+ATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            L R SAWH E E G ITPGDT VRIEKGELLSGTLCKK LG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFS+GIGDTIAD  TM KI+ETI+ AKNEV  LI+ AQE+ L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            E EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB1-like [Cucumis sativus]
          Length = 1832

 Score = 1573 bits (4074), Expect = 0.0
 Identities = 765/868 (88%), Positives = 814/868 (93%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MDLRFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVL+I+R VCFNCSKIL + E+PK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA+RI+NPKNRL+KIL+ACK+K+KCEGGDEID  GQD+++PVKKSRGGCGAQQPK+++
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK+ A+YKA          +PEPVERKQ L+AE+VL ILKRITDEDCK LGLNPK+AR
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFH+ATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            L R SAWH E E G ITPGDT VRIEKGELLSGTLCKK LG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFS+GIGDTIAD  TM KI+ETI+ AKNEV  LI+ AQE+ L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            E EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Glycine max] gi|571435633|ref|XP_006573537.1| PREDICTED:
            DNA-directed RNA polymerase II subunit 1-like isoform X2
            [Glycine max]
          Length = 1827

 Score = 1572 bits (4070), Expect = 0.0
 Identities = 763/868 (87%), Positives = 815/868 (93%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+GGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRK+KCETC A+MA+CPGHFGHLELAKPM+HIGF+KTVL+I+RCVCFNCSKILA+  + K
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA+RIRNPKNRLKKIL+ACK+KSKCEGGDEID  GQD EE VKKSRGGCGAQQPK+T+
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTEESVKKSRGGCGAQQPKITI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK++A+YKA          +PEPVERKQ LSAE+VL +LKRI+DEDC+ LGLNPK+AR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFH+ATYFDN+LPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFISKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            L+RYS+WH E E+G ITPGDT VRIEKGELL+GTLCKKTLG+ SG LIHVIWEEVGPDAA
Sbjct: 601  LIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTYSGGLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFS+GIGDTIAD  TM  I++TI+ AK +V +LIR A EK+L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIREAHEKKL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            EAEPGR+MM+SFENRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EAEPGRSMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIP+GF+DRTLPHFTKDD GPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>emb|CBI18915.3| unnamed protein product [Vitis vinifera]
          Length = 1565

 Score = 1570 bits (4066), Expect = 0.0
 Identities = 779/916 (85%), Positives = 825/916 (90%), Gaps = 48/916 (5%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAE----- 503
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCSKILA+     
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADELTEN 120

Query: 504  -------------------------AEEPKFKQAMRIRNPKNRLKKILEACKSKSKCEGG 608
                                     +E+ KFKQA +IRNPKNRLKKIL+ACK+KSKCEGG
Sbjct: 121  VKWISKSKFANMKSLKLGHSLLHCKSEDHKFKQAQKIRNPKNRLKKILDACKNKSKCEGG 180

Query: 609  DEIDGHGQDNEEPVKKSRGGCGAQQPKLTLDGMKLVADYKAXXXXXXXXXXMPEPVERKQ 788
            DEI+    D++EPVKKSRGGCGAQQPKLT++GMK++A+YK           +PEPVERKQ
Sbjct: 181  DEIETQALDSDEPVKKSRGGCGAQQPKLTIEGMKMIAEYKIQRKKNDDPEQLPEPVERKQ 240

Query: 789  ILSAEKVLSILKRITDEDCKTLGLNPKFARPDWMILQVLXXXXXXXXXSVMMDTSSRSE- 965
             LSAE+VL++LKRI+DEDC  LGLNPK+ARPDWMILQVL         SVMMDTSSRSE 
Sbjct: 241  QLSAERVLNVLKRISDEDCILLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEA 300

Query: 966  -----------------DDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVAT 1094
                             DDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQLLQFHVAT
Sbjct: 301  SLSVLVNDRLKLSMWLWDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVAT 360

Query: 1095 YFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 1274
            YFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID
Sbjct: 361  YFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID 420

Query: 1275 QLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLK 1454
            +LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQRLDLRYLK
Sbjct: 421  ELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLK 480

Query: 1455 KSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 1634
            KSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN
Sbjct: 481  KSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYN 540

Query: 1635 ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 1814
            ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT
Sbjct: 541  ADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDT 600

Query: 1815 FIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQINLLRYSAWHQEGE 1994
            FI+KDVFMNILMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIP+QINLLR SAWH E E
Sbjct: 601  FIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESE 660

Query: 1995 KGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAARKFLGHTQWLVN 2174
             GFITPGDTQVRIEKGELL+GTLCKKTLG+S+GSLIHVIWEEVGPDAARKFLGHTQWLVN
Sbjct: 661  TGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVN 720

Query: 2175 YWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQLEAEPGRTMMESF 2354
            YWLLQN FS+GIGDTIAD  TM KI+ETI+KAKNEV ELIRAAQE+QLEAEPGRTMMESF
Sbjct: 721  YWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPGRTMMESF 780

Query: 2355 ENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 2534
            ENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR
Sbjct: 781  ENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKR 840

Query: 2535 IPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTAVKTSET 2714
            IP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGREGLIDTAVKTSET
Sbjct: 841  IPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSET 900

Query: 2715 GYIQRRLVKAMEDIMV 2762
            GYIQRRLVKAMEDIMV
Sbjct: 901  GYIQRRLVKAMEDIMV 916


>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
            [Citrus sinensis]
          Length = 1963

 Score = 1570 bits (4065), Expect = 0.0
 Identities = 764/868 (88%), Positives = 815/868 (93%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+R VCFNCSKILA+ ++ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA++IRNPKNRLKKIL+ACK+K+KCEGGDEID  GQD EEP+KK++GGCGAQQPKLT+
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK++A+YKA          +PEPVERKQ L+AE+VL +LKRI+DEDC+ LGLNPK+AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVP PTILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            L R +AWH + +KG +T GDT VRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFS+GIGDTIAD  TM  I++TI+KAKN V  LI+ AQ+K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            E EPGRTMMESFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
            [Citrus sinensis]
          Length = 1853

 Score = 1570 bits (4065), Expect = 0.0
 Identities = 764/868 (88%), Positives = 815/868 (93%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+R VCFNCSKILA+ ++ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA++IRNPKNRLKKIL+ACK+K+KCEGGDEID  GQD EEP+KK++GGCGAQQPKLT+
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK++A+YKA          +PEPVERKQ L+AE+VL +LKRI+DEDC+ LGLNPK+AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVP PTILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            L R +AWH + +KG +T GDT VRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFS+GIGDTIAD  TM  I++TI+KAKN V  LI+ AQ+K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            E EPGRTMMESFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
            [Citrus sinensis]
          Length = 1790

 Score = 1570 bits (4065), Expect = 0.0
 Identities = 764/868 (88%), Positives = 815/868 (93%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+R VCFNCSKILA+ ++ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA++IRNPKNRLKKIL+ACK+K+KCEGGDEID  GQD EEP+KK++GGCGAQQPKLT+
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK++A+YKA          +PEPVERKQ L+AE+VL +LKRI+DEDC+ LGLNPK+AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVP PTILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            L R +AWH + +KG +T GDT VRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFS+GIGDTIAD  TM  I++TI+KAKN V  LI+ AQ+K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            E EPGRTMMESFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Citrus sinensis] gi|568825318|ref|XP_006467028.1|
            PREDICTED: DNA-directed RNA polymerase II subunit 1-like
            isoform X2 [Citrus sinensis]
          Length = 1860

 Score = 1570 bits (4065), Expect = 0.0
 Identities = 764/868 (88%), Positives = 815/868 (93%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+R VCFNCSKILA+ ++ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA++IRNPKNRLKKIL+ACK+K+KCEGGDEID  GQD EEP+KK++GGCGAQQPKLT+
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK++A+YKA          +PEPVERKQ L+AE+VL +LKRI+DEDC+ LGLNPK+AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVP PTILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            L R +AWH + +KG +T GDT VRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFS+GIGDTIAD  TM  I++TI+KAKN V  LI+ AQ+K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            E EPGRTMMESFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
            gi|557527347|gb|ESR38597.1| hypothetical protein
            CICLE_v10024686mg [Citrus clementina]
          Length = 1860

 Score = 1570 bits (4064), Expect = 0.0
 Identities = 764/868 (88%), Positives = 814/868 (93%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+R VCFNCSKILA+ ++ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA++IRNPKNRLKKIL+ACK+K+KCEGGDEID  GQD EEP+KK +GGCGAQQPKLT+
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKKKGGCGAQQPKLTI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK++A+YKA          +PEPVERKQ L+AE+VL +LKRI+DEDC+ LGLNPK+AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVP PTILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            L R +AWH + +KG +T GDT VRIEKGELLSGTLCKKTLG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQNAFS+GIGDTIAD  TM  I++TI+KAKN V  LI+ AQ+K L
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            E EPGRTMMESFEN+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_002530639.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus
            communis] gi|223529812|gb|EEF31747.1| DNA-directed RNA
            polymerase II largest subunit, putative [Ricinus
            communis]
          Length = 1855

 Score = 1568 bits (4059), Expect = 0.0
 Identities = 760/868 (87%), Positives = 815/868 (93%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IE SETTERGKPK GGLSD RLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEFSETTERGKPKPGGLSDLRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKCETC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCSKILA+ E+ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEIDGHGQDNEEPVKKSRGGCGAQQPKLTL 698
            FKQA++I+NPKNRLKKIL+ACK+K+KCEGGD+ID H QD +EPVKKSRGGCGAQQP++T+
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKTKCEGGDDIDVHSQDTDEPVKKSRGGCGAQQPRMTI 180

Query: 699  DGMKLVADYKAXXXXXXXXXXMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFAR 878
            +GMK++A+YKA          +PEPVERKQ L+AE+VL +LKRI+D+DC+ LG NPK+AR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDDDCRLLGFNPKYAR 240

Query: 879  PDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1058
            PDWMILQVL         SVMMDTSSRSEDDLTHQLAMIIRHNENLK+QE+ GAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEKGGAPAHIIS 300

Query: 1059 EFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1238
            EFAQLLQFHVATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 1239 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1418
            TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 1419 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1598
            DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 1599 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1778
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 1779 LLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPRQIN 1958
            LLGCRKITKRDTFI+KDVFMNILMWWEDFDGKVPAP ILKP+PLWTGKQVFNLIIP+QIN
Sbjct: 541  LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600

Query: 1959 LLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGPDAA 2138
            L+R +AWH + E+G ITPGDT VRIEKGELLSGT+CKKTLG+S+GSLIHVIWEEVGPDAA
Sbjct: 601  LIRTAAWHSDSERGVITPGDTLVRIEKGELLSGTVCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 2139 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQEKQL 2318
            RKFLGHTQWLVNYWLLQN FS+GIGDTIAD  TM KI+ETI+ AKN V ELIR AQ K+L
Sbjct: 661  RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNAVKELIRKAQNKEL 720

Query: 2319 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMT 2498
            E +PGRTMMESFEN VNQVLN+ARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPKPGRTMMESFENEVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 2499 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMGGRE 2678
            ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 2679 GLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMV 868


>ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda]
            gi|548833823|gb|ERM96260.1| hypothetical protein
            AMTR_s00001p00152770 [Amborella trichopoda]
          Length = 1844

 Score = 1565 bits (4053), Expect = 0.0
 Identities = 767/871 (88%), Positives = 818/871 (93%), Gaps = 3/871 (0%)
 Frame = +3

Query: 159  MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 338
            MD+RFP+SPAEVAKVR+VQFGILSP+EIR MSVV I+HSET ERGKPK  GLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRVVQFGILSPEEIRNMSVVEIQHSETMERGKPKPSGLSDPRLGTI 60

Query: 339  DRKMKCETCMANMADCPGHFGHLELAKPMYHIGFIKTVLSILRCVCFNCSKILAEAEEPK 518
            DRKMKC+TC ANMA+CPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCS+ILA+ E+ +
Sbjct: 61   DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSRILADEEDHR 120

Query: 519  FKQAMRIRNPKNRLKKILEACKSKSKCEGGDEID-GHGQDNEEPVKKSR-GGCGAQQPKL 692
            FKQA++IRNPK RLKK+L+ CK+K+KCEGGD+ID    QD+EE VKK R GGCGAQQPK+
Sbjct: 121  FKQALKIRNPKTRLKKVLDCCKNKTKCEGGDDIDEDQAQDSEEVVKKKRHGGCGAQQPKI 180

Query: 693  TLDGMKLVADYKAXXXXXXXXXXM-PEPVERKQILSAEKVLSILKRITDEDCKTLGLNPK 869
            T++GMK+VA+YK           M PEPVERKQ L+AEKVL++LKRITDEDC+ LGLNPK
Sbjct: 181  TIEGMKMVAEYKLPRKKNDEQEQMLPEPVERKQQLAAEKVLNVLKRITDEDCQLLGLNPK 240

Query: 870  FARPDWMILQVLXXXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAH 1049
            +ARPDWMILQV+         SVMMDTSSRSEDDLTHQLAM+IRHNENLKRQE+NGAPAH
Sbjct: 241  YARPDWMILQVMPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQEKNGAPAH 300

Query: 1050 IISEFAQLLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 1229
            IISEFAQLLQFHVATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 301  IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 360

Query: 1230 SARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 1409
            SARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 361  SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 420

Query: 1410 IIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 1589
            IIR+DGQRLDLRYLKKS D HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 421  IIREDGQRLDLRYLKKSGDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 480

Query: 1590 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 1769
            YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV
Sbjct: 481  YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 540

Query: 1770 QDTLLGCRKITKRDTFIDKDVFMNILMWWEDFDGKVPAPTILKPKPLWTGKQVFNLIIPR 1949
            QDTLLGCRKITKRDTFI+KDVFMNILMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIP+
Sbjct: 541  QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 600

Query: 1950 QINLLRYSAWHQEGEKGFITPGDTQVRIEKGELLSGTLCKKTLGSSSGSLIHVIWEEVGP 2129
            QINL+RYSAWH E E GFITPGDT VRIE+GELLSGTLCKKTLG+SSGSLIHVIWEEVGP
Sbjct: 601  QINLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGP 660

Query: 2130 DAARKFLGHTQWLVNYWLLQNAFSMGIGDTIADHDTMTKISETINKAKNEVNELIRAAQE 2309
            DAARKFLGHTQWLVNYWLLQ AFS+GIGDTIAD  TM KI+ETI+KAKNEV ELI+AAQE
Sbjct: 661  DAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQE 720

Query: 2310 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINIS 2489
            KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINIS
Sbjct: 721  KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 780

Query: 2490 QMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLSPQEFFFHAMG 2669
            QMTACVGQQNVEGKRIPFGF DRTLPHFTKDDYGPESRGFVENSYLRGL+PQEFFFHAMG
Sbjct: 781  QMTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 840

Query: 2670 GREGLIDTAVKTSETGYIQRRLVKAMEDIMV 2762
            GREGLIDTAVKTSETGYIQRRLVKAMEDIMV
Sbjct: 841  GREGLIDTAVKTSETGYIQRRLVKAMEDIMV 871