BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00026823
         (468 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010273664.1 PREDICTED: RNA polymerase II transcription factor...   158   4e-45
XP_010273663.1 PREDICTED: RNA polymerase II transcription factor...   158   4e-45
XP_006434174.1 hypothetical protein CICLE_v100020021mg, partial ...   145   2e-41
KDO80686.1 hypothetical protein CISIN_1g022374mg [Citrus sinensis]    145   8e-41
KDO80685.1 hypothetical protein CISIN_1g022374mg [Citrus sinensis]    145   6e-40
KDO80684.1 hypothetical protein CISIN_1g022374mg [Citrus sinensis]    145   7e-40
ONK65471.1 uncharacterized protein A4U43_C07F37450 [Asparagus of...   140   9e-40
KHG29334.1 General transcription factor IIH subunit 3 [Gossypium...   143   2e-39
XP_006472763.1 PREDICTED: general transcription factor IIH subun...   143   2e-39
XP_006472762.1 PREDICTED: general transcription factor IIH subun...   143   3e-39
KJB59106.1 hypothetical protein B456_009G245300 [Gossypium raimo...   142   3e-39
XP_017607639.1 PREDICTED: RNA polymerase II transcription factor...   143   3e-39
XP_016709622.1 PREDICTED: RNA polymerase II transcription factor...   143   3e-39
XP_008802071.1 PREDICTED: RNA polymerase II transcription factor...   146   4e-39
XP_008802070.1 PREDICTED: RNA polymerase II transcription factor...   146   5e-39
XP_018817109.1 PREDICTED: RNA polymerase II transcription factor...   141   5e-39
XP_008802068.1 PREDICTED: RNA polymerase II transcription factor...   146   5e-39
KJB59110.1 hypothetical protein B456_009G245300 [Gossypium raimo...   142   9e-39
XP_016687038.1 PREDICTED: RNA polymerase II transcription factor...   142   1e-38
XP_012445877.1 PREDICTED: general transcription factor IIH subun...   142   1e-38

>XP_010273664.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X2 [Nelumbo nucifera]
          Length = 298

 Score =  158 bits (400), Expect = 4e-45
 Identities = 80/120 (66%), Positives = 94/120 (78%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA   SKLYSDDVSLLVV LDTNPF W G   N  T SLSF +FL H+  FLNSI+LL+Q
Sbjct: 1   MASITSKLYSDDVSLLVVLLDTNPFLWSG--ENTTTNSLSFPKFLTHVFSFLNSILLLNQ 58

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG+NSCDYIYDSSS P T  + E+  MP++CS +LQNLE+FL RD+++ KDE
Sbjct: 59  LNQVVVIATGLNSCDYIYDSSSSPTTVESLENGRMPALCSKLLQNLEEFLARDQELNKDE 118


>XP_010273663.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X1 [Nelumbo nucifera]
          Length = 303

 Score =  158 bits (400), Expect = 4e-45
 Identities = 80/120 (66%), Positives = 94/120 (78%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA   SKLYSDDVSLLVV LDTNPF W G   N  T SLSF +FL H+  FLNSI+LL+Q
Sbjct: 1   MASITSKLYSDDVSLLVVLLDTNPFLWSG--ENTTTNSLSFPKFLTHVFSFLNSILLLNQ 58

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG+NSCDYIYDSSS P T  + E+  MP++CS +LQNLE+FL RD+++ KDE
Sbjct: 59  LNQVVVIATGLNSCDYIYDSSSSPTTVESLENGRMPALCSKLLQNLEEFLARDQELNKDE 118


>XP_006434174.1 hypothetical protein CICLE_v100020021mg, partial [Citrus
           clementina] ESR47414.1 hypothetical protein
           CICLE_v100020021mg, partial [Citrus clementina]
          Length = 174

 Score =  145 bits (365), Expect = 2e-41
 Identities = 75/120 (62%), Positives = 91/120 (75%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLYSDDVSL+VV LDTNPFFW  +S       LSFS+FL H+L FLN+I+ L+Q
Sbjct: 1   MASAPSKLYSDDVSLVVVLLDTNPFFWSSSS-------LSFSQFLTHVLAFLNAILTLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG NSCDY+YDSSS    S    +  MPS+C+ +LQNLE+F+ +D Q+GK E
Sbjct: 54  LNQVVVIATGYNSCDYVYDSSSTGNQSVG--NGRMPSLCATLLQNLEEFMNKDEQLGKQE 111


>KDO80686.1 hypothetical protein CISIN_1g022374mg [Citrus sinensis]
          Length = 219

 Score =  145 bits (365), Expect = 8e-41
 Identities = 75/120 (62%), Positives = 91/120 (75%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLYSDDVSL+VV LDTNPFFW  +S       LSFS+FL H+L FLN+I+ L+Q
Sbjct: 1   MASAPSKLYSDDVSLVVVLLDTNPFFWSSSS-------LSFSQFLTHVLAFLNAILTLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG NSCDY+YDSSS    S    +  MPS+C+ +LQNLE+F+ +D Q+GK E
Sbjct: 54  LNQVVVIATGYNSCDYVYDSSSTGNQSVG--NGRMPSLCATLLQNLEEFMNKDEQLGKQE 111


>KDO80685.1 hypothetical protein CISIN_1g022374mg [Citrus sinensis]
          Length = 293

 Score =  145 bits (365), Expect = 6e-40
 Identities = 75/120 (62%), Positives = 91/120 (75%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLYSDDVSL+VV LDTNPFFW  +S       LSFS+FL H+L FLN+I+ L+Q
Sbjct: 1   MASAPSKLYSDDVSLVVVLLDTNPFFWSSSS-------LSFSQFLTHVLAFLNAILTLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG NSCDY+YDSSS    S    +  MPS+C+ +LQNLE+F+ +D Q+GK E
Sbjct: 54  LNQVVVIATGYNSCDYVYDSSSTGNQSVG--NGRMPSLCATLLQNLEEFMNKDEQLGKQE 111


>KDO80684.1 hypothetical protein CISIN_1g022374mg [Citrus sinensis]
          Length = 298

 Score =  145 bits (365), Expect = 7e-40
 Identities = 75/120 (62%), Positives = 91/120 (75%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLYSDDVSL+VV LDTNPFFW  +S       LSFS+FL H+L FLN+I+ L+Q
Sbjct: 1   MASAPSKLYSDDVSLVVVLLDTNPFFWSSSS-------LSFSQFLTHVLAFLNAILTLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG NSCDY+YDSSS    S    +  MPS+C+ +LQNLE+F+ +D Q+GK E
Sbjct: 54  LNQVVVIATGYNSCDYVYDSSSTGNQSVG--NGRMPSLCATLLQNLEEFMNKDEQLGKQE 111


>ONK65471.1 uncharacterized protein A4U43_C07F37450 [Asparagus officinalis]
          Length = 146

 Score =  140 bits (352), Expect = 9e-40
 Identities = 72/121 (59%), Positives = 94/121 (77%), Gaps = 1/121 (0%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MAPAPSKLYSDDVSL+VV LD NPFFWG      +T S+SF++FLNH++PFLNS++L++Q
Sbjct: 1   MAPAPSKLYSDDVSLVVVLLDINPFFWG------STNSISFAKFLNHVIPFLNSLLLINQ 54

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRD-RQIGKD 62
           +NQVV+IATGVNSC YIYDS    +    SE  N+ ++ S VLQ LE+F+  D ++IGK+
Sbjct: 55  VNQVVLIATGVNSCGYIYDSEGGQL---GSEGGNVDAIFSEVLQKLEEFVAEDQKKIGKE 111

Query: 61  E 59
           E
Sbjct: 112 E 112


>KHG29334.1 General transcription factor IIH subunit 3 [Gossypium arboreum]
          Length = 276

 Score =  143 bits (360), Expect = 2e-39
 Identities = 73/120 (60%), Positives = 94/120 (78%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLY+DDVSL+VV LDTNPFFW  +S       LSFS+FL+H+L FLN+I+ L+Q
Sbjct: 1   MASAPSKLYADDVSLVVVLLDTNPFFWSSSS-------LSFSQFLSHVLAFLNAILTLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG NSCDY++DSSS    + + E+  MP +CS++LQ LE+FLI+D Q+ K+E
Sbjct: 54  LNQVVVIATGYNSCDYVFDSSSD--LNRSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEE 111


>XP_006472763.1 PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Citrus sinensis]
          Length = 293

 Score =  143 bits (361), Expect = 2e-39
 Identities = 74/120 (61%), Positives = 90/120 (75%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLYSDDVSL+VV LDTNPFFW  +S       LSFS+FL H+L F N+I+ L+Q
Sbjct: 1   MASAPSKLYSDDVSLVVVLLDTNPFFWSSSS-------LSFSQFLTHVLAFFNAILTLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG NSCDY+YDSSS    S    +  MPS+C+ +LQNLE+F+ +D Q+GK E
Sbjct: 54  LNQVVVIATGYNSCDYVYDSSSTGNQSVG--NGRMPSLCATLLQNLEEFMNKDEQLGKQE 111


>XP_006472762.1 PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Citrus sinensis]
          Length = 298

 Score =  143 bits (361), Expect = 3e-39
 Identities = 74/120 (61%), Positives = 90/120 (75%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLYSDDVSL+VV LDTNPFFW  +S       LSFS+FL H+L F N+I+ L+Q
Sbjct: 1   MASAPSKLYSDDVSLVVVLLDTNPFFWSSSS-------LSFSQFLTHVLAFFNAILTLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG NSCDY+YDSSS    S    +  MPS+C+ +LQNLE+F+ +D Q+GK E
Sbjct: 54  LNQVVVIATGYNSCDYVYDSSSTGNQSVG--NGRMPSLCATLLQNLEEFMNKDEQLGKQE 111


>KJB59106.1 hypothetical protein B456_009G245300 [Gossypium raimondii]
          Length = 248

 Score =  142 bits (357), Expect = 3e-39
 Identities = 73/120 (60%), Positives = 93/120 (77%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLY+DDVSL+VV LDTNPFFW  +S       LSFS+FL+H+L FLN+I+ L+Q
Sbjct: 1   MASAPSKLYADDVSLVVVLLDTNPFFWSSSS-------LSFSQFLSHVLAFLNAILTLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG NSCDY++DSSS    + + E+  MP +CS++LQ LE+FLI D Q+ K+E
Sbjct: 54  LNQVVVIATGYNSCDYVFDSSSD--LNRSFENGRMPVMCSSLLQKLEEFLITDEQLSKEE 111


>XP_017607639.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           [Gossypium arboreum] XP_017607640.1 PREDICTED: RNA
           polymerase II transcription factor B subunit 4
           [Gossypium arboreum]
          Length = 296

 Score =  143 bits (360), Expect = 3e-39
 Identities = 73/120 (60%), Positives = 94/120 (78%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLY+DDVSL+VV LDTNPFFW  +S       LSFS+FL+H+L FLN+I+ L+Q
Sbjct: 1   MASAPSKLYADDVSLVVVLLDTNPFFWSSSS-------LSFSQFLSHVLAFLNAILTLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG NSCDY++DSSS    + + E+  MP +CS++LQ LE+FLI+D Q+ K+E
Sbjct: 54  LNQVVVIATGYNSCDYVFDSSSD--LNRSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEE 111


>XP_016709622.1 PREDICTED: RNA polymerase II transcription factor B subunit 4-like
           [Gossypium hirsutum] XP_016709623.1 PREDICTED: RNA
           polymerase II transcription factor B subunit 4-like
           [Gossypium hirsutum] XP_016709624.1 PREDICTED: RNA
           polymerase II transcription factor B subunit 4-like
           [Gossypium hirsutum] XP_016709625.1 PREDICTED: RNA
           polymerase II transcription factor B subunit 4-like
           [Gossypium hirsutum]
          Length = 296

 Score =  143 bits (360), Expect = 3e-39
 Identities = 73/120 (60%), Positives = 94/120 (78%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLY+DDVSL+VV LDTNPFFW  +S       LSFS+FL+H+L FLN+I+ L+Q
Sbjct: 1   MASAPSKLYADDVSLVVVLLDTNPFFWSSSS-------LSFSQFLSHVLAFLNAILTLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG NSCDY++DSSS    + + E+  MP +CS++LQ LE+FLI+D Q+ K+E
Sbjct: 54  LNQVVVIATGYNSCDYVFDSSSD--LNRSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEE 111


>XP_008802071.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X3 [Phoenix dactylifera] XP_008802073.1
           PREDICTED: RNA polymerase II transcription factor B
           subunit 4 isoform X3 [Phoenix dactylifera]
          Length = 459

 Score =  146 bits (369), Expect = 4e-39
 Identities = 73/124 (58%), Positives = 97/124 (78%), Gaps = 6/124 (4%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFW----GGASSNPNTPS--LSFSRFLNHLLPFLNS 257
           M  APSKLYSDDVSL+VV LDTNPFFW    GG +++P+ P+  L F++FLNH++PFLNS
Sbjct: 1   MNSAPSKLYSDDVSLVVVLLDTNPFFWAAGAGGGNTSPHHPAATLPFAKFLNHVIPFLNS 60

Query: 256 IILLHQLNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDR 77
           ++LL+QLNQVV+IATGVNSC YIYDS+        S   N+P+VCS +L+ LE+F+ +DR
Sbjct: 61  VLLLNQLNQVVLIATGVNSCGYIYDSA-----GGGSHGGNVPAVCSEILRRLEEFVAKDR 115

Query: 76  QIGK 65
           ++GK
Sbjct: 116 RLGK 119


>XP_008802070.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X2 [Phoenix dactylifera]
          Length = 470

 Score =  146 bits (369), Expect = 5e-39
 Identities = 73/124 (58%), Positives = 97/124 (78%), Gaps = 6/124 (4%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFW----GGASSNPNTPS--LSFSRFLNHLLPFLNS 257
           M  APSKLYSDDVSL+VV LDTNPFFW    GG +++P+ P+  L F++FLNH++PFLNS
Sbjct: 1   MNSAPSKLYSDDVSLVVVLLDTNPFFWAAGAGGGNTSPHHPAATLPFAKFLNHVIPFLNS 60

Query: 256 IILLHQLNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDR 77
           ++LL+QLNQVV+IATGVNSC YIYDS+        S   N+P+VCS +L+ LE+F+ +DR
Sbjct: 61  VLLLNQLNQVVLIATGVNSCGYIYDSA-----GGGSHGGNVPAVCSEILRRLEEFVAKDR 115

Query: 76  QIGK 65
           ++GK
Sbjct: 116 RLGK 119


>XP_018817109.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X2 [Juglans regia]
          Length = 258

 Score =  141 bits (356), Expect = 5e-39
 Identities = 74/120 (61%), Positives = 91/120 (75%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLY+DDVSLLVV LDTNPFFW   S       L FS+FL+H+L FLNSI+LL+Q
Sbjct: 1   MASAPSKLYADDVSLLVVLLDTNPFFWSSFS-------LPFSKFLSHVLSFLNSILLLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
            NQVVVIATG NSCDYIYDSSS   T A  ES  MP++CS +L+ L++F+ RD+ +G+ +
Sbjct: 54  FNQVVVIATGCNSCDYIYDSSSATNTDA--ESGRMPALCSDLLRKLDEFVTRDQHLGEKD 111


>XP_008802068.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X1 [Phoenix dactylifera] XP_008802069.1
           PREDICTED: RNA polymerase II transcription factor B
           subunit 4 isoform X1 [Phoenix dactylifera]
          Length = 475

 Score =  146 bits (369), Expect = 5e-39
 Identities = 73/124 (58%), Positives = 97/124 (78%), Gaps = 6/124 (4%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFW----GGASSNPNTPS--LSFSRFLNHLLPFLNS 257
           M  APSKLYSDDVSL+VV LDTNPFFW    GG +++P+ P+  L F++FLNH++PFLNS
Sbjct: 1   MNSAPSKLYSDDVSLVVVLLDTNPFFWAAGAGGGNTSPHHPAATLPFAKFLNHVIPFLNS 60

Query: 256 IILLHQLNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDR 77
           ++LL+QLNQVV+IATGVNSC YIYDS+        S   N+P+VCS +L+ LE+F+ +DR
Sbjct: 61  VLLLNQLNQVVLIATGVNSCGYIYDSA-----GGGSHGGNVPAVCSEILRRLEEFVAKDR 115

Query: 76  QIGK 65
           ++GK
Sbjct: 116 RLGK 119


>KJB59110.1 hypothetical protein B456_009G245300 [Gossypium raimondii]
          Length = 291

 Score =  142 bits (357), Expect = 9e-39
 Identities = 73/120 (60%), Positives = 93/120 (77%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLY+DDVSL+VV LDTNPFFW  +S       LSFS+FL+H+L FLN+I+ L+Q
Sbjct: 1   MASAPSKLYADDVSLVVVLLDTNPFFWSSSS-------LSFSQFLSHVLAFLNAILTLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG NSCDY++DSSS    + + E+  MP +CS++LQ LE+FLI D Q+ K+E
Sbjct: 54  LNQVVVIATGYNSCDYVFDSSSD--LNRSFENGRMPVMCSSLLQKLEEFLITDEQLSKEE 111


>XP_016687038.1 PREDICTED: RNA polymerase II transcription factor B subunit 4-like
           [Gossypium hirsutum]
          Length = 296

 Score =  142 bits (357), Expect = 1e-38
 Identities = 73/120 (60%), Positives = 93/120 (77%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLY+DDVSL+VV LDTNPFFW  +S       LSFS+FL+H+L FLN+I+ L+Q
Sbjct: 1   MASAPSKLYADDVSLVVVLLDTNPFFWSSSS-------LSFSQFLSHVLAFLNAILTLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG NSCDY++DSSS    + + E+  MP +CS++LQ LE+FLI D Q+ K+E
Sbjct: 54  LNQVVVIATGYNSCDYVFDSSSD--LNRSFENGRMPVMCSSLLQKLEEFLITDEQLSKEE 111


>XP_012445877.1 PREDICTED: general transcription factor IIH subunit 3 [Gossypium
           raimondii] XP_012445878.1 PREDICTED: general
           transcription factor IIH subunit 3 [Gossypium raimondii]
           KJB59104.1 hypothetical protein B456_009G245300
           [Gossypium raimondii] KJB59105.1 hypothetical protein
           B456_009G245300 [Gossypium raimondii]
          Length = 296

 Score =  142 bits (357), Expect = 1e-38
 Identities = 73/120 (60%), Positives = 93/120 (77%)
 Frame = -3

Query: 418 MAPAPSKLYSDDVSLLVVALDTNPFFWGGASSNPNTPSLSFSRFLNHLLPFLNSIILLHQ 239
           MA APSKLY+DDVSL+VV LDTNPFFW  +S       LSFS+FL+H+L FLN+I+ L+Q
Sbjct: 1   MASAPSKLYADDVSLVVVLLDTNPFFWSSSS-------LSFSQFLSHVLAFLNAILTLNQ 53

Query: 238 LNQVVVIATGVNSCDYIYDSSSPPMTSAASESRNMPSVCSAVLQNLEDFLIRDRQIGKDE 59
           LNQVVVIATG NSCDY++DSSS    + + E+  MP +CS++LQ LE+FLI D Q+ K+E
Sbjct: 54  LNQVVVIATGYNSCDYVFDSSSD--LNRSFENGRMPVMCSSLLQKLEEFLITDEQLSKEE 111