BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00012785
         (1545 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002282614.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   572   0.0  
XP_010271251.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   553   0.0  
XP_018827853.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   551   0.0  
GAV62308.1 PseudoU_synth_2 domain-containing protein [Cephalotus...   527   0.0  
XP_011624446.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   525   0.0  
ERN08832.1 hypothetical protein AMTR_s00015p00025410 [Amborella ...   521   e-179
XP_015892750.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   519   e-178
XP_006422925.1 hypothetical protein CICLE_v10028283mg [Citrus cl...   518   e-177
XP_010096290.1 RNA pseudourine synthase 4 [Morus notabilis] EXB6...   514   e-177
XP_018827854.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   510   e-176
XP_002313876.2 hypothetical protein POPTR_0009s09860g [Populus t...   513   e-176
OMO63274.1 Pseudouridine synthase, RsuA/RluB/C/D/E/F [Corchorus ...   512   e-175
EOX98365.1 Ribosomal pseudouridine synthase, putative [Theobroma...   512   e-175
XP_002518674.2 PREDICTED: RNA pseudouridine synthase 4, mitochon...   511   e-175
XP_007199810.1 hypothetical protein PRUPE_ppa004969mg [Prunus pe...   511   e-175
EEF43599.1 ribosomal pseudouridine synthase, putative [Ricinus c...   511   e-174
XP_011001179.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   508   e-174
XP_008236380.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   509   e-174
XP_007042534.2 PREDICTED: RNA pseudouridine synthase 4, mitochon...   507   e-174
XP_009341344.1 PREDICTED: RNA pseudouridine synthase 4, mitochon...   505   e-173

>XP_002282614.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
            [Vitis vinifera] CBI40257.3 unnamed protein product,
            partial [Vitis vinifera]
          Length = 476

 Score =  572 bits (1473), Expect = 0.0
 Identities = 284/381 (74%), Positives = 327/381 (85%), Gaps = 2/381 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQVQQHRLTRVSAKDAMNSGDR 1303
            LKWV+RCCPQLPR LVQKLFRLRQVRRES N   + +  Q Q+HRL RV+AKD MN GD+
Sbjct: 96   LKWVVRCCPQLPRSLVQKLFRLRQVRRESYNMITSDIGVQNQEHRLKRVAAKDLMNLGDQ 155

Query: 1302 IFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSLD 1123
            I LPITV+E+PSEK++Y CN++EIN++ +LELYKDPAIIVVNKPPGLPVQGGIGI +SLD
Sbjct: 156  ILLPITVEEFPSEKHEYHCNDEEINFVHNLELYKDPAIIVVNKPPGLPVQGGIGIKRSLD 215

Query: 1122 MLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGNA 943
             LAAT LRYD SEPPRLVHRLDRDSSGIL+MGRTQTSAT+LHSIFREKT GAS + +   
Sbjct: 216  ELAATYLRYDCSEPPRLVHRLDRDSSGILIMGRTQTSATILHSIFREKTFGASNNDIDTK 275

Query: 942  ERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYEV 763
            +RIL+R+YWALVIG+PRR +GLISAPL KVV+D+GKSERITIVD+ +  SSQHA+TEY V
Sbjct: 276  KRILQRRYWALVIGSPRRPRGLISAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRV 335

Query: 762  IKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWERE 583
            IKSS HGYTWLEL PLTGRKHQLRVHCAE LGTPIVGDYKYGWQ+HRK + +   N E+ 
Sbjct: 336  IKSSCHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKN 395

Query: 582  SAKHLTKRKL-PFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKLE 409
              ++L+ RK  PFGLDLESGSI +KQPHLHLHC+QM+LPNVSLALQ LQ S  CDLS+LE
Sbjct: 396  LDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMVLPNVSLALQNLQLSAECDLSELE 455

Query: 408  RINLVAPLPSHMQRSWDILSS 346
             +  VAPLPSHMQRSWDIL+S
Sbjct: 456  SLEFVAPLPSHMQRSWDILNS 476


>XP_010271251.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
            X1 [Nelumbo nucifera]
          Length = 472

 Score =  553 bits (1425), Expect = 0.0
 Identities = 281/397 (70%), Positives = 326/397 (82%), Gaps = 2/397 (0%)
 Frame = -1

Query: 1536 RPSDSTETEVDXXXXXXALKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAAC-LESQV 1360
            RPSD      +      ALKWVLRCCP LPR LVQKLFRLRQVRRES ++ ++  + +  
Sbjct: 77   RPSDLKGETTNTTTSTTALKWVLRCCPHLPRSLVQKLFRLRQVRRESCDSMSSLDIGNHA 136

Query: 1359 QQHRLTRVSAKDAMNSGDRIFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVV 1180
            Q+HRL RV+AK+ MN GDRIFLPITVQE PSE  ++ CNEDEI+YI SLELYKDPAII V
Sbjct: 137  QEHRLKRVTAKEVMNLGDRIFLPITVQELPSETQEHYCNEDEISYICSLELYKDPAIIAV 196

Query: 1179 NKPPGLPVQGGIGINKSLDMLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVL 1000
            NKP G+PVQGGIGI KSLD LAAT LRYDYSEPPRLVHRLDRDSSGILVMGRTQTSAT+L
Sbjct: 197  NKPHGMPVQGGIGIKKSLDELAATYLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATIL 256

Query: 999  HSIFREKTSGASFHAVGNAERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERIT 820
            HSIFREKT GAS +   N + IL+R+YWALVIGTP+RA GLISAPL KVV+D+GKSER+T
Sbjct: 257  HSIFREKTFGASIN--DNDKMILQRRYWALVIGTPKRANGLISAPLGKVVLDDGKSERMT 314

Query: 819  IVDDTKITSSQHALTEYEVIKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKY 640
            +  +    SSQHA+T+Y+V+KSS HGYTWLEL PLTGRKHQLRVHCAE LGTPIVGDYKY
Sbjct: 315  VDTNGNAISSQHAVTKYQVMKSSAHGYTWLELCPLTGRKHQLRVHCAEVLGTPIVGDYKY 374

Query: 639  GWQSHRKLEPMPCLNWERESAKHLTKRKLPFGLDLESGSISEKQPHLHLHCRQMLLPNVS 460
            GWQ+HRK +P+   N  +++ K    ++ PFGLD E GSI+EKQPHLHLHCRQM+ PN++
Sbjct: 375  GWQAHRKWKPLSWSN-PQKNKKLPRSKESPFGLDSEGGSIAEKQPHLHLHCRQMIFPNIA 433

Query: 459  LALQ-LQSSTHCDLSKLERINLVAPLPSHMQRSWDIL 352
            LALQ LQSS++CDLS+LE +NLVAPLP HMQRSW IL
Sbjct: 434  LALQHLQSSSNCDLSELESLNLVAPLPPHMQRSWGIL 470


>XP_018827853.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
            [Juglans regia]
          Length = 476

 Score =  551 bits (1420), Expect = 0.0
 Identities = 280/380 (73%), Positives = 325/380 (85%), Gaps = 3/380 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQVQQHR-LTRVSAKDAMNSGD 1306
            LKWVLRCCP LPR LVQKLFRLRQVRRES++  + C+++QVQQ R L RVSAKD+MN GD
Sbjct: 98   LKWVLRCCPDLPRSLVQKLFRLRQVRRESNDVGSTCVDAQVQQERRLKRVSAKDSMNVGD 157

Query: 1305 RIFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSL 1126
            RIFLPITVQE+P EK D  CNE+E N+++SL LYKDPAI+VVNKPPG+PVQGGIGI +SL
Sbjct: 158  RIFLPITVQEFPFEKQDCHCNEEEANFVRSLVLYKDPAIVVVNKPPGMPVQGGIGIKQSL 217

Query: 1125 DMLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGN 946
            D LAAT L Y+YSE PRLVHRLDRDSSGILVMGRTQTSA VLHSIFREKT GA    V N
Sbjct: 218  DGLAATCLTYNYSETPRLVHRLDRDSSGILVMGRTQTSAAVLHSIFREKTFGAK-DDVDN 276

Query: 945  AERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYE 766
              RILER+YWALVIG+PRR KGLIS PL KVV+DNGKS+RITIVD+ +  S+QHALT+Y+
Sbjct: 277  EVRILERRYWALVIGSPRRQKGLISVPLGKVVVDNGKSDRITIVDNAQNMSAQHALTKYQ 336

Query: 765  VIKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWER 586
            VIKSS +GYTWLEL PLTGRKHQLRVHCAE LGTPIVGD KYGWQ+H+KL+ +P  + ER
Sbjct: 337  VIKSSCYGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDLKYGWQAHKKLKHLPWPSLER 396

Query: 585  ESAKHLTKRK-LPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKL 412
            ES +++TK K +PFGLDL+SGSISEK P LHLHC+QM+LPNVS+ALQ +Q S+   LS++
Sbjct: 397  ESHENVTKGKTIPFGLDLQSGSISEKHPRLHLHCKQMVLPNVSMALQNVQFSSDYHLSQV 456

Query: 411  ERINLVAPLPSHMQRSWDIL 352
            E + LVAPLPS+MQRSWDIL
Sbjct: 457  ESLELVAPLPSYMQRSWDIL 476


>GAV62308.1 PseudoU_synth_2 domain-containing protein [Cephalotus follicularis]
          Length = 467

 Score =  527 bits (1358), Expect = 0.0
 Identities = 259/380 (68%), Positives = 313/380 (82%), Gaps = 1/380 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQVQQHRLTRVSAKDAMNSGDR 1303
            +KWVL+CCP+LPR LVQKLFRLRQVRR S++  ++ L +Q Q  +L RV+AKD +N GD+
Sbjct: 88   IKWVLKCCPELPRSLVQKLFRLRQVRRGSADGGSSDLGAQGQAPQLKRVAAKDLLNLGDQ 147

Query: 1302 IFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSLD 1123
            IFLPI+VQE PSEK +  C E+E+N+++SLELYKDPAIIVVNKP G+PVQGG+GI +SLD
Sbjct: 148  IFLPISVQELPSEKQECHCCEEEVNFVRSLELYKDPAIIVVNKPSGMPVQGGVGIKRSLD 207

Query: 1122 MLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGNA 943
             LAAT L YDYSEPPRLVHRLDRD SGILVMGRTQ SATVLHSIFREKT  AS   + N 
Sbjct: 208  ELAATCLSYDYSEPPRLVHRLDRDCSGILVMGRTQLSATVLHSIFREKTVDASKCEINNK 267

Query: 942  ERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYEV 763
            +RIL+R+YWALVIG+PRR KGL++APL KVV+DNGKS+RIT+VD  ++ SSQHA+TEY V
Sbjct: 268  KRILQRRYWALVIGSPRRTKGLVAAPLGKVVLDNGKSDRITVVDCAQMMSSQHAVTEYRV 327

Query: 762  IKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWERE 583
            I+SS+HGYTWLEL PLTGRKHQLRVHCAE LGTPIVGDYKYGWQ HRK +  P  + +  
Sbjct: 328  IQSSSHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQVHRKWKQFPFSDLKNS 387

Query: 582  SAKHLTKRKLPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKLER 406
            +     ++ LPFG+D+E GS+SEK P LHLHC+Q++LPNVS ALQ L +S+  DLS+L  
Sbjct: 388  NEDLCKEKTLPFGIDMERGSVSEKHPRLHLHCKQIILPNVSQALQNLLASSDYDLSELPS 447

Query: 405  INLVAPLPSHMQRSWDILSS 346
            I LVAP+P +MQRSWDIL S
Sbjct: 448  IELVAPMPPYMQRSWDILKS 467


>XP_011624446.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Amborella
            trichopoda]
          Length = 450

 Score =  525 bits (1352), Expect = 0.0
 Identities = 255/381 (66%), Positives = 314/381 (82%), Gaps = 2/381 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSN-ATAACLESQVQQHRLTRVSAKDAMNSGD 1306
            LKWVLRCCPQ+PR L+QKLFRLRQVR+ES N A A+CL  Q Q  ++ RV AKD +NSGD
Sbjct: 72   LKWVLRCCPQVPRSLIQKLFRLRQVRKESLNPAIASCLHKQAQYQQIKRVFAKDTLNSGD 131

Query: 1305 RIFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSL 1126
            RIFLPITV      ++DY+CN++E+ YI+SLE+YKD AI+VVNKPPGLPVQGG G+  SL
Sbjct: 132  RIFLPITVNPAVEVEDDYICNKEEMEYIRSLEVYKDAAIVVVNKPPGLPVQGGTGVKLSL 191

Query: 1125 DMLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGN 946
            D+L A+SL+YDYSE PRLVHRLD+DSSGILVMGRTQ S T+LHSIFR+KT GASF+ + N
Sbjct: 192  DVLVASSLKYDYSEVPRLVHRLDQDSSGILVMGRTQESTTLLHSIFRDKTCGASFNDIKN 251

Query: 945  AERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYE 766
            ++ IL+RKYWALVIG P+ ++GLISAPL+K+++D+GKSERIT+ +D+K  S++HA+TEY 
Sbjct: 252  SKIILKRKYWALVIGNPQPSEGLISAPLSKLLLDDGKSERITVSEDSKNKSARHAITEYR 311

Query: 765  VIKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWER 586
            V++SS HG+TWLEL P TGRKHQLRVHCAE LGTPI+GDYKYGW +HRK +P P L +E 
Sbjct: 312  VLRSSGHGFTWLELYPRTGRKHQLRVHCAEVLGTPILGDYKYGWNAHRKWKPFPTLKFEE 371

Query: 585  ESAKHLTKRKLPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKLE 409
                    RK PFGLDLE GS+S+K+P LHLHCRQM LPN+SLA Q L   +  DLSKLE
Sbjct: 372  R-----LNRKAPFGLDLEGGSVSDKKPRLHLHCRQMTLPNMSLAFQHLHEQSVDDLSKLE 426

Query: 408  RINLVAPLPSHMQRSWDILSS 346
            +++LVAPLP HM+RSWDIL+S
Sbjct: 427  KLDLVAPLPLHMRRSWDILNS 447


>ERN08832.1 hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
          Length = 457

 Score =  521 bits (1342), Expect = e-179
 Identities = 255/382 (66%), Positives = 314/382 (82%), Gaps = 3/382 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSN-ATAACLESQVQQHRLTRVSAKDAMNSGD 1306
            LKWVLRCCPQ+PR L+QKLFRLRQVR+ES N A A+CL  Q Q  ++ RV AKD +NSGD
Sbjct: 78   LKWVLRCCPQVPRSLIQKLFRLRQVRKESLNPAIASCLHKQAQYQQIKRVFAKDTLNSGD 137

Query: 1305 RIFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSL 1126
            RIFLPITV      ++DY+CN++E+ YI+SLE+YKD AI+VVNKPPGLPVQGG G+  SL
Sbjct: 138  RIFLPITVNPAVEVEDDYICNKEEMEYIRSLEVYKDAAIVVVNKPPGLPVQGGTGVKLSL 197

Query: 1125 DMLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHA-VG 949
            D+L A+SL+YDYSE PRLVHRLD+DSSGILVMGRTQ S T+LHSIFR+KT GASF+  + 
Sbjct: 198  DVLVASSLKYDYSEVPRLVHRLDQDSSGILVMGRTQESTTLLHSIFRDKTCGASFNVDIK 257

Query: 948  NAERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEY 769
            N++ IL+RKYWALVIG P+ ++GLISAPL+K+++D+GKSERIT+ +D+K  S++HA+TEY
Sbjct: 258  NSKIILKRKYWALVIGNPQPSEGLISAPLSKLLLDDGKSERITVSEDSKNKSARHAITEY 317

Query: 768  EVIKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWE 589
             V++SS HG+TWLEL P TGRKHQLRVHCAE LGTPI+GDYKYGW +HRK +P P L +E
Sbjct: 318  RVLRSSGHGFTWLELYPRTGRKHQLRVHCAEVLGTPILGDYKYGWNAHRKWKPFPTLKFE 377

Query: 588  RESAKHLTKRKLPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKL 412
                     RK PFGLDLE GS+S+K+P LHLHCRQM LPN+SLA Q L   +  DLSKL
Sbjct: 378  ER-----LNRKAPFGLDLEGGSVSDKKPRLHLHCRQMTLPNMSLAFQHLHEQSVDDLSKL 432

Query: 411  ERINLVAPLPSHMQRSWDILSS 346
            E+++LVAPLP HM+RSWDIL+S
Sbjct: 433  EKLDLVAPLPLHMRRSWDILNS 454


>XP_015892750.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Ziziphus
            jujuba]
          Length = 486

 Score =  519 bits (1337), Expect = e-178
 Identities = 254/380 (66%), Positives = 312/380 (82%), Gaps = 1/380 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQVQQHRLTRVSAKDAMNSGDR 1303
            LKWV+RCCP+LPR LVQKLFRLRQVRRES +   + +  ++Q+ RL RV    + N GDR
Sbjct: 108  LKWVVRCCPELPRSLVQKLFRLRQVRRESCDIGHSEMGDELQKPRLRRVITVFSYNLGDR 167

Query: 1302 IFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSLD 1123
            I+LPI+VQE+P +K +Y CNE+E+++I+SLELYKDPAIIVVNKPPG+PVQGGIGI +SLD
Sbjct: 168  IYLPISVQEFPVDKKEYHCNEEEVSFIRSLELYKDPAIIVVNKPPGMPVQGGIGIKRSLD 227

Query: 1122 MLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGNA 943
             LAAT L YD  EPPRLVHRLDRDSSGILVMGRTQTSATVLH+IFREKT GAS   + N 
Sbjct: 228  ELAATCLSYDCLEPPRLVHRLDRDSSGILVMGRTQTSATVLHTIFREKTFGASHDEIDNV 287

Query: 942  ERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYEV 763
            +RIL+R+YWALVIG+PR  KG ISAPL KVV+DNGKS+RIT++ +++  +SQHA+T+Y+V
Sbjct: 288  KRILQRRYWALVIGSPRHRKGFISAPLRKVVLDNGKSDRITVMHNSQTLASQHAITKYKV 347

Query: 762  IKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWERE 583
            I SS HGYTWLEL P+TGRKHQLRVHCAE LGTPI+GDYKYGWQ+H+  +P PC N E  
Sbjct: 348  IGSS-HGYTWLELSPITGRKHQLRVHCAEVLGTPILGDYKYGWQAHKNWKPFPCSNHENN 406

Query: 582  SAKHLTKRKLPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKLER 406
            S +   ++ LPFGLDL++G IS+K P LHLHC+QM+LP++SL LQ +Q  +  DLS LE 
Sbjct: 407  SNEVPKRKILPFGLDLDNGDISDKHPRLHLHCKQMVLPDISLVLQNVQLYSDYDLSHLES 466

Query: 405  INLVAPLPSHMQRSWDILSS 346
            I LVA LPSHMQRSW++ +S
Sbjct: 467  IKLVASLPSHMQRSWELTNS 486


>XP_006422925.1 hypothetical protein CICLE_v10028283mg [Citrus clementina] ESR36165.1
            hypothetical protein CICLE_v10028283mg [Citrus
            clementina]
          Length = 494

 Score =  518 bits (1333), Expect = e-177
 Identities = 261/381 (68%), Positives = 308/381 (80%), Gaps = 2/381 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQVQQHRLTRVSAKDAMNSGDR 1303
            LKWVL+CCP LPR  VQKLFRL QVRRES +  ++  E   Q+ +L RV+AKD++  GDR
Sbjct: 114  LKWVLQCCPGLPRNFVQKLFRLSQVRRESPSLDSSANEGHEQEIKLKRVAAKDSLKLGDR 173

Query: 1302 IFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSLD 1123
            IFLPI++QE PS K    C E+E+ +IQSLELYKD AIIV+NKP G+PVQGGIGI +S+D
Sbjct: 174  IFLPISIQESPSRKEKCPCTEEEVGFIQSLELYKDSAIIVINKPHGMPVQGGIGIRRSID 233

Query: 1122 MLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGNA 943
             LAAT L YDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKT  AS     N 
Sbjct: 234  ELAATCLTYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFSASKEDNDNE 293

Query: 942  ERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYEV 763
            +RIL+R YWALV+GTPR +KG+ISAPL KVV+DNGKS+RIT+V++ +I S+QHA+T Y+V
Sbjct: 294  KRILQRWYWALVVGTPRCSKGVISAPLRKVVVDNGKSDRITVVNNDQIMSAQHAVTRYQV 353

Query: 762  IKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWERE 583
            IK S HGYTWL+L PLTGRKHQLRVHCAE LGTPIVGDYKYGWQ+HRK +     +  ++
Sbjct: 354  IKPSCHGYTWLKLSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHRKWKQFHPSDLNKD 413

Query: 582  SAKHLTKRK-LPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKLE 409
            S     K K L FGLDLESGSI EKQP LHLHC++M LPNVS A+Q +Q S+ CD+SKLE
Sbjct: 414  SNDETPKEKTLHFGLDLESGSILEKQPGLHLHCKEMTLPNVSQAIQKVQLSSGCDVSKLE 473

Query: 408  RINLVAPLPSHMQRSWDILSS 346
             + LVAPLPSHMQRSWD+L+S
Sbjct: 474  SLKLVAPLPSHMQRSWDVLNS 494


>XP_010096290.1 RNA pseudourine synthase 4 [Morus notabilis] EXB63685.1 RNA
            pseudourine synthase 4 [Morus notabilis]
          Length = 470

 Score =  514 bits (1325), Expect = e-177
 Identities = 258/401 (64%), Positives = 313/401 (78%), Gaps = 2/401 (0%)
 Frame = -1

Query: 1542 GRRPSDSTETEVDXXXXXXALKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQ 1363
            G +  D    +        ALKWV+RCCP+LPR LVQKLFRLRQVRRES N        Q
Sbjct: 70   GAKDDDVKVLQASKSAATTALKWVVRCCPELPRSLVQKLFRLRQVRRESFNVEDCNAGDQ 129

Query: 1362 VQQHRLTRVSAKDAMNSGDRIFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIV 1183
            + + RL RVSAKD++N GD+IFLPI+V+E P EK +  CNE+E+ +I+SLELYKDPAI+V
Sbjct: 130  LGKPRLRRVSAKDSLNLGDKIFLPISVKELPVEKKECFCNEEEVKFIRSLELYKDPAIVV 189

Query: 1182 VNKPPGLPVQGGIGINKSLDMLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATV 1003
            VNKPPGLPVQGGIGI  SLD LA T L YDY+EPPRLVHRLDRD SGILVMGRTQTSATV
Sbjct: 190  VNKPPGLPVQGGIGIKTSLDQLAVTCLSYDYTEPPRLVHRLDRDCSGILVMGRTQTSATV 249

Query: 1002 LHSIFREKTSGASFHAVGNAERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERI 823
            LHSIFREKT GAS       + +L+R+YWA VIG+PR   GLISAPL KVV+DNGKS+RI
Sbjct: 250  LHSIFREKTFGASNDETVKGKIVLQRRYWAFVIGSPRHPNGLISAPLRKVVLDNGKSDRI 309

Query: 822  TIVDDTKITSSQHALTEYEVIKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYK 643
            T+V+ +   SSQHA+T+Y+VI SS+HGYTWLEL PLTGRKHQLRVHCAE LGTP+VGDYK
Sbjct: 310  TVVNGSHTLSSQHAITKYKVIGSSSHGYTWLELSPLTGRKHQLRVHCAEVLGTPMVGDYK 369

Query: 642  YGWQSHRKLEPMPCLNWERESAKHLTKRK-LPFGLDLESGSISEKQPHLHLHCRQMLLPN 466
            YGWQ+HR  +P+   + + +  + L KRK LPFGL++++GSISEK P LHLHC+QM+LPN
Sbjct: 370  YGWQAHRDWKPLHWPDPDNKCIEVLPKRKNLPFGLNMDNGSISEKHPRLHLHCKQMVLPN 429

Query: 465  VSLALQ-LQSSTHCDLSKLERINLVAPLPSHMQRSWDILSS 346
            +S  LQ +Q  +  +LS+LER+ L APLPS+MQRSW + +S
Sbjct: 430  ISHVLQNVQRYSDYELSRLERLKLDAPLPSYMQRSWHLTNS 470


>XP_018827854.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
            [Juglans regia]
          Length = 391

 Score =  510 bits (1314), Expect = e-176
 Identities = 263/369 (71%), Positives = 309/369 (83%), Gaps = 3/369 (0%)
 Frame = -1

Query: 1449 PRCLVQKLFRLRQVRRESSNATAACLESQVQQHR-LTRVSAKDAMNSGDRIFLPITVQEY 1273
            P+ L   L  L QVRRES++  + C+++QVQQ R L RVSAKD+MN GDRIFLPITVQE+
Sbjct: 24   PKLLPFTLSELFQVRRESNDVGSTCVDAQVQQERRLKRVSAKDSMNVGDRIFLPITVQEF 83

Query: 1272 PSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSLDMLAATSLRYD 1093
            P EK D  CNE+E N+++SL LYKDPAI+VVNKPPG+PVQGGIGI +SLD LAAT L Y+
Sbjct: 84   PFEKQDCHCNEEEANFVRSLVLYKDPAIVVVNKPPGMPVQGGIGIKQSLDGLAATCLTYN 143

Query: 1092 YSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGNAERILERKYWA 913
            YSE PRLVHRLDRDSSGILVMGRTQTSA VLHSIFREKT GA    V N  RILER+YWA
Sbjct: 144  YSETPRLVHRLDRDSSGILVMGRTQTSAAVLHSIFREKTFGAK-DDVDNEVRILERRYWA 202

Query: 912  LVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYEVIKSSNHGYTW 733
            LVIG+PRR KGLIS PL KVV+DNGKS+RITIVD+ +  S+QHALT+Y+VIKSS +GYTW
Sbjct: 203  LVIGSPRRQKGLISVPLGKVVVDNGKSDRITIVDNAQNMSAQHALTKYQVIKSSCYGYTW 262

Query: 732  LELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWERESAKHLTKRK- 556
            LEL PLTGRKHQLRVHCAE LGTPIVGD KYGWQ+H+KL+ +P  + ERES +++TK K 
Sbjct: 263  LELSPLTGRKHQLRVHCAEVLGTPIVGDLKYGWQAHKKLKHLPWPSLERESHENVTKGKT 322

Query: 555  LPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKLERINLVAPLPS 379
            +PFGLDL+SGSISEK P LHLHC+QM+LPNVS+ALQ +Q S+   LS++E + LVAPLPS
Sbjct: 323  IPFGLDLQSGSISEKHPRLHLHCKQMVLPNVSMALQNVQFSSDYHLSQVESLELVAPLPS 382

Query: 378  HMQRSWDIL 352
            +MQRSWDIL
Sbjct: 383  YMQRSWDIL 391


>XP_002313876.2 hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
            EEE87831.2 hypothetical protein POPTR_0009s09860g
            [Populus trichocarpa]
          Length = 471

 Score =  513 bits (1321), Expect = e-176
 Identities = 262/379 (69%), Positives = 309/379 (81%), Gaps = 2/379 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQVQQHRLTRVSAKDAMNSGDR 1303
            LKWVLRCCP+LPR LVQKLFRLRQVRRES    +  L  Q Q+HRL RV+AKD+M+ GDR
Sbjct: 92   LKWVLRCCPELPRNLVQKLFRLRQVRRESPVMESCNLGDQGQEHRLKRVAAKDSMDVGDR 151

Query: 1302 IFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSLD 1123
            IFLPI+V+  P+EK D  CNE+EIN+I+ LELYKD AIIVVNKPPG+PVQGGIGI +SLD
Sbjct: 152  IFLPISVKVLPAEKQDCHCNEEEINFIRGLELYKDAAIIVVNKPPGMPVQGGIGIKRSLD 211

Query: 1122 MLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGNA 943
             L+A+    DYSEPPRLVHRLDRD SGILVMGRTQTSATVLH+IFREKT  AS   VGN 
Sbjct: 212  ELSASCFSSDYSEPPRLVHRLDRDCSGILVMGRTQTSATVLHAIFREKTLAASNDDVGNK 271

Query: 942  ERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYEV 763
             RIL+RKYWALVIG+PRR KGLISAPL KVV+DNGKS+RIT+V++++  SSQHA+T+Y V
Sbjct: 272  RRILQRKYWALVIGSPRRPKGLISAPLGKVVVDNGKSDRITVVENSQNLSSQHAVTQYRV 331

Query: 762  IKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWERE 583
            I+SS HG+TWLEL PLTGRKHQLRVHCAE LGTPIVGDYKY WQ+HR  + +   N E  
Sbjct: 332  IESS-HGFTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYAWQAHRNWKQLQWSNIEDN 390

Query: 582  S-AKHLTKRKLPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKLE 409
            S  K L+++ LPF LDL+SGSISEK P LHLHC+QM+LP+VS ALQ +Q S+  D S+L 
Sbjct: 391  SNDKSLSEKILPFALDLDSGSISEKHPRLHLHCKQMVLPDVSKALQDVQLSSDYDFSQLA 450

Query: 408  RINLVAPLPSHMQRSWDIL 352
             +   APLP +M++SWDIL
Sbjct: 451  SLKFDAPLPPYMKKSWDIL 469


>OMO63274.1 Pseudouridine synthase, RsuA/RluB/C/D/E/F [Corchorus olitorius]
          Length = 476

 Score =  512 bits (1318), Expect = e-175
 Identities = 254/381 (66%), Positives = 309/381 (81%), Gaps = 2/381 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQVQQHRLTRVSAKDAMNSGDR 1303
            LKWV+RCCP+LPR LVQKLFRLRQVRRES     +    QVQ+ +L RV AKD++N GDR
Sbjct: 96   LKWVVRCCPELPRSLVQKLFRLRQVRRESHAIEVSEDGCQVQKVQLKRVGAKDSLNIGDR 155

Query: 1302 IFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSLD 1123
            IFLP +V+E+  EK +    E+E+ +IQSLELYKD AIIV+NKPPG+PVQGGIGI  SLD
Sbjct: 156  IFLPNSVREFSEEKQENGYTEEEVKFIQSLELYKDSAIIVLNKPPGMPVQGGIGIKWSLD 215

Query: 1122 MLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGNA 943
             LAA  L +DY EPPRLVHRLDRDSSGILVMGRTQ SA +LHSIFRE+T  +S H V N 
Sbjct: 216  ELAAACLCFDYPEPPRLVHRLDRDSSGILVMGRTQMSAAILHSIFREETISSSKHDVDNE 275

Query: 942  ERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYEV 763
            +R+L ++YWALVIG+PRR KG+I+APL KVV+D+GKS+RIT+ DDTKI SSQ A+TEY V
Sbjct: 276  KRVLRKRYWALVIGSPRRPKGMITAPLRKVVVDDGKSDRITVFDDTKIISSQRAITEYRV 335

Query: 762  IKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWERE 583
            IK+S HGYTW+EL PLTGRKHQLRVHCAE LGTPIVGDYKYGWQ+HRK + +P  +  ++
Sbjct: 336  IKTSTHGYTWIELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWQQLPDSDLTKK 395

Query: 582  SAKHLTKRK-LPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKLE 409
             ++  TK   LPFGL++  GSISEK P LHLHCR+M++PNVS AL+ +Q ST  DLSKL+
Sbjct: 396  PSEKFTKENMLPFGLNMNGGSISEKHPRLHLHCREMIVPNVSQALESMQLSTDYDLSKLK 455

Query: 408  RINLVAPLPSHMQRSWDILSS 346
             + +VAPLPS+MQ+SWDIL+S
Sbjct: 456  SLEVVAPLPSYMQKSWDILNS 476


>EOX98365.1 Ribosomal pseudouridine synthase, putative [Theobroma cacao]
          Length = 477

 Score =  512 bits (1318), Expect = e-175
 Identities = 255/381 (66%), Positives = 313/381 (82%), Gaps = 2/381 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQVQQHRLTRVSAKDAMNSGDR 1303
            +KWV+RCCP+LPR LVQKLFRLRQVRRES     A    QVQ  +L RV AKDA+N GDR
Sbjct: 97   VKWVMRCCPELPRSLVQKLFRLRQVRRESHVLEVAGDGCQVQTVQLKRVGAKDALNIGDR 156

Query: 1302 IFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSLD 1123
            IFLP +V+E+  EK +  C E+E+N+I+ LELYKDPAIIV+NKPPG+PVQGGIGI  SLD
Sbjct: 157  IFLPFSVREFREEKQESGCTEEELNFIRGLELYKDPAIIVLNKPPGMPVQGGIGIKWSLD 216

Query: 1122 MLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGNA 943
             LAA  L +DYSEPPRLVHRLDRDSSGILVMGRTQ SAT+LHS+FRE+T+ AS   V N 
Sbjct: 217  KLAAACLCFDYSEPPRLVHRLDRDSSGILVMGRTQMSATILHSVFREETNDASKDDVDNE 276

Query: 942  ERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYEV 763
            +RIL+++YWALVIG+PRR KG+I APL KVV+D+GKS+RIT+ D+++I SSQ A TEY+V
Sbjct: 277  KRILQKRYWALVIGSPRRPKGMIVAPLRKVVVDDGKSDRITVFDNSQIVSSQRAKTEYQV 336

Query: 762  IKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWERE 583
            IK+++HGYTWLEL PLTGRKHQLRVHCAE LGTPIVGDYKYGWQ+HR+ + +P  + ++ 
Sbjct: 337  IKTTSHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWQHLPESDLKKS 396

Query: 582  S-AKHLTKRKLPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKLE 409
            S  K   +  LPFGL+++SGSIS K+P LHLHCR+M+ PNVS ALQ LQ ST  DLSKL+
Sbjct: 397  SNDKCPEENMLPFGLNMDSGSISAKRPRLHLHCREMIFPNVSQALQNLQLSTDHDLSKLK 456

Query: 408  RINLVAPLPSHMQRSWDILSS 346
             + +VAPLPS+MQ+SWDI++S
Sbjct: 457  SLEVVAPLPSYMQKSWDIMNS 477


>XP_002518674.2 PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Ricinus
            communis]
          Length = 480

 Score =  511 bits (1316), Expect = e-175
 Identities = 261/381 (68%), Positives = 306/381 (80%), Gaps = 2/381 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQVQQHRLTRVSAKDAMNSGDR 1303
            LKWVLRCCP+LPR LVQKLFRLRQV+RE  N     +E     H+  RV+AKD MN GDR
Sbjct: 106  LKWVLRCCPELPRNLVQKLFRLRQVKRELLNVGDGEME-----HKTKRVAAKDLMNVGDR 160

Query: 1302 IFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSLD 1123
            IFLPI+VQ  P EK    C E E N+I+ LELYKD AIIVVNKPPG+PVQGGIGI  S D
Sbjct: 161  IFLPISVQALPFEKQKCHCGEKEANFIRGLELYKDEAIIVVNKPPGMPVQGGIGIKSSFD 220

Query: 1122 MLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGNA 943
             LAA+ L YDYSEPPRLVHRLDRDSSGILVMGRTQTS  VLHS+FREKT  AS H +G  
Sbjct: 221  ELAASCLSYDYSEPPRLVHRLDRDSSGILVMGRTQTSTMVLHSVFREKTFAASNHDIGER 280

Query: 942  ERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYEV 763
             RIL+RKYWALVIG+PRR KG+ISAPL KVV+D+GKS+RIT+V++ + TS QHA+T+Y V
Sbjct: 281  RRILQRKYWALVIGSPRRQKGIISAPLGKVVVDDGKSDRITVVENAESTSFQHAVTQYRV 340

Query: 762  IKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWERE 583
            ++SS HGY WLEL P+TGRKHQLRVHCAE LGTPIVGDYKYGWQ HRK + +P  N E+ 
Sbjct: 341  MESS-HGYAWLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQVHRKWKQLPFPNLEKI 399

Query: 582  SAKH-LTKRKLPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKLE 409
            S ++ L K+ LPFG+DLESGSISEK P LHLHC+QM+LP+VS AL+ +Q+S++ D S L+
Sbjct: 400  SNENALCKKILPFGIDLESGSISEKHPRLHLHCKQMVLPDVSQALRGVQTSSNYDFSDLK 459

Query: 408  RINLVAPLPSHMQRSWDILSS 346
             I L APLPS+MQRSWDIL+S
Sbjct: 460  SIELDAPLPSYMQRSWDILNS 480


>XP_007199810.1 hypothetical protein PRUPE_ppa004969mg [Prunus persica] ONH91758.1
            hypothetical protein PRUPE_8G135400 [Prunus persica]
          Length = 483

 Score =  511 bits (1315), Expect = e-175
 Identities = 263/409 (64%), Positives = 318/409 (77%), Gaps = 9/409 (2%)
 Frame = -1

Query: 1545 FGRRPSDSTETEVDXXXXXXALKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLES 1366
            +GR     T T         ALKWV RCCP+LPR LVQKLFRLRQVRRES +   +    
Sbjct: 75   YGRDVITKTATASTTSTTTTALKWVTRCCPELPRSLVQKLFRLRQVRRESCDMECSGEGV 134

Query: 1365 QVQQHRLTRVSAKDAMNSGDRIFLPITVQEYPSEKNDY-------LCNEDEINYIQSLEL 1207
            +  +  L RV+AKD+MN GDRI LP++VQE+P++K +         C+E+E+ +I+SLEL
Sbjct: 135  EALERPLKRVAAKDSMNVGDRIHLPLSVQEFPNDKQELPNDKKECYCSEEEVTFIRSLEL 194

Query: 1206 YKDPAIIVVNKPPGLPVQGGIGINKSLDMLAATSLRYDYSEPPRLVHRLDRDSSGILVMG 1027
            YKDPAIIV+NKPPG+PVQGGIGI +SLD LAA  L YD+SEPPRLVHRLDRDSSGILVMG
Sbjct: 195  YKDPAIIVINKPPGMPVQGGIGIKRSLDELAAACLSYDFSEPPRLVHRLDRDSSGILVMG 254

Query: 1026 RTQTSATVLHSIFREKTSGASFHAVGNAERILERKYWALVIGTPRRAKGLISAPLAKVVM 847
            RTQTSATVLHSIFREKT GAS   + +A+RIL+R+YWALVIG+PR+ KGLISAPL KVV+
Sbjct: 255  RTQTSATVLHSIFREKTFGASNDEIDDAKRILQRRYWALVIGSPRQRKGLISAPLGKVVV 314

Query: 846  DNGKSERITIVDDTKITSSQHALTEYEVIKSSNHGYTWLELRPLTGRKHQLRVHCAEALG 667
            DNGKS+RITIV+D++   SQHA+T+Y+VI S   GYTWLEL PLTGRKHQLRVHCAE L 
Sbjct: 315  DNGKSDRITIVNDSQTLPSQHAITKYKVIGSPCPGYTWLELTPLTGRKHQLRVHCAEVLR 374

Query: 666  TPIVGDYKYGWQSHRKLEPMPCLNWERESAKHLTKRK-LPFGLDLESGSISEKQPHLHLH 490
            TPIVGDYKYGWQ+HR  +P+   N E  S +   KRK LPF L++ESGS+SEK P LHLH
Sbjct: 375  TPIVGDYKYGWQTHRNWKPLAWSNNECHSDEEFPKRKNLPFDLNMESGSVSEKNPRLHLH 434

Query: 489  CRQMLLPNVSLALQ-LQSSTHCDLSKLERINLVAPLPSHMQRSWDILSS 346
            C+QM+LPNV+LALQ ++  +  DLS+LE + LVA LPS MQRSW+I +S
Sbjct: 435  CKQMVLPNVNLALQNVKLHSDSDLSELESLELVAALPSFMQRSWNITNS 483


>EEF43599.1 ribosomal pseudouridine synthase, putative [Ricinus communis]
          Length = 536

 Score =  511 bits (1316), Expect = e-174
 Identities = 261/381 (68%), Positives = 306/381 (80%), Gaps = 2/381 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQVQQHRLTRVSAKDAMNSGDR 1303
            LKWVLRCCP+LPR LVQKLFRLRQV+RE  N     +E     H+  RV+AKD MN GDR
Sbjct: 162  LKWVLRCCPELPRNLVQKLFRLRQVKRELLNVGDGEME-----HKTKRVAAKDLMNVGDR 216

Query: 1302 IFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSLD 1123
            IFLPI+VQ  P EK    C E E N+I+ LELYKD AIIVVNKPPG+PVQGGIGI  S D
Sbjct: 217  IFLPISVQALPFEKQKCHCGEKEANFIRGLELYKDEAIIVVNKPPGMPVQGGIGIKSSFD 276

Query: 1122 MLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGNA 943
             LAA+ L YDYSEPPRLVHRLDRDSSGILVMGRTQTS  VLHS+FREKT  AS H +G  
Sbjct: 277  ELAASCLSYDYSEPPRLVHRLDRDSSGILVMGRTQTSTMVLHSVFREKTFAASNHDIGER 336

Query: 942  ERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYEV 763
             RIL+RKYWALVIG+PRR KG+ISAPL KVV+D+GKS+RIT+V++ + TS QHA+T+Y V
Sbjct: 337  RRILQRKYWALVIGSPRRQKGIISAPLGKVVVDDGKSDRITVVENAESTSFQHAVTQYRV 396

Query: 762  IKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWERE 583
            ++SS HGY WLEL P+TGRKHQLRVHCAE LGTPIVGDYKYGWQ HRK + +P  N E+ 
Sbjct: 397  MESS-HGYAWLELSPITGRKHQLRVHCAEVLGTPIVGDYKYGWQVHRKWKQLPFPNLEKI 455

Query: 582  SAKH-LTKRKLPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKLE 409
            S ++ L K+ LPFG+DLESGSISEK P LHLHC+QM+LP+VS AL+ +Q+S++ D S L+
Sbjct: 456  SNENALCKKILPFGIDLESGSISEKHPRLHLHCKQMVLPDVSQALRGVQTSSNYDFSDLK 515

Query: 408  RINLVAPLPSHMQRSWDILSS 346
             I L APLPS+MQRSWDIL+S
Sbjct: 516  SIELDAPLPSYMQRSWDILNS 536


>XP_011001179.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
            [Populus euphratica]
          Length = 471

 Score =  508 bits (1309), Expect = e-174
 Identities = 259/379 (68%), Positives = 307/379 (81%), Gaps = 2/379 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQVQQHRLTRVSAKDAMNSGDR 1303
            LKWVLRCCP+LPR LVQKLFRLRQVRRESS   +  L  Q Q+HRL RV+AKD+M+ GDR
Sbjct: 92   LKWVLRCCPELPRNLVQKLFRLRQVRRESSVMESCNLGDQGQEHRLKRVAAKDSMDVGDR 151

Query: 1302 IFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSLD 1123
            IFLPI+V+  P+EK D  C+E+E N+I+ LELYKD AIIVVNKPPG+PVQGGIGI +SLD
Sbjct: 152  IFLPISVKALPAEKQDCHCSEEETNFIRGLELYKDDAIIVVNKPPGMPVQGGIGIKRSLD 211

Query: 1122 MLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGNA 943
             L+A+    DYSEPPRLVHRLDRD SGILVMGRTQTSATVLH+IFREKT  AS   VG+ 
Sbjct: 212  ELSASCFSSDYSEPPRLVHRLDRDCSGILVMGRTQTSATVLHAIFREKTLAASNDDVGDK 271

Query: 942  ERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYEV 763
             RIL+RKYWALVIG+PRR KGLISAPL KVV+DNGKS+RIT+V++++  SSQHA+T+Y V
Sbjct: 272  RRILQRKYWALVIGSPRRQKGLISAPLGKVVVDNGKSDRITVVENSQNLSSQHAVTQYRV 331

Query: 762  IKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWERE 583
            I+SS HG+TWLEL PLTGRKHQLRVHCAE LGTPIVGDYKY WQ+HR  + +P  N E  
Sbjct: 332  IESS-HGFTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYAWQAHRNWKQLPWSNIEDN 390

Query: 582  S-AKHLTKRKLPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKLE 409
            S  K  +++ LPF LDL+SG ISEK P LHLHC+QM+LP+VS ALQ +  S+  D S+L 
Sbjct: 391  SNEKSRSEKILPFALDLDSGGISEKHPRLHLHCKQMVLPDVSKALQDVHLSSDYDFSQLA 450

Query: 408  RINLVAPLPSHMQRSWDIL 352
             +   APLP +M+RSWDIL
Sbjct: 451  SLKFDAPLPPYMKRSWDIL 469


>XP_008236380.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Prunus mume]
          Length = 483

 Score =  509 bits (1310), Expect = e-174
 Identities = 263/409 (64%), Positives = 317/409 (77%), Gaps = 9/409 (2%)
 Frame = -1

Query: 1545 FGRRPSDSTETEVDXXXXXXALKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLES 1366
            +GR     T T         ALKWV RCCP+LPR LVQKLFRLRQVRRES +   +    
Sbjct: 75   YGRDVITKTATTSTTSTTTTALKWVTRCCPELPRSLVQKLFRLRQVRRESCDMECSGEGV 134

Query: 1365 QVQQHRLTRVSAKDAMNSGDRIFLPITVQEYPSEKNDYL-------CNEDEINYIQSLEL 1207
            +  +  L RV+AKD+MN GDRI LPI+VQE+P++K +         C+E+E+ +I+SLEL
Sbjct: 135  EALERPLKRVAAKDSMNVGDRIHLPISVQEFPNDKQELPNDKKECHCSEEEVTFIRSLEL 194

Query: 1206 YKDPAIIVVNKPPGLPVQGGIGINKSLDMLAATSLRYDYSEPPRLVHRLDRDSSGILVMG 1027
            YKDPAIIV+NKPPG+PVQGGIGI +SLD LAA  L YD+SE PRLVHRLDRDSSGILVMG
Sbjct: 195  YKDPAIIVINKPPGMPVQGGIGIKRSLDELAAACLSYDFSESPRLVHRLDRDSSGILVMG 254

Query: 1026 RTQTSATVLHSIFREKTSGASFHAVGNAERILERKYWALVIGTPRRAKGLISAPLAKVVM 847
            RTQTSATVLHSIFREKT GAS   + +A+RIL+R+YWALVIG+PR+ KGLISAPL KVV+
Sbjct: 255  RTQTSATVLHSIFREKTFGASNDVIDDAKRILQRRYWALVIGSPRQRKGLISAPLGKVVV 314

Query: 846  DNGKSERITIVDDTKITSSQHALTEYEVIKSSNHGYTWLELRPLTGRKHQLRVHCAEALG 667
            DNGKS+RITIV+D++   SQHA+T+Y+VI S   GYTWLEL PLTGRKHQLRVHCAE L 
Sbjct: 315  DNGKSDRITIVNDSQTLPSQHAITKYKVIGSPCPGYTWLELTPLTGRKHQLRVHCAEVLQ 374

Query: 666  TPIVGDYKYGWQSHRKLEPMPCLNWERESAKHLTKRK-LPFGLDLESGSISEKQPHLHLH 490
            TPIVGDYKYGWQ+HR  +P+   N E  S +   K K LPF L++ESGS+SEK P LHLH
Sbjct: 375  TPIVGDYKYGWQTHRNWKPLAWSNNECHSDEEFPKTKNLPFDLNMESGSVSEKNPRLHLH 434

Query: 489  CRQMLLPNVSLALQ-LQSSTHCDLSKLERINLVAPLPSHMQRSWDILSS 346
            C+QM+LPNV+LALQ ++  +  DLS+LE + LVAPLPS MQRSW+I +S
Sbjct: 435  CKQMVLPNVNLALQNVKLHSDSDLSELESLELVAPLPSFMQRSWNITNS 483


>XP_007042534.2 PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
            [Theobroma cacao]
          Length = 477

 Score =  507 bits (1306), Expect = e-174
 Identities = 253/381 (66%), Positives = 312/381 (81%), Gaps = 2/381 (0%)
 Frame = -1

Query: 1482 LKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQVQQHRLTRVSAKDAMNSGDR 1303
            +KWV+RCCP+LPR LVQKLFRLRQVRRES     A    QVQ  +L RV AKDA+N GDR
Sbjct: 97   VKWVMRCCPELPRSLVQKLFRLRQVRRESHVLEVAGDGCQVQTVQLKRVGAKDALNIGDR 156

Query: 1302 IFLPITVQEYPSEKNDYLCNEDEINYIQSLELYKDPAIIVVNKPPGLPVQGGIGINKSLD 1123
            IFLP +V+E+  EK +  C E+E+N+I+ LELYKDPAIIV+NKPPG+PVQGGIGI  SLD
Sbjct: 157  IFLPFSVREFREEKQESGCTEEELNFIRGLELYKDPAIIVLNKPPGMPVQGGIGIKWSLD 216

Query: 1122 MLAATSLRYDYSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTSGASFHAVGNA 943
             LAA  L +DYSEPPRLVHRLDRDSSGILVMGRTQ SAT+LHS+FRE+T+ AS   V N 
Sbjct: 217  KLAAACLCFDYSEPPRLVHRLDRDSSGILVMGRTQMSATILHSVFREETNDASKDDVDNE 276

Query: 942  ERILERKYWALVIGTPRRAKGLISAPLAKVVMDNGKSERITIVDDTKITSSQHALTEYEV 763
            +RIL+++YWALVIG+PRR KG+I APL +VV+D+GKS+RIT+ D+++I SSQ A TEY+V
Sbjct: 277  KRILQKRYWALVIGSPRRPKGMIVAPLRRVVVDDGKSDRITVFDNSQIVSSQRAKTEYQV 336

Query: 762  IKSSNHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWQSHRKLEPMPCLNWERE 583
            IK+++HG TWLEL PLTGRKHQLRVHCAE LGTPIVGDYKYGWQ+HR+ + +P  + ++ 
Sbjct: 337  IKTTSHGCTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWQHLPESDLKKS 396

Query: 582  S-AKHLTKRKLPFGLDLESGSISEKQPHLHLHCRQMLLPNVSLALQ-LQSSTHCDLSKLE 409
            S  K   +  LPFGL+++SGSIS K+P LHLHCR+M+ PNVS ALQ LQ ST  DLSKL+
Sbjct: 397  SNDKCPEENMLPFGLNMDSGSISAKRPRLHLHCREMIFPNVSQALQNLQLSTDHDLSKLK 456

Query: 408  RINLVAPLPSHMQRSWDILSS 346
             + +VAPLPS+MQ+SWDI++S
Sbjct: 457  SLEVVAPLPSYMQKSWDIMNS 477


>XP_009341344.1 PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like [Pyrus x
            bretschneideri]
          Length = 486

 Score =  505 bits (1301), Expect = e-173
 Identities = 261/408 (63%), Positives = 314/408 (76%), Gaps = 9/408 (2%)
 Frame = -1

Query: 1542 GRRPSDSTETEVDXXXXXXALKWVLRCCPQLPRCLVQKLFRLRQVRRESSNATAACLESQ 1363
            GR    +T +         ALKWV RCCP+LPR LVQKLFRLRQVRRES +  A     +
Sbjct: 83   GRGTITNTASAAADTTTTTALKWVTRCCPELPRSLVQKLFRLRQVRRESCSGQAV----E 138

Query: 1362 VQQHRLTRVSAKDAMNSGDRIFLPITVQEYPSEKN-------DYLCNEDEINYIQSLELY 1204
              +  L RV+AKD+MN GDRI LP +VQE+P++K+       +  C+E+EIN+I+SLELY
Sbjct: 139  AHERPLKRVAAKDSMNIGDRIHLPFSVQEFPADKHKSSNYKQECHCSEEEINFIRSLELY 198

Query: 1203 KDPAIIVVNKPPGLPVQGGIGINKSLDMLAATSLRYDYSEPPRLVHRLDRDSSGILVMGR 1024
            KDPAIIV+NKPPG+PVQGGIGI +SLD LA   L YD SEPPRLVHRLDRDSSG+LVMGR
Sbjct: 199  KDPAIIVINKPPGMPVQGGIGIKRSLDKLATACLSYDLSEPPRLVHRLDRDSSGLLVMGR 258

Query: 1023 TQTSATVLHSIFREKTSGASFHAVGNAERILERKYWALVIGTPRRAKGLISAPLAKVVMD 844
            TQT A VLHSIFREKT GAS     +A+RIL+R+YWALVIG+PR+ KGLISAPL KVV+D
Sbjct: 259  TQTIAAVLHSIFREKTVGASNDVTDDAKRILQRRYWALVIGSPRQRKGLISAPLVKVVVD 318

Query: 843  NGKSERITIVDDTKITSSQHALTEYEVIKSSNHGYTWLELRPLTGRKHQLRVHCAEALGT 664
            NGKSERIT  +D++  SSQHA+T+Y+VI SS  G+TWLEL PLTGRKHQLRVHCAE L T
Sbjct: 319  NGKSERITAANDSQTLSSQHAITKYKVIGSSCPGFTWLELTPLTGRKHQLRVHCAEVLRT 378

Query: 663  PIVGDYKYGWQSHRKLEPMPCLNWERESAKHL-TKRKLPFGLDLESGSISEKQPHLHLHC 487
            PIVGDYKYGWQ+HR  +P+   N E    + L  +R LPF L+++SGSI EK P LHLHC
Sbjct: 379  PIVGDYKYGWQTHRNWKPLSSSNTESHWNEELRPRRNLPFDLNMDSGSIFEKTPRLHLHC 438

Query: 486  RQMLLPNVSLALQ-LQSSTHCDLSKLERINLVAPLPSHMQRSWDILSS 346
            +QM+LPNV LALQ ++  + CDLS+LE + LVAPLPS+MQRSWDI +S
Sbjct: 439  KQMVLPNVYLALQNVKLHSDCDLSELESLELVAPLPSYMQRSWDITNS 486