BLASTX nr result
ID: Magnolia22_contig00029427
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Magnolia22_contig00029427
(403 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAR88589.1 putative copia-like retrotransposon protein [Oryza sa... 50 1e-08
AAC67200.1 putative retroelement pol polyprotein [Arabidopsis th... 54 2e-08
AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU4406... 48 5e-08
AAU10682.1 putative polyprotein [Oryza sativa Japonica Group] 49 8e-08
XP_012472262.1 PREDICTED: uncharacterized protein LOC105789428 [... 60 8e-08
AAT85031.1 putative polyprotein [Oryza sativa Japonica Group] AB... 49 1e-07
XP_016647521.1 PREDICTED: uncharacterized protein LOC107880499 [... 59 2e-07
XP_019085488.1 PREDICTED: uncharacterized protein LOC104715244 [... 55 2e-07
OMP03555.1 hypothetical protein CCACVL1_02371 [Corchorus capsula... 59 2e-07
AAN04167.1 Putative copia-like retrotransposon polyprotein [Oryz... 49 3e-07
KYP53123.1 Retrovirus-related Pol polyprotein from transposon TN... 57 4e-07
JAT44458.1 Retrovirus-related Pol polyprotein from transposon TN... 52 4e-07
GAU51268.1 hypothetical protein TSUD_412550 [Trifolium subterran... 58 4e-07
AAF02855.1 Similar to retrotransposon proteins [Arabidopsis thal... 54 5e-07
AAK51235.1 polyprotein [Arabidopsis thaliana] 51 6e-07
JAT59554.1 Retrovirus-related Pol polyprotein from transposon TN... 53 6e-07
KYP46820.1 Retrovirus-related Pol polyprotein from transposon TN... 56 6e-07
KYP59913.1 Retrovirus-related Pol polyprotein from transposon TN... 56 7e-07
KYP46819.1 Retrovirus-related Pol polyprotein from transposon TN... 56 7e-07
KYP46792.1 Retrovirus-related Pol polyprotein from transposon TN... 56 7e-07
>AAR88589.1 putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 49.7 bits (117), Expect(2) = 1e-08
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = -3
Query: 266 QFIFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLA 87
+ IFS+VW PA IS+ G FYV F D S ++ ++ L K EV F +FQ LVE
Sbjct: 478 ELIFSNVWGPAP-ISVGGKKFYVSFIDDYSKFTWVYLLKHKSEVFQKFQEFQTLVERFFG 536
Query: 86 AKLI-FRLD*RGEFQ 45
K++ + D GE+Q
Sbjct: 537 HKILAVQTDWGGEYQ 551
Score = 37.0 bits (84), Expect(2) = 1e-08
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = -1
Query: 343 ICDACQKGKSNKLSLFAFSFISESPLNLFF 254
ICDACQKGKS++L S +S PL L F
Sbjct: 452 ICDACQKGKSHQLPYPKSSSVSSQPLELIF 481
>AAC67200.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1402
Score = 54.3 bits (129), Expect(2) = 2e-08
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = -3
Query: 260 IFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLAAK 81
+ D+W P+ S+ GF +Y F DH S +S I+ L K + ++FV F LVEN L K
Sbjct: 525 VHCDLWGPSPITSVQGFRYYAVFIDHYSRFSWIYPLKLKSDFYNIFVAFHKLVENQLNHK 584
Query: 80 L-IFRLD*RGEFQDCPF 33
+ +F+ D GEF + F
Sbjct: 585 ISVFQCDGGGEFVNHKF 601
Score = 31.6 bits (70), Expect(2) = 2e-08
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 343 ICDACQKGKSNKLSLFAFSFISESPL 266
+C+ACQ GKS +L + SF S PL
Sbjct: 497 LCEACQLGKSTRLPFVSSSFTSNRPL 522
>AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU44069.1 putative
polyprotein [Oryza sativa Japonica Group]
Length = 1447
Score = 48.1 bits (113), Expect(2) = 5e-08
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = -3
Query: 266 QFIFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLA 87
+ I+SDVW PAL S+ G +YV F S ++ ++ + K EVI F +FQ LVE L
Sbjct: 516 ELIYSDVWGPAL-TSVGGKQYYVSFIGDYSKFTWLYLIKHKSEVIQKFHEFQALVERLFN 574
Query: 86 AKLI-FRLD*RGEFQ 45
K+I + D GE++
Sbjct: 575 RKIIAMQSDWGGEYE 589
Score = 36.2 bits (82), Expect(2) = 5e-08
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -1
Query: 379 NMIVFSSSDRP*ICDACQKGKSNKLSLFAFSFISESPLNLFF 254
N+ + S++ +CDACQ+GKS++L S +S PL L +
Sbjct: 478 NLPCLAESNKQSVCDACQQGKSHQLPYSRSSSMSSHPLELIY 519
>AAU10682.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 48.9 bits (115), Expect(2) = 8e-08
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = -3
Query: 266 QFIFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLA 87
+ +FSDVW PA S+ G +YV F D S ++ I+ L QK EV F +FQ LVE +
Sbjct: 507 ELVFSDVWGPAPD-SVGGRKYYVSFIDDFSKFTWIYLLKQKSEVFHKFHEFQQLVERIFY 565
Query: 86 AKLI-FRLD*RGEFQ 45
K+I + D GE++
Sbjct: 566 RKIIAMQTDWGGEYE 580
Score = 34.7 bits (78), Expect(2) = 8e-08
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -1
Query: 343 ICDACQKGKSNKLSLFAFSFISESPLNLFF 254
+CDACQKGKS++L + S PL L F
Sbjct: 481 VCDACQKGKSHQLPFLKSTSASNFPLELVF 510
>XP_012472262.1 PREDICTED: uncharacterized protein LOC105789428 [Gossypium
raimondii]
Length = 668
Score = 59.7 bits (143), Expect = 8e-08
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = -3
Query: 266 QFIFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLA 87
Q + +DVW PAL S +GF +YV F D C+ YS ++ LH+K EV+ VF++F VE L
Sbjct: 473 QLVVADVWGPALVTS-NGFRYYVIFTDACTRYSWVYFLHKKSEVLTVFLQFHRQVERTLG 531
Query: 86 AKLIFRLD*RGEFQ 45
+L GEFQ
Sbjct: 532 VQLQTLQTDEGEFQ 545
>AAT85031.1 putative polyprotein [Oryza sativa Japonica Group] ABF96679.1
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1437
Score = 48.5 bits (114), Expect(2) = 1e-07
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = -3
Query: 266 QFIFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLA 87
+ +FSDVW PA S+ +YV F D S ++ I+ L K EV D F +FQ LVE L
Sbjct: 514 ELVFSDVWGPAPQ-SVGNNKYYVSFIDDYSKFTWIYLLKYKSEVFDKFHEFQSLVERLFN 572
Query: 86 AKLI-FRLD*RGEFQ 45
K++ + D GE+Q
Sbjct: 573 RKIVAMQTDWGGEYQ 587
Score = 34.7 bits (78), Expect(2) = 1e-07
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -1
Query: 385 SPNMIVFSSSDRP*ICDACQKGKSNKLSLFAFSFISESPLNLFF 254
S N+ S++ +CDACQK KS++LS + S+ PL L F
Sbjct: 474 SQNLPCLDVSEQVSVCDACQKAKSHQLSFPKSTSESKYPLELVF 517
>XP_016647521.1 PREDICTED: uncharacterized protein LOC107880499 [Prunus mume]
Length = 637
Score = 58.9 bits (141), Expect = 2e-07
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = -3
Query: 266 QFIFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLA 87
Q I SDVW P+ SIDG+ +YV+F D C+ + ++ + K +V VF KF ++ N
Sbjct: 524 QCIHSDVWGPSAVKSIDGYRYYVNFVDECTSFMWLYPIFNKSDVFGVFKKFYAMLTNQYD 583
Query: 86 AKL-IFRLD*RGEFQDCPF 33
AK+ F+ D RGEF F
Sbjct: 584 AKVKTFQTDGRGEFTSTLF 602
>XP_019085488.1 PREDICTED: uncharacterized protein LOC104715244 [Camelina sativa]
Length = 584
Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = -3
Query: 260 IFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLAAK 81
I D+W P+ +S+ GF +YV F + S YS + L K E DVF+ FQ VEN K
Sbjct: 508 IHCDLWGPSPVVSVQGFKYYVVFINAFSRYSWLIPLKTKAEFCDVFIVFQKQVENQFGKK 567
Query: 80 L-IFRLD*RGEFQDCPF 33
+ IF+ D GEF F
Sbjct: 568 IRIFQSDGGGEFMSTRF 584
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 343 ICDACQKGKSNKLSLFAFSFISESPLN 263
+C CQ GKS +L F+ F ++ P++
Sbjct: 480 VCGPCQMGKSCQLPFFSSDFSAKEPID 506
>OMP03555.1 hypothetical protein CCACVL1_02371 [Corchorus capsularis]
Length = 1372
Score = 58.5 bits (140), Expect = 2e-07
Identities = 32/80 (40%), Positives = 44/80 (55%)
Frame = -3
Query: 266 QFIFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLA 87
+ I+SDVW P+ S+ F +YV F DH + Y+ F L QK EV+ VF KF+ VE
Sbjct: 1008 EVIYSDVWSPSRVTSVKDFRYYVSFVDHFTKYTWCFPLKQKSEVLHVFTKFKTSVEK--- 1064
Query: 86 AKLIFRLD*RGEFQDCPFDY 27
F+LD + DC +Y
Sbjct: 1065 ---FFKLDILTVYSDCRGEY 1081
>AAN04167.1 Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] AAP53032.1 retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1042
Score = 49.3 bits (116), Expect(2) = 3e-07
Identities = 33/78 (42%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = -3
Query: 275 KSSQFIFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVEN 96
K + I+SDVW PA S G FYV F D +S I+ L K +V + F FQ LVE
Sbjct: 406 KPLELIYSDVWGPAS-TSFGGKKFYVSFIDSYRKFSWIYFLKHKSDVFEKFHDFQQLVER 464
Query: 95 LLAAKLI-FRLD*RGEFQ 45
L K+I + D GE+Q
Sbjct: 465 LFDRKIIAMQTDWGGEYQ 482
Score = 32.3 bits (72), Expect(2) = 3e-07
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 358 SDRP*ICDACQKGKSNKLSLFAFSFISESPLNLFF 254
S++ +CDACQK KS++L +S PL L +
Sbjct: 378 SNKESVCDACQKAKSHQLPYSNSMSVSNKPLELIY 412
>KYP53123.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 229
Score = 57.0 bits (136), Expect = 4e-07
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = -3
Query: 266 QFIFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLA 87
+ ++SDVW P+ ++S +GF +YVHF D S Y+ I+ +H K E F+ F+ +VEN
Sbjct: 43 ELVYSDVWGPSHYVSREGFRYYVHFTDVFSKYTWIYFMHNKSETAHHFIHFKSMVENQFG 102
Query: 86 AKL 78
K+
Sbjct: 103 HKI 105
>JAT44458.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 184
Score = 52.0 bits (123), Expect(2) = 4e-07
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -3
Query: 260 IFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLAAK 81
++SDVW PA +S GF +YV F D S Y+ +F L +K +V D+F +FQ VE
Sbjct: 79 VYSDVWGPAPVLSHAGFQYYVIFVDAYSKYTWLFLLKRKSDVYDIFCRFQTHVERYFGRP 138
Query: 80 L-IFRLD*RGEFQ 45
+ F D GE+Q
Sbjct: 139 IRQFHSDWGGEYQ 151
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 364 SSSDRP*ICDACQKGKSNKLSLFAFSFISESPLNLFF 254
S S +C AC K KS+KL ++ +PL+L +
Sbjct: 44 SPSSSSSVCSACMKAKSHKLPFTLSPSVASAPLDLVY 80
>GAU51268.1 hypothetical protein TSUD_412550 [Trifolium subterraneum]
Length = 1387
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = -3
Query: 260 IFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLAAK 81
I SDVW PA +S GF +YVHF D S ++ IF L QK + I F++F+ L EN K
Sbjct: 495 IHSDVWGPAPILSPSGFKYYVHFIDDFSRFTWIFPLKQKSDTIHAFIQFKNLAENQFNKK 554
Query: 80 L-IFRLD*RGEFQ 45
+ I + D GE++
Sbjct: 555 IKIIQCDGGGEYK 567
>AAF02855.1 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 54.3 bits (129), Expect(2) = 5e-07
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = -3
Query: 260 IFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLAAK 81
I D+W P+ S+ GF +YV F DH S ++ + L K + FV FQ LVEN L K
Sbjct: 519 IHCDLWGPSPTSSVQGFRYYVVFIDHYSRFTWFYPLKLKSDFFSTFVMFQKLVENQLGHK 578
Query: 80 L-IFRLD*RGEFQDCPF 33
+ IF+ D GEF F
Sbjct: 579 IKIFQCDGGGEFISSQF 595
Score = 26.6 bits (57), Expect(2) = 5e-07
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 343 ICDACQKGKSNKLSLFAFSFISESPL 266
+C+AC GKS +L +F + PL
Sbjct: 491 VCEACHLGKSTRLPFMLSTFNASRPL 516
>AAK51235.1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 51.2 bits (121), Expect(2) = 6e-07
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = -3
Query: 260 IFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLAAK 81
I D+W P+ +S GF +YV F D S YS + L K + VFV FQ LVEN K
Sbjct: 518 IHCDLWGPSPVVSKQGFKYYVVFVDDYSRYSWFYPLKAKSDFFAVFVAFQNLVENQFNTK 577
Query: 80 L-IFRLD*RGEF 48
+ +F+ D GEF
Sbjct: 578 IKVFQSDGGGEF 589
Score = 29.3 bits (64), Expect(2) = 6e-07
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 385 SPNMIVFSSSDRP*ICDACQKGKSNKLSLFA 293
S I F+ S +C+ CQ GKS+KL F+
Sbjct: 476 SSKEISFNKSRMSPVCEPCQMGKSSKLQFFS 506
>JAT59554.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 977
Score = 52.8 bits (125), Expect(2) = 6e-07
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -3
Query: 260 IFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLAAK 81
I+SDVW PA +S +GF +YV F D + Y+ +F L +K EV D F FQ VE K
Sbjct: 86 IYSDVWGPAPVLSHEGFQYYVIFVDAFTKYTWLFLLKRKSEVSDTFRHFQTHVERYFGRK 145
Query: 80 L-IFRLD*RGEFQ 45
+ F D GE+Q
Sbjct: 146 IRQFHSDWGGEYQ 158
Score = 27.7 bits (60), Expect(2) = 6e-07
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 343 ICDACQKGKSNKLSLFAFSFISESPLNLFF 254
+C AC + KS+KL + ++ +PL+L +
Sbjct: 58 VCSACMQAKSHKLPFASSPPVASAPLDLIY 87
>KYP46820.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 219
Score = 56.2 bits (134), Expect = 6e-07
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = -3
Query: 275 KSSQFIFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVEN 96
K + ++SDVW P SI+G +YV F DH S Y ++ L KL+V +F+ F+ LVEN
Sbjct: 104 KPLELVYSDVWGPTSIQSINGHFYYVIFIDHFSKYVLLYPLKHKLDVYTIFLVFKSLVEN 163
Query: 95 LLAAKL 78
L K+
Sbjct: 164 QLNTKI 169
>KYP59913.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 326
Score = 56.2 bits (134), Expect(2) = 7e-07
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = -3
Query: 266 QFIFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVENLLA 87
+ ++SDVW P+ ++S +GF +YVHF D S Y+ I+ +H K E + F+ +VEN
Sbjct: 230 ELVYSDVWGPSHYVSREGFRYYVHFTDAYSKYTWIYFMHNKSETAHHVIHFKTMVENQFG 289
Query: 86 AKL-IFRLD*RGEF 48
K+ +F+ D EF
Sbjct: 290 NKIKMFQSDGGKEF 303
Score = 24.3 bits (51), Expect(2) = 7e-07
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 343 ICDACQKGKSNKLSLFAFSF-ISESPLNLFF 254
+C +C GKS+ L F++SF + SPL L +
Sbjct: 204 VCKSCCIGKSHTLP-FSYSFTVYNSPLELVY 233
>KYP46819.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 224
Score = 56.2 bits (134), Expect = 7e-07
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = -3
Query: 275 KSSQFIFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVEN 96
K + ++SDVW P SI+G +YV F DH S Y ++ L KL+V +F+ F+ LVEN
Sbjct: 109 KPLELVYSDVWGPTSIQSINGHFYYVIFIDHFSKYVLLYPLKHKLDVYTIFLVFKSLVEN 168
Query: 95 LLAAKL 78
L K+
Sbjct: 169 QLNTKI 174
>KYP46792.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 224
Score = 56.2 bits (134), Expect = 7e-07
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = -3
Query: 275 KSSQFIFSDVWCPALFISIDGF*FYVHFFDHCS*YSKIFHLHQKLEVIDVFVKFQLLVEN 96
K + ++SDVW P SI+G +YV F DH S Y ++ L KL+V +F+ F+ LVEN
Sbjct: 109 KPLELVYSDVWGPTSIQSINGHFYYVIFIDHFSKYVLLYPLKHKLDVYTIFLVFKSLVEN 168
Query: 95 LLAAKL 78
L K+
Sbjct: 169 QLNTKI 174