BLASTX nr result
ID: Magnolia22_contig00028862
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Magnolia22_contig00028862
(879 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_008808980.1 PREDICTED: polyadenylation and cleavage factor ho... 296 2e-89
XP_010931817.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a... 295 5e-89
XP_008784554.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a... 293 3e-88
XP_010275998.1 PREDICTED: polyadenylation and cleavage factor ho... 290 7e-87
XP_016492698.1 PREDICTED: polyadenylation and cleavage factor ho... 275 1e-82
XP_019257117.1 PREDICTED: polyadenylation and cleavage factor ho... 275 5e-82
XP_009793882.1 PREDICTED: uncharacterized protein LOC104240702 [... 275 5e-82
XP_018816225.1 PREDICTED: polyadenylation and cleavage factor ho... 255 1e-81
XP_009601448.1 PREDICTED: polyadenylation and cleavage factor ho... 274 2e-81
XP_009601447.1 PREDICTED: polyadenylation and cleavage factor ho... 274 2e-81
XP_016432499.1 PREDICTED: LOW QUALITY PROTEIN: polyadenylation a... 274 2e-81
XP_009601446.1 PREDICTED: polyadenylation and cleavage factor ho... 274 2e-81
EOY28631.1 PCF11P-similar protein 4, putative isoform 2 [Theobro... 268 3e-81
KVH97396.1 CID domain-containing protein, partial [Cynara cardun... 272 1e-80
KVH97398.1 CID domain-containing protein [Cynara cardunculus var... 271 2e-80
XP_018857118.1 PREDICTED: polyadenylation and cleavage factor ho... 251 2e-80
KJB67157.1 hypothetical protein B456_010G178200 [Gossypium raimo... 268 3e-80
XP_012091393.1 PREDICTED: polyadenylation and cleavage factor ho... 269 2e-79
EOY28630.1 PCF11P-similar protein 4, putative isoform 1 [Theobro... 268 2e-79
XP_012450329.1 PREDICTED: polyadenylation and cleavage factor ho... 268 3e-79
>XP_008808980.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Phoenix dactylifera] XP_008808981.1
PREDICTED: polyadenylation and cleavage factor homolog
4-like isoform X1 [Phoenix dactylifera] XP_008808982.1
PREDICTED: polyadenylation and cleavage factor homolog
4-like isoform X1 [Phoenix dactylifera] XP_008808983.1
PREDICTED: polyadenylation and cleavage factor homolog
4-like isoform X1 [Phoenix dactylifera]
Length = 1065
Score = 296 bits (758), Expect = 2e-89
Identities = 155/281 (55%), Positives = 193/281 (68%), Gaps = 14/281 (4%)
Frame = -1
Query: 801 MEESRL---RQNPRNP-----------AFLSDLSSQKPSPPILERFRSLLKQIQDQIRPT 664
MEE RL R+NPR P A L + +P P IL+RFR++L++ ++++R
Sbjct: 1 MEEERLHSSRENPRFPPGDRPPRLAAAAEQQPLPASRPPPSILDRFRAMLREREEELREA 60
Query: 663 SSDGDDDDTLPRPEMDEIVRLYEDVLSELTYNSKPIITDLTIIAGEQKEYGEGIADAICR 484
+ + P EIVRLY+++LSELT+NSKPIITDL+IIAG+ ++ EGIA+AIC
Sbjct: 61 TGEDPPPSPPPPHTAGEIVRLYKELLSELTFNSKPIITDLSIIAGQHSQFAEGIANAICA 120
Query: 483 RIVEVPAEQKLPSLYLLDSIVKNIGRNYVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFG 304
RI+EVP +QKLPSLYLLDSIVKNIGR+YVRYFAARL +VFCEAY QV P+QYPSMRHLFG
Sbjct: 121 RILEVPVDQKLPSLYLLDSIVKNIGRDYVRYFAARLPKVFCEAYNQVHPTQYPSMRHLFG 180
Query: 303 TWSTVFPPSILRKIESELQFSSAVSHQTSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQ 124
TW VFP S+LRKIE ELQFS + Q+S ++ P+HGIHVNPKYLEAR+Q
Sbjct: 181 TWFQVFPLSVLRKIEDELQFSPTENKQSSGMSSTRHSESPSSRPSHGIHVNPKYLEARQQ 240
Query: 123 FEHSTVMHETDPSDNARIADFGGKGMERNASSSPKGWSGAS 1
+H T+M D D DF G+ ME AS KGW GAS
Sbjct: 241 LKHPTLMCAADGHDKVHTTDFDGERMEGRASEGSKGWQGAS 281
>XP_010931817.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4 [Elaeis guineensis]
Length = 1070
Score = 295 bits (756), Expect = 5e-89
Identities = 156/280 (55%), Positives = 191/280 (68%), Gaps = 13/280 (4%)
Frame = -1
Query: 801 MEESRLRQNPRNPAFLSDLSSQKPSP-------------PILERFRSLLKQIQDQIRPTS 661
ME+ L + NP F +P+P IL+RFR++L++ +++R
Sbjct: 1 MEDEGLSSSRGNPRFPQGDRPPRPAPVAEPQPPPGRSLPTILDRFRAMLRERDEELR--- 57
Query: 660 SDGDDDDTLPRPEMDEIVRLYEDVLSELTYNSKPIITDLTIIAGEQKEYGEGIADAICRR 481
+ +D P P EIVRLYE++LSELT+NSKPIIT+LTIIAG+ + EGIADAIC R
Sbjct: 58 -EAIGEDPPPPPTAGEIVRLYEELLSELTFNSKPIITELTIIAGQHPQLAEGIADAICAR 116
Query: 480 IVEVPAEQKLPSLYLLDSIVKNIGRNYVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFGT 301
++EVP +QKLPSLYLLDSIVKNIGR YVRYFAARL +VFCEAY QV PSQYP+MRHLFGT
Sbjct: 117 VLEVPLDQKLPSLYLLDSIVKNIGREYVRYFAARLPKVFCEAYNQVHPSQYPAMRHLFGT 176
Query: 300 WSTVFPPSILRKIESELQFSSAVSHQTSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQF 121
WS VFP S+LRKIE ELQFS + + Q+S T+ P+HGIHVNPKYLEAR F
Sbjct: 177 WSQVFPLSVLRKIEDELQFSPSKNSQSSGITSMRQSESPSPRPSHGIHVNPKYLEARHLF 236
Query: 120 EHSTVMHETDPSDNARIADFGGKGMERNASSSPKGWSGAS 1
+HST M + D A + DF G+ ME NAS KGWSG S
Sbjct: 237 KHSTTMRAVESHDKAHMTDFDGEQMEGNASEGLKGWSGGS 276
>XP_008784554.2 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4-like [Phoenix dactylifera]
Length = 1063
Score = 293 bits (750), Expect = 3e-88
Identities = 153/280 (54%), Positives = 193/280 (68%), Gaps = 13/280 (4%)
Frame = -1
Query: 801 MEESRLRQNPRNPAFLSDLSSQKPSP-------------PILERFRSLLKQIQDQIRPTS 661
ME+ L + NP F + +P PIL+RFR++L++ ++++R +
Sbjct: 1 MEDEGLSSSRGNPRFPQGDRPPRTAPAAEPQPATGRLLQPILDRFRAMLREREEELREAT 60
Query: 660 SDGDDDDTLPRPEMDEIVRLYEDVLSELTYNSKPIITDLTIIAGEQKEYGEGIADAICRR 481
+ DT P EIVRLYE++LSELT+NSKPIIT+LTIIAG+ ++ EGIADAIC R
Sbjct: 61 GE----DTPRPPTAGEIVRLYEELLSELTFNSKPIITELTIIAGQHLQFAEGIADAICVR 116
Query: 480 IVEVPAEQKLPSLYLLDSIVKNIGRNYVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFGT 301
++EVP +QKLPSLYLLDSIVKNIGR Y+RYFAARL +VFCEAY QV P+QYP+MRHLFGT
Sbjct: 117 VLEVPLDQKLPSLYLLDSIVKNIGREYMRYFAARLPKVFCEAYNQVHPNQYPAMRHLFGT 176
Query: 300 WSTVFPPSILRKIESELQFSSAVSHQTSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQF 121
W VFP S+LRKIE ELQFS + S+Q+S T+ P+HGIHVNPKYLEAR F
Sbjct: 177 WFQVFPLSVLRKIEDELQFSPSKSNQSSGITSMRRSESPSPRPSHGIHVNPKYLEARHLF 236
Query: 120 EHSTVMHETDPSDNARIADFGGKGMERNASSSPKGWSGAS 1
+HST + + D + DF G+ ME NAS KGWSGAS
Sbjct: 237 KHSTAVRAVESHDKVHMTDFNGEQMEENASEGLKGWSGAS 276
>XP_010275998.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Nelumbo nucifera]
Length = 1071
Score = 290 bits (741), Expect = 7e-87
Identities = 158/257 (61%), Positives = 188/257 (73%), Gaps = 22/257 (8%)
Frame = -1
Query: 801 MEESRL---RQNPRNPAFLSDLSS------------------QKPSPPILERFRSLLKQI 685
MEE R R++PRN FLS+ S QKP PPILE+FR+LLK+
Sbjct: 1 MEEERFVSARESPRNLGFLSERGSSTSGGSINSSKAVPNDLAQKPPPPILEKFRALLKER 60
Query: 684 QDQIRPTSSDGDDDDTLPRPEMDEIVRLYEDVLSELTYNSKPIITDLTIIAGEQKEYGEG 505
++++R + DDD +P P +EIVRLYE VLSELT+NSKPIIT+LTIIAGEQ+E+GEG
Sbjct: 61 EEEMRVS-----DDDDVPPPSTEEIVRLYEVVLSELTFNSKPIITELTIIAGEQREHGEG 115
Query: 504 IADAICRRIVEVPAEQKLPSLYLLDSIVKNIGRNYVRYFAARLAEVFCEAYKQVDPSQYP 325
IADAIC RI+EVP EQKLPSLYLLDSIVKNIGR Y RYFA+RL EVFCEAY+QV P+ YP
Sbjct: 116 IADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYARYFASRLPEVFCEAYRQVQPNLYP 175
Query: 324 SMRHLFGTWSTVFPPSILRKIESELQFSSAVSHQTSSWTA-XXXXXXXXXXPAHGIHVNP 148
+MRHLFGTWSTVFP +LRKIE ELQFS A + Q++S TA P+HGIHVNP
Sbjct: 176 AMRHLFGTWSTVFPTKVLRKIEVELQFSPASNQQSTSLTAPRSSEESPPPRPSHGIHVNP 235
Query: 147 KYLEARRQFEHSTVMHE 97
KYLE RRQ EHS+ ++
Sbjct: 236 KYLE-RRQIEHSSFAND 251
>XP_016492698.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
[Nicotiana tabacum]
Length = 900
Score = 275 bits (704), Expect = 1e-82
Identities = 142/225 (63%), Positives = 174/225 (77%), Gaps = 3/225 (1%)
Frame = -1
Query: 771 RNPAFLSDLSSQKPSPPILERFRSLLKQIQDQIRPTSS---DGDDDDTLPRPEMDEIVRL 601
+N A ++ PSP I+ERFR+ LK+ ++++R +S D DDD + P MDEIVRL
Sbjct: 14 QNDAVVAAPPKPLPSPSIIERFRAALKEREEELRASSMPVIDDDDDVIVLPPTMDEIVRL 73
Query: 600 YEDVLSELTYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQKLPSLYLLDSIV 421
YE LS+LT+NSKP+ITDLTIIAGEQ+E+G+GIADAIC RI+EVP EQKLPSLYLLDSIV
Sbjct: 74 YELFLSDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLYLLDSIV 133
Query: 420 KNIGRNYVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPSILRKIESELQFS 241
KNIGR+YVR+F+A L EVFCEAY+QV PS +P+MRHLFGTWSTVFP +LRKIE+ LQFS
Sbjct: 134 KNIGRDYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFS 193
Query: 240 SAVSHQTSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHSTV 106
+ + Q+S T+ P HGIHVNPKYLEARRQ HST+
Sbjct: 194 QSGAQQSSGLTS--SRASESPRPTHGIHVNPKYLEARRQLGHSTI 236
>XP_019257117.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Nicotiana
attenuata] OIS96062.1 polyadenylation and cleavage
factor -like 4 [Nicotiana attenuata]
Length = 982
Score = 275 bits (704), Expect = 5e-82
Identities = 142/225 (63%), Positives = 174/225 (77%), Gaps = 3/225 (1%)
Frame = -1
Query: 771 RNPAFLSDLSSQKPSPPILERFRSLLKQIQDQIRPTSS---DGDDDDTLPRPEMDEIVRL 601
+N A ++ PSP I+ERFR+ LK+ ++++R +S D DDD + P MDEIVRL
Sbjct: 14 QNDAVVAAPPKPLPSPSIIERFRAALKEREEELRASSMPVIDDDDDVIVLPPTMDEIVRL 73
Query: 600 YEDVLSELTYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQKLPSLYLLDSIV 421
YE LS+LT+NSKP+ITDLTIIAGEQ+E+G+GIADAIC RI+EVP EQKLPSLYLLDSIV
Sbjct: 74 YELFLSDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLYLLDSIV 133
Query: 420 KNIGRNYVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPSILRKIESELQFS 241
KNIGR+YVR+F+A L EVFCEAY+QV PS +P+MRHLFGTWSTVFP +LRKIE+ LQFS
Sbjct: 134 KNIGRDYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFS 193
Query: 240 SAVSHQTSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHSTV 106
+ + Q+S T+ P HGIHVNPKYLEARRQ HST+
Sbjct: 194 QSGAQQSSGLTS--SRASESPRPTHGIHVNPKYLEARRQLGHSTI 236
>XP_009793882.1 PREDICTED: uncharacterized protein LOC104240702 [Nicotiana
sylvestris]
Length = 982
Score = 275 bits (704), Expect = 5e-82
Identities = 142/225 (63%), Positives = 174/225 (77%), Gaps = 3/225 (1%)
Frame = -1
Query: 771 RNPAFLSDLSSQKPSPPILERFRSLLKQIQDQIRPTSS---DGDDDDTLPRPEMDEIVRL 601
+N A ++ PSP I+ERFR+ LK+ ++++R +S D DDD + P MDEIVRL
Sbjct: 14 QNDAVVAAPPKPLPSPSIIERFRAALKEREEELRASSMPVIDDDDDVIVLPPTMDEIVRL 73
Query: 600 YEDVLSELTYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQKLPSLYLLDSIV 421
YE LS+LT+NSKP+ITDLTIIAGEQ+E+G+GIADAIC RI+EVP EQKLPSLYLLDSIV
Sbjct: 74 YELFLSDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLYLLDSIV 133
Query: 420 KNIGRNYVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPSILRKIESELQFS 241
KNIGR+YVR+F+A L EVFCEAY+QV PS +P+MRHLFGTWSTVFP +LRKIE+ LQFS
Sbjct: 134 KNIGRDYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFS 193
Query: 240 SAVSHQTSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHSTV 106
+ + Q+S T+ P HGIHVNPKYLEARRQ HST+
Sbjct: 194 QSGAQQSSGLTS--SRASESPRPTHGIHVNPKYLEARRQLGHSTI 236
>XP_018816225.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like
[Juglans regia]
Length = 245
Score = 255 bits (651), Expect = 1e-81
Identities = 139/239 (58%), Positives = 172/239 (71%), Gaps = 5/239 (2%)
Frame = -1
Query: 807 IAMEESRLRQNPRNPA-----FLSDLSSQKPSPPILERFRSLLKQIQDQIRPTSSDGDDD 643
+A S R+NPRN A ++L QK + IL+RF++LL+Q ++R ++ +D
Sbjct: 1 MASTGSENRENPRNLATATKVVATELPPQKLTLSILDRFKALLRQRDHELRGSA----ED 56
Query: 642 DTLPRPEMDEIVRLYEDVLSELTYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPA 463
DT+ P +EIV Y+ +LSELT NSKPIITDLTIIAG+QKE+G+GIA+ IC RI+E P
Sbjct: 57 DTVTPPSAEEIVHFYDLLLSELTLNSKPIITDLTIIAGDQKEHGKGIAEGICARILEAPV 116
Query: 462 EQKLPSLYLLDSIVKNIGRNYVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFP 283
EQKLPSLYLLDSIVKNIGR YV YF+ L EVFCEAY+QV P Q+ +MRHLFGTWS VFP
Sbjct: 117 EQKLPSLYLLDSIVKNIGREYVTYFSYCLPEVFCEAYRQVQPDQHNAMRHLFGTWSAVFP 176
Query: 282 PSILRKIESELQFSSAVSHQTSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHSTV 106
PS+LRKIE++LQFS + +HQ+S T P HGIHVNPKYL RQ EHSTV
Sbjct: 177 PSVLRKIEAKLQFSPSANHQSSGLT--PSRASESPRPTHGIHVNPKYL---RQLEHSTV 230
>XP_009601448.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X3
[Nicotiana tomentosiformis]
Length = 980
Score = 274 bits (700), Expect = 2e-81
Identities = 142/225 (63%), Positives = 172/225 (76%), Gaps = 3/225 (1%)
Frame = -1
Query: 771 RNPAFLSDLSSQKPSPPILERFRSLLKQIQDQIRPTSS---DGDDDDTLPRPEMDEIVRL 601
+N A ++ PSP I+ERFR+ LK+ ++++R +S D DDD + P MDEIVRL
Sbjct: 14 QNDAVVAAPPKPLPSPSIIERFRAALKEREEELRASSMPVVDDDDDVIVLPPTMDEIVRL 73
Query: 600 YEDVLSELTYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQKLPSLYLLDSIV 421
YE LS+LT+NSKP+ITDLTIIAGEQ+E+G+GIADAIC RI+EVP EQKLPSLYLLDSIV
Sbjct: 74 YELFLSDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLYLLDSIV 133
Query: 420 KNIGRNYVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPSILRKIESELQFS 241
KNIGR+YVR+F+A L EVFCEAY+QV PS +P+MRHLFGTWSTVFP +LRKIE+ LQFS
Sbjct: 134 KNIGRDYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFS 193
Query: 240 SAVSHQTSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHSTV 106
Q+S T+ P HGIHVNPKYLEARRQ HST+
Sbjct: 194 QPGPQQSSGLTS--SRASESPRPTHGIHVNPKYLEARRQLGHSTI 236
>XP_009601447.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Nicotiana tomentosiformis]
Length = 985
Score = 274 bits (700), Expect = 2e-81
Identities = 142/225 (63%), Positives = 172/225 (76%), Gaps = 3/225 (1%)
Frame = -1
Query: 771 RNPAFLSDLSSQKPSPPILERFRSLLKQIQDQIRPTSS---DGDDDDTLPRPEMDEIVRL 601
+N A ++ PSP I+ERFR+ LK+ ++++R +S D DDD + P MDEIVRL
Sbjct: 14 QNDAVVAAPPKPLPSPSIIERFRAALKEREEELRASSMPVVDDDDDVIVLPPTMDEIVRL 73
Query: 600 YEDVLSELTYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQKLPSLYLLDSIV 421
YE LS+LT+NSKP+ITDLTIIAGEQ+E+G+GIADAIC RI+EVP EQKLPSLYLLDSIV
Sbjct: 74 YELFLSDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLYLLDSIV 133
Query: 420 KNIGRNYVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPSILRKIESELQFS 241
KNIGR+YVR+F+A L EVFCEAY+QV PS +P+MRHLFGTWSTVFP +LRKIE+ LQFS
Sbjct: 134 KNIGRDYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFS 193
Query: 240 SAVSHQTSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHSTV 106
Q+S T+ P HGIHVNPKYLEARRQ HST+
Sbjct: 194 QPGPQQSSGLTS--SRASESPRPTHGIHVNPKYLEARRQLGHSTI 236
>XP_016432499.1 PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4-like [Nicotiana tabacum]
Length = 986
Score = 274 bits (700), Expect = 2e-81
Identities = 142/225 (63%), Positives = 172/225 (76%), Gaps = 3/225 (1%)
Frame = -1
Query: 771 RNPAFLSDLSSQKPSPPILERFRSLLKQIQDQIRPTSS---DGDDDDTLPRPEMDEIVRL 601
+N A ++ PSP I+ERFR+ LK+ ++++R +S D DDD + P MDEIVRL
Sbjct: 14 QNDAVVAAPPKPLPSPSIIERFRAALKEREEELRASSMPVVDDDDDVIVLPPTMDEIVRL 73
Query: 600 YEDVLSELTYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQKLPSLYLLDSIV 421
YE LS+LT+NSKP+ITDLTIIAGEQ+E+G+GIADAIC RI+EVP EQKLPSLYLLDSIV
Sbjct: 74 YELFLSDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLYLLDSIV 133
Query: 420 KNIGRNYVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPSILRKIESELQFS 241
KNIGR+YVR+F+A L EVFCEAY+QV PS +P+MRHLFGTWSTVFP +LRKIE+ LQFS
Sbjct: 134 KNIGRDYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFS 193
Query: 240 SAVSHQTSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHSTV 106
Q+S T+ P HGIHVNPKYLEARRQ HST+
Sbjct: 194 QPGPQQSSGLTS--SRASESPRPTHGIHVNPKYLEARRQLGHSTI 236
>XP_009601446.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Nicotiana tomentosiformis]
Length = 989
Score = 274 bits (700), Expect = 2e-81
Identities = 142/225 (63%), Positives = 172/225 (76%), Gaps = 3/225 (1%)
Frame = -1
Query: 771 RNPAFLSDLSSQKPSPPILERFRSLLKQIQDQIRPTSS---DGDDDDTLPRPEMDEIVRL 601
+N A ++ PSP I+ERFR+ LK+ ++++R +S D DDD + P MDEIVRL
Sbjct: 14 QNDAVVAAPPKPLPSPSIIERFRAALKEREEELRASSMPVVDDDDDVIVLPPTMDEIVRL 73
Query: 600 YEDVLSELTYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQKLPSLYLLDSIV 421
YE LS+LT+NSKP+ITDLTIIAGEQ+E+G+GIADAIC RI+EVP EQKLPSLYLLDSIV
Sbjct: 74 YELFLSDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLYLLDSIV 133
Query: 420 KNIGRNYVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPSILRKIESELQFS 241
KNIGR+YVR+F+A L EVFCEAY+QV PS +P+MRHLFGTWSTVFP +LRKIE+ LQFS
Sbjct: 134 KNIGRDYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIETRLQFS 193
Query: 240 SAVSHQTSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHSTV 106
Q+S T+ P HGIHVNPKYLEARRQ HST+
Sbjct: 194 QPGPQQSSGLTS--SRASESPRPTHGIHVNPKYLEARRQLGHSTI 236
>EOY28631.1 PCF11P-similar protein 4, putative isoform 2 [Theobroma cacao]
Length = 733
Score = 268 bits (686), Expect = 3e-81
Identities = 136/211 (64%), Positives = 163/211 (77%)
Frame = -1
Query: 756 LSDLSSQKPSPPILERFRSLLKQIQDQIRPTSSDGDDDDTLPRPEMDEIVRLYEDVLSEL 577
+S+ +QK P I ERF++LLKQ +D +R + D DD+ P EIV+LYE VLSEL
Sbjct: 1 MSNELAQKQQPSISERFKALLKQREDDLRVSGGDDGDDEVAATPSRGEIVQLYEAVLSEL 60
Query: 576 TYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQKLPSLYLLDSIVKNIGRNYV 397
T+NSKPIITDLTIIAGEQ+E+GEGIADAIC RI+EVP EQKLPSLYLLDSIVKNIGR YV
Sbjct: 61 TFNSKPIITDLTIIAGEQREHGEGIADAICARILEVPVEQKLPSLYLLDSIVKNIGREYV 120
Query: 396 RYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPSILRKIESELQFSSAVSHQTS 217
R+F++RL EVFCEAY+QV+P+ YP+MRHLFGTWSTVFPPS+LRKIE +LQFS + + Q+
Sbjct: 121 RHFSSRLPEVFCEAYRQVNPNLYPAMRHLFGTWSTVFPPSVLRKIEIQLQFSQSANQQSP 180
Query: 216 SWTAXXXXXXXXXXPAHGIHVNPKYLEARRQ 124
T+ P HGIHVNPKYL Q
Sbjct: 181 GVTS--LRSSESPRPTHGIHVNPKYLRQLEQ 209
>KVH97396.1 CID domain-containing protein, partial [Cynara cardunculus var.
scolymus]
Length = 1024
Score = 272 bits (695), Expect = 1e-80
Identities = 146/252 (57%), Positives = 182/252 (72%), Gaps = 3/252 (1%)
Frame = -1
Query: 756 LSDLSSQKPSPPILERFRSLLKQIQDQIRPTSSDGDDDDTLPRPEMDEIVRLYEDVLSEL 577
L++ +QK PI +RF+ LLK+ ++ IR SS D+ +P P +EIV LYE VLSEL
Sbjct: 85 LANNCNQKSLTPICDRFKGLLKEREEDIR-VSSGRHDEIEIPSPSSEEIVELYEIVLSEL 143
Query: 576 TYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQKLPSLYLLDSIVKNIGRNYV 397
T NSKP+ITDLTIIAGEQ+E+G GIADAIC RI+EVP EQKLPSLYLLDSIVKNIGR+YV
Sbjct: 144 TINSKPLITDLTIIAGEQREHGGGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGRDYV 203
Query: 396 RYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPSILRKIESELQFSSAVSHQTS 217
R+F+ARL EV+C AY+Q+ P+ +PSMRHLFGTWSTVFP S+L KIE++LQFS + SHQ+S
Sbjct: 204 RHFSARLPEVYCLAYRQIHPNMHPSMRHLFGTWSTVFPSSVLCKIEAQLQFSPSASHQSS 263
Query: 216 SWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHSTV---MHETDPSDNARIADFGGKGM 46
A PAHGIHVNPKYLEARRQFE+ST + + + + I + G
Sbjct: 264 GLKA-----SESPRPAHGIHVNPKYLEARRQFENSTTDSKIQQARATSTSEILEQPSSGF 318
Query: 45 ERNASSSPKGWS 10
+ S S + S
Sbjct: 319 DEYESDSREALS 330
>KVH97398.1 CID domain-containing protein [Cynara cardunculus var. scolymus]
Length = 954
Score = 271 bits (692), Expect = 2e-80
Identities = 145/218 (66%), Positives = 168/218 (77%)
Frame = -1
Query: 762 AFLSDLSSQKPSPPILERFRSLLKQIQDQIRPTSSDGDDDDTLPRPEMDEIVRLYEDVLS 583
A L+ ++QK PIL+RF+ LLKQ +++IR SS GDDD P +EIV LYEDVLS
Sbjct: 23 AALASNNNQKSLTPILDRFKVLLKQREEEIR-VSSGGDDDIESPVLSTEEIVELYEDVLS 81
Query: 582 ELTYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQKLPSLYLLDSIVKNIGRN 403
EL NSKPIITDLTIIAGEQ+ +G GIADAIC RI+EVP EQKLPSLYLLDSIVKNIGR
Sbjct: 82 ELIINSKPIITDLTIIAGEQRGHGAGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGRE 141
Query: 402 YVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPSILRKIESELQFSSAVSHQ 223
YVR+F+ARL EV+C AY+QV PS +PSMRHLFGTW+TVFP S+LRKIE++LQFS S+Q
Sbjct: 142 YVRHFSARLPEVYCAAYRQVHPSLHPSMRHLFGTWATVFPSSVLRKIETQLQFSPPSSYQ 201
Query: 222 TSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHST 109
+S PAHGIHVNPKYLEARRQ E ST
Sbjct: 202 SSG-----LKDSESPRPAHGIHVNPKYLEARRQLESST 234
>XP_018857118.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like,
partial [Juglans regia]
Length = 232
Score = 251 bits (642), Expect = 2e-80
Identities = 138/239 (57%), Positives = 171/239 (71%), Gaps = 5/239 (2%)
Frame = -1
Query: 807 IAMEESRLRQNPRNPA-----FLSDLSSQKPSPPILERFRSLLKQIQDQIRPTSSDGDDD 643
+A S R+N RN A ++L QK + IL+RF++LL+Q ++R ++ +D
Sbjct: 1 MASTGSENRENRRNLATATKVVATELPPQKLTLSILDRFKALLRQRDHELRGSA----ED 56
Query: 642 DTLPRPEMDEIVRLYEDVLSELTYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPA 463
DT+ P +EIV Y+ +LSELT NSKPIITDLTIIAG+QKE+G+GIA+ IC RI+E P
Sbjct: 57 DTVTPPSAEEIVHFYDLLLSELTLNSKPIITDLTIIAGDQKEHGKGIAEGICARILEAPV 116
Query: 462 EQKLPSLYLLDSIVKNIGRNYVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFP 283
EQKLPSLYLLDSIVKNIGR YV YF+ L EVFCEAY+QV P Q+ +MRHLFGTWS VFP
Sbjct: 117 EQKLPSLYLLDSIVKNIGREYVTYFSYCLPEVFCEAYRQVQPDQHNAMRHLFGTWSAVFP 176
Query: 282 PSILRKIESELQFSSAVSHQTSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHSTV 106
PS+LRKIE++LQFS + +HQ+S T P HGIHVNPKYL RQ EHSTV
Sbjct: 177 PSVLRKIEAKLQFSPSANHQSSGLT--PSRASESPRPTHGIHVNPKYL---RQLEHSTV 230
>KJB67157.1 hypothetical protein B456_010G178200 [Gossypium raimondii]
Length = 831
Score = 268 bits (685), Expect = 3e-80
Identities = 141/216 (65%), Positives = 168/216 (77%)
Frame = -1
Query: 756 LSDLSSQKPSPPILERFRSLLKQIQDQIRPTSSDGDDDDTLPRPEMDEIVRLYEDVLSEL 577
+S+ +QK P I ERF++LLKQ +D++R + DDD P E EIV+LYE VLSEL
Sbjct: 3 ISNELAQKQLPSISERFKALLKQREDELRVSGGVADDDGATPTTE--EIVQLYEVVLSEL 60
Query: 576 TYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQKLPSLYLLDSIVKNIGRNYV 397
T+NSKPIITDLTIIAGEQ+E+GEGIADAIC RI+EVP EQKLPSLYLLDSIVKNIGR YV
Sbjct: 61 TFNSKPIITDLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYV 120
Query: 396 RYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPSILRKIESELQFSSAVSHQTS 217
RYF++RL EVFCEAY+QV+P+ +P+MRHLFGTWSTVFPPS+LRKIE +LQFS + Q+S
Sbjct: 121 RYFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSS 180
Query: 216 SWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHST 109
T+ P HGIHVNPKYL RQFE +
Sbjct: 181 GVTS--LQSSESPRPTHGIHVNPKYL---RQFEQQS 211
>XP_012091393.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Jatropha
curcas] KDP20781.1 hypothetical protein JCGZ_21252
[Jatropha curcas]
Length = 1029
Score = 269 bits (687), Expect = 2e-79
Identities = 146/236 (61%), Positives = 176/236 (74%), Gaps = 5/236 (2%)
Frame = -1
Query: 801 MEESRLRQNPRNPA-----FLSDLSSQKPSPPILERFRSLLKQIQDQIRPTSSDGDDDDT 637
ME ++ QNPR P S+ SQK +P +L+RFR+LLKQ +++ R ++ D DD
Sbjct: 1 MESGKVLQNPRFPTSSAKTMASNELSQKTTPSLLDRFRALLKQREEEARVSAED--DDAA 58
Query: 636 LPRPEMDEIVRLYEDVLSELTYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQ 457
P +EIV+LYE VL ELT+NSKPIITDLTIIAGE +E GEGIADAIC RI+EVP EQ
Sbjct: 59 GPTLSAEEIVQLYELVLDELTFNSKPIITDLTIIAGELREQGEGIADAICARIIEVPVEQ 118
Query: 456 KLPSLYLLDSIVKNIGRNYVRYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPS 277
KLPSLYLLDSIVKNIGR+YVRYF+ RL EVFCEAY+QV P+ YPSMRHLFGTWS+VFPPS
Sbjct: 119 KLPSLYLLDSIVKNIGRDYVRYFSTRLPEVFCEAYRQVHPNLYPSMRHLFGTWSSVFPPS 178
Query: 276 ILRKIESELQFSSAVSHQTSSWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHST 109
+L KIE++LQFS V+ Q+S ++ P HGIHVNPKYL RQ E+ST
Sbjct: 179 VLGKIETQLQFSPQVNSQSSGLSS--LKASDSPRPTHGIHVNPKYL---RQLENST 229
>EOY28630.1 PCF11P-similar protein 4, putative isoform 1 [Theobroma cacao]
Length = 1004
Score = 268 bits (686), Expect = 2e-79
Identities = 136/211 (64%), Positives = 163/211 (77%)
Frame = -1
Query: 756 LSDLSSQKPSPPILERFRSLLKQIQDQIRPTSSDGDDDDTLPRPEMDEIVRLYEDVLSEL 577
+S+ +QK P I ERF++LLKQ +D +R + D DD+ P EIV+LYE VLSEL
Sbjct: 1 MSNELAQKQQPSISERFKALLKQREDDLRVSGGDDGDDEVAATPSRGEIVQLYEAVLSEL 60
Query: 576 TYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQKLPSLYLLDSIVKNIGRNYV 397
T+NSKPIITDLTIIAGEQ+E+GEGIADAIC RI+EVP EQKLPSLYLLDSIVKNIGR YV
Sbjct: 61 TFNSKPIITDLTIIAGEQREHGEGIADAICARILEVPVEQKLPSLYLLDSIVKNIGREYV 120
Query: 396 RYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPSILRKIESELQFSSAVSHQTS 217
R+F++RL EVFCEAY+QV+P+ YP+MRHLFGTWSTVFPPS+LRKIE +LQFS + + Q+
Sbjct: 121 RHFSSRLPEVFCEAYRQVNPNLYPAMRHLFGTWSTVFPPSVLRKIEIQLQFSQSANQQSP 180
Query: 216 SWTAXXXXXXXXXXPAHGIHVNPKYLEARRQ 124
T+ P HGIHVNPKYL Q
Sbjct: 181 GVTS--LRSSESPRPTHGIHVNPKYLRQLEQ 209
>XP_012450329.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Gossypium raimondii]
Length = 1001
Score = 268 bits (685), Expect = 3e-79
Identities = 141/216 (65%), Positives = 168/216 (77%)
Frame = -1
Query: 756 LSDLSSQKPSPPILERFRSLLKQIQDQIRPTSSDGDDDDTLPRPEMDEIVRLYEDVLSEL 577
+S+ +QK P I ERF++LLKQ +D++R + DDD P E EIV+LYE VLSEL
Sbjct: 3 ISNELAQKQLPSISERFKALLKQREDELRVSGGVADDDGATPTTE--EIVQLYEVVLSEL 60
Query: 576 TYNSKPIITDLTIIAGEQKEYGEGIADAICRRIVEVPAEQKLPSLYLLDSIVKNIGRNYV 397
T+NSKPIITDLTIIAGEQ+E+GEGIADAIC RI+EVP EQKLPSLYLLDSIVKNIGR YV
Sbjct: 61 TFNSKPIITDLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYV 120
Query: 396 RYFAARLAEVFCEAYKQVDPSQYPSMRHLFGTWSTVFPPSILRKIESELQFSSAVSHQTS 217
RYF++RL EVFCEAY+QV+P+ +P+MRHLFGTWSTVFPPS+LRKIE +LQFS + Q+S
Sbjct: 121 RYFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSS 180
Query: 216 SWTAXXXXXXXXXXPAHGIHVNPKYLEARRQFEHST 109
T+ P HGIHVNPKYL RQFE +
Sbjct: 181 GVTS--LQSSESPRPTHGIHVNPKYL---RQFEQQS 211