BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00030243
         (337 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_008808984.1 PREDICTED: polyadenylation and cleavage factor ho...    86   3e-17
XP_008808980.1 PREDICTED: polyadenylation and cleavage factor ho...    86   3e-17
XP_008784554.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a...    86   4e-17
XP_010931817.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a...    84   2e-16
XP_019054573.1 PREDICTED: polyadenylation and cleavage factor ho...    82   9e-16
XP_010267732.1 PREDICTED: polyadenylation and cleavage factor ho...    82   9e-16
XP_010267731.1 PREDICTED: polyadenylation and cleavage factor ho...    82   9e-16
ERN19518.1 hypothetical protein AMTR_s00062p00031880 [Amborella ...    81   2e-15
XP_011628430.1 PREDICTED: polyadenylation and cleavage factor ho...    81   2e-15
XP_010275999.1 PREDICTED: polyadenylation and cleavage factor ho...    79   1e-14
XP_010275998.1 PREDICTED: polyadenylation and cleavage factor ho...    79   1e-14
CBI23183.3 unnamed protein product, partial [Vitis vinifera]           65   8e-10
XP_019078215.1 PREDICTED: polyadenylation and cleavage factor ho...    65   8e-10
XP_010655357.1 PREDICTED: polyadenylation and cleavage factor ho...    65   8e-10
XP_009399215.1 PREDICTED: polyadenylation and cleavage factor ho...    57   3e-07
XP_002316604.2 pre-mRNA cleavage complex-related family protein ...    55   1e-06
JAT62598.1 Pre-mRNA cleavage complex 2 protein Pcf11 [Anthurium ...    54   5e-06
JAT57374.1 Pre-mRNA cleavage complex 2 protein Pcf11, partial [A...    54   5e-06

>XP_008808984.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X2 [Phoenix dactylifera]
          Length = 977

 Score = 85.9 bits (211), Expect = 3e-17
 Identities = 53/122 (43%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
 Frame = +2

Query: 2   KGWSGASPKFHDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALL---------PPQTA 154
           KGW GASPKFHD+++ RGVSSSLQ YG+K ++   E   +H E L           PQTA
Sbjct: 187 KGWQGASPKFHDIEHVRGVSSSLQVYGKKSSMQCSEYNIDHPEVLPARPGVARTGSPQTA 246

Query: 155 VRSASLVTGSESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISP-GIVERASPSH 331
               + +   E      K K  R S    IG  + +SP  + F+RD SP  + ERASPSH
Sbjct: 247 ATCTASMVEVEGPTRQLKIKISRPSPPPIIGPRKSISPPVDRFSRDTSPRRMRERASPSH 306

Query: 332 SG 337
           SG
Sbjct: 307 SG 308


>XP_008808980.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Phoenix dactylifera] XP_008808981.1
           PREDICTED: polyadenylation and cleavage factor homolog
           4-like isoform X1 [Phoenix dactylifera] XP_008808982.1
           PREDICTED: polyadenylation and cleavage factor homolog
           4-like isoform X1 [Phoenix dactylifera] XP_008808983.1
           PREDICTED: polyadenylation and cleavage factor homolog
           4-like isoform X1 [Phoenix dactylifera]
          Length = 1065

 Score = 85.9 bits (211), Expect = 3e-17
 Identities = 53/122 (43%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
 Frame = +2

Query: 2   KGWSGASPKFHDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALL---------PPQTA 154
           KGW GASPKFHD+++ RGVSSSLQ YG+K ++   E   +H E L           PQTA
Sbjct: 275 KGWQGASPKFHDIEHVRGVSSSLQVYGKKSSMQCSEYNIDHPEVLPARPGVARTGSPQTA 334

Query: 155 VRSASLVTGSESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISP-GIVERASPSH 331
               + +   E      K K  R S    IG  + +SP  + F+RD SP  + ERASPSH
Sbjct: 335 ATCTASMVEVEGPTRQLKIKISRPSPPPIIGPRKSISPPVDRFSRDTSPRRMRERASPSH 394

Query: 332 SG 337
           SG
Sbjct: 395 SG 396


>XP_008784554.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
           homolog 4-like [Phoenix dactylifera]
          Length = 1063

 Score = 85.5 bits (210), Expect = 4e-17
 Identities = 52/122 (42%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
 Frame = +2

Query: 2   KGWSGASPKFHDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEA---------LLPPQTA 154
           KGWSGASPKFHD+++ RGVSSSLQ YGRK ++   + + ++ E             P TA
Sbjct: 270 KGWSGASPKFHDIEHARGVSSSLQVYGRKSSMQCNKYDIDNPEVRPSRRGILRAGSPHTA 329

Query: 155 VRSASLVTGSESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISP-GIVERASPSH 331
              AS +   E      KSK  R S    IG  + + P ++ F+R+ SP  ++ERASPSH
Sbjct: 330 ATQASSMVEVEGPTHHSKSKFSRFSPPPIIGPRKSILPLTDRFSRNTSPRRVLERASPSH 389

Query: 332 SG 337
           SG
Sbjct: 390 SG 391


>XP_010931817.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
           homolog 4 [Elaeis guineensis]
          Length = 1070

 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 10/121 (8%)
 Frame = +2

Query: 2   KGWSGASPKFHDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALL---------PPQTA 154
           KGWSG SPKFHD+++ RGVSSSLQ YG+K ++   E + +H E L           P TA
Sbjct: 270 KGWSGGSPKFHDIEHARGVSSSLQVYGQKSSLQCNEYDIDHPEVLPSRRGIVRTGSPLTA 329

Query: 155 VRSASLVTGSESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISP-GIVERASPSH 331
              A+ +   E      KSK  R S    IG  + +SP ++ F+R  SP  +++R SPSH
Sbjct: 330 ATRATSIVEVEGPTRHSKSKFSRFSPPPIIGPRKSVSPPTDRFSRRTSPRRVLKRTSPSH 389

Query: 332 S 334
           S
Sbjct: 390 S 390


>XP_019054573.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X3 [Nelumbo nucifera]
          Length = 906

 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
 Frame = +2

Query: 20  SPKF-HDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLPPQTAVR------SASLVT 178
           +PK+  +VQ  RG+SSSLQ YG+KPTI Y E + +H E + P     R      S     
Sbjct: 83  NPKYLEEVQRGRGISSSLQIYGQKPTIEYGEHDSDHGEVISPRVVVQRLDSQGASTHSSV 142

Query: 179 GSESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISP-GIVERASPSHSG 337
           GS  +L P K +  R SS T IG  R LSP ++GF+ D SP  +V+R SPSHSG
Sbjct: 143 GSAERLLPTKIRLTRPSSPT-IGPARSLSPSNDGFSVDNSPRKVVDRVSPSHSG 195


>XP_010267732.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X2 [Nelumbo nucifera]
          Length = 1049

 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
 Frame = +2

Query: 20  SPKF-HDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLPPQTAVR------SASLVT 178
           +PK+  +VQ  RG+SSSLQ YG+KPTI Y E + +H E + P     R      S     
Sbjct: 235 NPKYLEEVQRGRGISSSLQIYGQKPTIEYGEHDSDHGEVISPRVVVQRLDSQGASTHSSV 294

Query: 179 GSESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISP-GIVERASPSHSG 337
           GS  +L P K +  R SS T IG  R LSP ++GF+ D SP  +V+R SPSHSG
Sbjct: 295 GSAERLLPTKIRLTRPSSPT-IGPARSLSPSNDGFSVDNSPRKVVDRVSPSHSG 347


>XP_010267731.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Nelumbo nucifera]
          Length = 1058

 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 52/114 (45%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
 Frame = +2

Query: 20  SPKF-HDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLPPQTAVR------SASLVT 178
           +PK+  +VQ  RG+SSSLQ YG+KPTI Y E + +H E + P     R      S     
Sbjct: 235 NPKYLEEVQRGRGISSSLQIYGQKPTIEYGEHDSDHGEVISPRVVVQRLDSQGASTHSSV 294

Query: 179 GSESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISP-GIVERASPSHSG 337
           GS  +L P K +  R SS T IG  R LSP ++GF+ D SP  +V+R SPSHSG
Sbjct: 295 GSAERLLPTKIRLTRPSSPT-IGPARSLSPSNDGFSVDNSPRKVVDRVSPSHSG 347


>ERN19518.1 hypothetical protein AMTR_s00062p00031880 [Amborella trichopoda]
          Length = 1045

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
 Frame = +2

Query: 2   KGWSGASPKFHDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLPPQTAVRSASLVTG 181
           +GWSGASP+ H  Q  RGV SS+  YGRKP   Y + + +H + L P +  V SA + +G
Sbjct: 247 EGWSGASPRLHTNQQARGVVSSIPIYGRKPA-SYGDIDLDHNQGLSPGRVGVVSARVPSG 305

Query: 182 S-ESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISPGIV--ERASPSHSG 337
           +  S +A P++K L+  S +  G   P SP    F R+ISP  V  ++ASPS  G
Sbjct: 306 NLSSSIAAPENKILKPLSPSISGSETPSSPSEGAFMREISPARVGHQKASPSRVG 360


>XP_011628430.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Amborella
           trichopoda] XP_011628431.1 PREDICTED: polyadenylation
           and cleavage factor homolog 4 [Amborella trichopoda]
          Length = 1054

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
 Frame = +2

Query: 2   KGWSGASPKFHDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLPPQTAVRSASLVTG 181
           +GWSGASP+ H  Q  RGV SS+  YGRKP   Y + + +H + L P +  V SA + +G
Sbjct: 247 EGWSGASPRLHTNQQARGVVSSIPIYGRKPA-SYGDIDLDHNQGLSPGRVGVVSARVPSG 305

Query: 182 S-ESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISPGIV--ERASPSHSG 337
           +  S +A P++K L+  S +  G   P SP    F R+ISP  V  ++ASPS  G
Sbjct: 306 NLSSSIAAPENKILKPLSPSISGSETPSSPSEGAFMREISPARVGHQKASPSRVG 360


>XP_010275999.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Nelumbo nucifera]
          Length = 895

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 49/112 (43%), Positives = 68/112 (60%), Gaps = 10/112 (8%)
 Frame = +2

Query: 32  HDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLP---------PQTAVRSASLVTGS 184
           +D+Q  RG SSSLQ YGRKP  GY+E + +H E + P            A+R++S+  G+
Sbjct: 74  NDIQQGRGSSSSLQIYGRKPASGYVEFDLDHDEGISPHFGVQGLDSQGAAIRASSV--GA 131

Query: 185 ESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISP-GIVERASPSHSG 337
             +L P K++  R+SS   IG  R L P ++GFA + SP  +VE ASPSHSG
Sbjct: 132 AERLLPTKARLARSSSPARIG-ARSLPPTNDGFAINNSPRRVVEGASPSHSG 182


>XP_010275998.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Nelumbo nucifera]
          Length = 1071

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 49/112 (43%), Positives = 68/112 (60%), Gaps = 10/112 (8%)
 Frame = +2

Query: 32  HDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLP---------PQTAVRSASLVTGS 184
           +D+Q  RG SSSLQ YGRKP  GY+E + +H E + P            A+R++S+  G+
Sbjct: 250 NDIQQGRGSSSSLQIYGRKPASGYVEFDLDHDEGISPHFGVQGLDSQGAAIRASSV--GA 307

Query: 185 ESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISP-GIVERASPSHSG 337
             +L P K++  R+SS   IG  R L P ++GFA + SP  +VE ASPSHSG
Sbjct: 308 AERLLPTKARLARSSSPARIG-ARSLPPTNDGFAINNSPRRVVEGASPSHSG 358


>CBI23183.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1003

 Score = 64.7 bits (156), Expect = 8e-10
 Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
 Frame = +2

Query: 20  SPKFHDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLPPQTAVRSASLVTGS----- 184
           SP   ++Q+ RG SS+L+ YG+KP IGY E +  H E +     A R  S  TGS     
Sbjct: 283 SPVDSNMQHSRGTSSTLKVYGQKPAIGYDEYDSGHTEVISSQARAQRLNS--TGSVGRTP 340

Query: 185 ----ESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISP-GIVERASPSHSG 337
                 KL P  +  +  S++  IG     SP +  F+ D SP  +VERASPSH G
Sbjct: 341 FALGADKLLPSSTARVAKSTSPRIGTAGSSSPPAEKFSMDNSPRRVVERASPSHRG 396


>XP_019078215.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Vitis vinifera]
          Length = 1033

 Score = 64.7 bits (156), Expect = 8e-10
 Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
 Frame = +2

Query: 20  SPKFHDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLPPQTAVRSASLVTGS----- 184
           SP   ++Q+ RG SS+L+ YG+KP IGY E +  H E +     A R  S  TGS     
Sbjct: 243 SPVDSNMQHSRGTSSTLKVYGQKPAIGYDEYDSGHTEVISSQARAQRLNS--TGSVGRTP 300

Query: 185 ----ESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISP-GIVERASPSHSG 337
                 KL P  +  +  S++  IG     SP +  F+ D SP  +VERASPSH G
Sbjct: 301 FALGADKLLPSSTARVAKSTSPRIGTAGSSSPPAEKFSMDNSPRRVVERASPSHRG 356


>XP_010655357.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Vitis vinifera]
          Length = 1046

 Score = 64.7 bits (156), Expect = 8e-10
 Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
 Frame = +2

Query: 20  SPKFHDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLPPQTAVRSASLVTGS----- 184
           SP   ++Q+ RG SS+L+ YG+KP IGY E +  H E +     A R  S  TGS     
Sbjct: 243 SPVDSNMQHSRGTSSTLKVYGQKPAIGYDEYDSGHTEVISSQARAQRLNS--TGSVGRTP 300

Query: 185 ----ESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISP-GIVERASPSHSG 337
                 KL P  +  +  S++  IG     SP +  F+ D SP  +VERASPSH G
Sbjct: 301 FALGADKLLPSSTARVAKSTSPRIGTAGSSSPPAEKFSMDNSPRRVVERASPSHRG 356


>XP_009399215.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Musa acuminata subsp. malaccensis]
           XP_009399216.1 PREDICTED: polyadenylation and cleavage
           factor homolog 4-like isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 1039

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 46/134 (34%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
 Frame = +2

Query: 2   KGWSGASPKFHDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLP----------PQT 151
           +GWSGA+ K H + + R  S  LQAYG+KP+  Y E + +  E LLP          PQT
Sbjct: 259 EGWSGATRKLHSMPHARVSSGGLQAYGQKPSAQYSEYDLDQPE-LLPQRLAVAREGSPQT 317

Query: 152 AVRSASLVTGSESKLAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISPGIVE------ 313
           A+   S +  +   +   K+K            + PLSPR  G  R +SP IV       
Sbjct: 318 AMLRPSSMIDARGSVPYLKNK-----------ISVPLSPRRIGLKRPVSPPIVRSHNGTS 366

Query: 314 ------RASPSHSG 337
                 RAS SH G
Sbjct: 367 PRKIGGRASTSHFG 380


>XP_002316604.2 pre-mRNA cleavage complex-related family protein [Populus
           trichocarpa] EEE97216.2 pre-mRNA cleavage
           complex-related family protein [Populus trichocarpa]
          Length = 1031

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 20  SPKFHDVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLPPQTAVRSASLVTGSESKLA 199
           S + ++VQ+ +G +S+L+ YG KP +GY E E + AE ++  Q  V  ASL  GS +KL 
Sbjct: 224 SSRDNNVQHTKG-TSNLKMYGHKPAVGYDEYETDQAE-VISSQVGVDRASLTLGS-NKLQ 280

Query: 200 PPKSKGL-RASSATGIGQTRPLSPRSNGFARDISP-GIVERASPSH 331
           P  +  L R  S +  G  RP S   + FA   SP   VE  SPSH
Sbjct: 281 PSSTSRLARRLSPSTTGAERPSSSEIDDFAAGNSPRRFVEGLSPSH 326


>JAT62598.1 Pre-mRNA cleavage complex 2 protein Pcf11 [Anthurium amnicola]
          Length = 1039

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
 Frame = +2

Query: 35  DVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLPPQTAVR-------SASLVTGSESK 193
           D+Q  RG+SS+++AY ++  I + + +F+  E L P     R        AS   G+E  
Sbjct: 260 DLQRARGLSSNVRAYEQRSCIQFGDYDFDPPEELSPHHGPARRGSPQIVHASSAVGTERP 319

Query: 194 LAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISPG-IVERASPSHSG 337
           L+  K    R S A   G  R  SP  +GF RD SPG  VERASPS+ G
Sbjct: 320 LSVSK----RTSRA---GLMRSASPPDDGFQRDSSPGRSVERASPSNLG 361


>JAT57374.1 Pre-mRNA cleavage complex 2 protein Pcf11, partial [Anthurium
           amnicola]
          Length = 1050

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
 Frame = +2

Query: 35  DVQNERGVSSSLQAYGRKPTIGYIEDEFEHAEALLPPQTAVR-------SASLVTGSESK 193
           D+Q  RG+SS+++AY ++  I + + +F+  E L P     R        AS   G+E  
Sbjct: 271 DLQRARGLSSNVRAYEQRSCIQFGDYDFDPPEELSPHHGPARRGSPQIVHASSAVGTERP 330

Query: 194 LAPPKSKGLRASSATGIGQTRPLSPRSNGFARDISPG-IVERASPSHSG 337
           L+  K    R S A   G  R  SP  +GF RD SPG  VERASPS+ G
Sbjct: 331 LSVSK----RTSRA---GLMRSASPPDDGFQRDSSPGRSVERASPSNLG 372