BLASTX nr result

ID: Magnolia22_contig00034342 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00034342
         (907 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EMC76775.1 hypothetical protein A306_16126, partial [Columba livia]    60   8e-07

>EMC76775.1 hypothetical protein A306_16126, partial [Columba livia]
          Length = 248

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 61/230 (26%), Positives = 91/230 (39%), Gaps = 13/230 (5%)
 Frame = -2

Query: 762 PKMPPSSGRKCSVNSQKCPRKSTARISRKL*KSKDCPNYP*FIIFFN*CKYNHSKKPPGL 583
           PK+ P S +     +QK P+  T +I  K    ++ P +P +         NH K P   
Sbjct: 24  PKIHPKSPQNHPKITQKHPK--TPQIHPK--SPRNNPKHPKYTPKHTKSTQNHPKTPQNT 79

Query: 582 LQS*KLQKCKAFPKYPYWASSSTKQVLALKNKNPKIP--LENTQIPHKKLPKILPNASVV 409
            +  K+      PK+P +  +  K         PK P   +N+     K PKI P    +
Sbjct: 80  QKHPKIS-----PKHPEFTQNQPKITPKSPQDTPKTPQITQNSPKITPKHPKITPKHPKI 134

Query: 408 QKTKFEMYPKYPYWAS----S*KKYPSITLKESEQP---PKTPQNAPFLSTSSSDISKRN 250
                +  P  P        + K +P IT K  + P   P+TPQN           +  +
Sbjct: 135 HPKSPQNTPNTPQITQKHPKTPKNHPKITPKHPKTPQNHPETPQNTQKSPPKHPKYTPNH 194

Query: 249 QNTPNNFIKNAPSSNNLT----KKPQNSPKFLQHPPKMH**SLKRTLTIP 112
             TP N  K+ P     T    + PQN+P   Q+ PK+H  SL +   IP
Sbjct: 195 PETPQNTQKSPPKHPKYTPNHPETPQNTPNHTQNNPKIHPKSLPKHPKIP 244


Top