BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00025479
         (1017 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_009333242.1 RdRp [Beihai charybdis crab virus 1] APG77582.1 R...   133   1e-30
YP_002455904.1 128 kDa [Cactus mild mottle virus] ABX57120.1 rep...   131   5e-30
YP_002455905.1 replicase [Cactus mild mottle virus]                   131   5e-30
APD13853.1 replication small protein [Plumeria mosaic virus]          129   3e-29
APD13852.1 replicase large protein [Plumeria mosaic virus]            129   3e-29
YP_762618.1 putative replicase [Streptocarpus flower break virus...   122   7e-27
YP_762617.1 putative replicase [Streptocarpus flower break virus...   122   7e-27
NP_620042.1 1a protein [Olive latent virus 2] Q83943.1 RecName: ...   120   2e-26
YP_009345041.1 hypothetical protein [Xinzhou nematode virus 1] A...   120   4e-26
ALU84939.1 128kDa replicase [Hibiscus latent Fort Pierce virus]       119   8e-26
YP_009094324.1 128 kDa replicase [Hibiscus latent Fort Pierce vi...   119   8e-26
ALU84940.1 188 kDa polymerase [Hibiscus latent Fort Pierce virus]     119   8e-26
YP_009094908.1 187 kDa polymerase [Hibiscus latent Fort Pierce v...   119   8e-26
YP_004465359.1 unnamed protein product [Passion fruit mosaic vir...   118   1e-25
YP_004465358.1 unnamed protein product [Passion fruit mosaic vir...   118   1e-25
AQN78274.1 126 kDa protein [Pepper mild mottle virus]                 118   1e-25
AOC37872.1 126 kDa protein [Pepper mild mottle virus]                 118   1e-25
AND76922.1 126 kDa replication-associated protein [Pepper mild m...   118   1e-25
BAF52938.1 130k replication protein [Pepper mild mottle virus] A...   118   1e-25
BAS32792.1 126 kDa protein [Pepper mild mottle virus]                 118   1e-25

>YP_009333242.1 RdRp [Beihai charybdis crab virus 1] APG77582.1 RdRp [Beihai
            charybdis crab virus 1]
          Length = 1920

 Score =  133 bits (334), Expect = 1e-30
 Identities = 99/289 (34%), Positives = 138/289 (47%), Gaps = 9/289 (3%)
 Frame = -3

Query: 1012 MKLIDGVPGCGKTHEIVSRFQAEDLITCAVRETAENTRKRVMSTYDWAQSSRIRTVDSCI 833
            + LI+GVPGCGKT+EI+   +  DL+    +E   +T KR+   +    +   RTVDS +
Sbjct: 1138 VSLIEGVPGCGKTYEIIHTAEPGDLVLTVSKEANVDTAKRIQEMH--GATVECRTVDSYL 1195

Query: 832  INKVPHAKTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRYP- 656
            +N       VF+DEGLM  PG +D V   ++C  L V+GD +QI F        I+R P 
Sbjct: 1196 LNSRKEYHRVFLDEGLMCHPGVIDLVAAYSRCAELLVYGDRSQIPF--------IVRVPG 1247

Query: 655  -RLTE-----WTDIEYRNVSVRVPADVCFAMRTLYPEWRRA--DIKTSNPIRRSVTVFHE 500
             R TE     +T IE RN S R P DV       Y +  R   + K S  ++   ++   
Sbjct: 1248 FRCTENVYSTFTSIEQRNTSRRCPQDVARLFTDQYKDGFRTTKECKRSLDVKFIGSISDI 1307

Query: 499  PNELHTMYTTAVPGTTVMTVTVKDKAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGM 320
            PN           GT  +T T  DKA + +                K   V T+HEAQG 
Sbjct: 1308 PNR---------EGTAYLTFTQDDKATLLK---------------SKFRNVHTIHEAQGK 1343

Query: 319  DVTHATVVRLDPFENPIFNSKPHMLVALTRHTHTLHVISVISKTEDPFS 173
                   VRL+     IF+S+PH+LVALTRHT   + + +  +  DP S
Sbjct: 1344 TYKSVVCVRLNTNNVQIFSSEPHILVALTRHTD--NFLYLTKRDNDPMS 1390


>YP_002455904.1 128 kDa [Cactus mild mottle virus] ABX57120.1 replicase [Cactus mild
            mottle virus]
          Length = 1142

 Score =  131 bits (329), Expect = 5e-30
 Identities = 94/277 (33%), Positives = 147/277 (53%), Gaps = 6/277 (2%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQ-AEDLITCAVRETAENTRKRVMSTYDW--AQSSRIRTVDSC 836
            LIDGVPGCGKT EI+ R   ++DL+    RE A+  R+R         A  S +RT+DS 
Sbjct: 845  LIDGVPGCGKTSEILRRCDFSKDLVLTPTREAAQMIRRRANEPRKQKIADESNVRTIDSF 904

Query: 835  IINKVPHA-KTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRY 659
            I+N  P   +TV++DEGLM+ PG V +  Q ++CT+L +FGD  QI FI R     +   
Sbjct: 905  IMNPKPIIYETVWIDEGLMVHPGLVWFCAQLSQCTTLNIFGDVKQIPFIPRVDNFDLPNE 964

Query: 658  PRLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSVTVFHEPNE-LHT 482
             +     +++ R+V+ R P DV   +   Y    + +I T++ + +SV     P +    
Sbjct: 965  LKSLTVDEVDSRDVTHRCPVDVTAWLAKTY----QRNITTTSSVDKSVEAALVPGKATFN 1020

Query: 481  MYTTAVPGTTVMTVTVKDKAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHAT 302
              T  +PG  ++T T  +K  + + G    + +T+ + G   + V TVHE QG       
Sbjct: 1021 AQTFPLPG-KILTFTQAEKQDLIKAGYNDVSTVTEFNVGS--SVVNTVHEIQGETYPVVN 1077

Query: 301  VVRLDPFENPIFN-SKPHMLVALTRHTHTLHVISVIS 194
            +VR +P    I + + PH++VAL+RHT      SV++
Sbjct: 1078 IVRCNPHPISIISRNSPHVVVALSRHTVKCKYFSVVA 1114


>YP_002455905.1 replicase [Cactus mild mottle virus]
          Length = 1649

 Score =  131 bits (329), Expect = 5e-30
 Identities = 94/277 (33%), Positives = 147/277 (53%), Gaps = 6/277 (2%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQ-AEDLITCAVRETAENTRKRVMSTYDW--AQSSRIRTVDSC 836
            LIDGVPGCGKT EI+ R   ++DL+    RE A+  R+R         A  S +RT+DS 
Sbjct: 845  LIDGVPGCGKTSEILRRCDFSKDLVLTPTREAAQMIRRRANEPRKQKIADESNVRTIDSF 904

Query: 835  IINKVPHA-KTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRY 659
            I+N  P   +TV++DEGLM+ PG V +  Q ++CT+L +FGD  QI FI R     +   
Sbjct: 905  IMNPKPIIYETVWIDEGLMVHPGLVWFCAQLSQCTTLNIFGDVKQIPFIPRVDNFDLPNE 964

Query: 658  PRLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSVTVFHEPNE-LHT 482
             +     +++ R+V+ R P DV   +   Y    + +I T++ + +SV     P +    
Sbjct: 965  LKSLTVDEVDSRDVTHRCPVDVTAWLAKTY----QRNITTTSSVDKSVEAALVPGKATFN 1020

Query: 481  MYTTAVPGTTVMTVTVKDKAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHAT 302
              T  +PG  ++T T  +K  + + G    + +T+ + G   + V TVHE QG       
Sbjct: 1021 AQTFPLPG-KILTFTQAEKQDLIKAGYNDVSTVTEFNVGS--SVVNTVHEIQGETYPVVN 1077

Query: 301  VVRLDPFENPIFN-SKPHMLVALTRHTHTLHVISVIS 194
            +VR +P    I + + PH++VAL+RHT      SV++
Sbjct: 1078 IVRCNPHPISIISRNSPHVVVALSRHTVKCKYFSVVA 1114


>APD13853.1 replication small protein [Plumeria mosaic virus]
          Length = 1152

 Score =  129 bits (323), Expect = 3e-29
 Identities = 91/274 (33%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQA-EDLITCAVRETAENTRKRVMSTYDWAQSSRIRTVDSCII 830
            L+DGVPGCGK+ EI+ R    EDL+ CA R  AE  R R+      A ++ +RT+DS ++
Sbjct: 869  LVDGVPGCGKSAEIIERCNLKEDLVLCAGRNAAEMLRGRLNKLGKGATNANVRTIDSFLM 928

Query: 829  NKVPHA-KTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRYPR 653
            N +P +  TV+VDEGLM+  G ++++   AK   + VFGD+ QI F++R          R
Sbjct: 929  NPMPVSFDTVWVDEGLMVHTGIINFIALFAKAKVINVFGDTKQIPFLNRVMDFDYPDELR 988

Query: 652  LTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSVTVFH-------EPN 494
                  +E R+V+ R P DV   +  +Y  +    + +S+ + RS+ V +       EP+
Sbjct: 989  TLVVDGVEMRSVTKRCPLDVTLQLNEVYKRY----VTSSSTVERSLEVKNLIGAAEFEPS 1044

Query: 493  ELHTMYTTAVPGTTVMTVTVKDKAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDV 314
                 +   +  T     T+K K                         V TVHE QG   
Sbjct: 1045 RYPEDFDQVIVFTQAEKQTLKKKG---------------------YKSVHTVHEVQGETF 1083

Query: 313  THATVVRLDPFENPIF-NSKPHMLVALTRHTHTL 215
                +VRLDP +  I     PH+LVAL+RHTH L
Sbjct: 1084 NKVALVRLDPTQLSIAEKGSPHLLVALSRHTHRL 1117


>APD13852.1 replicase large protein [Plumeria mosaic virus]
          Length = 1656

 Score =  129 bits (323), Expect = 3e-29
 Identities = 91/274 (33%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQA-EDLITCAVRETAENTRKRVMSTYDWAQSSRIRTVDSCII 830
            L+DGVPGCGK+ EI+ R    EDL+ CA R  AE  R R+      A ++ +RT+DS ++
Sbjct: 869  LVDGVPGCGKSAEIIERCNLKEDLVLCAGRNAAEMLRGRLNKLGKGATNANVRTIDSFLM 928

Query: 829  NKVPHA-KTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRYPR 653
            N +P +  TV+VDEGLM+  G ++++   AK   + VFGD+ QI F++R          R
Sbjct: 929  NPMPVSFDTVWVDEGLMVHTGIINFIALFAKAKVINVFGDTKQIPFLNRVMDFDYPDELR 988

Query: 652  LTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSVTVFH-------EPN 494
                  +E R+V+ R P DV   +  +Y  +    + +S+ + RS+ V +       EP+
Sbjct: 989  TLVVDGVEMRSVTKRCPLDVTLQLNEVYKRY----VTSSSTVERSLEVKNLIGAAEFEPS 1044

Query: 493  ELHTMYTTAVPGTTVMTVTVKDKAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDV 314
                 +   +  T     T+K K                         V TVHE QG   
Sbjct: 1045 RYPEDFDQVIVFTQAEKQTLKKKG---------------------YKSVHTVHEVQGETF 1083

Query: 313  THATVVRLDPFENPIF-NSKPHMLVALTRHTHTL 215
                +VRLDP +  I     PH+LVAL+RHTH L
Sbjct: 1084 NKVALVRLDPTQLSIAEKGSPHLLVALSRHTHRL 1117


>YP_762618.1 putative replicase [Streptocarpus flower break virus] CAJ13996.1
            putative replicase [Streptocarpus flower break virus]
          Length = 1105

 Score =  122 bits (305), Expect = 7e-27
 Identities = 93/275 (33%), Positives = 138/275 (50%), Gaps = 5/275 (1%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQ-AEDLITCAVRETAENTRKRVMST-YDWAQSSRIRTVDSCI 833
            L+DGVPGCGKT EI+ R    +DLI    +E ++   KR  +   + A    +RTVDS +
Sbjct: 817  LVDGVPGCGKTKEILERCDFTKDLILVPGKEASKMIIKRANAGGKNRANQDNVRTVDSFL 876

Query: 832  IN-KVPHAKTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRYP 656
            I+ K    K +F+DEGLML  G V+++   + C  + V+GD+ QI FI+R +      + 
Sbjct: 877  IHMKGTQVKRLFIDEGLMLHTGCVNFLALFSHCEEVLVYGDTHQIPFINRVANFPYPSHF 936

Query: 655  RLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSVTVFHEPNELHTMY 476
               ++  +E R V++R PADV   + + Y       +  ++ I RSV       +     
Sbjct: 937  AQLQYDSVEKRRVTLRCPADVTHHLNSQYD----GKVMCTSSILRSVECEVVRGKAVLNP 992

Query: 475  TTAVPGTTVMTVTVKDKAKIARLG-GFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHATV 299
             T      ++T T  DK ++   G G VD              V TVHE QG    H ++
Sbjct: 993  KTKPLSGKIITFTQSDKLELQNKGYGEVDV-----------LDVNTVHEIQGETYEHVSL 1041

Query: 298  VRLDPFENPIF-NSKPHMLVALTRHTHTLHVISVI 197
            VRL P    I  +  PH+LVALTRHT +L   +V+
Sbjct: 1042 VRLTPTPLEIVSHGSPHVLVALTRHTQSLKYYTVV 1076


>YP_762617.1 putative replicase [Streptocarpus flower break virus] CAJ13997.1
            putative replicase [Streptocarpus flower break virus]
          Length = 1606

 Score =  122 bits (305), Expect = 7e-27
 Identities = 93/275 (33%), Positives = 138/275 (50%), Gaps = 5/275 (1%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQ-AEDLITCAVRETAENTRKRVMST-YDWAQSSRIRTVDSCI 833
            L+DGVPGCGKT EI+ R    +DLI    +E ++   KR  +   + A    +RTVDS +
Sbjct: 817  LVDGVPGCGKTKEILERCDFTKDLILVPGKEASKMIIKRANAGGKNRANQDNVRTVDSFL 876

Query: 832  IN-KVPHAKTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRYP 656
            I+ K    K +F+DEGLML  G V+++   + C  + V+GD+ QI FI+R +      + 
Sbjct: 877  IHMKGTQVKRLFIDEGLMLHTGCVNFLALFSHCEEVLVYGDTHQIPFINRVANFPYPSHF 936

Query: 655  RLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSVTVFHEPNELHTMY 476
               ++  +E R V++R PADV   + + Y       +  ++ I RSV       +     
Sbjct: 937  AQLQYDSVEKRRVTLRCPADVTHHLNSQYD----GKVMCTSSILRSVECEVVRGKAVLNP 992

Query: 475  TTAVPGTTVMTVTVKDKAKIARLG-GFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHATV 299
             T      ++T T  DK ++   G G VD              V TVHE QG    H ++
Sbjct: 993  KTKPLSGKIITFTQSDKLELQNKGYGEVDV-----------LDVNTVHEIQGETYEHVSL 1041

Query: 298  VRLDPFENPIF-NSKPHMLVALTRHTHTLHVISVI 197
            VRL P    I  +  PH+LVALTRHT +L   +V+
Sbjct: 1042 VRLTPTPLEIVSHGSPHVLVALTRHTQSLKYYTVV 1076


>NP_620042.1 1a protein [Olive latent virus 2] Q83943.1 RecName: Full=Replication
            protein 1a; Includes: RecName: Full=ATP-dependent
            helicase; Includes: RecName: Full=Methyltransferase
            CAA64072.1 1a protein [Olive latent virus 2]
          Length = 908

 Score =  120 bits (301), Expect = 2e-26
 Identities = 90/274 (32%), Positives = 145/274 (52%), Gaps = 6/274 (2%)
 Frame = -3

Query: 1003 IDGVPGCGKTHEIVSR---FQAEDLITCAVRETAENTRKRVMSTYDWAQSSRIRTVDSCI 833
            IDGV GCGKT+EIV     F+ +DLI  A +++ E+   ++    D A+  RIRTVDS +
Sbjct: 629  IDGVAGCGKTYEIVHTADIFKKDDLILTANKKSQEDIFSQLKPGTDCAK--RIRTVDSYL 686

Query: 832  INKVPHAKTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRYPR 653
            +     AK +F+DE  ++ PG +    + A+C    +FGDS QI F++    L   ++ +
Sbjct: 687  LKPDVQAKRLFIDEAGLVHPGKLLAAMRFAECDDCLLFGDSEQIPFVNIVESLQPAKFLK 746

Query: 652  LTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSVTVFHEPNELHTMYT 473
            L E    E R  + R PADV   + TLY   ++  I T + + +SVT   +     +  +
Sbjct: 747  L-EVDAREVRETTYRCPADVTATLATLY---KKKKIVTKSKVLKSVT--SKSLASASAVS 800

Query: 472  TAVPGTTVMTVTVKDKAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHATVVR 293
               P +  +T+   DKA++ R+     A+  Q      +  + TVHEAQG+ V H  + R
Sbjct: 801  GLDPHSWHLTMYQADKAELVRV-----ARTNQMDDVWIKEHIKTVHEAQGISVPHVKLYR 855

Query: 292  LDPFENPIF---NSKPHMLVALTRHTHTLHVISV 200
               F+ P+F   +++ + LVA++RHT +   I V
Sbjct: 856  FKTFDQPLFDAAHAEAYRLVAISRHTQSFTYIGV 889


>YP_009345041.1 hypothetical protein [Xinzhou nematode virus 1] APG77854.1
            hypothetical protein [Xinzhou nematode virus 1]
          Length = 2708

 Score =  120 bits (300), Expect = 4e-26
 Identities = 95/298 (31%), Positives = 142/298 (47%), Gaps = 26/298 (8%)
 Frame = -3

Query: 1015 SMKLIDGVPGCGKTHEIVS--RFQAEDL---ITCAVRETAENTRKRVMSTYDWAQS---- 863
            ++ L++GVPGCGKT  IV+  +F  +DL   +  A RETAE+ RKRV   Y  ++     
Sbjct: 1830 TINLVEGVPGCGKTTYIVNNHKFAIDDLSDVVLTATRETAEDIRKRVCVAYSVSEDLPIL 1889

Query: 862  -SRIRTVDSCIIN---KVPHAKTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGF 695
              R RT+DS ++N   K     T+++DEGLM   G + +    +   ++ + GD AQI F
Sbjct: 1890 KKRYRTIDSFLVNFSSKDVGINTLWIDEGLMKHFGEIMWCVYLSGAKNVRICGDRAQIPF 1949

Query: 694  IDRGSKLGIL--RYPRLTEWTDIEYRNVSVRVPADVCFAMRTL--YPEWRRADIKTSNPI 527
            I+R   + +L  +   LT+   +E+   S R PADV   + +L  YP      + T N  
Sbjct: 1950 INRNGSISLLYSKMDALTKRFSVEFLQNSYRCPADVVCYLNSLGTYP----GKVSTINKT 2005

Query: 526  RRSVTVFHEPNELHTMYTTAVPGT--------TVMTVTVKDKAKIA-RLGGFVDAKMTQS 374
             RS+         H    T +            ++T T ++K ++   L      K    
Sbjct: 2006 MRSI---------HVQIVTGIADVPFLDFKRAVILTYTQREKQEVTLHLNKIFPGK---- 2052

Query: 373  STGDKRTKVLTVHEAQGMDVTHATVVRLDPFENPIFNSKPHMLVALTRHTHTLHVISV 200
               D    V T+HE QG       ++RL   E  I+NS  H LVALTRHTH+    +V
Sbjct: 2053 ---DVSYTVNTIHEYQGKQAADVVLIRLQMKEITIYNSVSHQLVALTRHTHSFTYYTV 2107


>ALU84939.1 128kDa replicase [Hibiscus latent Fort Pierce virus]
          Length = 1138

 Score =  119 bits (297), Expect = 8e-26
 Identities = 92/276 (33%), Positives = 136/276 (49%), Gaps = 6/276 (2%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQ-AEDLITCAVRETAENTRKRV--MSTYDWAQSSRIRTVDSC 836
            L+DGVPGCGKT EI+++    +DLI    ++ A+  RKR   +     A +S +RTVDS 
Sbjct: 854  LVDGVPGCGKTAEILAKANFKKDLILTQGKQAAQMIRKRANAIDCTKPANTSNVRTVDSF 913

Query: 835  IINKVPHA-KTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRY 659
            ++N  P    T+++DEGLML  G V+Y    + CT   ++GD+ QI FI+R        +
Sbjct: 914  LMNPKPFTYDTLWIDEGLMLHTGMVNYCVLLSHCTKCFIYGDTQQIPFINRVMNFDYPGH 973

Query: 658  PRLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSV-TVFHEPNELHT 482
             R     D E R ++ R P DV F +   Y    +  + +++ + RSV T F        
Sbjct: 974  LRTIVVDDTEKRRITSRCPLDVTFYLTQRY----KGPVMSTSSVTRSVETKFVAGPARFE 1029

Query: 481  MYTTAVPGTTVMTVTVKDKAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHAT 302
               T +PG  ++T T  DK  + + G                  V TVHE QG      +
Sbjct: 1030 PRATPLPG-KIVTFTQADKETLKKKG---------------YNDVHTVHEIQGETFNEVS 1073

Query: 301  VVRLDPFE-NPIFNSKPHMLVALTRHTHTLHVISVI 197
            +VRL     N I    PH+LV L+RHT+ L   +V+
Sbjct: 1074 LVRLTATPLNIISPESPHVLVGLSRHTNRLTYYTVV 1109


>YP_009094324.1 128 kDa replicase [Hibiscus latent Fort Pierce virus] ACI24010.1
            128kDa protein [Hibiscus latent Fort Pierce virus]
            BAP76307.1 128 kDa replicase [Hibiscus latent Fort Pierce
            virus]
          Length = 1138

 Score =  119 bits (297), Expect = 8e-26
 Identities = 92/276 (33%), Positives = 136/276 (49%), Gaps = 6/276 (2%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQ-AEDLITCAVRETAENTRKRV--MSTYDWAQSSRIRTVDSC 836
            L+DGVPGCGKT EI+++    +DLI    ++ A+  RKR   +     A +S +RTVDS 
Sbjct: 854  LVDGVPGCGKTAEILAKANFKKDLILTQGKQAAQMIRKRANAIDCTKPANTSNVRTVDSF 913

Query: 835  IINKVPHA-KTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRY 659
            ++N  P    T+++DEGLML  G V+Y    + CT   ++GD+ QI FI+R        +
Sbjct: 914  LMNPKPFTYDTLWIDEGLMLHTGMVNYCVLLSHCTKCFIYGDTQQIPFINRVMNFDYPGH 973

Query: 658  PRLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSV-TVFHEPNELHT 482
             R     D E R ++ R P DV F +   Y    +  + +++ + RSV T F        
Sbjct: 974  LRTIVVDDTEKRRITSRCPLDVTFYLTQRY----KGPVMSTSSVTRSVETKFVAGPARFE 1029

Query: 481  MYTTAVPGTTVMTVTVKDKAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHAT 302
               T +PG  ++T T  DK  + + G                  V TVHE QG      +
Sbjct: 1030 PRATPLPG-KIVTFTQADKETLKKKG---------------YNDVHTVHEIQGETFNEVS 1073

Query: 301  VVRLDPFE-NPIFNSKPHMLVALTRHTHTLHVISVI 197
            +VRL     N I    PH+LV L+RHT+ L   +V+
Sbjct: 1074 LVRLTATPLNIISPESPHVLVGLSRHTNRLTYYTVV 1109


>ALU84940.1 188 kDa polymerase [Hibiscus latent Fort Pierce virus]
          Length = 1646

 Score =  119 bits (297), Expect = 8e-26
 Identities = 92/276 (33%), Positives = 136/276 (49%), Gaps = 6/276 (2%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQ-AEDLITCAVRETAENTRKRV--MSTYDWAQSSRIRTVDSC 836
            L+DGVPGCGKT EI+++    +DLI    ++ A+  RKR   +     A +S +RTVDS 
Sbjct: 854  LVDGVPGCGKTAEILAKANFKKDLILTQGKQAAQMIRKRANAIDCTKPANTSNVRTVDSF 913

Query: 835  IINKVPHA-KTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRY 659
            ++N  P    T+++DEGLML  G V+Y    + CT   ++GD+ QI FI+R        +
Sbjct: 914  LMNPKPFTYDTLWIDEGLMLHTGMVNYCVLLSHCTKCFIYGDTQQIPFINRVMNFDYPGH 973

Query: 658  PRLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSV-TVFHEPNELHT 482
             R     D E R ++ R P DV F +   Y    +  + +++ + RSV T F        
Sbjct: 974  LRTIVVDDTEKRRITSRCPLDVTFYLTQRY----KGPVMSTSSVTRSVETKFVAGPARFE 1029

Query: 481  MYTTAVPGTTVMTVTVKDKAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHAT 302
               T +PG  ++T T  DK  + + G                  V TVHE QG      +
Sbjct: 1030 PRATPLPG-KIVTFTQADKETLKKKG---------------YNDVHTVHEIQGETFNEVS 1073

Query: 301  VVRLDPFE-NPIFNSKPHMLVALTRHTHTLHVISVI 197
            +VRL     N I    PH+LV L+RHT+ L   +V+
Sbjct: 1074 LVRLTATPLNIISPESPHVLVGLSRHTNRLTYYTVV 1109


>YP_009094908.1 187 kDa polymerase [Hibiscus latent Fort Pierce virus] ACI24009.1
            186kDa readthrough protein [Hibiscus latent Fort Pierce
            virus] BAP76306.1 187 kDa polymerase [Hibiscus latent
            Fort Pierce virus]
          Length = 1646

 Score =  119 bits (297), Expect = 8e-26
 Identities = 92/276 (33%), Positives = 136/276 (49%), Gaps = 6/276 (2%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQ-AEDLITCAVRETAENTRKRV--MSTYDWAQSSRIRTVDSC 836
            L+DGVPGCGKT EI+++    +DLI    ++ A+  RKR   +     A +S +RTVDS 
Sbjct: 854  LVDGVPGCGKTAEILAKANFKKDLILTQGKQAAQMIRKRANAIDCTKPANTSNVRTVDSF 913

Query: 835  IINKVPHA-KTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRY 659
            ++N  P    T+++DEGLML  G V+Y    + CT   ++GD+ QI FI+R        +
Sbjct: 914  LMNPKPFTYDTLWIDEGLMLHTGMVNYCVLLSHCTKCFIYGDTQQIPFINRVMNFDYPGH 973

Query: 658  PRLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSV-TVFHEPNELHT 482
             R     D E R ++ R P DV F +   Y    +  + +++ + RSV T F        
Sbjct: 974  LRTIVVDDTEKRRITSRCPLDVTFYLTQRY----KGPVMSTSSVTRSVETKFVAGPARFE 1029

Query: 481  MYTTAVPGTTVMTVTVKDKAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHAT 302
               T +PG  ++T T  DK  + + G                  V TVHE QG      +
Sbjct: 1030 PRATPLPG-KIVTFTQADKETLKKKG---------------YNDVHTVHEIQGETFNEVS 1073

Query: 301  VVRLDPFE-NPIFNSKPHMLVALTRHTHTLHVISVI 197
            +VRL     N I    PH+LV L+RHT+ L   +V+
Sbjct: 1074 LVRLTATPLNIISPESPHVLVGLSRHTNRLTYYTVV 1109


>YP_004465359.1 unnamed protein product [Passion fruit mosaic virus] AEF01558.1 125
            kDa protein [Passion fruit mosaic virus]
          Length = 1100

 Score =  118 bits (296), Expect = 1e-25
 Identities = 92/277 (33%), Positives = 135/277 (48%), Gaps = 7/277 (2%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQAE-DLITCAVRETAENTRKRVMSTY--DWAQSSRIRTVDSC 836
            L++GVPGCGKT EI+ R   + DLI    +E A   R+R  +    + A +  +RT DS 
Sbjct: 815  LVEGVPGCGKTKEILERCNFKSDLILTPGKEAAAMIRRRANNGLGAEHATTYNVRTFDSF 874

Query: 835  IINKVP-HAKTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRY 659
            +INK+P    TV+VDEGLM+  G + +      C  + V+GD+ QI FI+R         
Sbjct: 875  LINKIPVRFDTVWVDEGLMVHTGVIQFCRLKTNCKRMYVYGDTKQIPFINRVMTFDYPES 934

Query: 658  PRLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSV--TVFHEPNELH 485
             R  +   +E R+V+ R PAD+   + + Y    +  + T N  +RSV  T+      L 
Sbjct: 935  LRNLKLNSVETRSVTKRCPADITVFLNSQY----QCHVLTENHTQRSVEATLLKGAAVLQ 990

Query: 484  TMYTTAVPGTTVMTVTVKDKAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHA 305
               TT      ++  T  DKA + +  G++               V TVHE QG      
Sbjct: 991  PRQTTL--NGKIVVFTQADKA-LLKKNGYIG--------------VNTVHEVQGDTFEEV 1033

Query: 304  TVVRLDPFE-NPIFNSKPHMLVALTRHTHTLHVISVI 197
            ++VR  P     I    PH+LVAL+RHT  LH  +V+
Sbjct: 1034 SLVRATPTPVGIIAKDSPHVLVALSRHTSRLHYYTVV 1070


>YP_004465358.1 unnamed protein product [Passion fruit mosaic virus] AEF01559.1 184
            kDa protein [Passion fruit mosaic virus]
          Length = 1611

 Score =  118 bits (296), Expect = 1e-25
 Identities = 92/277 (33%), Positives = 135/277 (48%), Gaps = 7/277 (2%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQAE-DLITCAVRETAENTRKRVMSTY--DWAQSSRIRTVDSC 836
            L++GVPGCGKT EI+ R   + DLI    +E A   R+R  +    + A +  +RT DS 
Sbjct: 815  LVEGVPGCGKTKEILERCNFKSDLILTPGKEAAAMIRRRANNGLGAEHATTYNVRTFDSF 874

Query: 835  IINKVP-HAKTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILRY 659
            +INK+P    TV+VDEGLM+  G + +      C  + V+GD+ QI FI+R         
Sbjct: 875  LINKIPVRFDTVWVDEGLMVHTGVIQFCRLKTNCKRMYVYGDTKQIPFINRVMTFDYPES 934

Query: 658  PRLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSV--TVFHEPNELH 485
             R  +   +E R+V+ R PAD+   + + Y    +  + T N  +RSV  T+      L 
Sbjct: 935  LRNLKLNSVETRSVTKRCPADITVFLNSQY----QCHVLTENHTQRSVEATLLKGAAVLQ 990

Query: 484  TMYTTAVPGTTVMTVTVKDKAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHA 305
               TT      ++  T  DKA + +  G++               V TVHE QG      
Sbjct: 991  PRQTTL--NGKIVVFTQADKA-LLKKNGYIG--------------VNTVHEVQGDTFEEV 1033

Query: 304  TVVRLDPFE-NPIFNSKPHMLVALTRHTHTLHVISVI 197
            ++VR  P     I    PH+LVAL+RHT  LH  +V+
Sbjct: 1034 SLVRATPTPVGIIAKDSPHVLVALSRHTSRLHYYTVV 1070


>AQN78274.1 126 kDa protein [Pepper mild mottle virus]
          Length = 1117

 Score =  118 bits (295), Expect = 1e-25
 Identities = 91/277 (32%), Positives = 141/277 (50%), Gaps = 7/277 (2%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQA-EDLITCAVRETAENTRKRVMST-YDWAQSSRIRTVDSCI 833
            L+DGVPGCGKT EI+SR    EDL+    ++ AE  R+R  S+    A    +RTVDS +
Sbjct: 832  LVDGVPGCGKTKEILSRVNFDEDLVLVPGKQAAEMIRRRANSSGLIVATKENVRTVDSFL 891

Query: 832  IN--KVP-HAKTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILR 662
            +N  + P   K +F+DEGLML PG V+++   + C+   V+GD+ QI +I+R +     +
Sbjct: 892  MNYGRGPCQYKRLFLDEGLMLHPGCVNFLVGMSLCSEAFVYGDTQQIPYINRVATFPYPK 951

Query: 661  YPRLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSVTVFHEPNELHT 482
            +    E   +E R  ++R PAD+ F +   Y       +  ++ + RSV+  HE      
Sbjct: 952  HLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVS--HE------ 999

Query: 481  MYTTAVPGTTVMTVTVKD-KAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHA 305
                 + G  VM    K  K K+        + +      D    V TVHE QG      
Sbjct: 1000 ----VIQGAAVMNPVSKPLKGKVITFTQSDKSLLLSRGYED----VHTVHEVQGETFEDV 1051

Query: 304  TVVRLDPFENPIFNSK-PHMLVALTRHTHTLHVISVI 197
            ++VRL P    I + + PH+LV+L+RHT ++   +V+
Sbjct: 1052 SLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVV 1088


>AOC37872.1 126 kDa protein [Pepper mild mottle virus]
          Length = 1117

 Score =  118 bits (295), Expect = 1e-25
 Identities = 91/277 (32%), Positives = 141/277 (50%), Gaps = 7/277 (2%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQA-EDLITCAVRETAENTRKRVMST-YDWAQSSRIRTVDSCI 833
            L+DGVPGCGKT EI+SR    EDL+    ++ AE  R+R  S+    A    +RTVDS +
Sbjct: 832  LVDGVPGCGKTKEILSRVNFDEDLVLVPGKQAAEMIRRRANSSGLIVATKENVRTVDSFL 891

Query: 832  IN--KVP-HAKTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILR 662
            +N  + P   K +F+DEGLML PG V+++   + C+   V+GD+ QI +I+R +     +
Sbjct: 892  MNYGRGPCQYKRLFLDEGLMLHPGCVNFLVGMSLCSEAFVYGDTQQIPYINRVATFPYPK 951

Query: 661  YPRLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSVTVFHEPNELHT 482
            +    E   +E R  ++R PAD+ F +   Y       +  ++ + RSV+  HE      
Sbjct: 952  HLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVS--HE------ 999

Query: 481  MYTTAVPGTTVMTVTVKD-KAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHA 305
                 + G  VM    K  K K+        + +      D    V TVHE QG      
Sbjct: 1000 ----VIQGAAVMNPVSKPLKGKVITFTQSDKSLLLSRGYED----VHTVHEVQGETFEDV 1051

Query: 304  TVVRLDPFENPIFNSK-PHMLVALTRHTHTLHVISVI 197
            ++VRL P    I + + PH+LV+L+RHT ++   +V+
Sbjct: 1052 SLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVV 1088


>AND76922.1 126 kDa replication-associated protein [Pepper mild mottle virus]
          Length = 1117

 Score =  118 bits (295), Expect = 1e-25
 Identities = 91/277 (32%), Positives = 141/277 (50%), Gaps = 7/277 (2%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQA-EDLITCAVRETAENTRKRVMST-YDWAQSSRIRTVDSCI 833
            L+DGVPGCGKT EI+SR    EDL+    ++ AE  R+R  S+    A    +RTVDS +
Sbjct: 832  LVDGVPGCGKTKEILSRVNFDEDLVLVPGKQAAEMIRRRANSSGLIVATKENVRTVDSFL 891

Query: 832  IN--KVP-HAKTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILR 662
            +N  + P   K +F+DEGLML PG V+++   + C+   V+GD+ QI +I+R +     +
Sbjct: 892  MNYGRGPCQYKRLFLDEGLMLHPGCVNFLVGMSLCSEAFVYGDTQQIPYINRVATFPYPK 951

Query: 661  YPRLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSVTVFHEPNELHT 482
            +    E   +E R  ++R PAD+ F +   Y       +  ++ + RSV+  HE      
Sbjct: 952  HLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVS--HE------ 999

Query: 481  MYTTAVPGTTVMTVTVKD-KAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHA 305
                 + G  VM    K  K K+        + +      D    V TVHE QG      
Sbjct: 1000 ----VIQGAAVMNPVSKPLKGKVITFTQSDKSLLLSRGYED----VHTVHEVQGETFEDV 1051

Query: 304  TVVRLDPFENPIFNSK-PHMLVALTRHTHTLHVISVI 197
            ++VRL P    I + + PH+LV+L+RHT ++   +V+
Sbjct: 1052 SLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVV 1088


>BAF52938.1 130k replication protein [Pepper mild mottle virus] APG77804.1 183
            kDa protein [Pepper mild mottle virus]
          Length = 1117

 Score =  118 bits (295), Expect = 1e-25
 Identities = 91/277 (32%), Positives = 141/277 (50%), Gaps = 7/277 (2%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQA-EDLITCAVRETAENTRKRVMST-YDWAQSSRIRTVDSCI 833
            L+DGVPGCGKT EI+SR    EDL+    ++ AE  R+R  S+    A    +RTVDS +
Sbjct: 832  LVDGVPGCGKTKEILSRVNFDEDLVLVPGKQAAEMIRRRANSSGLIVATKENVRTVDSFL 891

Query: 832  IN--KVP-HAKTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILR 662
            +N  + P   K +F+DEGLML PG V+++   + C+   V+GD+ QI +I+R +     +
Sbjct: 892  MNYGRGPCQYKRLFLDEGLMLHPGCVNFLVGMSLCSEAFVYGDTQQIPYINRVATFPYPK 951

Query: 661  YPRLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSVTVFHEPNELHT 482
            +    E   +E R  ++R PAD+ F +   Y       +  ++ + RSV+  HE      
Sbjct: 952  HLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVS--HE------ 999

Query: 481  MYTTAVPGTTVMTVTVKD-KAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHA 305
                 + G  VM    K  K K+        + +      D    V TVHE QG      
Sbjct: 1000 ----VIQGAAVMNPVSKPLKGKVITFTQSDKSLLLSRGYED----VHTVHEVQGETFEDV 1051

Query: 304  TVVRLDPFENPIFNSK-PHMLVALTRHTHTLHVISVI 197
            ++VRL P    I + + PH+LV+L+RHT ++   +V+
Sbjct: 1052 SLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVV 1088


>BAS32792.1 126 kDa protein [Pepper mild mottle virus]
          Length = 1117

 Score =  118 bits (295), Expect = 1e-25
 Identities = 91/277 (32%), Positives = 141/277 (50%), Gaps = 7/277 (2%)
 Frame = -3

Query: 1006 LIDGVPGCGKTHEIVSRFQA-EDLITCAVRETAENTRKRVMST-YDWAQSSRIRTVDSCI 833
            L+DGVPGCGKT EI+SR    EDL+    ++ AE  R+R  S+    A    +RTVDS +
Sbjct: 832  LVDGVPGCGKTKEILSRVNFDEDLVLVPGKQAAEMIRRRANSSGLIVAAKENVRTVDSFL 891

Query: 832  IN--KVP-HAKTVFVDEGLMLLPGSVDYVGQSAKCTSLEVFGDSAQIGFIDRGSKLGILR 662
            +N  + P   K +F+DEGLML PG V+++   + C+   V+GD+ QI +I+R +     +
Sbjct: 892  MNYGRGPCQYKRLFLDEGLMLHPGCVNFLVGMSLCSEAFVYGDTQQIPYINRVATFPYPK 951

Query: 661  YPRLTEWTDIEYRNVSVRVPADVCFAMRTLYPEWRRADIKTSNPIRRSVTVFHEPNELHT 482
            +    E   +E R  ++R PAD+ F +   Y       +  ++ + RSV+  HE      
Sbjct: 952  HLSQLEVDAVETRRTTLRCPADITFFLNQKY----EGQVMCTSSVTRSVS--HE------ 999

Query: 481  MYTTAVPGTTVMTVTVKD-KAKIARLGGFVDAKMTQSSTGDKRTKVLTVHEAQGMDVTHA 305
                 + G  VM    K  K K+        + +      D    V TVHE QG      
Sbjct: 1000 ----VIQGAAVMNPVSKPLKGKVITFTQSDKSLLLSRGYED----VHTVHEVQGETFEDV 1051

Query: 304  TVVRLDPFENPIFNSK-PHMLVALTRHTHTLHVISVI 197
            ++VRL P    I + + PH+LV+L+RHT ++   +V+
Sbjct: 1052 SLVRLTPTPVGIISKQSPHLLVSLSRHTRSIKYYTVV 1088