BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00018800
         (1119 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010259314.1 PREDICTED: RNA pseudouridine synthase 1 [Nelumbo ...   405   e-137
XP_018847575.1 PREDICTED: RNA pseudouridine synthase 1-like [Jug...   389   e-131
XP_007205588.1 hypothetical protein PRUPE_ppa008866mg [Prunus pe...   381   e-129
ONI04288.1 hypothetical protein PRUPE_6G313700 [Prunus persica]       382   e-128
XP_008245928.2 PREDICTED: LOW QUALITY PROTEIN: RNA pseudouridine...   380   e-128
XP_009373279.1 PREDICTED: RNA pseudouridine synthase 1-like [Pyr...   377   e-127
OAY42390.1 hypothetical protein MANES_09G176400 [Manihot esculenta]   375   e-126
EOY11643.1 Pseudouridine synthase family protein isoform 2 [Theo...   375   e-126
KDO81689.1 hypothetical protein CISIN_1g018524mg [Citrus sinensi...   377   e-126
EOY11642.1 Pseudouridine synthase family protein isoform 1 [Theo...   375   e-126
XP_006433526.1 hypothetical protein CICLE_v10001637mg [Citrus cl...   375   e-126
XP_008359854.1 PREDICTED: RNA pseudouridine synthase 1-like [Mal...   375   e-126
XP_002512503.2 PREDICTED: RNA pseudouridine synthase 1 [Ricinus ...   375   e-126
EEF49955.1 ribosomal pseudouridine synthase, putative [Ricinus c...   373   e-125
XP_017977550.1 PREDICTED: RNA pseudouridine synthase 1 [Theobrom...   374   e-125
XP_006472187.2 PREDICTED: RNA pseudouridine synthase 1 [Citrus s...   373   e-125
XP_017626203.1 PREDICTED: RNA pseudouridine synthase 1 [Gossypiu...   369   e-124
XP_011466146.1 PREDICTED: RNA pseudouridine synthase 1 isoform X...   369   e-124
XP_016674566.1 PREDICTED: RNA pseudouridine synthase 1-like [Gos...   368   e-123
XP_011466144.1 PREDICTED: RNA pseudouridine synthase 1 isoform X...   369   e-123

>XP_010259314.1 PREDICTED: RNA pseudouridine synthase 1 [Nelumbo nucifera]
          Length = 402

 Score =  405 bits (1040), Expect = e-137
 Identities = 214/357 (59%), Positives = 258/357 (72%), Gaps = 3/357 (0%)
 Frame = +1

Query: 22   PYNSLLLTPSPRSIKSSAGRFLCRHSSLP--IMAEKSQFDSTEVG-PSNTSKTQNFXXXX 192
            PY   L   +P    S+A R LC  S  P  IMA +S  DS + G P+  +KT N+    
Sbjct: 44   PYLFFLRIKNPFK-PSTAVRSLCNISPPPNRIMAYRSHPDSAKEGDPNGENKTVNYPIPL 102

Query: 193  XXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPSGIYCESVLSSAHH 372
                  ISKQ+EL RAM+A             ++FEDE LIVVNKP GIYCESVL+S   
Sbjct: 103  SPPLPAISKQMELARAMSASSKSSLFSLSLSDVLFEDEWLIVVNKPQGIYCESVLASVPR 162

Query: 373  FLNESSLGSTDVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDHRVKKTY 552
              + S+  ST +  E  PLELHLANRLDRDTSG+M+ITKSHK+A KLVKAFTDH+V KTY
Sbjct: 163  LWSNSTDSST-LRNESNPLELHLANRLDRDTSGVMVITKSHKIAGKLVKAFTDHKVSKTY 221

Query: 553  LALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVVRDMATSFEIISVNR 732
            + LC+G  PKW+ I+IKSGHGRSKFG WRVYA+SDVGR+LPGGSVVRDMATSFE++SVN 
Sbjct: 222  VVLCIGAAPKWETISIKSGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMATSFEVLSVNG 281

Query: 733  QGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAYPKSGRTHQIRLHCQ 912
            QG+F+EPTK +  E    E  +VE++G++     D+   E+LIRAYPK+GRTHQIRLHCQ
Sbjct: 282  QGNFREPTKHTISEE---EFQLVEERGVSL--SNDDKKDEMLIRAYPKNGRTHQIRLHCQ 336

Query: 913  YLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEFRAPLPIWASEA 1083
            YL IPIRGDVKYEGVYEWRG  +D HALHAESL F HPVTG+P+E +APLP+WA +A
Sbjct: 337  YLRIPIRGDVKYEGVYEWRGQMFDGHALHAESLSFSHPVTGLPVEVKAPLPLWAEQA 393


>XP_018847575.1 PREDICTED: RNA pseudouridine synthase 1-like [Juglans regia]
          Length = 358

 Score =  389 bits (1000), Expect = e-131
 Identities = 207/361 (57%), Positives = 259/361 (71%), Gaps = 3/361 (0%)
 Frame = +1

Query: 19   LPYNSLLLTPSPRSIKSSAGRFLCRHSSLPIMAEKSQFDSTEVGPSNTSKT-QNFXXXXX 195
            LP  ++ L+  P+ +   +    C  ++ P M+  +Q D T+    NT +T QN+     
Sbjct: 10   LPSTTIFLSRFPKPLFPLS----CVTTAAPAMS--NQPDPTKPTSVNTLQTPQNYPVPLS 63

Query: 196  XXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPSGIYCESVLSSAHHF 375
                 ISK +EL RA +A             +V+EDE LI VNKP GIYCESVL+S    
Sbjct: 64   PPLPPISKSVELSRAESASSKSSLFALSRTHVVYEDEWLIAVNKPQGIYCESVLASVPQL 123

Query: 376  LNES--SLGSTDVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDHRVKKT 549
            L ++  S G    G +I   ELHLANRLDRDTSG+M+ITKSHKVA+KLV+AFT+H+V KT
Sbjct: 124  LCDAAESGGRLSEGTKIKSPELHLANRLDRDTSGVMLITKSHKVASKLVQAFTNHKVTKT 183

Query: 550  YLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVVRDMATSFEIISVN 729
            Y+A CVGP PKW+KI IKSGHGRSKFGVWRVYA+SDVGR LPGGSVVRDM TSFE++S+N
Sbjct: 184  YIAHCVGPAPKWEKITIKSGHGRSKFGVWRVYAASDVGRMLPGGSVVRDMETSFEVLSIN 243

Query: 730  RQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAYPKSGRTHQIRLHC 909
             QGSFKEP++F  DE     ++VVE++ +  I+ G + + EIL+RAYP+SGRTHQIRLHC
Sbjct: 244  GQGSFKEPSEFRKDEE---NTIVVEERAV--IDSGIKKD-EILVRAYPRSGRTHQIRLHC 297

Query: 910  QYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEFRAPLPIWASEACQ 1089
            QYLGI IRGDVKYEGVYEW+G  YD H LHAESL F+HPVTG+PI F+APLP+W S+A Q
Sbjct: 298  QYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPVTGLPIMFQAPLPLWPSQALQ 357

Query: 1090 E 1092
            +
Sbjct: 358  Q 358


>XP_007205588.1 hypothetical protein PRUPE_ppa008866mg [Prunus persica]
          Length = 316

 Score =  381 bits (978), Expect = e-129
 Identities = 190/322 (59%), Positives = 233/322 (72%), Gaps = 1/322 (0%)
 Frame = +1

Query: 127  QFDSTEVGPSNTSKT-QNFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFED 303
            QFD+      N  +T QN+          ISK IEL RAM+A             +VFED
Sbjct: 4    QFDAINPSSQNALQTSQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFED 63

Query: 304  ESLIVVNKPSGIYCESVLSSAHHFLNESSLGSTDVGIEITPLELHLANRLDRDTSGLMII 483
            + LIVVNKP G+YCESVL S    L +S+    + G     LELHLANRLDRDTSGLM+I
Sbjct: 64   QWLIVVNKPQGVYCESVLESVPQLLCDSA----ESGTPANQLELHLANRLDRDTSGLMVI 119

Query: 484  TKSHKVAAKLVKAFTDHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVG 663
            TKSHKVA+KLVKAFTDH++ KTY+A C+G  PKW++I +KSGHGRSKFG WRVYA+SDVG
Sbjct: 120  TKSHKVASKLVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVG 179

Query: 664  RSLPGGSVVRDMATSFEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDEN 843
            R+LPGGS+VRDM TSFE++S+N QGS KEP++F  DE     ++VV+++ +      D  
Sbjct: 180  RTLPGGSMVRDMETSFEVLSINGQGSLKEPSEFKKDE---ANTIVVQEKAVID---KDTK 233

Query: 844  NGEILIRAYPKSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDH 1023
              EIL+RA P+SGRTHQIRLHCQYLGI IRGDVKYEGVYEW+G  YD H LHAESL F+H
Sbjct: 234  KDEILVRARPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEH 293

Query: 1024 PVTGIPIEFRAPLPIWASEACQ 1089
            P+TG+P+ F+AP+P WAS+A Q
Sbjct: 294  PITGLPVMFQAPVPSWASQALQ 315


>ONI04288.1 hypothetical protein PRUPE_6G313700 [Prunus persica]
          Length = 366

 Score =  382 bits (980), Expect = e-128
 Identities = 201/364 (55%), Positives = 246/364 (67%), Gaps = 1/364 (0%)
 Frame = +1

Query: 1    PLFSRLLPYNSLLLTPSPRSIKSSAGRFLCRHSSLPIMAEKSQFDSTEVGPSNTSKT-QN 177
            PLFS         L P+       A  FL R S    +    QFD+      N  +T QN
Sbjct: 23   PLFS---------LQPATLFFTPKAFVFLSRSS----ITMSVQFDAINPSSQNALQTSQN 69

Query: 178  FXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPSGIYCESVL 357
            +          ISK IEL RAM+A             +VFED+ LIVVNKP G+YCESVL
Sbjct: 70   YPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFEDQWLIVVNKPQGVYCESVL 129

Query: 358  SSAHHFLNESSLGSTDVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDHR 537
             S    L +S+   +  G     LELHLANRLDRDTSGLM+ITKSHKVA+KLVKAFTDH+
Sbjct: 130  ESVPQLLCDSA--ESVAGTPANQLELHLANRLDRDTSGLMVITKSHKVASKLVKAFTDHK 187

Query: 538  VKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVVRDMATSFEI 717
            + KTY+A C+G  PKW++I +KSGHGRSKFG WRVYA+SDVGR+LPGGS+VRDM TSFE+
Sbjct: 188  ISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMVRDMETSFEV 247

Query: 718  ISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAYPKSGRTHQI 897
            +S+N QGS KEP++F  DE     ++VV+++ +      D    EIL+RA P+SGRTHQI
Sbjct: 248  LSINGQGSLKEPSEFKKDE---ANTIVVQEKAVID---KDTKKDEILVRARPRSGRTHQI 301

Query: 898  RLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEFRAPLPIWAS 1077
            RLHCQYLGI IRGDVKYEGVYEW+G  YD H LHAESL F+HP+TG+P+ F+AP+P WAS
Sbjct: 302  RLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGLPVMFQAPVPSWAS 361

Query: 1078 EACQ 1089
            +A Q
Sbjct: 362  QALQ 365


>XP_008245928.2 PREDICTED: LOW QUALITY PROTEIN: RNA pseudouridine synthase 1 [Prunus
            mume]
          Length = 349

 Score =  380 bits (975), Expect = e-128
 Identities = 199/359 (55%), Positives = 247/359 (68%), Gaps = 3/359 (0%)
 Frame = +1

Query: 22   PYNSLLLTPSPRSIKSSAGRFLCRHSSLPIMAEKSQFDSTEVGPSNTSK---TQNFXXXX 192
            P   L L P+       A  FL R SS+ +  +     S  + PS+ +    +QN+    
Sbjct: 4    PLPLLSLQPATLFFTPKAFXFLSR-SSITMSVQ-----SDAINPSSQNALQISQNYPVPL 57

Query: 193  XXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPSGIYCESVLSSAHH 372
                  ISK IEL RAM+A             +VFED+ LIVVNKP G+YCESVL S   
Sbjct: 58   SPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFEDQWLIVVNKPQGVYCESVLESVPQ 117

Query: 373  FLNESSLGSTDVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDHRVKKTY 552
             L +S+   +  G     LELHLANRLDRDTSGLM+ITKSHKVA+KLVKAFTDH++ KTY
Sbjct: 118  LLCDSA--ESVAGTPANQLELHLANRLDRDTSGLMVITKSHKVASKLVKAFTDHKISKTY 175

Query: 553  LALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVVRDMATSFEIISVNR 732
            +A C+G  PKW++I +KSGHGRSKFG WRVYA+SDVGR+LPGGS+VRDM TSFE++S+N 
Sbjct: 176  IARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMVRDMETSFEVLSING 235

Query: 733  QGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAYPKSGRTHQIRLHCQ 912
            QGS KEP++F  DE     +VVV+++ +      D    EIL+RA P+SGRTHQIRLHCQ
Sbjct: 236  QGSLKEPSEFKKDE---ANTVVVQEKAVID---KDTKKDEILVRARPRSGRTHQIRLHCQ 289

Query: 913  YLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEFRAPLPIWASEACQ 1089
            YLGI IRGDVKYEGVYEW+G  YD H LHAESL F+HP+TG+P+ F+AP+P WAS+A Q
Sbjct: 290  YLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGLPVMFQAPVPSWASQALQ 348


>XP_009373279.1 PREDICTED: RNA pseudouridine synthase 1-like [Pyrus x bretschneideri]
          Length = 349

 Score =  377 bits (968), Expect = e-127
 Identities = 199/358 (55%), Positives = 244/358 (68%), Gaps = 1/358 (0%)
 Frame = +1

Query: 19   LPYNSLLLTPSPRSIKSSAGRFLCRHSSLPIMAEKSQFDSTEVGPSNTSKTQ-NFXXXXX 195
            +P+   LL+P P ++  +   F+        M+  +  D+      +  +T  N+     
Sbjct: 1    MPFPRPLLSPQPPTVLFAPKAFVFLSRRRATMS--APHDAANPSSQDALQTPVNYPVPLS 58

Query: 196  XXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPSGIYCESVLSSAHHF 375
                 ISK IEL RAM+A             +V+EDE LIVVNKP G+YCESVL S    
Sbjct: 59   PPLPAISKHIELARAMSASSKSSLFSLSRNDVVYEDEWLIVVNKPQGVYCESVLESVPQL 118

Query: 376  LNESSLGSTDVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDHRVKKTYL 555
            L +S+    +        ELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDH+V KTY+
Sbjct: 119  LCDSAESVAET--PTNQPELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDHKVSKTYI 176

Query: 556  ALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVVRDMATSFEIISVNRQ 735
            A C+G  PKW++I +KSGHGRSKFG WRVYA+SDVGR+LPGGS+VRDM TSFEI+SVN Q
Sbjct: 177  ARCLGSAPKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMVRDMETSFEILSVNGQ 236

Query: 736  GSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAYPKSGRTHQIRLHCQY 915
            GS++EP++F  DE      VVVE++ +     GD    EIL+RA P SGRTHQIRLHCQY
Sbjct: 237  GSYEEPSEFKKDE---ANVVVVEEKAVID---GDAKKDEILVRARPMSGRTHQIRLHCQY 290

Query: 916  LGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEFRAPLPIWASEACQ 1089
            LGI IRGDVKYEGVYEW+G  YD+H LHAESL  +HPVTG+P+ FRAP+P WAS+A Q
Sbjct: 291  LGISIRGDVKYEGVYEWKGTTYDSHELHAESLSLEHPVTGLPVMFRAPVPSWASQALQ 348


>OAY42390.1 hypothetical protein MANES_09G176400 [Manihot esculenta]
          Length = 315

 Score =  375 bits (964), Expect = e-126
 Identities = 195/318 (61%), Positives = 229/318 (72%), Gaps = 1/318 (0%)
 Frame = +1

Query: 145  VGPSNTSKT-QNFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVV 321
            + P N   T QN+          ISKQIEL RAMTA             I++ED+ L+ V
Sbjct: 10   LAPQNAPLTVQNYPTPLSPPLPPISKQIELARAMTASSISSLFALSRSDILYEDQWLLAV 69

Query: 322  NKPSGIYCESVLSSAHHFLNESSLGSTDVGIEITPLELHLANRLDRDTSGLMIITKSHKV 501
            NKP GIYCE+VL S   FL + S  +       T  ELHLANRLDRDTSG+ +ITKSHKV
Sbjct: 70   NKPQGIYCEAVLESVPRFLADLSEEAKG-----TLPELHLANRLDRDTSGVTVITKSHKV 124

Query: 502  AAKLVKAFTDHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGG 681
            A+KLVKAFTDH+VKKTY+ALCVG  PKW+KI IKSGHGRSKFG WRVYA+SDVGR+LPGG
Sbjct: 125  ASKLVKAFTDHKVKKTYIALCVGSAPKWEKITIKSGHGRSKFGAWRVYAASDVGRTLPGG 184

Query: 682  SVVRDMATSFEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILI 861
            SVVRDM TSFE++SVN QG+FKE  +F  DEN     +VVE++    ++  D    EILI
Sbjct: 185  SVVRDMETSFELLSVNGQGNFKELREFEKDEN----VIVVEEKA---VKDADGKKDEILI 237

Query: 862  RAYPKSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIP 1041
            RA+P+SGRTHQIRLHCQYLGI IRGDVKYEGVYEW+   YD H LHAESL F+HP+TG+P
Sbjct: 238  RAFPQSGRTHQIRLHCQYLGISIRGDVKYEGVYEWKEKIYDGHELHAESLSFEHPITGLP 297

Query: 1042 IEFRAPLPIWASEACQEM 1095
            + F APLP WA EA Q +
Sbjct: 298  VMFCAPLPSWAKEAVQPL 315


>EOY11643.1 Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
          Length = 313

 Score =  375 bits (963), Expect = e-126
 Identities = 186/315 (59%), Positives = 229/315 (72%), Gaps = 1/315 (0%)
 Frame = +1

Query: 154  SNTSKTQNFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPS 333
            +N +  QN+          ISK IEL RAMTA             I++EDE LI VNKP 
Sbjct: 3    TNPNSHQNYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKPQ 62

Query: 334  GIYCESVLSSAHHFLNESSLGST-DVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAK 510
            GIYC+SVL+S   FL++S++      G + +P ELHLANRLDRDTSG+M+ITKSHKVAA 
Sbjct: 63   GIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDRDTSGIMVITKSHKVAAA 122

Query: 511  LVKAFTDHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVV 690
            LVKAFT+H V KTY+A C+G  PK ++I IKSGHGRSKFG WRVYA+ DVGR LPGGS+V
Sbjct: 123  LVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGGSIV 182

Query: 691  RDMATSFEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAY 870
            RDM T+FE++S+N Q S+KEP++   DE     SV+VE++ +  +   D    EIL+RA+
Sbjct: 183  RDMGTTFEVLSINGQQSYKEPSESVKDEE---TSVIVEEKAVIDV---DAQKDEILVRAF 236

Query: 871  PKSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEF 1050
            P+SGRTHQIRLHCQYLGIPIRGDVKYEGVYEW+G  YD H LHAESL F HPVTG P+  
Sbjct: 237  PRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSFQHPVTGFPVMI 296

Query: 1051 RAPLPIWASEACQEM 1095
            +APLP+WAS+A Q +
Sbjct: 297  QAPLPLWASQALQPL 311


>KDO81689.1 hypothetical protein CISIN_1g018524mg [Citrus sinensis] KDO81690.1
            hypothetical protein CISIN_1g018524mg [Citrus sinensis]
            KDO81691.1 hypothetical protein CISIN_1g018524mg [Citrus
            sinensis]
          Length = 354

 Score =  377 bits (967), Expect = e-126
 Identities = 193/327 (59%), Positives = 229/327 (70%), Gaps = 5/327 (1%)
 Frame = +1

Query: 124  SQFDSTEVGPSNTSKTQ-NFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFE 300
            S  + TE    N  +TQ N+          ISK IEL RAM+A             +++E
Sbjct: 30   SMSNPTEPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYE 89

Query: 301  DESLIVVNKPSGIYCESVLSSAHHFLN----ESSLGSTDVGIEITPLELHLANRLDRDTS 468
            DE L+ VNKP G+YCESVL+S    L     ES  G    G ++  LELHLANRLDRDTS
Sbjct: 90   DEWLVAVNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTS 149

Query: 469  GLMIITKSHKVAAKLVKAFTDHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYA 648
            G+M+ITKSHKVA+KLVKAFTDH+V KTY+ALC+GP PKW +I I SGHGRSKFG WRVYA
Sbjct: 150  GVMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYA 209

Query: 649  SSDVGRSLPGGSVVRDMATSFEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIE 828
            +SDVGR LPGGSVVRDM TSFE++SVN +GSFKEP++    E     ++VVE + +    
Sbjct: 210  ASDVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEHEE---NNIVVEKKAVLD-- 264

Query: 829  VGDENNGEILIRAYPKSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAES 1008
              D    EIL+RA+P+SGRTHQIRLHCQYLGI IRGDVKYEGVYEW G  YD H LHAES
Sbjct: 265  -ADAKKNEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAES 323

Query: 1009 LEFDHPVTGIPIEFRAPLPIWASEACQ 1089
            L FDHPVTG P+  +APLP+W +EA Q
Sbjct: 324  LSFDHPVTGCPVMVQAPLPLWGTEALQ 350


>EOY11642.1 Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 345

 Score =  375 bits (963), Expect = e-126
 Identities = 186/315 (59%), Positives = 229/315 (72%), Gaps = 1/315 (0%)
 Frame = +1

Query: 154  SNTSKTQNFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPS 333
            +N +  QN+          ISK IEL RAMTA             I++EDE LI VNKP 
Sbjct: 35   TNPNSHQNYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKPQ 94

Query: 334  GIYCESVLSSAHHFLNESSLGST-DVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAK 510
            GIYC+SVL+S   FL++S++      G + +P ELHLANRLDRDTSG+M+ITKSHKVAA 
Sbjct: 95   GIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDRDTSGIMVITKSHKVAAA 154

Query: 511  LVKAFTDHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVV 690
            LVKAFT+H V KTY+A C+G  PK ++I IKSGHGRSKFG WRVYA+ DVGR LPGGS+V
Sbjct: 155  LVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGGSIV 214

Query: 691  RDMATSFEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAY 870
            RDM T+FE++S+N Q S+KEP++   DE     SV+VE++ +  +   D    EIL+RA+
Sbjct: 215  RDMGTTFEVLSINGQQSYKEPSESVKDEE---TSVIVEEKAVIDV---DAQKDEILVRAF 268

Query: 871  PKSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEF 1050
            P+SGRTHQIRLHCQYLGIPIRGDVKYEGVYEW+G  YD H LHAESL F HPVTG P+  
Sbjct: 269  PRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSFQHPVTGFPVMI 328

Query: 1051 RAPLPIWASEACQEM 1095
            +APLP+WAS+A Q +
Sbjct: 329  QAPLPLWASQALQPL 343


>XP_006433526.1 hypothetical protein CICLE_v10001637mg [Citrus clementina]
            XP_006433527.1 hypothetical protein CICLE_v10001637mg
            [Citrus clementina] ESR46766.1 hypothetical protein
            CICLE_v10001637mg [Citrus clementina] ESR46767.1
            hypothetical protein CICLE_v10001637mg [Citrus
            clementina]
          Length = 357

 Score =  375 bits (963), Expect = e-126
 Identities = 188/310 (60%), Positives = 222/310 (71%), Gaps = 4/310 (1%)
 Frame = +1

Query: 172  QNFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPSGIYCES 351
            QN+          ISK IEL RAM+A             +++EDE  + VNKP G+YCES
Sbjct: 50   QNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEWFVAVNKPQGVYCES 109

Query: 352  VLSSAHHFLN----ESSLGSTDVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAKLVK 519
            VL+S   FL     ES  G    G ++  LELHLANRLDRDTSG+M+ITKSHKVA+KLVK
Sbjct: 110  VLASVPCFLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVITKSHKVASKLVK 169

Query: 520  AFTDHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVVRDM 699
            AFTDH+V KTY+ALC+GP PKW +I I SGHGRSKFG WRVYA+SDVGR LPGGSVVRDM
Sbjct: 170  AFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGGSVVRDM 229

Query: 700  ATSFEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAYPKS 879
             TSFE++SVN +GSFKEP++    E     ++VVE + +      D    EIL+RA+P+S
Sbjct: 230  VTSFEVLSVNGEGSFKEPSELQEHEE---NNIVVEKKAVLD---ADAKKNEILVRAFPRS 283

Query: 880  GRTHQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEFRAP 1059
            GRTHQIRLHCQYLGI IRGDVKYEGVYEW G  YD H LHAESL FDHPVTG P+  +AP
Sbjct: 284  GRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSFDHPVTGCPVMVQAP 343

Query: 1060 LPIWASEACQ 1089
            LP+W +EA Q
Sbjct: 344  LPLWGTEALQ 353


>XP_008359854.1 PREDICTED: RNA pseudouridine synthase 1-like [Malus domestica]
          Length = 349

 Score =  375 bits (962), Expect = e-126
 Identities = 198/358 (55%), Positives = 242/358 (67%), Gaps = 1/358 (0%)
 Frame = +1

Query: 19   LPYNSLLLTPSPRSIKSSAGRFLCRHSSLPIMAEKSQFDSTEVGPSNTSKTQ-NFXXXXX 195
            +P+   LL+P P  +  +   ++        M+  +Q D+         +T  N+     
Sbjct: 1    MPFPRPLLSPQPAMVLYAPKAYVFLSRRRXTMS--AQHDAANPSSQXALQTPGNYPVPLS 58

Query: 196  XXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPSGIYCESVLSSAHHF 375
                 ISK IEL RAM+A             +V+EDE LIVVNKP G+YCESVL S    
Sbjct: 59   PPLPAISKHIELARAMSASSKSGLFSLSRNDVVYEDEWLIVVNKPQGVYCESVLESVPQL 118

Query: 376  LNESSLGSTDVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDHRVKKTYL 555
            L +S+    +   +    ELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDH+V KTY+
Sbjct: 119  LCDSAESVAETRTKQP--ELHLANRLDRDTSGLMIITKSHKVAAKLVKAFTDHKVSKTYI 176

Query: 556  ALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVVRDMATSFEIISVNRQ 735
            A CVG  PKW++I +KSGHGRSKFG WRVYA+SDVGR+LPGGS+VRDM T FEI+S N Q
Sbjct: 177  ARCVGSAPKWERITLKSGHGRSKFGAWRVYAASDVGRTLPGGSMVRDMETXFEILSXNGQ 236

Query: 736  GSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAYPKSGRTHQIRLHCQY 915
            GS++EP++F  DE      VVVE++ +     GD    EIL+RA P+SGRTHQIRLHCQY
Sbjct: 237  GSYREPSEFKKDE---ANVVVVEEKAVID---GDAKKDEILVRARPRSGRTHQIRLHCQY 290

Query: 916  LGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEFRAPLPIWASEACQ 1089
            LGI IRGDVKYEGVYEW+G  YD H LHAESL  +HPVTG+P+ FRAP+P WAS+A Q
Sbjct: 291  LGISIRGDVKYEGVYEWKGTTYDGHELHAESLSLEHPVTGLPVMFRAPVPSWASQALQ 348


>XP_002512503.2 PREDICTED: RNA pseudouridine synthase 1 [Ricinus communis]
          Length = 361

 Score =  375 bits (963), Expect = e-126
 Identities = 203/370 (54%), Positives = 247/370 (66%), Gaps = 5/370 (1%)
 Frame = +1

Query: 1    PLFSRLLPYNSLLLTPSPRSIKSSAGR-FLC---RHSSLPIMAEKSQFDSTEVGPSNTSK 168
            PL S   P     L P+P   K S    F C   + SS P+ +     + T      T  
Sbjct: 2    PLLSSHSP-TLFFLAPNPLFSKFSKRTIFSCCIQQSSSNPMSSPPGNINPTSQNDPLT-- 58

Query: 169  TQNFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPSGIYCE 348
             QN+          ISKQIEL RA++A             +++ED+ LI VNKP G+YCE
Sbjct: 59   LQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAVNKPQGVYCE 118

Query: 349  SVLSSAHHFLNESS-LGSTDVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAKLVKAF 525
            +VL S    L  S+ L     G E  P E HLANRLDRDTSG+M+ITKSHKVA+KLVKAF
Sbjct: 119  TVLESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITKSHKVASKLVKAF 178

Query: 526  TDHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVVRDMAT 705
            TDH++KKTY+ALC+G  PKW+KI IKSGHGRSKFGVWRVYA+SDVG++LPGGS V+DM T
Sbjct: 179  TDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLPGGSTVKDMET 238

Query: 706  SFEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAYPKSGR 885
            SFE++SVN QGSFKE ++F  DEN     +VVE++     +V      EIL+RA+P+SGR
Sbjct: 239  SFELLSVNGQGSFKELSEFEKDEN----ILVVEEKAAKNADV---KKVEILVRAFPQSGR 291

Query: 886  THQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEFRAPLP 1065
            THQIRLHCQYLGI IRGDVKYEGVYEW G  YD H LHAE+L F+HPVTG+P+  RAPLP
Sbjct: 292  THQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVMLRAPLP 351

Query: 1066 IWASEACQEM 1095
             WA +A Q +
Sbjct: 352  SWAIQASQPL 361


>EEF49955.1 ribosomal pseudouridine synthase, putative [Ricinus communis]
          Length = 321

 Score =  373 bits (958), Expect = e-125
 Identities = 187/309 (60%), Positives = 226/309 (73%), Gaps = 1/309 (0%)
 Frame = +1

Query: 172  QNFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPSGIYCES 351
            QN+          ISKQIEL RA++A             +++ED+ LI VNKP G+YCE+
Sbjct: 20   QNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAVNKPQGVYCET 79

Query: 352  VLSSAHHFLNESS-LGSTDVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAKLVKAFT 528
            VL S    L  S+ L     G E  P E HLANRLDRDTSG+M+ITKSHKVA+KLVKAFT
Sbjct: 80   VLESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITKSHKVASKLVKAFT 139

Query: 529  DHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVVRDMATS 708
            DH++KKTY+ALC+G  PKW+KI IKSGHGRSKFGVWRVYA+SDVG++LPGGS V+DM TS
Sbjct: 140  DHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLPGGSTVKDMETS 199

Query: 709  FEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAYPKSGRT 888
            FE++SVN QGSFKE ++F  DEN     +VVE++     +V      EIL+RA+P+SGRT
Sbjct: 200  FELLSVNGQGSFKELSEFEKDEN----ILVVEEKAAKNADV---KKVEILVRAFPQSGRT 252

Query: 889  HQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEFRAPLPI 1068
            HQIRLHCQYLGI IRGDVKYEGVYEW G  YD H LHAE+L F+HPVTG+P+  RAPLP 
Sbjct: 253  HQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVMLRAPLPS 312

Query: 1069 WASEACQEM 1095
            WA +A Q +
Sbjct: 313  WAIQASQPL 321


>XP_017977550.1 PREDICTED: RNA pseudouridine synthase 1 [Theobroma cacao]
          Length = 345

 Score =  374 bits (960), Expect = e-125
 Identities = 185/315 (58%), Positives = 229/315 (72%), Gaps = 1/315 (0%)
 Frame = +1

Query: 154  SNTSKTQNFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPS 333
            +N +  QN+          ISK IEL RAMTA             I++EDE LI VNKP 
Sbjct: 35   TNPNSHQNYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKPQ 94

Query: 334  GIYCESVLSSAHHFLNESSLGST-DVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAK 510
            GIYC+SVL+S   FL++S++      G + +P ELHLANRLDRDTSG+M+ITKSHKVAA 
Sbjct: 95   GIYCDSVLASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDRDTSGIMVITKSHKVAAA 154

Query: 511  LVKAFTDHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVV 690
            LVKAFT+H V KTY+A C+G  PK ++I IKSGHGRSKFG WRVYA+ DVGR LPGGS+V
Sbjct: 155  LVKAFTNHMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGGSIV 214

Query: 691  RDMATSFEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAY 870
            RDM T+FE++S+N + S+KEP++   DE     SV+VE++ +  +   D    EIL+RA+
Sbjct: 215  RDMGTTFEVLSINGEQSYKEPSESVKDEE---TSVIVEEKAVIDV---DAKKDEILVRAF 268

Query: 871  PKSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEF 1050
            P+SGRTHQIRLHCQYLGIPIRGDVKYEGVYEW+G  YD H LHAESL F HPVTG P+  
Sbjct: 269  PRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSFQHPVTGFPVMI 328

Query: 1051 RAPLPIWASEACQEM 1095
            +APLP+WAS+A Q +
Sbjct: 329  QAPLPLWASQALQPL 343


>XP_006472187.2 PREDICTED: RNA pseudouridine synthase 1 [Citrus sinensis]
          Length = 354

 Score =  373 bits (958), Expect = e-125
 Identities = 190/327 (58%), Positives = 229/327 (70%), Gaps = 5/327 (1%)
 Frame = +1

Query: 124  SQFDSTEVGPSNTSKTQ-NFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFE 300
            S  + TE    N  +TQ N+          ISK IEL RAM+A             +++E
Sbjct: 30   SMSNPTEPTSQNAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYE 89

Query: 301  DESLIVVNKPSGIYCESVLSSAHHFLN----ESSLGSTDVGIEITPLELHLANRLDRDTS 468
            DE L+ VNKP G+YCESVL+S    L     ES  G    G ++  LELHLANRLDRDTS
Sbjct: 90   DEWLVAVNKPQGVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTS 149

Query: 469  GLMIITKSHKVAAKLVKAFTDHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYA 648
            G+M+ITKSHKVA+KLVKAFTDH+V KTY+ALC+GP PKW +I I SGHGRSKFG WRVYA
Sbjct: 150  GVMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYA 209

Query: 649  SSDVGRSLPGGSVVRDMATSFEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIE 828
            +SDVGR LPGGSVVRDM TSFE++SVN +GSFKEP++   DE     ++VVE + +    
Sbjct: 210  ASDVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEDEE---NNIVVEKKAVLD-- 264

Query: 829  VGDENNGEILIRAYPKSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAES 1008
              D    EIL+R +P+SGRTHQIRLHCQYLGI IRGDVKYEGVYEW G  YD H LHAES
Sbjct: 265  -ADAKKNEILVRVFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAES 323

Query: 1009 LEFDHPVTGIPIEFRAPLPIWASEACQ 1089
            L  +HP+TG P+  +APLP+WA++A Q
Sbjct: 324  LSLEHPITGCPVMVQAPLPLWATQAPQ 350


>XP_017626203.1 PREDICTED: RNA pseudouridine synthase 1 [Gossypium arboreum]
          Length = 313

 Score =  369 bits (946), Expect = e-124
 Identities = 181/313 (57%), Positives = 230/313 (73%), Gaps = 1/313 (0%)
 Frame = +1

Query: 154  SNTSKTQNFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPS 333
            SN++  QN+          ISK IEL RAM+A             I++EDE LI VNKP 
Sbjct: 3    SNSNSLQNYPTPLSPPLPSISKDIELARAMSASSKSSLFGLSRSDILYEDEWLIAVNKPQ 62

Query: 334  GIYCESVLSSAHHFLNESSLGST-DVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAK 510
            GIYC+++L+S   FL++S+       G + + LELHLANRLDRDTSG+M+ITKSHKVA+ 
Sbjct: 63   GIYCDTILASVPRFLSDSAPSDRLREGNQASTLELHLANRLDRDTSGVMVITKSHKVASV 122

Query: 511  LVKAFTDHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVV 690
            LVKAFT+H+V+KTY+A C+G  PK ++I IKSGHGRSKFG WRVYA+ DVGR LPGGS+V
Sbjct: 123  LVKAFTNHKVQKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGGSIV 182

Query: 691  RDMATSFEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAY 870
            RDM T+FE++S+N Q ++KE ++   DE     S+VVE++ +T +   D N  EIL+RA+
Sbjct: 183  RDMETTFEVLSINGQQNYKEQSECVKDEE---HSIVVEEKAITDV---DANKDEILVRAF 236

Query: 871  PKSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEF 1050
            P+SGRTHQIRLHCQYLG PIRGDVKYEGVYEW+G  YD H LHAESL F HP+TG P+  
Sbjct: 237  PRSGRTHQIRLHCQYLGFPIRGDVKYEGVYEWKGRTYDAHELHAESLTFQHPITGFPLLI 296

Query: 1051 RAPLPIWASEACQ 1089
            +APLP+WAS+A Q
Sbjct: 297  QAPLPLWASQALQ 309


>XP_011466146.1 PREDICTED: RNA pseudouridine synthase 1 isoform X3 [Fragaria vesca
            subsp. vesca]
          Length = 352

 Score =  369 bits (948), Expect = e-124
 Identities = 186/307 (60%), Positives = 225/307 (73%)
 Frame = +1

Query: 169  TQNFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPSGIYCE 348
            +QN+          ISK +EL RAM+A             +V+ED+ LIVVNKP GIYCE
Sbjct: 52   SQNYPVPLSPPLPLISKNMELARAMSASSKSSLFTLSRNDVVYEDQWLIVVNKPQGIYCE 111

Query: 349  SVLSSAHHFLNESSLGSTDVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAKLVKAFT 528
            +VL S    L ES+      G+E    E+HLANRLDRDTSG+MIITKSHKVAAKLVKAFT
Sbjct: 112  TVLESVPKLLAESA-----AGLEGKAPEIHLANRLDRDTSGVMIITKSHKVAAKLVKAFT 166

Query: 529  DHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVVRDMATS 708
            DH+V KTY+A C+G  PKW++I +KSGHGRSKFG WRVYA+SDVGR LPGGSVVRDM TS
Sbjct: 167  DHKVSKTYIACCIGSAPKWERITVKSGHGRSKFGAWRVYAASDVGRPLPGGSVVRDMETS 226

Query: 709  FEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAYPKSGRT 888
            FEI+S+N QG F+EP++F  D++   + +VVE++ +  I  GD    EIL+ A P+SGRT
Sbjct: 227  FEILSINGQGCFREPSEFRIDDD---KILVVEEKAV--IIDGDAKKDEILVIARPRSGRT 281

Query: 889  HQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEFRAPLPI 1068
            HQIRLHCQYLGI IRGDVKYEGVYEW+G  Y  H LHAES+  DHP+TG+PI FRAPLP 
Sbjct: 282  HQIRLHCQYLGISIRGDVKYEGVYEWKGTTYGGHELHAESMSLDHPITGLPILFRAPLPS 341

Query: 1069 WASEACQ 1089
            WA++  Q
Sbjct: 342  WANQLIQ 348


>XP_016674566.1 PREDICTED: RNA pseudouridine synthase 1-like [Gossypium hirsutum]
          Length = 349

 Score =  368 bits (945), Expect = e-123
 Identities = 181/313 (57%), Positives = 230/313 (73%), Gaps = 1/313 (0%)
 Frame = +1

Query: 154  SNTSKTQNFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPS 333
            SN++  QN+          ISK IEL RAM+A             I++EDE LI VNKP 
Sbjct: 39   SNSNSLQNYPTPLSPPLPSISKDIELARAMSASSKSSLFGLSRSDILYEDEWLIAVNKPQ 98

Query: 334  GIYCESVLSSAHHFLNESSLGSTDV-GIEITPLELHLANRLDRDTSGLMIITKSHKVAAK 510
            GIYC+++L+S   FL++S+       G + + LELHLANRLDRDTSG+M+ITKSHKVA+ 
Sbjct: 99   GIYCDTILASVPRFLSDSAPSDRLCEGNQASTLELHLANRLDRDTSGVMVITKSHKVASV 158

Query: 511  LVKAFTDHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVV 690
            LVKAFT+H+V+KTY+A C+G  PK ++I IKSGHGRSKFG WRVYA+ DVGR LPGGS+V
Sbjct: 159  LVKAFTNHKVQKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGGSIV 218

Query: 691  RDMATSFEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAY 870
            RDM T+FE++S+N Q ++KE ++   DE     S+VVE++ +T +   D N  EIL+RA+
Sbjct: 219  RDMETTFEVLSINGQQNYKEQSECVKDEE---HSIVVEEKAITDV---DANKDEILVRAF 272

Query: 871  PKSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEF 1050
            P+SGRTHQIRLHCQYLG PIRGDVKYEGVYEW+G  YD H LHAESL F HP+TG P+  
Sbjct: 273  PRSGRTHQIRLHCQYLGFPIRGDVKYEGVYEWKGRTYDAHELHAESLTFQHPITGFPLLI 332

Query: 1051 RAPLPIWASEACQ 1089
            +APLP+WAS+A Q
Sbjct: 333  QAPLPLWASQALQ 345


>XP_011466144.1 PREDICTED: RNA pseudouridine synthase 1 isoform X1 [Fragaria vesca
            subsp. vesca]
          Length = 375

 Score =  369 bits (946), Expect = e-123
 Identities = 185/307 (60%), Positives = 225/307 (73%)
 Frame = +1

Query: 169  TQNFXXXXXXXXXXISKQIELQRAMTAXXXXXXXXXXXXXIVFEDESLIVVNKPSGIYCE 348
            +QN+          ISK +EL RAM+A             +V+ED+ LIVVNKP GIYCE
Sbjct: 52   SQNYPVPLSPPLPLISKNMELARAMSASSKSSLFTLSRNDVVYEDQWLIVVNKPQGIYCE 111

Query: 349  SVLSSAHHFLNESSLGSTDVGIEITPLELHLANRLDRDTSGLMIITKSHKVAAKLVKAFT 528
            +VL S    L ES+      G+E    E+HLANRLDRDTSG+MIITKSHKVAAKLVKAFT
Sbjct: 112  TVLESVPKLLAESA-----AGLEGKAPEIHLANRLDRDTSGVMIITKSHKVAAKLVKAFT 166

Query: 529  DHRVKKTYLALCVGPTPKWDKINIKSGHGRSKFGVWRVYASSDVGRSLPGGSVVRDMATS 708
            DH+V KTY+A C+G  PKW++I +KSGHGRSKFG WRVYA+SDVGR LPGGSVVRDM TS
Sbjct: 167  DHKVSKTYIACCIGSAPKWERITVKSGHGRSKFGAWRVYAASDVGRPLPGGSVVRDMETS 226

Query: 709  FEIISVNRQGSFKEPTKFSTDENPGMESVVVEDQGMTRIEVGDENNGEILIRAYPKSGRT 888
            FEI+S+N QG F+EP++F  D++   + +VVE++ +  I  GD    EIL+ A P+SGRT
Sbjct: 227  FEILSINGQGCFREPSEFRIDDD---KILVVEEKAV--IIDGDAKKDEILVIARPRSGRT 281

Query: 889  HQIRLHCQYLGIPIRGDVKYEGVYEWRGNAYDTHALHAESLEFDHPVTGIPIEFRAPLPI 1068
            HQIRLHCQYLGI IRGDVKYEGVYEW+G  Y  H LHAES+  DHP+TG+PI FRAPLP 
Sbjct: 282  HQIRLHCQYLGISIRGDVKYEGVYEWKGTTYGGHELHAESMSLDHPITGLPILFRAPLPS 341

Query: 1069 WASEACQ 1089
            WA++  +
Sbjct: 342  WANQGAK 348