BLASTX nr result

ID: Magnolia22_contig00021066 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00021066
         (455 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011461882.1 PREDICTED: probable 28S rRNA (cytosine-C(5))-meth...    55   7e-06
XP_011461880.1 PREDICTED: probable 28S rRNA (cytosine-C(5))-meth...    55   7e-06

>XP_011461882.1 PREDICTED: probable 28S rRNA (cytosine-C(5))-methyltransferase
           isoform X2 [Fragaria vesca subsp. vesca]
          Length = 530

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 26/42 (61%), Positives = 30/42 (71%)
 Frame = -3

Query: 189 GLSNPPRKTQKLCPEFLPRRAGRFDPARKMQNLNSEVSPHRA 64
           G  NP RKTQKL  E    R G+F+P+RK Q LNSE+SPHRA
Sbjct: 45  GNFNPSRKTQKLDSEVSTHRGGQFNPSRKTQKLNSEISPHRA 86


>XP_011461880.1 PREDICTED: probable 28S rRNA (cytosine-C(5))-methyltransferase
           isoform X1 [Fragaria vesca subsp. vesca] XP_011461881.1
           PREDICTED: probable 28S rRNA
           (cytosine-C(5))-methyltransferase isoform X1 [Fragaria
           vesca subsp. vesca]
          Length = 550

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 26/42 (61%), Positives = 30/42 (71%)
 Frame = -3

Query: 189 GLSNPPRKTQKLCPEFLPRRAGRFDPARKMQNLNSEVSPHRA 64
           G  NP RKTQKL  E    R G+F+P+RK Q LNSE+SPHRA
Sbjct: 45  GNFNPSRKTQKLDSEVSTHRGGQFNPSRKTQKLNSEISPHRA 86


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