BLASTX nr result
ID: Magnolia22_contig00028781
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Magnolia22_contig00028781
(534 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_007474568.1 RNA polymerase alpha subunit (chloroplast) [Magno... 112 3e-27
YP_009261512.1 RNA polymerase alpha subunit (chloroplast) [Lirio... 112 3e-27
YP_008993896.1 RNA polymerase alpha subunit (chloroplast) [Magno... 112 3e-27
YP_008993724.1 RNA polymerase alpha subunit (chloroplast) [Magno... 112 3e-27
YP_008993466.1 RNA polymerase alpha subunit (chloroplast) [Magno... 112 3e-27
YP_008993380.1 RNA polymerase alpha subunit (chloroplast) [Magno... 112 3e-27
YP_008993294.1 RNA polymerase alpha subunit (chloroplast) [Magno... 112 3e-27
AFP92340.1 RNA polymerase alpha subunit (chloroplast) [Magnolia ... 112 3e-27
YP_008993810.1 RNA polymerase alpha subunit (chloroplast) [Magno... 112 3e-27
YP_007474402.1 RNA polymerase alpha subunit (chloroplast) [Magno... 112 3e-27
AEX98283.1 RNA polymerase alpha subunit (chloroplast) [Magnolia ... 112 3e-27
YP_006576146.1 RpoA (chloroplast) [Magnolia denudata] YP_0089935... 112 3e-27
YP_740234.1 RNA polymerase alpha subunit [Liriodendron tulipifer... 112 3e-27
YP_004769746.1 RNA polymerase alpha subunit [Magnolia kwangsiens... 111 8e-27
YP_008993638.1 RNA polymerase alpha subunit (chloroplast) [Magno... 109 3e-26
YP_008993208.1 RNA polymerase alpha subunit (chloroplast) [Magno... 109 8e-26
NP_862785.1 RNA polymerase alpha subunit [Calycanthus floridus v... 106 1e-24
ALT16939.1 RNA polymerase alpha subunit (chloroplast) [Endiandra... 106 1e-24
YP_009123284.1 RNA polymerase alpha subunit (chloroplast) [Chlor... 105 3e-24
YP_001294302.1 RNA polymerase alpha subunit [Illicium oligandrum... 103 7e-24
>YP_007474568.1 RNA polymerase alpha subunit (chloroplast) [Magnolia grandiflora]
AEX98951.1 RNA polymerase alpha subunit (chloroplast)
[Magnolia grandiflora] AEX99119.1 RNA polymerase alpha
subunit (chloroplast) [Magnolia grandiflora]
Length = 337
Score = 112 bits (280), Expect(2) = 3e-27
Identities = 55/66 (83%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 37.0 bits (84), Expect(2) = 3e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLGSHLYGTRDAS 107
>YP_009261512.1 RNA polymerase alpha subunit (chloroplast) [Liriodendron chinense]
ANN44762.1 RNA polymerase alpha subunit (chloroplast)
[Liriodendron chinense]
Length = 337
Score = 112 bits (280), Expect(2) = 3e-27
Identities = 55/66 (83%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 36.6 bits (83), Expect(2) = 3e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>YP_008993896.1 RNA polymerase alpha subunit (chloroplast) [Magnolia sprengeri]
AFP93201.1 RNA polymerase alpha subunit (chloroplast)
[Magnolia sprengeri]
Length = 337
Score = 112 bits (280), Expect(2) = 3e-27
Identities = 55/66 (83%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 36.6 bits (83), Expect(2) = 3e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>YP_008993724.1 RNA polymerase alpha subunit (chloroplast) [Magnolia salicifolia]
AFP93029.1 RNA polymerase alpha subunit (chloroplast)
[Magnolia salicifolia]
Length = 337
Score = 112 bits (280), Expect(2) = 3e-27
Identities = 55/66 (83%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 36.6 bits (83), Expect(2) = 3e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>YP_008993466.1 RNA polymerase alpha subunit (chloroplast) [Magnolia kobus]
AFP92771.1 RNA polymerase alpha subunit (chloroplast)
[Magnolia kobus]
Length = 337
Score = 112 bits (280), Expect(2) = 3e-27
Identities = 55/66 (83%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 36.6 bits (83), Expect(2) = 3e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>YP_008993380.1 RNA polymerase alpha subunit (chloroplast) [Magnolia pyramidata]
AFP92685.1 RNA polymerase alpha subunit (chloroplast)
[Magnolia pyramidata]
Length = 337
Score = 112 bits (280), Expect(2) = 3e-27
Identities = 55/66 (83%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 36.6 bits (83), Expect(2) = 3e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>YP_008993294.1 RNA polymerase alpha subunit (chloroplast) [Magnolia dealbata]
AFP92513.1 RNA polymerase alpha subunit (chloroplast)
[Magnolia dealbata]
Length = 337
Score = 112 bits (280), Expect(2) = 3e-27
Identities = 55/66 (83%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 36.6 bits (83), Expect(2) = 3e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>AFP92340.1 RNA polymerase alpha subunit (chloroplast) [Magnolia acuminata var.
acuminata]
Length = 337
Score = 112 bits (280), Expect(2) = 3e-27
Identities = 55/66 (83%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 36.6 bits (83), Expect(2) = 3e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>YP_008993810.1 RNA polymerase alpha subunit (chloroplast) [Magnolia sinica]
YP_009048319.1 DNA-directed RNA polymerase alpha chain
(chloroplast) [Magnolia yunnanensis] AFP93115.1 RNA
polymerase alpha subunit (chloroplast) [Magnolia sinica]
AHF72112.1 DNA-directed RNA polymerase alpha chain
(chloroplast) [Magnolia yunnanensis]
Length = 337
Score = 112 bits (280), Expect(2) = 3e-27
Identities = 55/66 (83%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 36.6 bits (83), Expect(2) = 3e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>YP_007474402.1 RNA polymerase alpha subunit (chloroplast) [Magnolia officinalis]
YP_007474484.1 RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
YP_009026913.1 RNA polymerase alpha subunit (plastid)
[Magnolia tripetala] AEX98534.1 RNA polymerase alpha
subunit (chloroplast) [Magnolia officinalis] AEX98616.1
RNA polymerase alpha subunit (chloroplast) [Magnolia
officinalis subsp. biloba] AEX98700.1 RNA polymerase
alpha subunit (chloroplast) [Magnolia officinalis subsp.
biloba] AEX98784.1 RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
AHW51989.1 RNA polymerase alpha subunit (plastid)
[Magnolia tripetala]
Length = 337
Score = 112 bits (280), Expect(2) = 3e-27
Identities = 55/66 (83%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 36.6 bits (83), Expect(2) = 3e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>AEX98283.1 RNA polymerase alpha subunit (chloroplast) [Magnolia liliiflora]
Length = 337
Score = 112 bits (280), Expect(2) = 3e-27
Identities = 55/66 (83%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 36.6 bits (83), Expect(2) = 3e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>YP_006576146.1 RpoA (chloroplast) [Magnolia denudata] YP_008993552.1 RNA
polymerase alpha subunit (chloroplast) [Magnolia
liliifera] AEM65249.1 RpoA (chloroplast) [Magnolia
denudata] AEX98366.1 RNA polymerase alpha subunit
(chloroplast) [Magnolia denudata] AFP92599.1 RNA
polymerase alpha subunit (chloroplast) [Magnolia
denudata] AFP92857.1 RNA polymerase alpha subunit
(chloroplast) [Magnolia liliifera]
Length = 337
Score = 112 bits (280), Expect(2) = 3e-27
Identities = 55/66 (83%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 36.6 bits (83), Expect(2) = 3e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>YP_740234.1 RNA polymerase alpha subunit [Liriodendron tulipifera] Q0G9I7.1
RecName: Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
ABI32541.1 RNA polymerase alpha subunit (chloroplast)
[Liriodendron tulipifera]
Length = 337
Score = 112 bits (280), Expect(2) = 3e-27
Identities = 55/66 (83%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 36.6 bits (83), Expect(2) = 3e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>YP_004769746.1 RNA polymerase alpha subunit [Magnolia kwangsiensis] ADL39088.1 RNA
polymerase alpha subunit (chloroplast) [Magnolia
kwangsiensis]
Length = 337
Score = 111 bits (277), Expect(2) = 8e-27
Identities = 54/66 (81%), Positives = 56/66 (84%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQI+RD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIDRDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 36.6 bits (83), Expect(2) = 8e-27
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>YP_008993638.1 RNA polymerase alpha subunit (chloroplast) [Magnolia odora]
AFP92943.1 RNA polymerase alpha subunit (chloroplast)
[Magnolia odora]
Length = 337
Score = 109 bits (272), Expect(2) = 3e-26
Identities = 54/66 (81%), Positives = 55/66 (83%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
YPID
Sbjct: 168 ESYPID 173
Score = 36.6 bits (83), Expect(2) = 3e-26
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT DAS
Sbjct: 87 ILMNLKEIVLRSHLYGTRDAS 107
>YP_008993208.1 RNA polymerase alpha subunit (chloroplast) [Magnolia cathcartii]
AFP92427.1 RNA polymerase alpha subunit (chloroplast)
[Magnolia cathcartii]
Length = 337
Score = 109 bits (272), Expect(2) = 8e-26
Identities = 54/66 (81%), Positives = 55/66 (83%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DIIPPP VEIVDT QHIASLT PIDLCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIIPPPSVEIVDTTQHIASLTEPIDLCIELQIERDRGYRMKTPNNYQD 167
Query: 294 GGYPID 277
YPID
Sbjct: 168 ESYPID 173
Score = 35.0 bits (79), Expect(2) = 8e-26
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDA 474
ILMNLKEIV SHLYGT DA
Sbjct: 87 ILMNLKEIVLRSHLYGTRDA 106
>NP_862785.1 RNA polymerase alpha subunit [Calycanthus floridus var. glaucus]
Q7YJU6.1 RecName: Full=DNA-directed RNA polymerase
subunit alpha; Short=PEP; AltName: Full=Plastid-encoded
RNA polymerase subunit alpha; Short=RNA polymerase
subunit alpha CAD28752.1 RNA polymerase alpha subunit
(chloroplast) [Calycanthus floridus var. glaucus]
Length = 340
Score = 106 bits (264), Expect(2) = 1e-24
Identities = 52/66 (78%), Positives = 55/66 (83%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGP+Y TA DII PP VEIVDT QHIASLT PI+LCIELQIERD G+ MK PNNYQD
Sbjct: 108 ICVRGPKYVTAQDIISPPSVEIVDTTQHIASLTEPINLCIELQIERDRGYRMKAPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 34.3 bits (77), Expect(2) = 1e-24
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV S+LYGT DAS
Sbjct: 87 ILMNLKEIVLKSNLYGTRDAS 107
>ALT16939.1 RNA polymerase alpha subunit (chloroplast) [Endiandra globosa]
ALT17024.1 RNA polymerase alpha subunit (chloroplast)
[Endiandra discolor]
Length = 339
Score = 106 bits (265), Expect(2) = 1e-24
Identities = 51/66 (77%), Positives = 55/66 (83%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGP+ TA DII PP VEIVDT QH+ASLT PI+LCIELQIERDCG+ MK PNNYQD
Sbjct: 108 ICVRGPKNVTAQDIISPPSVEIVDTTQHVASLTEPINLCIELQIERDCGYRMKSPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 33.9 bits (76), Expect(2) = 1e-24
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV S+LYGT DAS
Sbjct: 87 ILMNLKEIVLRSNLYGTRDAS 107
>YP_009123284.1 RNA polymerase alpha subunit (chloroplast) [Chloranthus japonicus]
AJM70003.1 RNA polymerase alpha subunit (chloroplast)
[Chloranthus japonicus]
Length = 334
Score = 105 bits (263), Expect = 3e-24
Identities = 52/66 (78%), Positives = 54/66 (81%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DII PP VEIVDT QHIASLT PIDLCIELQI+RD G+ MK PN YQD
Sbjct: 108 ICVRGPRYVTAQDIISPPSVEIVDTTQHIASLTEPIDLCIELQIQRDRGYRMKTPNKYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
>YP_001294302.1 RNA polymerase alpha subunit [Illicium oligandrum] A6MMX6.1
RecName: Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
ABQ52550.1 RNA polymerase alpha subunit (chloroplast)
[Illicium oligandrum]
Length = 331
Score = 103 bits (258), Expect(2) = 7e-24
Identities = 51/66 (77%), Positives = 55/66 (83%)
Frame = -1
Query: 474 IHVRGPRYTTALDIIPPPFVEIVDTPQHIASLTGPIDLCIELQIERDCGHCMKIPNNYQD 295
I VRGPRY TA DII PP V+IVDT Q+IASLT PIDLCIELQIERD G+ +K PNNYQD
Sbjct: 108 ICVRGPRYVTAQDIISPPSVKIVDTTQYIASLTEPIDLCIELQIERDRGYRIKTPNNYQD 167
Query: 294 GGYPID 277
G YPID
Sbjct: 168 GSYPID 173
Score = 33.9 bits (76), Expect(2) = 7e-24
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = -2
Query: 533 ILMNLKEIVSSSHLYGTCDAS 471
ILMNLKEIV SHLYGT AS
Sbjct: 87 ILMNLKEIVFRSHLYGTRGAS 107