BLASTX nr result

ID: Magnolia22_contig00027897 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00027897
         (576 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_009362169.1 PREDICTED: pentatricopeptide repeat-containing pr...    58   2e-06
XP_010275031.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   4e-06
XP_017190625.1 PREDICTED: uncharacterized protein LOC108174406 [...    55   4e-06
XP_017192853.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   9e-06

>XP_009362169.1 PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic [Pyrus x bretschneideri]
          Length = 916

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = -1

Query: 234 MFLANMQMGTFNLERNGFFLFDARSNPTFVNGFSVSPKPVFGIALNKNTARRIQIFNVRA 55
           M +AN Q G  N +RNG F  D       ++GFS+  +P+FGI LN+   +R ++F ++ 
Sbjct: 4   MVMANAQPGVSNFQRNGVFATDCCPKSLPLSGFSIFRRPIFGIGLNEKNVKRNRVFGIKF 63

Query: 54  PNCR-IVCALSRKESE 10
            N R ++ A+S++ SE
Sbjct: 64  VNSRTVISAVSKEGSE 79


>XP_010275031.1 PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic [Nelumbo nucifera]
          Length = 1042

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 29/76 (38%), Positives = 46/76 (60%)
 Frame = -1

Query: 240 IEMFLANMQMGTFNLERNGFFLFDARSNPTFVNGFSVSPKPVFGIALNKNTARRIQIFNV 61
           +E+ + +  MG  +LE +G F  +   NP+   GF VS KP+  +ALN     RI++F++
Sbjct: 1   MEVIVTSGFMGVSSLEGSGLFFLNYFQNPSSSLGFPVSRKPISKVALNTKKVSRIELFSL 60

Query: 60  RAPNCRIVCALSRKES 13
           RA +CRI+  LS  E+
Sbjct: 61  RASSCRIMNVLSEGEA 76


>XP_017190625.1 PREDICTED: uncharacterized protein LOC108174406 [Malus domestica]
          Length = 172

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = -1

Query: 240 IEMFLANMQMGTFNLERNGFFLFDARSNPTFVNGFSVSPKPVFGIALNKNTARRIQIFNV 61
           +E+ +AN Q+G  N + NG F+ +    P   +GFS+  +PVFG+ L +   R+ ++F +
Sbjct: 2   VELVMANAQLGVSNFQSNGIFVTNCSPEPFPSSGFSIFRRPVFGVRLYEKNVRKNRVFGI 61

Query: 60  RAPNCR-IVCALSRKESE 10
              N R  + A+S++ SE
Sbjct: 62  NFVNSRTFISAVSKEGSE 79


>XP_017192853.1 PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic-like [Malus domestica]
          Length = 916

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = -1

Query: 234 MFLANMQMGTFNLERNGFFLFDARSNPTFVNGFSVSPKPVFGIALNKNTARRIQIFNVRA 55
           M +AN Q G  N +RNG F  +       ++GFS+  +P+FGI LN+   +R ++F ++ 
Sbjct: 4   MVMANAQPGVSNFQRNGVFATNCCPKSLPLSGFSIFRRPIFGIGLNEKNVKRNRVFGIKF 63

Query: 54  PNCR-IVCALSRKESE 10
            N R ++ A+S++ SE
Sbjct: 64  VNSRTVISAVSKEGSE 79


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