BLASTX nr result

ID: Magnolia22_contig00010818 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00010818
         (567 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010256921.1 PREDICTED: serine/arginine-rich SC35-like splicin...    65   3e-09
XP_010108759.1 Serine/arginine-rich splicing factor 12 [Morus no...    62   5e-08
EOY18120.1 SC35-like splicing factor 30 isoform 3 [Theobroma cacao]    47   1e-07
XP_002283722.1 PREDICTED: serine/arginine-rich SC35-like splicin...    58   1e-06
CBI31687.3 unnamed protein product, partial [Vitis vinifera]           58   1e-06
ONK62242.1 uncharacterized protein A4U43_C07F1830 [Asparagus off...    56   5e-06
XP_009398753.1 PREDICTED: serine/arginine-rich SC35-like splicin...    55   9e-06

>XP_010256921.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30
           [Nelumbo nucifera] XP_010256922.1 PREDICTED:
           serine/arginine-rich SC35-like splicing factor SCL30
           [Nelumbo nucifera] XP_010256923.1 PREDICTED:
           serine/arginine-rich SC35-like splicing factor SCL30
           [Nelumbo nucifera]
          Length = 271

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 39/89 (43%), Positives = 46/89 (51%)
 Frame = -1

Query: 471 VSPGRRQGGHSRSPRDHVQGREEDHVRRRSYSPGYDNANRAEAENGYVERGPAYDGEDTX 292
           VSP RR G   RSPR+    R++DH+RRRSYSP YD A+R     GY E+  AY  E   
Sbjct: 184 VSPRRRHGDDPRSPRNPPPERDDDHLRRRSYSPHYDEADRNPGGKGYDEKS-AYADEAQA 242

Query: 291 XXXXXXXXXXXXXXXXXXXSADVSPRHSR 205
                              SAD+SPRHSR
Sbjct: 243 GWRSSPGRASRSPSGSRSRSADLSPRHSR 271


>XP_010108759.1 Serine/arginine-rich splicing factor 12 [Morus notabilis]
           EXC20173.1 Serine/arginine-rich splicing factor 12
           [Morus notabilis]
          Length = 408

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 44/121 (36%), Positives = 60/121 (49%)
 Frame = -2

Query: 563 VHALPATLQVHEFDTDQGPTLRLQDAELSSMFPRGEGKEAIPDPRGIMSKDERRIMSVED 384
           VHALPA  QV E DT  GP L LQ   L+++FP+ EG + I D +G+  + +  I+ V  
Sbjct: 288 VHALPAIPQVLEADTTHGPALLLQSGVLTTLFPQIEGMQTIQDLQGVFHESKMAIV-VVG 346

Query: 383 RTLQVTTMLTELKLRMATSRGVLHMTERIRVAVGDHQGVAQGRHRDRVRGLLTCHPGTAD 204
             L+V  M+     ++ T  G LH   R+R  +G H    Q  H D         PG A 
Sbjct: 347 HILRVLKMVLS---KIQTMMGNLHTRLRMRKDIGGHLVEHQYHHLD---------PGVAG 394

Query: 203 D 201
           D
Sbjct: 395 D 395


>EOY18120.1 SC35-like splicing factor 30 isoform 3 [Theobroma cacao]
          Length = 278

 Score = 47.4 bits (111), Expect(2) = 1e-07
 Identities = 26/47 (55%), Positives = 29/47 (61%)
 Frame = -1

Query: 471 VSPGRRQGGHSRSPRDHVQGREEDHVRRRSYSPGYDNANRAEAENGY 331
           VSPGRR   H RSPR   Q R+ D+   RSYSPGY+NA      NGY
Sbjct: 188 VSPGRRHADHPRSPRGPPQERDGDY-NHRSYSPGYENA----GGNGY 229



 Score = 35.8 bits (81), Expect(2) = 1e-07
 Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -2

Query: 323 GVLHMTERIRVAVGDHQGV-AQGRHRDRVRGLLTCHPGTAD 204
           G LHM+ R  V  G H+ V  QG      +GLLTCHPG AD
Sbjct: 230 GDLHMSPRKLVLHGGHRLVECQGPPLGPDQGLLTCHPGVAD 270


>XP_002283722.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30
           [Vitis vinifera] XP_010658584.1 PREDICTED:
           serine/arginine-rich SC35-like splicing factor SCL30
           [Vitis vinifera]
          Length = 276

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
 Frame = -1

Query: 471 VSPGRRQGGHSRSPRDHVQGREEDHVRRRSYSPGYDNA--NRAEAENGYVERGPAYDGED 298
           VSP RR+  H RSPRDH   R+ DH+ RRSYSPGYD+A        NGY+E+  AY+ ++
Sbjct: 187 VSP-RRRVEHPRSPRDHPPERDGDHI-RRSYSPGYDDAADQNHHTGNGYLEKS-AYEPDE 243

Query: 297 T--XXXXXXXXXXXXXXXXXXXXSADVSPRHSR 205
                                  SADVSPRHSR
Sbjct: 244 ARDRRRSPPPRRVSRSLSGSRSRSADVSPRHSR 276


>CBI31687.3 unnamed protein product, partial [Vitis vinifera]
          Length = 353

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
 Frame = -1

Query: 471 VSPGRRQGGHSRSPRDHVQGREEDHVRRRSYSPGYDNA--NRAEAENGYVERGPAYDGED 298
           VSP RR+  H RSPRDH   R+ DH+ RRSYSPGYD+A        NGY+E+  AY+ ++
Sbjct: 264 VSP-RRRVEHPRSPRDHPPERDGDHI-RRSYSPGYDDAADQNHHTGNGYLEKS-AYEPDE 320

Query: 297 T--XXXXXXXXXXXXXXXXXXXXSADVSPRHSR 205
                                  SADVSPRHSR
Sbjct: 321 ARDRRRSPPPRRVSRSLSGSRSRSADVSPRHSR 353


>ONK62242.1 uncharacterized protein A4U43_C07F1830 [Asparagus officinalis]
          Length = 262

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = -1

Query: 459 RRQGGHSRSPRDHVQGREEDHVRRRSYSPGYDNANRAEAENGYVER 322
           RR   H+RSPRD+ +GR+ED+  RRS SPGY NAN+ + +NG+ E+
Sbjct: 179 RRHSDHARSPRDYPEGRDEDY-NRRSRSPGYINANQNQPDNGHAEK 223


>XP_009398753.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30
           [Musa acuminata subsp. malaccensis] XP_018685145.1
           PREDICTED: serine/arginine-rich SC35-like splicing
           factor SCL30 [Musa acuminata subsp. malaccensis]
           XP_018685147.1 PREDICTED: serine/arginine-rich SC35-like
           splicing factor SCL30 [Musa acuminata subsp.
           malaccensis]
          Length = 268

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 34/87 (39%), Positives = 45/87 (51%)
 Frame = -1

Query: 468 SPGRRQGGHSRSPRDHVQGREEDHVRRRSYSPGYDNANRAEAENGYVERGPAYDGEDTXX 289
           SP ++Q  H+RSPR+H +   ED V RRS+SP Y +ANR E  N +  R P +D E +  
Sbjct: 182 SPRKKQSSHARSPRNHSKEHNED-VNRRSHSPSYSDANRNEDVNHHDNR-PPHDAEGSRS 239

Query: 288 XXXXXXXXXXXXXXXXXXSADVSPRHS 208
                             SAD+SPR S
Sbjct: 240 HWRSPRHSSASLPGSRSRSADLSPRRS 266


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